Metagenome / Metatranscriptome Family F083986

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083986
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	50 residues
Representative Sequence	MPQIPDLTDPRYLDEVGWFLYHEKYRRDRFGDSYDAERLAYSRLLRDEVA
Number of Associated Samples	103
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.96 %
% of genes near scaffold ends (potentially truncated)	93.75 %
% of genes from short scaffolds (< 2000 bps)	93.75 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.643 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.87% β-sheet: 0.00% Coil/Unstructured: 55.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00005	ABC_tran	19.64
PF00664	ABC_membrane	2.68
PF12276	DUF3617	0.89
PF08241	Methyltransf_11	0.89
PF00535	Glycos_transf_2	0.89
PF00425	Chorismate_bind	0.89
PF04230	PS_pyruv_trans	0.89
PF07991	IlvN	0.89
PF02806	Alpha-amylase_C	0.89
PF06472	ABC_membrane_2	0.89
PF12021	DUF3509	0.89
PF13365	Trypsin_2	0.89
PF00890	FAD_binding_2	0.89
PF01738	DLH	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	1.79
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.89
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.89
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.89
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	11.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	5.36 %
Unclassified	root	N/A	3.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	11.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8.04 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	5.36 %
Unclassified	root	N/A	3.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	11.61 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	8.04 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	5.36 %
Unclassified	root	N/A	3.57 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.89 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	9.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8.04 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	5.36 %
Unclassified	root	N/A	3.57 %
Chroococcidiopsidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales	0.89 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8.04 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	5.36 %
Unclassified	root	N/A	3.57 %
Chroococcidiopsidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae	0.89 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8.04 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	5.36 %
Unclassified	root	N/A	3.57 %
Chroococcidiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis	0.89 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8.04 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	5.36 %
Unclassified	root	N/A	3.57 %
Chroococcidiopsis thermalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → Chroococcidiopsis thermalis	0.89 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2302762	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300000787\|JGI11643J11755_10990754	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300000956\|JGI10216J12902_124557035	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300003503\|JGI26141J51220_1002082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1217	Open in IMG/M
3300004156\|Ga0062589_100148926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1601	Open in IMG/M
3300004157\|Ga0062590_101518346	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300004463\|Ga0063356_100708741	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300005177\|Ga0066690_10302900	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005181\|Ga0066678_10499460	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005294\|Ga0065705_10114538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → Chroococcidiopsis thermalis	3628	Open in IMG/M
3300005328\|Ga0070676_11036011	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005332\|Ga0066388_106962389	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005354\|Ga0070675_101247949	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005355\|Ga0070671_100335528	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300005439\|Ga0070711_100281357	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005444\|Ga0070694_101366387	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005445\|Ga0070708_100132568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2307	Open in IMG/M
3300005445\|Ga0070708_101407219	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005467\|Ga0070706_101575526	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005468\|Ga0070707_101901993	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005518\|Ga0070699_102022133	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005554\|Ga0066661_10783804	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005556\|Ga0066707_10068125	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300005556\|Ga0066707_10393346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	903	Open in IMG/M
3300005568\|Ga0066703_10368903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	861	Open in IMG/M
3300006796\|Ga0066665_11139200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300006797\|Ga0066659_10291716	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300006904\|Ga0075424_101105957	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300007004\|Ga0079218_11002129	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300007076\|Ga0075435_101086304	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300007258\|Ga0099793_10509744	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300009012\|Ga0066710_100817493	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300009012\|Ga0066710_104858543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300009029\|Ga0066793_10075209	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300009053\|Ga0105095_10312072	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300009090\|Ga0099827_10780159	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300009137\|Ga0066709_103765025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300009162\|Ga0075423_12594722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300009177\|Ga0105248_12522968	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300010043\|Ga0126380_10798801	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	772	Open in IMG/M
3300010047\|Ga0126382_10303930	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1199	Open in IMG/M
3300010114\|Ga0127460_1096404	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300010141\|Ga0127499_1183295	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300010362\|Ga0126377_10238735	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300010400\|Ga0134122_13161743	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300011269\|Ga0137392_10742969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	811	Open in IMG/M
3300012199\|Ga0137383_10761624	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	707	Open in IMG/M
3300012202\|Ga0137363_10026526	All Organisms → cellular organisms → Bacteria	3954	Open in IMG/M
3300012204\|Ga0137374_10779006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	711	Open in IMG/M
3300012204\|Ga0137374_10785206	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	707	Open in IMG/M
3300012205\|Ga0137362_11386086	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	589	Open in IMG/M
3300012206\|Ga0137380_11018065	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300012207\|Ga0137381_10674661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	899	Open in IMG/M
3300012353\|Ga0137367_11035265	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300012360\|Ga0137375_10903829	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012532\|Ga0137373_10099207	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300012532\|Ga0137373_10266980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1374	Open in IMG/M
3300012916\|Ga0157310_10441962	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012917\|Ga0137395_10909503	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012918\|Ga0137396_11132748	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012925\|Ga0137419_11067592	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300012948\|Ga0126375_11365679	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	599	Open in IMG/M
3300012960\|Ga0164301_10506332	Not Available	872	Open in IMG/M
3300015200\|Ga0173480_11220486	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300015358\|Ga0134089_10566503	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300015359\|Ga0134085_10121567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1095	Open in IMG/M
3300015372\|Ga0132256_103773895	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300017994\|Ga0187822_10286984	Not Available	577	Open in IMG/M
3300018466\|Ga0190268_11080560	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300018468\|Ga0066662_10929147	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300018468\|Ga0066662_12607100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300019233\|Ga0184645_1129825	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300019887\|Ga0193729_1111234	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300021559\|Ga0210409_11244346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300022214\|Ga0224505_10184851	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300023057\|Ga0247797_1010601	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300025165\|Ga0209108_10065980	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300025901\|Ga0207688_10424039	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300025906\|Ga0207699_10459789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	914	Open in IMG/M
3300025910\|Ga0207684_10012302	All Organisms → cellular organisms → Bacteria	7449	Open in IMG/M
3300025924\|Ga0207694_10747017	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300025928\|Ga0207700_10963592	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300025931\|Ga0207644_10279566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1340	Open in IMG/M
3300025941\|Ga0207711_11980309	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026116\|Ga0207674_12215017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300026118\|Ga0207675_100307983	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300026118\|Ga0207675_102098117	Not Available	582	Open in IMG/M
3300026121\|Ga0207683_11313860	Not Available	669	Open in IMG/M
3300026308\|Ga0209265_1075839	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300026358\|Ga0257166_1009472	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300026496\|Ga0257157_1092420	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026508\|Ga0257161_1046582	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300027490\|Ga0209899_1115048	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300027650\|Ga0256866_1214442	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027682\|Ga0209971_1187293	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300027722\|Ga0209819_10007572	All Organisms → cellular organisms → Bacteria	3478	Open in IMG/M
3300027748\|Ga0209689_1155468	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300027765\|Ga0209073_10156489	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300027821\|Ga0209811_10149305	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300027846\|Ga0209180_10095483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1690	Open in IMG/M
3300027882\|Ga0209590_10081212	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
(restricted) 3300027997\|Ga0255057_10053626	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300028608\|Ga0247819_10783380	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300028673\|Ga0257175_1016698	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300028673\|Ga0257175_1101235	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300028811\|Ga0307292_10116270	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300031228\|Ga0299914_10693113	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300031903\|Ga0307407_11686950	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031965\|Ga0326597_11276916	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300033814\|Ga0364930_0226665	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300033814\|Ga0364930_0249967	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300034150\|Ga0364933_206496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.14%
Host-Associated	Host-Associated	17.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.79%
Plants	Host-Associated → Plants	17.86%
Aquatic	Environmental → Aquatic	5.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Freshwater	Environmental → Aquatic → Freshwater	3.57%
Floodplain	Environmental → Terrestrial → Floodplain	2.68%
Marine	Environmental → Aquatic → Marine	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment	0.89%
Gulf	Environmental → Aquatic → Marine → Gulf	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.57%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.89%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003503	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010114	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027997 (restricted)	Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23027621	3300000033	Soil	MADIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERLAYSRLLLAEVAGYLGRDVS
JGI11643J11755_109907541	3300000787	Soil	MADIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERVAYSRLLLAEVAD
JGI10216J12902_1245570351	3300000956	Soil	MPEIPDLSNPRYLDEVGWFLYHEKYRRDHFGGPYDA
JGI26141J51220_10020821	3300003503	Arabidopsis Thaliana Rhizosphere	MPEVPDLTDPRYLDEIGWFLYHEKYRRDRFGGSYDAERVANSRLLRDEVAAYLEQHAGW
Ga0062589_1001489263	3300004156	Soil	MPEVPDLTDPRYLDEIGWFLYHEKYRRDRFGGSYDAERVANSRLLRDEVAAY
Ga0062590_1015183462	3300004157	Soil	MPELPDLDDPRYLDELGWFVHYAERRRDEYGASYDEERLANSR
Ga0063356_1007087412	3300004463	Arabidopsis Thaliana Rhizosphere	MLEGTLPKIPDVTDRYRDELGWFLYQEKCRHDQFCASYTDERLAYSRLLLDEVLGA*
Ga0066690_103029002	3300005177	Soil	MTQMPDLTRARHLDEIGWFLYHEKYRRDEFGGSYAAERLANSRLLLAEVARFLGR
Ga0066678_104994603	3300005181	Soil	MPKIPDLTDPHYLDEVGRFLYHEKYRRDRFGGSYDDERLAHSRLLLTEVVGHLGRDVR
Ga0065705_101145381	3300005294	Switchgrass Rhizosphere	MPFVPDLTDPRYVDEVGWFLYHEKYDRDKFGGSYDAERRAYSRLLLEEVTNSLGQ
Ga0070676_110360112	3300005328	Miscanthus Rhizosphere	MPEVPDLTDPRYLDEIGWFLYHEKYRRDRFGGSYDAERVA
Ga0066388_1069623892	3300005332	Tropical Forest Soil	MLRIPDLTDPRYLDELGWFLYHEKFRRDQFGGTYDEERLAYSRLLMDE
Ga0070675_1012479491	3300005354	Miscanthus Rhizosphere	MADIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERVAY
Ga0070671_1003355283	3300005355	Switchgrass Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERIAYS
Ga0070711_1002813573	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPQIPDLTDPRYLDEVGWFLYHEKYRRDRFGDSYDAERLAYSRLLRDEVAAALGQPPRWF
Ga0070694_1013663871	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPEIPDLTDPRYLDEVGWFLHHEACERDGFTGSYREERLAYSRMFLQEVLS
Ga0070708_1001325684	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPQIPDLTDPRYLDEVGWFLYHEKYRRDRFGDSYDAERLAYSRLLRDEVA
Ga0070708_1014072192	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGDSYDAERLAYS
Ga0070706_1015755261	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGGSYDAERLAYSRLLRDEVATFLGRDA
Ga0070707_1019019931	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPQIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDEERLAY
Ga0070699_1020221331	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGDSYDAERLAYSRLLRDEVAAFLGRDAGWF
Ga0066661_107838041	3300005554	Soil	MPEIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYNAERLAYSRLLLQEVVD
Ga0066707_100681251	3300005556	Soil	MPEIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLLQEVIDSLGR
Ga0066707_103933462	3300005556	Soil	MPEIPDLPDTRYLDEVGWVLYLEKYRRDHFGGSYDAE
Ga0066703_103689032	3300005568	Soil	MPKIPDLTDPHYLDEVGRFLYHEKYWRDRFGGSYDDERLAHSRLLLKEVVGHLGRDVRWT
Ga0066665_111392002	3300006796	Soil	MPEIPDLSNPRYLDEVGWFLYHEKYQRDHFGGPYDAERLAYSRLLRDEVVACLGRDARWLEDK
Ga0066659_102917161	3300006797	Soil	MPKIPDLTDPHYLDEVGRFLYHEKYRRDRFGGSYDDERLAHSRLLLKEVVGHLG
Ga0075424_1011059571	3300006904	Populus Rhizosphere	MREIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLLQEVVDYLGRDVRWA
Ga0079218_110021292	3300007004	Agricultural Soil	MSQIPDLTDPRYLDEIGWFLYHEKYRRGQFGGSYDAERLAYSRLLRDEVAGYLN
Ga0075435_1010863042	3300007076	Populus Rhizosphere	MPQIPDLTDPRYLDEIGWFLYHEKYRRGQFGGSYNAERLAYSRLLRDEVTHYLDADAS
Ga0099793_105097441	3300007258	Vadose Zone Soil	MPQIPDLTNPRYRDEVGWFLYHEKYGREKFGGSYDAERVAYSRLLLKDVLRFAERDTKW
Ga0066710_1008174931	3300009012	Grasslands Soil	MPEIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYNAERLAYSR
Ga0066710_1048585432	3300009012	Grasslands Soil	MPEIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLLQEVVDSLGRDVRWV
Ga0066793_100752093	3300009029	Prmafrost Soil	MPQIPDLTNPRYRDEVGWFLHHEKYGREQFGGSYDAERVAYSRLLLEDVLRFAERDPNGCPIKQS*
Ga0105095_103120721	3300009053	Freshwater Sediment	MPQIPDLTDPRYLDEIGWFLYHEKYRRGQFGGSYTAERLAYSRLLRDEVARHLDTDASW
Ga0099827_107801593	3300009090	Vadose Zone Soil	MPEIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYQAERLAHSRLLR
Ga0066709_1037650251	3300009137	Grasslands Soil	MPEIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLA
Ga0075423_125947222	3300009162	Populus Rhizosphere	MREIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLLQEVVDYLGRDVRWAETK
Ga0105248_125229681	3300009177	Switchgrass Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERIAYSRLLRDEVLGFLDALAR*
Ga0126380_107988011	3300010043	Tropical Forest Soil	MVHISDLADPRYLDEVGWFLYHERYERQQFGGSYDDERLEYSR
Ga0126382_103039302	3300010047	Tropical Forest Soil	MVHISDLADPRYLDEVGWFLYHERYERQKFGGSYDDERLEYSRLLLAEVLGY
Ga0127460_10964041	3300010114	Grasslands Soil	MPQLPDLAEPRYLDEIGWFLYHEKYRRDKFGGSYTAERLAYSQLLLDEVIFFLGQ
Ga0127499_11832952	3300010141	Grasslands Soil	MLRIPDLADPRYLDEVGWFLYHERFERHQFGGSYDDER
Ga0126377_102387351	3300010362	Tropical Forest Soil	MFRIPDLTDPRYLHEIGWFLYHERFGRDQFGGPYDHERL
Ga0134122_131617431	3300010400	Terrestrial Soil	MPDIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERLAYSSLLLAEVAEHLGRDVSWVEGKT
Ga0137392_107429692	3300011269	Vadose Zone Soil	MPKIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYS
Ga0137383_107616242	3300012199	Vadose Zone Soil	MLYIPDLADPRYLDEIGWFLYHEKYERTQFGGSYDEER
Ga0137363_100265264	3300012202	Vadose Zone Soil	MPKIPDLTDPRYLDEVGWFLYHERYRRDLFGGSYDAERLAYSRLLL
Ga0137374_107790062	3300012204	Vadose Zone Soil	MPEIPDLSNPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLR
Ga0137374_107852063	3300012204	Vadose Zone Soil	MLRIPDLADPRYLDEVGWFLYHERYERHQFGGSYDDKRRQYSHLLLAEVLGYCGQNQ
Ga0137362_113860862	3300012205	Vadose Zone Soil	MLRIPDLADPRYLDEVGWFLYHERYERHQFGGSYDD
Ga0137380_110180651	3300012206	Vadose Zone Soil	MSFIPDLTDPRYLDEVGWFLYHEIYGRSQFGGSYDEERLAYSRLL
Ga0137381_106746611	3300012207	Vadose Zone Soil	MPDLTDPRYLDEVGWFLYHEKYERDRFGGSYDAERLAYSRLLLNEVVGY
Ga0137367_110352652	3300012353	Vadose Zone Soil	MPEIPDLSNPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLRDEVVACLGGDVRWLEGK
Ga0137375_109038292	3300012360	Vadose Zone Soil	MPDIPDLTDPRYLEEIGWFLYYEKYRRDQFDGPYDAER
Ga0137373_100992072	3300012532	Vadose Zone Soil	MPEIPDLSNPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLRDEVVACLGGDVRWLEG*
Ga0137373_102669803	3300012532	Vadose Zone Soil	MPEIPDLSNPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLRDEVVACLGGDVRELESK
Ga0157310_104419622	3300012916	Soil	MPELPDLRDPRYLDELGWFVHYAERRRDEYGASYDEERLANSRLLLDEVLEFCGR
Ga0137395_109095032	3300012917	Vadose Zone Soil	MPEIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAHSRLL
Ga0137396_111327481	3300012918	Vadose Zone Soil	MPQIPDLTDPRYLDEVGWFLYHERYARDQFGGSYDAEQLAY
Ga0137419_110675921	3300012925	Vadose Zone Soil	MPKIPDLTDPRYLDEVGWFLYHEKYRRDRFGGSYDAER
Ga0126375_113656791	3300012948	Tropical Forest Soil	MPNVPDFADPRYLDEVGWFLFHEKYQREQFGRTYTEERLAYSELFMDEVLG
Ga0164301_105063322	3300012960	Soil	MPLIPDLAHPRYRDEVGWFLYHEKYGCDTFGGSYDAERIAYSRLLLEEALRYAERDT
Ga0173480_112204861	3300015200	Soil	MADIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERVAYSRLLLAEVADHLGRDVSWV
Ga0134089_105665031	3300015358	Grasslands Soil	MPQIPDLTDPRYLDEVGWFLYHEKYERDRFGGSYDAERLAYSRLLLDEVVGY
Ga0134085_101215673	3300015359	Grasslands Soil	MPDLTDPRYLDEVGWFLYHEKYERDRFGGSYDAERLAYSRLLLNEVVG
Ga0132256_1037738952	3300015372	Arabidopsis Rhizosphere	MPKIPDLSDPRYLDEVKYRRDRFGGSYDAERLAYSRLLRDEILACLGRPP
Ga0187822_102869842	3300017994	Freshwater Sediment	MPNIPDLTDSRYLDEVGWFIYHEKYRRDQFGGSYESERVQYSRLLLEEITGILGWD
Ga0190268_110805601	3300018466	Soil	MPQIPDLTDPRYLDEIGWFLYHEKYRRGQFGGSYNAERLAYSRLLRDEVVGYLDTDASWLERK
Ga0066662_109291472	3300018468	Grasslands Soil	MPQIPDLTDPRYLDEVGWFLYHEKYERDRFGGSYDAERLAYSRLLLDEVVGYLGRDTNWF
Ga0066662_126071002	3300018468	Grasslands Soil	MPQMPDLTDPRYLDEVGWFLYHEKYERDRFGGSYDAERLAYSRLLLMERCS
Ga0184645_11298252	3300019233	Groundwater Sediment	MSFIPDLTDPRYLDEVGWFLYHEKYGRPQFGGSYDEE
Ga0193729_11112341	3300019887	Soil	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGGSYNAERLAYSRLLRDEVAAF
Ga0210409_112443462	3300021559	Soil	MPEIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERLAHSRLL
Ga0224505_101848511	3300022214	Sediment	MPKIPDLTDPRYLDEVGWFLYHEKYERDKFGGSYDNERIAYSRLLLEEVLKYMGRD
Ga0247797_10106011	3300023057	Soil	MPEVPDLTDPRYLDEIGWFLYHEKYRRDRFGGSYDAERVANSRLLR
Ga0209108_100659801	3300025165	Soil	MTRIPNFADPRYLDEVGWFLYHEKYRRDQFGGSYDTERLA
Ga0207688_104240391	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERIAYSRLLRDEVLGF
Ga0207699_104597893	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPQIPDLTDPRYLDEVGWFLYHEKYRRDRFGDSYDAERLAYSRLLRDEVAAALGQPPRWFEDR
Ga0207684_100123021	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPQIPDLTDPRYLDEVGWFLYHEKYRRDRFGDSYDAERLAYSRLLRDEVAAALG
Ga0207694_107470171	3300025924	Corn Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERIAYSRLLRDEVLG
Ga0207700_109635922	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPQIPDLTDPRYLDEVGWFLYHEKYRRDRFGGSYDAERLAYSRLLRDEVAAALGQPPRW
Ga0207644_102795661	3300025931	Switchgrass Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERIAYSRLLRDEVLGFL
Ga0207711_119803091	3300025941	Switchgrass Rhizosphere	MPRIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERIAYSRLLRDEVLGFLGRP
Ga0207674_122150171	3300026116	Corn Rhizosphere	MPQIPDLTDPRYLDEIGWFLYHEKYRRGQFGDSYNAERLAYSRL
Ga0207675_1003079833	3300026118	Switchgrass Rhizosphere	MADIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERVA
Ga0207675_1020981171	3300026118	Switchgrass Rhizosphere	MPHIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERLAYSRLLLAEVAEYLGRD
Ga0207683_113138601	3300026121	Miscanthus Rhizosphere	MADIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERVAYSRLLLAEV
Ga0209265_10758392	3300026308	Soil	MPQIPDLAEPRYLDEIGWFLYHEKYRRDKFGGSYTAERLAYSQLLLD
Ga0257166_10094721	3300026358	Soil	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGGSYDAERLAYSRLLRDEVATFLGRDARWF
Ga0257157_10924202	3300026496	Soil	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGGSYDAERLA
Ga0257161_10465822	3300026508	Soil	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGGSYDAERLAYSRLLRDEVAT
Ga0209899_11150481	3300027490	Groundwater Sand	MPQLPDLTDPRYLDEVGWFLYHEKYERDRFGGSYDAERLAYSRLLLN
Ga0256866_12144421	3300027650	Soil	MPQIPDLSDPRYLDEVGWFLYHEKYRRDGFGGSYRAERLAHSRLLRDEVVACLREDARWFEGR
Ga0209971_11872931	3300027682	Arabidopsis Thaliana Rhizosphere	MIKNPDLTDPRYLDEVGWFLYHEKYGRDQFGGPYDAERRAYSRLFLDEVTR
Ga0209819_100075723	3300027722	Freshwater Sediment	MAFIPDLTDPRYLDEIGWFLHHEKYGRDSFGGSYDAERRAY
Ga0209689_11554682	3300027748	Soil	MPQLPDLAEPRYLDEIGWFLYHEKYRRDKFGGSYTAERLAYSQLLLDEVIFFLGQDSIWMEG
Ga0209073_101564893	3300027765	Agricultural Soil	MPRIPDLSDPRYLDEVGWFLYHEKYRRDRFGGSYDAERIAYSRLLRDE
Ga0209811_101493052	3300027821	Surface Soil	MADIPDLTDPRYLEEIGWFLYYEKYRRDQFGGSYEAERLAYSRLLLAEVADQRPH
Ga0209180_100954831	3300027846	Vadose Zone Soil	MPEIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLLEEVVGYLG
Ga0209590_100812121	3300027882	Vadose Zone Soil	MPKIPDLTDPRYLDEVGWFLYHEKYRRDHFGGSYDAERLAYSRLLLQEVVDSLGRDVRWVES
(restricted) Ga0255057_100536261	3300027997	Seawater	MPKTPDLTNPRYLDEVGWFLYHEKHERDKFGGSYDEERLEYSRLLLKEVLRYL
Ga0247819_107833801	3300028608	Soil	VPFIPDFTDPRYVDEVGWFLYHEKYGRDEFGGSYDAERRAY
Ga0257175_10166982	3300028673	Soil	MPQMPDLTDPRYLDEVGWFLYHEKYERDRFGGPYDAERLAYSRL
Ga0257175_11012352	3300028673	Soil	MPRIPDLSDPRYLDEVGWFLYHEKHRRDRFGGSYDAERLAYSRLLRDEVATFLGR
Ga0307292_101162702	3300028811	Soil	MAEIPDLTDPRYLDEVGWFLYHEKYRRDQFGGSYDAERIAYSRLL
Ga0299914_106931131	3300031228	Soil	MPFIPDLTDPRYLDEVGWFLYHEKYGRDKFGGSYDAERLAYSRL
Ga0307407_116869501	3300031903	Rhizosphere	VPFIPDFTDPRYVDEVGWFLYHEKYGRNEFGGSYDAERRAYSRL
Ga0326597_112769161	3300031965	Soil	MTAIPDLNDPRYLDEIGWFLYHEKYGRDRFGGSYDAER
Ga0364930_0226665_3_116	3300033814	Sediment	MTGIPDLNDPRYLDEIGWFLYHEKYGRDRFGGSYDAER
Ga0364930_0249967_2_172	3300033814	Sediment	MPHLPDLSDPRYRDEVGWFLYYERHGREQFGGSYDQERLAYSHTLLEEVLSHCGQDK
Ga0364933_206496_336_515	3300034150	Sediment	MPQIPDLTDPRYLDEIGWFLYHEKYCRGQFGDSYNAERLAYSGLLRDEIARYLHTDASWF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters