NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084030

Metagenome / Metatranscriptome Family F084030

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084030
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 49 residues
Representative Sequence VETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRSRADAGALFG
Number of Associated Samples 99
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 50.89 %
% of genes near scaffold ends (potentially truncated) 99.11 %
% of genes from short scaffolds (< 2000 bps) 92.86 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.536 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(20.536 % of family members)
Environment Ontology (ENVO) Unclassified
(36.607 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.107 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.69%    β-sheet: 0.00%    Coil/Unstructured: 42.31%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF00899ThiF 45.54
PF00581Rhodanese 41.07
PF03572Peptidase_S41 3.57
PF05237Obsolete Pfam Family 3.57
PF13180PDZ_2 0.89
PF04545Sigma70_r4 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0793C-terminal processing protease CtpA/Prc, contains a PDZ domainPosttranslational modification, protein turnover, chaperones [O] 3.57


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.54 %
UnclassifiedrootN/A4.46 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10164954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1152Open in IMG/M
3300005171|Ga0066677_10081465All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300005171|Ga0066677_10147282All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300005178|Ga0066688_10824122All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005180|Ga0066685_10519653All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300005180|Ga0066685_10569773All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300005295|Ga0065707_11116363All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300005330|Ga0070690_101434135All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005445|Ga0070708_101663242All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300005471|Ga0070698_100125998All Organisms → cellular organisms → Bacteria2518Open in IMG/M
3300005518|Ga0070699_100321152Not Available1392Open in IMG/M
3300005540|Ga0066697_10261758All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300005546|Ga0070696_100016843All Organisms → cellular organisms → Bacteria → Proteobacteria4929Open in IMG/M
3300005549|Ga0070704_102126983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi521Open in IMG/M
3300005555|Ga0066692_10138591All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300005559|Ga0066700_11031752All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300005577|Ga0068857_101672822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi622Open in IMG/M
3300005587|Ga0066654_10530603All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005598|Ga0066706_11033529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi631Open in IMG/M
3300005615|Ga0070702_100970265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi671Open in IMG/M
3300006034|Ga0066656_10489908All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300006058|Ga0075432_10276318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi690Open in IMG/M
3300006791|Ga0066653_10396441All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300006797|Ga0066659_11378320All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300006871|Ga0075434_101142656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium791Open in IMG/M
3300009012|Ga0066710_103149037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi636Open in IMG/M
3300009012|Ga0066710_104037789All Organisms → cellular organisms → Bacteria → Terrabacteria group549Open in IMG/M
3300009088|Ga0099830_10964150All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300009090|Ga0099827_10457089All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300009137|Ga0066709_101872879All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300009143|Ga0099792_10895929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium587Open in IMG/M
3300009147|Ga0114129_10466070All Organisms → cellular organisms → Bacteria1655Open in IMG/M
3300009147|Ga0114129_10692655All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300009162|Ga0075423_10087404All Organisms → cellular organisms → Bacteria3254Open in IMG/M
3300009162|Ga0075423_10203324All Organisms → cellular organisms → Bacteria2077Open in IMG/M
3300009162|Ga0075423_11165632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi822Open in IMG/M
3300010301|Ga0134070_10198577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi735Open in IMG/M
3300010304|Ga0134088_10595169All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300010320|Ga0134109_10467420All Organisms → cellular organisms → Bacteria → Terrabacteria group515Open in IMG/M
3300010323|Ga0134086_10288995All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300010326|Ga0134065_10087774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1015Open in IMG/M
3300010333|Ga0134080_10412340All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300010364|Ga0134066_10311429All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300011269|Ga0137392_11006644All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300011271|Ga0137393_10915085All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300011996|Ga0120156_1020654All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300012096|Ga0137389_10071602All Organisms → cellular organisms → Bacteria2683Open in IMG/M
3300012096|Ga0137389_10585188All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300012189|Ga0137388_10800696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi873Open in IMG/M
3300012199|Ga0137383_10665539All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300012199|Ga0137383_11363490All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012225|Ga0137434_1080524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium521Open in IMG/M
3300012354|Ga0137366_10974783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi591Open in IMG/M
3300012361|Ga0137360_10438574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1105Open in IMG/M
3300012362|Ga0137361_11074177All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300012363|Ga0137390_10995593All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300012532|Ga0137373_10387427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1088Open in IMG/M
3300012918|Ga0137396_11101992All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300012925|Ga0137419_10948917All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300012925|Ga0137419_11146687All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012927|Ga0137416_12138220All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300012977|Ga0134087_10329748All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300014031|Ga0120173_1000547All Organisms → cellular organisms → Bacteria4791Open in IMG/M
3300014150|Ga0134081_10082633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi994Open in IMG/M
3300014157|Ga0134078_10463357All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300015241|Ga0137418_10348939Not Available1222Open in IMG/M
3300015358|Ga0134089_10139924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi950Open in IMG/M
3300015373|Ga0132257_102148478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium722Open in IMG/M
3300017656|Ga0134112_10091571All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300017656|Ga0134112_10366042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi590Open in IMG/M
3300017659|Ga0134083_10195253All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300018061|Ga0184619_10320274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi709Open in IMG/M
3300018066|Ga0184617_1222734All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300018077|Ga0184633_10491506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi597Open in IMG/M
3300018082|Ga0184639_10522038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium595Open in IMG/M
3300018433|Ga0066667_11896086All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300019255|Ga0184643_1480717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi891Open in IMG/M
3300019885|Ga0193747_1056610All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300020004|Ga0193755_1124447All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300025167|Ga0209642_10211504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1116Open in IMG/M
3300025907|Ga0207645_10419028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi902Open in IMG/M
3300025918|Ga0207662_11367056Not Available503Open in IMG/M
3300025919|Ga0207657_11296071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium550Open in IMG/M
3300025981|Ga0207640_11201236All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300026297|Ga0209237_1149850All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300026301|Ga0209238_1279886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi502Open in IMG/M
3300026310|Ga0209239_1169867All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300026324|Ga0209470_1258892All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300026331|Ga0209267_1314434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi519Open in IMG/M
3300026528|Ga0209378_1057304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1854Open in IMG/M
3300026529|Ga0209806_1077222All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300026537|Ga0209157_1118168All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300026538|Ga0209056_10033579All Organisms → cellular organisms → Bacteria4803Open in IMG/M
3300026538|Ga0209056_10618287All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300026547|Ga0209156_10182208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1008Open in IMG/M
3300026550|Ga0209474_10338117All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300027378|Ga0209981_1007500Not Available1472Open in IMG/M
3300027480|Ga0208993_1036331All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300027655|Ga0209388_1010526All Organisms → cellular organisms → Bacteria2481Open in IMG/M
3300027738|Ga0208989_10091963All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300027787|Ga0209074_10471966Not Available539Open in IMG/M
3300027882|Ga0209590_10324836All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300028536|Ga0137415_10328526All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300028673|Ga0257175_1080462All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300028715|Ga0307313_10239685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium564Open in IMG/M
3300028719|Ga0307301_10078858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1032Open in IMG/M
3300028819|Ga0307296_10498657All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300028881|Ga0307277_10309444All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300028881|Ga0307277_10399261All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300031720|Ga0307469_10785333All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300032180|Ga0307471_100305405All Organisms → cellular organisms → Bacteria1680Open in IMG/M
3300032180|Ga0307471_100504822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1358Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil12.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.25%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.25%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.25%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.36%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.57%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.68%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.68%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.79%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.89%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011996Permafrost microbial communities from Nunavut, Canada - A39_65cm_12MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014031Permafrost microbial communities from Nunavut, Canada - A35_80cm_0.25MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027378Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1016495423300001661Forest SoilVETIYFDTLQFVYHLALAILVGGAVVLGAAAAPAIFAAVTSRGEAGAIF
Ga0066677_1008146533300005171SoilMETLTFDLIQFLYHLALAVLIGGSLVLGTAVAPALFASGRSRADAGTLFGSVLARFDGLAIFSV
Ga0066677_1014728213300005171SoilVETLYFDLLQFLYHFALVILVGGALVLGAAVAPALFATARSRAEAGTTFGGVLA
Ga0066688_1082412223300005178SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFGSAGSRG
Ga0066685_1051965313300005180SoilVETLSFDLLQFLYHLSLAILVGGSLVLGTAVAPALFASPRSRADAGTLFGSV
Ga0066685_1056977313300005180SoilVETLSFDLLQFLYHLALAILIGGSLVLGTAVAPALFTSARSRGEAGTLFGSVLARFDGLAIF
Ga0065707_1111636313300005295Switchgrass RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSH
Ga0070690_10143413523300005330Switchgrass RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRSRADAGTLFGSV
Ga0070708_10166324213300005445Corn, Switchgrass And Miscanthus RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRSRADAGTLFGSVLARFDGL
Ga0070698_10012599813300005471Corn, Switchgrass And Miscanthus RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFESTRSRADAG
Ga0070699_10032115223300005518Corn, Switchgrass And Miscanthus RhizosphereVETLYFDALQFVYHLALAILVGGAVVLGLAAAPAIFATVSSRGEAGAVFGAVLGRYDVLA
Ga0066697_1026175823300005540SoilVESLSFDLLQFLYHLSLAILVGGSLVLGTAVAPALFASRSRADAGTLFGSV
Ga0070696_10001684313300005546Corn, Switchgrass And Miscanthus RhizosphereMETLYFDTLQFVYHLALAILVGGAVVLGLAAAPAIFATVSSRGEAGAVFGAVLGRYDVLAVPCVFL
Ga0070704_10212698323300005549Corn, Switchgrass And Miscanthus RhizosphereMETLYFDALQFVYHLALAILVGGAVVLGLATAPAIFATVSSRGEAGA
Ga0066692_1013859133300005555SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALF
Ga0066700_1103175223300005559SoilVETLYTDILQFVYHLTLAILVGGALVLGSAAAPAIF
Ga0068857_10167282213300005577Corn RhizosphereMETLYFDTLQFVYHLALAILVGGAVVLGLAAAPAIFATVSSRGEAGAVFGAVLGRY
Ga0066654_1053060313300005587SoilVESLSFDLLQFLYHLSLAILVGGSLVLGTAVAPALFASRSRADAG
Ga0066706_1103352913300005598SoilVSRHDAQVETLYFDVLQFLYHLALAVLVGGAVVLGAAAAPAI
Ga0070702_10097026513300005615Corn, Switchgrass And Miscanthus RhizosphereVETLYFDALQFVYHLALAILVGGAVVLGLATAPAIFATVSSRGEAGAIFGAVLGR
Ga0066656_1048990813300006034SoilMETLAFDLLQFLYHLALAIVVGGSLVLGSVVAPALFASARSRAEAGTLFGTMLARFDG
Ga0075432_1027631813300006058Populus RhizosphereMETLYFDTLQFVYHLALAILVGGAVVLGLAAAPAIFASVSSRGEAGTIFGAVL
Ga0066653_1039644113300006791SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRTSADAGTLFGSVLARFDG
Ga0066659_1137832013300006797SoilMETLTFDLIQFLYHLALAVLIGGSLVLGTAVAPALFSSGRSRA
Ga0075434_10114265623300006871Populus RhizosphereVETLYFDTLQFLYHLALAIVVGGALVLGAAAAPAIFAAVRSR
Ga0066710_10314903713300009012Grasslands SoilVETLYFDVLQFLYHLALAILVGGALMLGTSVAPALFTTARSRAEAGTLFASVL
Ga0066710_10403778923300009012Grasslands SoilVDTLYTDTLQFVYHLALAILVGGAFVLGAAAAPGIFRTVRSRGEAGAIFGAVLARWDGL
Ga0099830_1096415013300009088Vadose Zone SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFATNRSRADAGTLFGNVLARF
Ga0099827_1045708923300009090Vadose Zone SoilVETLYFDVLQFLYHLALAILVGGALVLGTSVAPALFTT
Ga0066709_10187287913300009137Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFGSAASRGEAGTLFGSVLARFDGLA
Ga0099792_1089592923300009143Vadose Zone SoilLDSEIPPGHHALVETIYFDVLQLLYHLALAILVGGAVVLGAAAAPAIFASVPSRGEAGAIFGSVLGR
Ga0114129_1046607013300009147Populus RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPAIFASVRSRADAGSLFG
Ga0114129_1069265513300009147Populus RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTVVAPALFASSRSRAEAGTMFGTILARFDGLAVFSVIV
Ga0075423_1008740443300009162Populus RhizosphereVETLYFDTLQFLYHLALAILVGGALVLGAAAAPAIFA
Ga0075423_1020332433300009162Populus RhizosphereMETLYFDTLQFVYHLALAILVAGAVVLGLAAAPAIFATVS
Ga0075423_1116563213300009162Populus RhizosphereMIRSASVENVGFDAVRFVYHLALALIVGGGVALGAAAAPAIFKSVRSRGEAGAIFGE
Ga0134070_1019857713300010301Grasslands SoilMETLYFDLLQFLYHLALAILVGGAIVLGATAAPAIFASIRSRGEAGAIFGAVLGR
Ga0134088_1059516913300010304Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFSSSRSRADAGTLFGNVLARFDG
Ga0134109_1046742013300010320Grasslands SoilVETLYTDMLQFVYHLALAILVGGALVLGSAAAPGIFSTVRSRG
Ga0134086_1028899523300010323Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALF*
Ga0134065_1008777423300010326Grasslands SoilVETLYFDVLQFLYHLALAILVGGAVVLGAAAAPAIFASVRSRGEAGAIFGGVLGRYD
Ga0134080_1041234023300010333Grasslands SoilVETLSFDLLQFLYHLSLAILVGGSLVLGTAVAPALFASRSRADAGTLFGSVLARFD
Ga0134066_1031142923300010364Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFSSSRSRSDAGTLFGNILARFDGLAIFSVV
Ga0137392_1100664423300011269Vadose Zone SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFATNRSRADAGTLFGNVLARFDGLAIFSVI
Ga0137393_1091508513300011271Vadose Zone SoilVETLYFDVLQFFYHLALALIVGGAIVLGSAVAPAVFRGARS
Ga0120156_102065413300011996PermafrostVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFVSSRSRADAGTLFGS
Ga0137389_1007160213300012096Vadose Zone SoilVETLYFDTLQFLYHLALAILVGGALVLGAAAAPAIFASVRSRGEAG
Ga0137389_1058518813300012096Vadose Zone SoilVETLSFDLLQFLYHLALAILIGGSLVLGTAVAPALFSSSRSRADAGT
Ga0137388_1080069613300012189Vadose Zone SoilVETLYFDTLQFLYHLALAILVGGALVLGAAAAPAIFASVRSRGE
Ga0137383_1066553923300012199Vadose Zone SoilVRSEIPVCSDSPVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRSPADAGTLFG
Ga0137383_1136349023300012199Vadose Zone SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFA
Ga0137434_108052413300012225SoilVETLYFDVLQFVYHLALAILVGGALVLGAAAAPAIFASVRSRGEAGAIFGTVLGRYDGVAILCVVLI
Ga0137366_1097478313300012354Vadose Zone SoilMETLYFDALQFLYHLALAILVGGAIVLGTAAAPAI
Ga0137360_1043857413300012361Vadose Zone SoilVETLYFDVLQFLYHLALAILVGGAIVLGAAAAPAIFASVRSRGEAGAIFGAVL
Ga0137361_1107417723300012362Vadose Zone SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRTSADAD
Ga0137390_1099559313300012363Vadose Zone SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASTRSRGDAGTLFGNVLARFDGLALFS
Ga0137373_1038742713300012532Vadose Zone SoilMETLYFDALQFLYHLALAILVGGAIVLGTAAAPAIFASIRSRGEAGAIFGAVLGRY
Ga0137396_1110199213300012918Vadose Zone SoilMLGRRVETLYFDLLQFLYHLALAVLVGGTLLLGTAVAP
Ga0137419_1094891723300012925Vadose Zone SoilVETLSFDLLQFLYHLALTILVGGSLVLGAAVAPALFASSPSRADAGTLFGNILARFDGL
Ga0137419_1114668723300012925Vadose Zone SoilVETLSFDLLQFVYHLALAILVGGSLVLGTAVAPALFTTARSRADAGTLFGSVLG
Ga0137416_1213822023300012927Vadose Zone SoilVETLSFDLLQFVYHLALAILVAGSLVLGTAVAPALFTTARSRA
Ga0134087_1032974813300012977Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFGSAGSRGAAGTL
Ga0120173_100054753300014031PermafrostVETLYFDGLQFLYHLAIALIVGGAIVLGSAVAPAVFT
Ga0134081_1008263323300014150Grasslands SoilVETLYFDVLQFLYHLALAILVGGAVVLGAAAAPAIFASVRSRGEAGAIFG
Ga0134078_1046335723300014157Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFAASRTSA
Ga0137418_1034893913300015241Vadose Zone SoilMETIYFDTLQFLYHFALAILVGGALVLGAAAAPAIFATV
Ga0134089_1013992413300015358Grasslands SoilMETLYFDVLQFLYHLALAILVGGAIVLGTAAAPAIFASIRSRGEAGAVF
Ga0132257_10214847813300015373Arabidopsis RhizosphereVETLYFDIVQFLYHLALAILVGGGLVLGAAAAPAIFKTVPSRGEAGSIFGNVLAR
Ga0134112_1009157123300017656Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFTSARSRADAGTLFGTVLARFDGLAIF
Ga0134112_1036604223300017656Grasslands SoilMLGSGVETLYFDVLQFLYHLALAVIVGGSLVLGAAVAPAVFATAR
Ga0134083_1019525323300017659Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFT
Ga0184619_1032027423300018061Groundwater SedimentVETLYFDVLQFVYHLALAILVGGAVVLGLAAAPAIFASVSSRGEAGTIFGAILGRY
Ga0184617_122273413300018066Groundwater SedimentVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFAASRSRADAGTLFGNVLARF
Ga0184633_1049150613300018077Groundwater SedimentVETLYFDVLQFVYHLALAILVAGALVLGAAAAPAIFASV
Ga0184639_1052203823300018082Groundwater SedimentVETLYFDVLQFVYHLALAILVGGALVLGAAAAPAIFVSVRS
Ga0066667_1189608623300018433Grasslands SoilVESLSFDLLQFLYHLSLAILVGGSLVLGTAVAPALFASRSRADAGTLFGSVLA
Ga0184643_148071713300019255Groundwater SedimentVETLYFDALQFVYHLALAILVGGAVVLGLAAAPAIFASVRSRGE
Ga0193747_105661023300019885SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFATSRSRTDA
Ga0193755_112444723300020004SoilMLGFPVETLTFDLLQFLYHLALTILVGGSLVLGTAVAPALFGSSRSRT
Ga0209642_1021150413300025167SoilVETLYFDVLQFVYHLALAILVGGALVLGAATAPAIFASVRSRGEAG
Ga0207645_1041902813300025907Miscanthus RhizosphereVETLYFDALQFVYHLALAILVGGAVVLGLAAAPAIFATVSSRG
Ga0207662_1136705613300025918Switchgrass RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASS
Ga0207657_1129607113300025919Corn RhizosphereMETLYFDTLQFVYHLALAILVGGAVVLGLAAAPAIFASMSSRGEAGTIFGAVLGRYDGL
Ga0207640_1120123613300025981Corn RhizosphereVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRSRRGK
Ga0209237_114985013300026297Grasslands SoilVETLYFDVLQFLYHLALAILVGGALVLGTSVAPALFTTARSPADAGTLFAGVLAGFD
Ga0209238_127988613300026301Grasslands SoilVETLYFDLLQFLYHFAVAVLVGGALVLGTAVAPALFRSSRSRAEAG
Ga0209239_116986713300026310Grasslands SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFTS
Ga0209470_125889223300026324SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPAVFASSRASADAGTLFGNVLARFDGLAVFS
Ga0209267_131443413300026331SoilVETLYFDLLQFLYHFALVILVGGALVLGAAVAPALFVTARSRAEAGTMFGGV
Ga0209378_105730443300026528SoilVETLYFDVLQFLYHLALAILVGGAVVLGAAAAPAIFA
Ga0209806_107722223300026529SoilVETLSFDLLQFVYHLALAILVGGSLVLGTAVAPALFTTARSRADAGSLFGSVLAHFDGLAIFSVIA
Ga0209157_111816823300026537SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFGSAGSRGAAGTLFGSVLA
Ga0209056_1003357913300026538SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFGSAGRRGEAGTLFGSV
Ga0209056_1061828713300026538SoilVESLSFDLLQFLYHLSLAILVGGSLVLGTAVAPALFASRSRADAGTLFGSVLARF
Ga0209156_1018220813300026547SoilVETLYFDLLQFLYHFALVILVGGALVLGAAVAPALFVTARSR
Ga0209474_1033811713300026550SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFTSSRS
Ga0209981_100750013300027378Arabidopsis Thaliana RhizosphereVETLYFDALQFLYHLALAILVGGSLVLGAAAAPAIFASVRSRGEAGAIFGA
Ga0208993_103633123300027480Forest SoilMMHAVETIYFDTLQFVYHLALAILVGGAVVLGAAAAPAIFASVRSRG
Ga0209388_101052633300027655Vadose Zone SoilVETLSFDLLQFLYHLALTILVGGSLVLGTAVAPALFVSSRSRA
Ga0208989_1009196313300027738Forest SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFATSRSRA
Ga0209074_1047196623300027787Agricultural SoilVESLYFDIVLFIYHLALALIVGGGIVLGSATAPAVFRSVRSRGEA
Ga0209590_1032483613300027882Vadose Zone SoilVETLYFDVLQFLYHLALAILVGGALVLGTSVAPALFTTARSR
Ga0137415_1032852613300028536Vadose Zone SoilVEHLYFDTIQFLYHLALAILVGGGLVLGAAVAPAIFRAVRSRGE
Ga0257175_108046213300028673SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFATNRSRADAGTLFGNVLAR
Ga0307313_1023968513300028715SoilVETIYFDTLQFVYHLALAILVGGAVVLGAAAAPAIFASVPSRGEAGAIFGAVLGRY
Ga0307301_1007885823300028719SoilMETLYFDALQFVYHLALAILVGGAVVLGLAAAPAIFASVRSRGEAGAIFGAVL
Ga0307296_1049865713300028819SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFATSRSSADAGTLFG
Ga0307277_1030944413300028881SoilMLGFPVETLTFDLLQFLYHLALTILVGGSLVLGTAVAPALFASSR
Ga0307277_1039926123300028881SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFASSRSRADAGALFG
Ga0307469_1078533323300031720Hardwood Forest SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPALFTSAR
Ga0307471_10030540513300032180Hardwood Forest SoilVETLSFDLLQFLYHLALAILVGGSLVLGTAVAPAL
Ga0307471_10050482223300032180Hardwood Forest SoilMETLYFDTLQFVYHLALAILVGGAAVLGLAAAPAIFASVTSRGEAGSIFGAVLG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.