Metagenome Family F083961

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083961
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	74 residues
Representative Sequence	VALELAKVRAGQKCSFKLQLDDVDGDACSDEPDNRSTGEFTVSDKGSQSYKPEDNWRYTIRWHLK
Number of Associated Samples	97
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	98.21 %
% of genes from short scaffolds (< 2000 bps)	91.07 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.643 % of family members)
Environment Ontology (ENVO)	Unclassified (29.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 36.56% Coil/Unstructured: 63.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00881	Nitroreductase	5.36
PF01571	GCV_T	3.57
PF10142	PhoPQ_related	3.57
PF12900	Pyridox_ox_2	2.68
PF01208	URO-D	2.68
PF04055	Radical_SAM	1.79
PF00849	PseudoU_synth_2	1.79
PF02371	Transposase_20	0.89
PF00326	Peptidase_S9	0.89
PF08669	GCV_T_C	0.89
PF13559	DUF4129	0.89
PF01408	GFO_IDH_MocA	0.89
PF13204	DUF4038	0.89
PF00154	RecA	0.89
PF04015	DUF362	0.89
PF00797	Acetyltransf_2	0.89
PF13709	DUF4159	0.89
PF05991	NYN_YacP	0.89
PF13544	Obsolete Pfam Family	0.89
PF11958	DUF3472	0.89
PF01738	DLH	0.89
PF13646	HEAT_2	0.89
PF01118	Semialdhyde_dh	0.89
PF07859	Abhydrolase_3	0.89
PF00850	Hist_deacetyl	0.89
PF00034	Cytochrom_C	0.89
PF13376	OmdA	0.89
PF00759	Glyco_hydro_9	0.89
PF14294	DUF4372	0.89
PF02627	CMD	0.89
PF00072	Response_reg	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	2.68
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.79
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	1.79
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	1.79
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.89
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.89
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.89
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.89
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.89
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.89
COG3688	EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain	Translation, ribosomal structure and biogenesis [J]	0.89

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	82.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	82.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	70.54 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.89 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.54 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.54 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.79 %
Opitutae bacterium Tous-C5TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C5TDCM	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.54 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.79 %
Opitutae bacterium Tous-C5TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C5TDCM	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	70.54 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.79 %
Opitutae bacterium Tous-C5TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C5TDCM	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Unclassified	root	N/A	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_84088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1320	Open in IMG/M
3300001213\|JGIcombinedJ13530_102115756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300001213\|JGIcombinedJ13530_106601645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1003	Open in IMG/M
3300001213\|JGIcombinedJ13530_109122513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300001356\|JGI12269J14319_10329432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	543	Open in IMG/M
3300004463\|Ga0063356_103142340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300004633\|Ga0066395_10101892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1385	Open in IMG/M
3300004776\|Ga0007800_10076794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300005172\|Ga0066683_10418094	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005178\|Ga0066688_10610104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300005178\|Ga0066688_10859732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300005180\|Ga0066685_11083231	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005356\|Ga0070674_101050922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300005356\|Ga0070674_102154625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300005445\|Ga0070708_100925528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300005468\|Ga0070707_101435749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300005526\|Ga0073909_10471709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300005553\|Ga0066695_10115786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1652	Open in IMG/M
3300005574\|Ga0066694_10387932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300005598\|Ga0066706_11518752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300005615\|Ga0070702_101647893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C5TDCM	532	Open in IMG/M
3300005617\|Ga0068859_101632212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300005840\|Ga0068870_11167042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300005841\|Ga0068863_100806323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	936	Open in IMG/M
3300006034\|Ga0066656_10577629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	729	Open in IMG/M
3300006034\|Ga0066656_10934279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300006797\|Ga0066659_11231583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300007258\|Ga0099793_10333305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300009012\|Ga0066710_100401028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2044	Open in IMG/M
3300009012\|Ga0066710_100978332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1305	Open in IMG/M
3300009012\|Ga0066710_102140481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300009012\|Ga0066710_103163883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300009088\|Ga0099830_11183613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300009088\|Ga0099830_11747153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300009089\|Ga0099828_10954956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300009090\|Ga0099827_11709362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300009137\|Ga0066709_100748433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1411	Open in IMG/M
3300009137\|Ga0066709_104478970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300009175\|Ga0073936_10391755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300009549\|Ga0116137_1196145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300009551\|Ga0105238_12386729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300009553\|Ga0105249_11263481	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	810	Open in IMG/M
3300009614\|Ga0116104_1011970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2653	Open in IMG/M
3300009634\|Ga0116124_1111119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	772	Open in IMG/M
3300009636\|Ga0116112_1195770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300009639\|Ga0116122_1166316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	698	Open in IMG/M
3300009643\|Ga0116110_1236310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300009792\|Ga0126374_11638740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300010301\|Ga0134070_10434030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300010325\|Ga0134064_10360852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	570	Open in IMG/M
3300010399\|Ga0134127_10717517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1041	Open in IMG/M
3300012201\|Ga0137365_10595424	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012205\|Ga0137362_11003450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300012206\|Ga0137380_10858493	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012206\|Ga0137380_11724501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012207\|Ga0137381_10119256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2252	Open in IMG/M
3300012212\|Ga0150985_113608873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012212\|Ga0150985_115927510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300012361\|Ga0137360_11049527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300012361\|Ga0137360_11270977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300012361\|Ga0137360_11556405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300012362\|Ga0137361_11213449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300012685\|Ga0137397_11348523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012917\|Ga0137395_11190721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300012927\|Ga0137416_10872644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300012944\|Ga0137410_10726560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300014150\|Ga0134081_10276564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300014159\|Ga0181530_10139834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1393	Open in IMG/M
3300014164\|Ga0181532_10278853	Not Available	952	Open in IMG/M
3300014166\|Ga0134079_10672543	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	524	Open in IMG/M
3300014498\|Ga0182019_10143706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1506	Open in IMG/M
3300015242\|Ga0137412_11111439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	559	Open in IMG/M
3300015359\|Ga0134085_10442660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300015371\|Ga0132258_10229455	All Organisms → cellular organisms → Bacteria	4522	Open in IMG/M
3300015371\|Ga0132258_10980742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2135	Open in IMG/M
3300016341\|Ga0182035_11737169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	564	Open in IMG/M
3300016371\|Ga0182034_10784164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	815	Open in IMG/M
3300017931\|Ga0187877_1191279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300018002\|Ga0187868_1249769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300018009\|Ga0187884_10236498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300018431\|Ga0066655_10125449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1482	Open in IMG/M
3300018433\|Ga0066667_10315685	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300018468\|Ga0066662_12127264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300018482\|Ga0066669_10467594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300021520\|Ga0194053_10025504	All Organisms → cellular organisms → Bacteria	2751	Open in IMG/M
3300021605\|Ga0194054_10015854	All Organisms → cellular organisms → Bacteria	2937	Open in IMG/M
3300024330\|Ga0137417_1452006	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300025441\|Ga0208456_1031343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300025477\|Ga0208192_1058976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	744	Open in IMG/M
3300025650\|Ga0209385_1189489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300025941\|Ga0207711_12134534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300026307\|Ga0209469_1147641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300026530\|Ga0209807_1060268	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1724	Open in IMG/M
3300026532\|Ga0209160_1231795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300026538\|Ga0209056_10088021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2586	Open in IMG/M
3300027846\|Ga0209180_10419347	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300027903\|Ga0209488_10213724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1452	Open in IMG/M
3300028283\|Ga0268283_1174542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300029957\|Ga0265324_10142388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300031250\|Ga0265331_10405651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300031446\|Ga0170820_16869528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300031573\|Ga0310915_10326258	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300031902\|Ga0302322_103091687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300031910\|Ga0306923_11010645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300031912\|Ga0306921_10242214	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300032118\|Ga0315277_11760193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300032261\|Ga0306920_100238274	All Organisms → cellular organisms → Bacteria	2715	Open in IMG/M
3300032805\|Ga0335078_10395906	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1815	Open in IMG/M
3300033004\|Ga0335084_12393042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300033433\|Ga0326726_12276379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300033485\|Ga0316626_11574663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300033977\|Ga0314861_0458753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.61%
Host-Associated	Host-Associated	13.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.96%
Aquatic	Environmental → Aquatic	19.64%
Plants	Host-Associated → Plants	13.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.18%
Freshwater	Environmental → Aquatic → Freshwater	16.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Marine	Environmental → Aquatic → Marine	2.68%
Peat	Environmental → Terrestrial → Peat	1.79%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Lake	Environmental → Aquatic → Freshwater → Lake	3.57%
Loam	Environmental → Terrestrial → Soil → Loam	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.68%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.68%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300021605	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-10m	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025441	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028283	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_36m	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_01418200	2199352024	Soil	YEENKGYEKSQVKIPMNLELPKVAPGQKCSFKMQLDDVDGDTCTEDVDNRSVGEFVASEKGSQTFKPENNWQYTIRWHLK
JGIcombinedJ13530_1021157561	3300001213	Wetland	SATWYFCLDATVAGATKRFYQENKGYDKNKVTIPLGLEVPGAKAGQKCSFKMQLDDIDGDVCTDEVDDRSTGEFTISDRGSQTFKPEDNWSYTIRWHLK*
JGIcombinedJ13530_1066016452	3300001213	Wetland	RFYQENKGYDKNKVTIPLGLEVPGAKAGQKCSFKMQLDDIDGDVCTEEVDDRSTGEFTISDRGSQSFKPEDNWSYTIRWHLK*
JGIcombinedJ13530_1091225131	3300001213	Wetland	WFLCFDARVEGVIRTYHVEGRGYNKNQITIPVALELPKVRAGQKCSFTLKLDDVEEDACTAEVDNKSTGEFTVSDKGTQTYKPEDDWRYTIRWHLK*
JGI12269J14319_103294321	3300001356	Peatlands Soil	KCSFKLQLDDVDEDACGEAADNHSTGEFTVSERGAQAYKPEDNWRYTIHWRLK*
Ga0063356_1031423402	3300004463	Arabidopsis Thaliana Rhizosphere	DKSQVTIPVALELPKAQPGQKVTFKMQLDDIDGDACSDEPDNRSNGEFTVSEKGSQTFKPANDWNYTIRWHLKQ*
Ga0066395_101018922	3300004633	Tropical Forest Soil	ATWYLCLEADVNGSKARYYVENKGYDKNQVTIPLGLALKAKAGQKCSFKLQLDDVDGDACTDEVDNRSTGEFTVSERGSQSYKPEDHWRYTIRWHIK*
Ga0007800_100767941	3300004776	Freshwater	GVSRTYHVDGKGYDKNQVTIPAALELPKVSLGQKCSFKLQLDDVEGDVCTEEVDNRSAGEFTVSEKGTQTYKPEDNWRYTIRWHLK*
Ga0066683_104180941	3300005172	Soil	NKGYEKNQVTIPVALELAKARVGQKCSFKMQLDDVDEDACTEEVDNRSTGEFTVSEKGSQAYKPEDNWRYTIRWHLK*
Ga0066688_106101041	3300005178	Soil	LQNVHAGQKCSFWMQLDDVDDDACGDEPDNRSTGDFTISEQGSQTFKPEANWTYTIRWHLAK*
Ga0066688_108597321	3300005178	Soil	VTIPVALEVPKMSAGKKCTFTLQLDDIDDDACGDEPDNRSTGEFTVNERGSQSYKPEDNWRYTIRWHLK*
Ga0066685_110832311	3300005180	Soil	PKVKAGQKCSFKMQLDDVDGDACGDEPDNRSTGEFTVSEKGSQSYKPEDTWRYTIRWHLK
Ga0070674_1010509221	3300005356	Miscanthus Rhizosphere	EAKLGGVMRRYYVENKGYDKSQVTIPVALELPKAQAGQKVSFKMQLDDIDGDACSDEPDNRSNGEFTVSEKGSQTFKPENDWSFTIRWHLK*
Ga0070674_1021546251	3300005356	Miscanthus Rhizosphere	VALELPKAQAGQKVTFKMQLDDIDGDACSDEPDNRSNGEFTVSEKGSQTFKPENDWSYTIRWHLKH*
Ga0070708_1009255281	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QAKADGVSGRHHLENKGYNKKQVTIPVGLELPKVRAGQKCSFTLQLDDVDDDACTDEVDNRSAGEFTISERGSQSYKPEDNWRYTIRWHLK*
Ga0070707_1014357491	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YVAGKGYDKKQVTIPVALELPKVSAGQKCSFVLQLDDIDDDACGNEPDNRSTGEFTVSGRGSQSYKPEDNWRYSIRWHMK*
Ga0073909_104717092	3300005526	Surface Soil	TSHRYYVAGKGYDKKQVTLPVALELAKVSTGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTTSERGSQSYKPEDNWRYTIRWHMK*
Ga0066695_101157862	3300005553	Soil	VKTPDGASHRYHVDGKEYDKKRVTIPVALEVPKMSAGKKCTFTLQLDDIDDDACGDEPDNRSTGEFTVNERGSQSYKPEDNWRYTIRWHLK*
Ga0066694_103879322	3300005574	Soil	PQSTTWFVCLEAKTPDGTSHRYYVAGKGYDKKQVTIPVGLELPKAKTGQKCSFTLQLDDIDDDACGDEPDNRSTGEFIVSERGSQSFKPEDHWRYTIRWHLR*
Ga0066706_115187521	3300005598	Soil	LAKVSAGQKCTFTLQLDDIDDDACGDEPDNRTSGEFTVSERGSQSYKPEDNWRYTIRWHLK*
Ga0070702_1016478931	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RLQLDDIDEDACTEEVDNRSTGEFTITERGSQSYKPEEHWSYTIRWHLKQ*
Ga0068859_1016322122	3300005617	Switchgrass Rhizosphere	ALELPKVSMGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTVTERGSQSYKPEDHWHYAIRWHLK*
Ga0068870_111670421	3300005840	Miscanthus Rhizosphere	VGEMMRRYYVENKGYDKSQVTIPIALELPKAQPGQKVTFKMQLDDIDGDACSDEPDNRSNGEFTVSEKGSQTFKPANDWNYTIRWHLKQ*
Ga0068863_1008063232	3300005841	Switchgrass Rhizosphere	LELPKVSMGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTVTERGSQSYKPEDHWHYAIRWHLK*
Ga0066656_105776291	3300006034	Soil	LPKAKTGQKCSFTLQLDDIDDDACGDEPDNRSTGEFIVSERGSQSFKPEDHWRYTIRWHLK*
Ga0066656_109342791	3300006034	Soil	VCFEANTDEAKGRHYVANKGYEKNQVTIPVGLELTKAKAGQKCSFRLQLDDVDDDACGDEPDNRSTGQFTVSEKGSETYKPEEKWRYTIRWHLK*
Ga0066659_112315832	3300006797	Soil	DNPQSETWFICFEANLEGVNRRYYVENKGYNKKQVTIPIALELPKARAGQKCSFKMQLDDVDEDACTEEVDNRSKGEFAVTERGSQTFKPEENWRYTIRWHLK*
Ga0099793_103333051	3300007258	Vadose Zone Soil	IPMALEVPAVRVGQKCSFTVQLDDVDADACTDSADNRSAGEFSVSERGSQSYKPEDNWRYIIHWHLKP*
Ga0066710_1004010282	3300009012	Grasslands Soil	VALELAKMSTGQKCTFTLQLDDIDDDACGDEPDNRTTGEFTASERGSQSYKPEDHWRFAIPWHLK
Ga0066710_1009783321	3300009012	Grasslands Soil	KTCTFTLQLDDIDDDACGDEPDNRSTGEFTVSERGSQAYKPMDNWRYTIRWHLK
Ga0066710_1021404812	3300009012	Grasslands Soil	PVALEVPKMSAGKKCTFTLELDDIDDDACGDEPDNRSTGEFTVSERGSQPYKPEDNWRYTIRWHLK
Ga0066710_1031638831	3300009012	Grasslands Soil	GQKCSFKMQLDDIDEDACGDEPDNRSTDEFAVSERGSQSFKPLDNWRYTLRWHLK
Ga0099830_111836132	3300009088	Vadose Zone Soil	TIPLALELPKARPGQKCGFKLQLDDVDGDVCTEDVDNRSTGEFTVSEKGAQTFKPEANWRYTIRWHLK*
Ga0099830_117471532	3300009088	Vadose Zone Soil	PMALEVPAVRVGQKCSFTVQLDDVDADACTDSADNRSTGEFNASERGSQSYKPEDNWRYIIHWHLKP*
Ga0099828_109549561	3300009089	Vadose Zone Soil	LCFEAKADGESHRHHVEDKGYDKNQVTIPMALEVPAVRLGQKCSFTVQLDDVDADACTDSADNRSAGEFSVSERGSQSYKPEDNWRYIIHWHLKP*
Ga0099827_117093621	3300009090	Vadose Zone Soil	LELPKVSAGQKCSFTLQLDDIDDDACGDAPDNRSAGEFIVSERGSQSYKPEDNWRYTIRWHLK*
Ga0066709_1007484331	3300009137	Grasslands Soil	PGALELPKAKTGQKCSFTLQLDDIDEDACGDEPDNRSTGEFTVSERGSQSYKPEDHWRYTIRWHLK*
Ga0066709_1044789701	3300009137	Grasslands Soil	EYDKNQVTIPVALELAKMSTGQKCTFTLQSDDIDDDACGDEPDNRTTGEFTASERGSQSYKPEDHWRFAIPWHLK*
Ga0073936_103917552	3300009175	Freshwater Lake Hypolimnion	LGQKCSFKLQLDDVEGDVCTEEVDNRSAGEFTVSEKGTQTYKPEDNWRYTIRWHLK*
Ga0116137_11961451	3300009549	Peatland	ELPKIQAGQKCSFKLQLDDVDGDVSTDEVDNRSTGEFTISQKGAQAYKPEDNWRYTIRWHLK*
Ga0105238_123867291	3300009551	Corn Rhizosphere	NKGYDKSQVTIPVMLEFPKAQSGQNVTFKMQLDDIDGDACSDEPDNRSTGEFTASDSGSKSFKPENDWSYTIRWHMKAP*
Ga0105249_112634811	3300009553	Switchgrass Rhizosphere	QKVTFKMQLDDIDGDACSDEPDNRSNGEFTVSDKGSQTFKPENDWSYTIRWHLK*
Ga0116104_10119701	3300009614	Peatland	PKIQAGQKCSFKLQLDDVDEDVCTDEVDNRSTGEFTISERGAQAYKPQDNWRYTIRWHLK
Ga0116124_11111191	3300009634	Peatland	LPKIQAGQKCSFKLQLDDVDEDVCTDEVDNRSTGEFTISERGAQAYKPQDNWRYTIRWHLK*
Ga0116112_11957701	3300009636	Peatland	TIPVALELPKIQAGQKCSFKLQLDDVDGDVSTDEVDNRSTGEFTISQKGAQAYKPEDNWRYTIRWHLK*
Ga0116122_11663161	3300009639	Peatland	GYEQNRVTIPVALELPKIKAGQKCSFKLQLDDVDEDACGEEADNRSTGEFTVSERGALACKPEDNWRYTIRWHLK*
Ga0116110_12363101	3300009643	Peatland	ATWFLCLEAKVEGVSRRYHLEGKGYDKNQVTIPVGLELPQVRAGQKCSFKLQLDDMDEDVCTEEVDNRSTGEFTVSEKGTQTYKPEDNWRYAIRWHLK*
Ga0126374_116387402	3300009792	Tropical Forest Soil	CTFKLQLDDVDGDACTEEVDNRSTGEFIVSERGSQNYKPEDHWRYTVRWHLK*
Ga0134070_104340301	3300010301	Grasslands Soil	AKAGDASRRYYVEGKEYTKNQVTIPTALELPKVQAGQKCSFKIQLDDIDGDACSDDPDNKSTGEFTVSEKGSQSYKPEDNWRYTIRSHLK*
Ga0134064_103608521	3300010325	Grasslands Soil	KKQVTLPVALELAKVSTGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTISERGSQSYKPEDNWRYTIRWHMK*
Ga0134127_107175173	3300010399	Terrestrial Soil	EVKLGDATRRYYVENKGYDKSQVTIPVALELPKAQPGQKVTFKMQLDDIDGDACSDEPDQRSTGEFAVSERGSQSFKPENDWSYTIRWHLK*
Ga0137365_105954241	3300012201	Vadose Zone Soil	VALELAKVRAGQKCSFKLQLDDVDGDACSDEPDNRSTGEFTVSDKGSQSYKPEDNWRYTIRWHLK*
Ga0137362_110034502	3300012205	Vadose Zone Soil	LELKAKPGQKCSFKMQLDDVDGDACTDEVDNRSTGEFTVSERGSQSYKPEDHWRYTVRWHMK*
Ga0137380_108584931	3300012206	Vadose Zone Soil	AGQKCSFKIQLDDVDGDACSDEPDNKSTGEFTVSDKGSQSYKPEDNWRYTIRWHLK*
Ga0137380_117245012	3300012206	Vadose Zone Soil	AGQKCSFKIQLDDIDGDACSDEPDNRSTGEFSVSERGSQTYKPEDHWRYTIRWHLK*
Ga0137381_101192561	3300012207	Vadose Zone Soil	NQVTIPMALEVPAVRVGQRCSFTVQLDDVDADACTDSADNRSTGEFSVSERGSQSYKPEDNWRYIIHWHLKP*
Ga0150985_1136088732	3300012212	Avena Fatua Rhizosphere	QVTIPVALELPKAKAGEKVSFKMQLDDIDGDACSDEPDNKSTGEFQVSDRGSQSFKPENDWQYTIRWHLK*
Ga0150985_1159275101	3300012212	Avena Fatua Rhizosphere	TRRYYVENKGFEKSQVTIPVALELPKAKVGEKVSFKMQLDDVDGDACSDEPDNKSTGEFQVSDRGSQSFKPENDWQYTIRWHLK*
Ga0137360_110495272	3300012361	Vadose Zone Soil	CFEAKAGDTSRRYYVEGKEYTKNQVTIPTALELPKVQAGQKCSFKIQLDDIDGDACSDEPDNRSTGEFTVTDKGSQSFKPEDNWRYTIRWHLK*
Ga0137360_112709771	3300012361	Vadose Zone Soil	SATWYLCFEVNVGGSKGRYYIENKGYDKNQITIPLVLELKAKPGQKCTFKMQLDDVDGDACTDEVDNRSTGEFTVTERGSQSYKPEDHWRYTVRWHMK*
Ga0137360_115564052	3300012361	Vadose Zone Soil	EDKGYDKNQVTIPMALEVPAVRVGEKCSFTVQLDDVDADACTDSADNRSTGEFSVSERGSQSYKPEDNWRYIIHWHLKP*
Ga0137361_112134491	3300012362	Vadose Zone Soil	KCSFKMQLDDVDGDACTDEVDNRSTGEFTVSERGSQSYKPEDHWRYTVRWHMK*
Ga0137397_113485231	3300012685	Vadose Zone Soil	KSQVRIPVALELPKVRSGQKCTFKMQLDDVDADVCTDEVDNQSTGEFSVGERGSQTYKPEGNWRYTISWHLK*
Ga0137395_111907211	3300012917	Vadose Zone Soil	CTFTLQLDDIDDDACGDEPDNRSTGEFTVNERGSQSYKPEDNWRYTIRWHLK*
Ga0137416_108726442	3300012927	Vadose Zone Soil	NTPQATWFVCFEAKAGDASRRYYVEGKEYTKNQVTIPTALELPKVQAGQKCSFKIQLDDVDGDACSDEPDNKSTGEFTVSEKGSQSYKPEDNWRYTIRWHLK*
Ga0137410_107265602	3300012944	Vadose Zone Soil	ELPKVQAGQECSFKIQLDDIDGDACGDEPDNRSTGEFTVTDKGSQSYKPEDNWRFTIRWHLK*
Ga0134081_102765642	3300014150	Grasslands Soil	VGLKLQNVHAGQKCSFWMQLDDVDDDACGDEPDNRSTGDFTISEQGSQTFKPEANWTYTIRWHLAK*
Ga0181530_101398341	3300014159	Bog	VTRTYHVDGKGYDKKQATIPVGLELPKARPGQKCSFKLQLDDEDGDVCTEDVDNRSTGEFAVSDKGEQTYKPEDNWRYTIRWHLK*
Ga0181532_102788532	3300014164	Bog	VGLELPQVRAGQKCSFKLQLDDMDEDVCTEEVDNRSTGEFTVSEKGTQTYKPEDNWRYTIRWHLK*
Ga0134079_106725431	3300014166	Grasslands Soil	KGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTVSERGSQSYNPEEHWRFTLRWHLK*
Ga0182019_101437061	3300014498	Fen	EAKVEGVSRRYHLEGKGYDKNQVTIPVGLELPQVRAGQKCSFKLQLDDMDEDVCTEEVDNRSKGEFTVSEKGTQTYKPEDNWRYTIRWHLK*
Ga0137412_111114392	3300015242	Vadose Zone Soil	YTKNQITIPIALELPKVQAGQKCSFKIQLDDVDGDACSDEADSKSTGEFTVSDKGSQSYKPEDNWRYTIRWHLK*
Ga0134085_104426601	3300015359	Grasslands Soil	RRYYVEGKEYTKNQVTIPTALELPKVQAGQKCSFKIQLDDIDGDACSDEPDNKSTGEFTVSEKGAQSYKPEDNWRFTIRWHLK*
Ga0132258_102294551	3300015371	Arabidopsis Rhizosphere	GKGYDKNQVSIPVALELPKAKMGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTVSERGSQSYKPEDHWRYTIRWHLK*
Ga0132258_109807425	3300015371	Arabidopsis Rhizosphere	GKGYDKNQVSIPVALELPKAKMGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTVSERGSQTYKPEDHWRYTIRWHLK*
Ga0182035_117371691	3300016341	Soil	SFKMQLDDVDEDACSDETDNRSTGEFMVSEKGSQAFKPETNWRYTIRWHLK
Ga0182034_107841642	3300016371	Soil	ALELPKAQAGQKVSFKMQLDDVDEDACSDETDNRSTGEFMVSEKGSQAFKPESNWRYTIRWHLK
Ga0187877_11912792	3300017931	Peatland	LPKIQAGQKCSFKLQLDDVDGDVSTDEVDNRSTGEFTISQKGAQAYKPEDNWRYNIRWHL
Ga0187868_12497692	3300018002	Peatland	EGKGYDKNQVTIPVGLELPQVRAGQKCSFKLQLDDMDEDVCTEEVDNRSTGEFTVSEKGTQTYKPEDNWRYAIRWHLK
Ga0187884_102364981	3300018009	Peatland	CSFKLQLDDVDGDVCTDEADNRSTGEFAVSQKGAQAYKPEDHWRYTVRWHLK
Ga0066655_101254491	3300018431	Grasslands Soil	TGQKCSFTLQLDEIDDDACGDEPDNRSTGEFTVSERRSQSFKPEDHWRYTIRWHLR
Ga0066667_103156853	3300018433	Grasslands Soil	VTIPVALEVPKMSAGKKCTFTLQLDDIDDDACGDEPDNRSTGEFTVSERGSQPYKPEDNWRYTIRWHLK
Ga0066662_121272641	3300018468	Grasslands Soil	DKGYDKHQVKIPMALELPAVRVGQRCSFTVQLDDVDADACTDSADNRSTGEFSVSERGSQSYKPEDNWRYVIHWHLKP
Ga0066669_104675941	3300018482	Grasslands Soil	PDGASHRYHVDGKEYDKKQVTIPVALEVPKMSAGKKCTFTLQLDDIDDDACGDEPDSRSTGEFTVSEHGSQPYKPEDNWRYTIRWHLK
Ga0194053_100255041	3300021520	Anoxic Zone Freshwater	PVALELPQVKPGQKCTFKMQLDDIDEDACGDEMDNQSKGEFTVSDKGTQAYKPEDNWKYTINWHMK
Ga0194054_100158544	3300021605	Anoxic Zone Freshwater	VKVEGVSRTYHVDGKGYDKNQVTIPAAFELPKVSLGQKCSFKLQLDDVEGDVCTEEVDNRSAGEFTVSEKGTQTYKPENNWRYTIRWHLK
Ga0137417_14520061	3300024330	Vadose Zone Soil	PQSATWYLCFEVNVSGSKGRHYIENKGYDKNQITIPLALELKAKPGQKCSFKMQLDDVDGDACTDEVDNRSTGEFTVSERGSQSYKPEDHWRYTVRWHMK
Ga0208456_10313431	3300025441	Peatland	IQAGQKCSFKLQLDDVDGDVSTDEVDNRSTGEFTISQKGAQAYKPEDNWRYTIRWHLK
Ga0208192_10589761	3300025477	Peatland	LPKIQAGQKCSFKLQLDDVDEDVCTDEVDNRSTGEFTISERGAQAYKPQDNWRYTIRWHL
Ga0209385_11894891	3300025650	Arctic Peat Soil	VQAGQKCSFKLQLDDVDDDVCTEEVDNRSKGEFTVSEKGTQTYKPEDNWRYTIRWHLK
Ga0207711_121345341	3300025941	Switchgrass Rhizosphere	PKAKAGEKVTFKMQLDDIDGDACSDEPDNRSTGEFQVSDRGSQSFKPENDWQYTIRWHLK
Ga0209469_11476412	3300026307	Soil	RVTIPVALEVPKMSAGKKCAFTLQLDDIDDDACGDEPDNRSTGEFTVSERGSQPYKPEDNWRYTIRWHLK
Ga0209807_10602682	3300026530	Soil	PKVSKGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTASERGSQSYNPEEHWRYTLRWHLK
Ga0209160_12317951	3300026532	Soil	DLKTPDGASHRYHVDGKEYDKKQVTIPVALEVPKVGAGKKCTFTLQLDDIDDDACGDEPDNRSTGEFIVSERGSQPYKPEDNWRYTIRWHLK
Ga0209056_100880212	3300026538	Soil	VFGREDAGKKQVTIPVALELPKVSKGQKCSFTLQLDDIDDDACGDEPDNRSTGEFTASERGSQSYNPEEHWRYTLRWHLK
Ga0209180_104193471	3300027846	Vadose Zone Soil	KNQVKVTMALEVPAVRVGQKCSFTVQLDDVDADACTDSADNRSAGEFNASERGSQSYKPEDNWRYTIHWHLKP
Ga0209488_102137244	3300027903	Vadose Zone Soil	SVKARHYHENKGYDKNQVTIPLALELPNVRPGQKCAFKMQLDDVDEDTCTEEVDNRSTGEFTASEKGSQIYKPESNWRYTIRWHMK
Ga0268283_11745421	3300028283	Saline Water	KVGDVTKRYYVANKGYDKNQVTIPVALELPQVKPGQKCTFKMQLDDIDEDACGDEMDNQSKGEFTVSEKGTQAYKPEDNWKYTINWHMK
Ga0265324_101423882	3300029957	Rhizosphere	CLEAKVEGTIRSYHVEGKGYNKNEVKIPVGLELPNVRPGQKCSFKMQLDDVDEDVCTEEVDNRSAGEFIISENGAQSYKPEDNWRYTIRWHLK
Ga0265331_104056512	3300031250	Rhizosphere	KGYDKNQVVIPISLEAAKVKPGQKCSFKLQLDDVDGDACGDEADNSSTGEFTVTEKGAQTYKPEDHWQYTVRWHVK
Ga0170820_168695281	3300031446	Forest Soil	LEDKGYDKNQITIPMALEIPQVKAGQTCSFKVQLDDVDGDACGEDMDNRSTGEFTVNAKGSQDYKPEANWKYTIRWHLK
Ga0310915_103262583	3300031573	Soil	LALELPNTRTGQKCGFKLQLDDTDEDACTDEVDNRSTGEFIVSEKGAQAFKPEDNWRYTVRWHLK
Ga0302322_1030916871	3300031902	Fen	ELPNVKAGEKCSFTLRLDDVDEDACGEEADNNSKGEFTVSDKGTQSYKPEDNWKYTINWHMK
Ga0306923_110106451	3300031910	Soil	AKKRYYVANKGYDKNQVTIPVALELPKAQAGQKVSFKMQLDDVDEDACSDETDNRSTGEFMVSEKGSQAFKPESNWRYTIRWHLK
Ga0306921_102422143	3300031912	Soil	YDKNQVTIPVALELPKAQAGQKVSFKMQLDDVDEDACSDETDNRSTGEFMVSEKGSQAFKPESNWRYTIRWHLK
Ga0315277_117601931	3300032118	Sediment	AGQKCSFKLQLDDVDEDVCTDQVDNRSTGEFTISERGVQAYKPQDNWRYTIRWHLK
Ga0306920_1002382741	3300032261	Soil	FCFEASVGDAKKRYYVANKGYDKNQVTIPVALELPKAQAGQKVSFKMQLDDVDEDACSDETDNRSTGEFMVSEKGSQAFKPESNWRYTIRWHLK
Ga0335078_103959062	3300032805	Soil	QSATWFLWFEAKVEGVTRTYHVEGKGYDKNQVTIPAVLELPGIRAGQKCSFKLQLDDVAGDESTEEADNKSTGEFAVNEKGEQTYKPEDHWRYTVRWHLK
Ga0335084_123930421	3300033004	Soil	VKGQGYDKNQVHVPMALELPNIQAGQKCAFTLKLDDVDDDVCTEEVDNRSTGEFTVSAKGEQSFKPEDNWRYTIRWHLR
Ga0326726_122763792	3300033433	Peat Soil	FCFEAKIGDVTRRYYVPNKGYDKNQVTIPMALEIPQAKAGQKCTFKMQLDDVDEDACSDEMDNQSKGEFNVSEKGEQAYKPEDNWKYTIKWHLK
Ga0316626_115746631	3300033485	Soil	TIPLGLEVSGAKAGQKCSFTMKLDDIDEDVCTEEVDDRSTGEFTISDRGSQQYKPEDNWSYTIRWHLK
Ga0314861_0458753_266_550	3300033977	Peatland	LCFEATVGGVTRRYHVAGKGYDKNQVTIPLALEWPKIQPGQKCSFKLQLDDVDEDVTTDEVDNRSTGEFTVSQRGAQAYRPEDDWRYTLRWHLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083961

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences