Metagenome / Metatranscriptome Family F083959

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083959
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	92 residues
Representative Sequence	MNVIVLIVVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS
Number of Associated Samples	102
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.82 %
% of genes near scaffold ends (potentially truncated)	34.82 %
% of genes from short scaffolds (< 2000 bps)	79.46 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (13.393 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (32.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.83% β-sheet: 0.00% Coil/Unstructured: 39.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain	d1bgva1	1bgv	0.68249
f.44.1.1: Ammonium transporter	d1u7ga_	1u7g	0.6727
c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain	d1gtma1	1gtm	0.67009
f.22.1.1: ABC transporter involved in vitamin B12 uptake, BtuC	d2qi9a_	2qi9	0.66263
c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain	d1hwxa4	1hwx	0.66163

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01458	SUFBD	4.46
PF00528	BPD_transp_1	3.57
PF17167	Glyco_hydro_36	2.68
PF12732	YtxH	2.68
PF00027	cNMP_binding	2.68
PF01988	VIT1	1.79
PF02482	Ribosomal_S30AE	0.89
PF13453	zf-TFIIB	0.89
PF02810	SEC-C	0.89
PF02738	MoCoBD_1	0.89
PF08298	AAA_PrkA	0.89
PF00076	RRM_1	0.89
PF02880	PGM_PMM_III	0.89
PF00676	E1_dh	0.89
PF00011	HSP20	0.89
PF04226	Transgly_assoc	0.89
PF00535	Glycos_transf_2	0.89
PF13545	HTH_Crp_2	0.89
PF04392	ABC_sub_bind	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	4.46
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.79
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.79
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.89
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.89
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.89
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.89
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.89
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.89
COG2766	Predicted Ser/Thr protein kinase	Signal transduction mechanisms [T]	0.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.79 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	33.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.79 %
Unclassified	root	N/A	1.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	33.93 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	2.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.79 %
Unclassified	root	N/A	1.79 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	33.93 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	2.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Unclassified	root	N/A	1.79 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.89 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	33.93 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	2.68 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.79 %
Unclassified	root	N/A	1.79 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.89 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	33.93 %
Acetonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema	2.68 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.79 %
Unclassified	root	N/A	1.79 %
unclassified Thioalkalivibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio	0.89 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	33.93 %
Acetonema longum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	2.68 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.79 %
Unclassified	root	N/A	1.79 %
Thioalkalivibrio sp. ALE6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio → Thioalkalivibrio sp. ALE6	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_49421	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
2170459024\|GZRSKLJ02GQEYG	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300000550\|F24TB_10070215	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300000574\|JGI1357J11328_10206264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1007365	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300002899\|JGIcombinedJ43975_10060591	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300002899\|JGIcombinedJ43975_10063633	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300003373\|JGI25407J50210_10105021	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300003993\|Ga0055468_10089548	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300004019\|Ga0055439_10051176	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005347\|Ga0070668_102211512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio → Thioalkalivibrio sp. ALE6	508	Open in IMG/M
3300005445\|Ga0070708_101570569	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005446\|Ga0066686_10644781	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005536\|Ga0070697_101793401	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005555\|Ga0066692_10603799	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005937\|Ga0081455_10163268	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300005981\|Ga0081538_10058743	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300006049\|Ga0075417_10067886	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300006797\|Ga0066659_11480100	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006846\|Ga0075430_101137800	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300006854\|Ga0075425_101587524	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300006865\|Ga0073934_10019044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	7329	Open in IMG/M
3300006871\|Ga0075434_101345972	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300006880\|Ga0075429_100412126	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300006904\|Ga0075424_100121098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2765	Open in IMG/M
3300009081\|Ga0105098_10031556	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300009090\|Ga0099827_11248307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300009090\|Ga0099827_11634608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300009156\|Ga0111538_13005372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300009157\|Ga0105092_10113418	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300009157\|Ga0105092_10158825	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1258	Open in IMG/M
3300009157\|Ga0105092_10388815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	793	Open in IMG/M
3300009162\|Ga0075423_10098271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3061	Open in IMG/M
3300009168\|Ga0105104_10121897	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300009444\|Ga0114945_10353649	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300009514\|Ga0129284_10322192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	694	Open in IMG/M
3300009691\|Ga0114944_1365139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300009801\|Ga0105056_1010557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1033	Open in IMG/M
3300009807\|Ga0105061_1002771	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300009810\|Ga0105088_1002314	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300009815\|Ga0105070_1003965	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300009818\|Ga0105072_1008375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1796	Open in IMG/M
3300009836\|Ga0105068_1003419	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300009837\|Ga0105058_1009689	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300010029\|Ga0105074_1014056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
3300010329\|Ga0134111_10004434	All Organisms → cellular organisms → Bacteria	4259	Open in IMG/M
3300012206\|Ga0137380_10557005	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012206\|Ga0137380_11095416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300012209\|Ga0137379_10980658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	750	Open in IMG/M
3300012376\|Ga0134032_1101183	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300012922\|Ga0137394_10436703	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300012929\|Ga0137404_10333879	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300012930\|Ga0137407_10116575	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300012951\|Ga0164300_10308948	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012964\|Ga0153916_10002083	All Organisms → cellular organisms → Bacteria	14695	Open in IMG/M
3300014883\|Ga0180086_1056590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	950	Open in IMG/M
3300015258\|Ga0180093_1043542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	997	Open in IMG/M
3300016270\|Ga0182036_11703619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	532	Open in IMG/M
3300016319\|Ga0182033_10191689	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300016357\|Ga0182032_10058782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2536	Open in IMG/M
3300016445\|Ga0182038_11028822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
3300017657\|Ga0134074_1332518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	558	Open in IMG/M
3300018053\|Ga0184626_10263003	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300018056\|Ga0184623_10010531	All Organisms → cellular organisms → Bacteria	3989	Open in IMG/M
3300018059\|Ga0184615_10248570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	996	Open in IMG/M
3300018063\|Ga0184637_10247401	Not Available	1087	Open in IMG/M
3300018068\|Ga0184636_1223047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300018068\|Ga0184636_1319100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300018072\|Ga0184635_10012790	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300018072\|Ga0184635_10025340	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300018073\|Ga0184624_10049207	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300018075\|Ga0184632_10058133	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1675	Open in IMG/M
3300018076\|Ga0184609_10215071	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300018081\|Ga0184625_10058432	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300018081\|Ga0184625_10151095	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300018084\|Ga0184629_10037301	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300018468\|Ga0066662_10126841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1876	Open in IMG/M
3300019257\|Ga0180115_1376934	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300020065\|Ga0180113_1278850	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1031	Open in IMG/M
3300020067\|Ga0180109_1146109	Not Available	745	Open in IMG/M
3300022209\|Ga0224497_10049568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1817	Open in IMG/M
3300022534\|Ga0224452_1092464	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300022563\|Ga0212128_10243757	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300025310\|Ga0209172_10003644	All Organisms → cellular organisms → Bacteria	22937	Open in IMG/M
3300027006\|Ga0209896_1003364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1566	Open in IMG/M
3300027209\|Ga0209875_1003995	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300027277\|Ga0209846_1001914	All Organisms → cellular organisms → Bacteria	3655	Open in IMG/M
3300027511\|Ga0209843_1023982	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1161	Open in IMG/M
3300027561\|Ga0209887_1000249	All Organisms → cellular organisms → Bacteria	16041	Open in IMG/M
3300027722\|Ga0209819_10006418	All Organisms → cellular organisms → Bacteria	3767	Open in IMG/M
3300027722\|Ga0209819_10260119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300027743\|Ga0209593_10216733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	671	Open in IMG/M
3300027873\|Ga0209814_10102644	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300027909\|Ga0209382_10549610	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300027952\|Ga0209889_1002862	All Organisms → cellular organisms → Bacteria	4898	Open in IMG/M
3300027957\|Ga0209857_1008243	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300028047\|Ga0209526_10348580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	992	Open in IMG/M
3300030006\|Ga0299907_10784321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300030635\|Ga0247627_10104628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300031720\|Ga0307469_10408952	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300031820\|Ga0307473_10189333	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300031890\|Ga0306925_10985033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	861	Open in IMG/M
3300031947\|Ga0310909_10921774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300031949\|Ga0214473_10446592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1452	Open in IMG/M
3300031965\|Ga0326597_10808537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	971	Open in IMG/M
3300032000\|Ga0310903_10587984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300032174\|Ga0307470_10269356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1136	Open in IMG/M
3300032180\|Ga0307471_100454708	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300032180\|Ga0307471_101015093	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300032261\|Ga0306920_102163529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	775	Open in IMG/M
3300033433\|Ga0326726_11169857	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300034148\|Ga0364927_0005269	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.61%
Host-Associated	Host-Associated	13.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.79%
Aquatic	Environmental → Aquatic	34.82%
Plants	Host-Associated → Plants	13.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Sediment	Environmental → Aquatic → Sediment	15.18%
Freshwater	Environmental → Aquatic → Freshwater	11.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.46%
Marine	Environmental → Aquatic → Marine	2.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Roots	Host-Associated → Plants → Roots	1.79%
Unclassified	Environmental → Aquatic → Unclassified	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Floodplain	Environmental → Terrestrial → Floodplain	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.18%
Sand	Environmental → Terrestrial → Soil → Sand	13.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.93%
Loam	Environmental → Terrestrial → Soil → Loam	4.46%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.79%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment	0.89%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.18%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	13.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.89%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	13.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.68%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.79%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.79%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009514	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - F-1W	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022209	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0493.00000250	2162886007	Switchgrass Rhizosphere	NTSPDGYYPTEGGFMNVIVLIVVGGLTGWLTGKAVEVEGRTVVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS
FD1_11295660	2170459024	Grass Soil	VNVIIRIIVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGAMIGEYLFFWIVIGNGNALSSYATAVLGAITLVGAARLLAARWHRVRS
F24TB_100702151	3300000550	Soil	TGKAVEVEGRTIVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS*
JGI1357J11328_102062641	3300000574	Groundwater	SLKPLRRSRLRPLGFTQENIMTVIVQIVIGALAGWLTGKAVEVEGRVKVVREGHVLDAIYGIAGAMVGEHLFFWIIIGKGNAFSDFATAVLGSITIVGVARLIAAGRAPLSSK*
KanNP_Total_noBrdU_T14TCDRAFT_10073652	3300000596	Soil	MNVIVLIVVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGVIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS*
JGIcombinedJ43975_100605912	3300002899	Soil	MNVIVLIVVGGLTGWLTGKAVEVEGRTVVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRV
JGIcombinedJ43975_100636331	3300002899	Soil	MNVIVLIVVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS*
JGI25407J50210_101050211	3300003373	Tabebuia Heterophylla Rhizosphere	MNIIVLIVLGGLTGWLTGKAVEAEGRMNVVRQGHVIDAIYGIIGALIGKYLFFWIVIGQDNAFSSYATAVLGSITLVG
Ga0055468_100895482	3300003993	Natural And Restored Wetlands	MNIIILIVVGACTGWLTGKAVEVEGRITVVREGHVIDAIYGIIGALIGKYLFFWIVIGQGNAFSSYATAVLGSITLVGAARQAGMGLRTLRRR*
Ga0055439_100511761	3300004019	Natural And Restored Wetlands	MNIIVRILIGGLTGWLTGKAVEVEGRRIVVKESHVIDAFYGIIGALIGDYLFFWIVIGKGSAFSSYATAVLGSVTLVGAARLLAARWHRVRS*
Ga0070668_1022115121	3300005347	Switchgrass Rhizosphere	VNVIIRIIVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGAMIGEYLFFWIVIGKGNALSSYATAVLGAITLVGAARLLAARWHRVRS*
Ga0070708_1015705691	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTPSPGRNYGMQEGGFMNVIVRIVIGGITGWLTGKLVEIEGREKVVSEGHVFDIVYGIVGAIAGEYLFFWIVIGKGNAFSDFATTILGSITLV
Ga0066686_106447811	3300005446	Soil	MNVIARILVGGLTGWLTGKAVEIEGHGNVVREGHVLDAIYGIVGAMVGEYLFFWIVIGKGNAFSSYATAVLGSITLVGAARLLAARLRLARSYKRNT
Ga0070697_1017934012	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VNVIVRILVGGITGWLTGKAVEIEGRVKVVREGHVLDMIYGIVGAMVGEYLFFWIVIGNGNALSDYATMVLGSITVVGAARLLAARWLLA*
Ga0066692_106037993	3300005555	Soil	VNVIVRIIVGALTGWLTGKAVEVEGRINVVKEGHVIDAVYGIIGALLGDYLFFWIVIGQGNTLSSYATAVLGAITLVGAARLLAARWHRVRS*
Ga0081455_101632683	3300005937	Tabebuia Heterophylla Rhizosphere	MNVIVLILVGGLTGWLTGKAVEAEGRTIIVREGHVIDVICGIIGALTGEYLFFWLIIGQGNAFSSYATAVLGSITLVGAARLLTAR*
Ga0081538_100587434	3300005981	Tabebuia Heterophylla Rhizosphere	MNIIVLIVLGGLTGWLTGKAVEAEGRMNVVRQGHVIDAIYGIIGALIGKYLFFWIVIGQDNAFSSYATAVLGSITLVGAARLLAARWYRVRS*
Ga0075417_100678862	3300006049	Populus Rhizosphere	VNVIVRIIVGALTGWLTGKAVEVEGRIKVVKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0066659_114801001	3300006797	Soil	VNVIVRIIVGALTGWWTGKAVEVEGRINVVKEGHVTDVFYGIIGALIGDYLFFWIVIGKGNALSSYATAVLGSITLVGAARL
Ga0075430_1011378001	3300006846	Populus Rhizosphere	GGNTSPDRYYRTEGGFVNVIVRIIVGALTGWLTGKAVEVEGRIKVVKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0075425_1015875241	3300006854	Populus Rhizosphere	VDVIIRIIIGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGAMIGEYLFFWIVIGNGNALSSYATAVLGAITLVGAARLLAARWHRVRS*
Ga0073934_100190446	3300006865	Hot Spring Sediment	MNIIVRIVVGGISGWLTGKLLETEGRIKVVKEGHVLDAIYGIVGGIFGKFLFFWVVIGKGDTFSDYAMTMLGSVTVVGAARFFAERWRRARS*
Ga0075434_1013459721	3300006871	Populus Rhizosphere	VNVIVRIIVGALTGWLTGKAVEVEGRIKVMKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITL
Ga0075429_1004121262	3300006880	Populus Rhizosphere	VNVIVRIIVGALTGWLTGKAVEVEGRIKVMKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0075424_1001210981	3300006904	Populus Rhizosphere	MNIIVRILVGALAGWLTGKAVEVAGRVNVVREGHVLDAIYGVVGAMLGEYLFFWIVVGKGNAFSNYATMILGSITFVGAARLLIARFRRARSYKKKTSPSSFGIGQ
Ga0105098_100315562	3300009081	Freshwater Sediment	MNVIVLMVVGGLTGWLTGKAVEVEGRMNVVKESHVIDAFYGIIGALIGKYLFFWIVIGQGNAFSRYATAVLGSITLVGAARLLAARWHRV*
Ga0099827_112483072	3300009090	Vadose Zone Soil	MNVIARILVGGLTGWLTGKAVEIEGHGNVVREGHVLDAIYGIVGAMVGEYLFFWIVIGKGNAFSSYATAVLGSITLVGAARLLAARLRLARSYKRNTSPS
Ga0099827_116346081	3300009090	Vadose Zone Soil	MNVIAQILVGGISGWLTGKAVEVADRIDVVREGHGWDAIYGVVGAMVGEYLFFWIVIGKGNAFSDYATMVLGSITVVGAARLLLARFRLA
Ga0111538_130053722	3300009156	Populus Rhizosphere	LTGKAVEVEGRTIVVKESHVTDAVYGIIGAMIGEYLFFWIVIGKGNALSSYATAVLGAITLVGAARLLAARWHRVRS*
Ga0105092_101134182	3300009157	Freshwater Sediment	MVGALTGWLTGKAVEVEGRVTVVREGHVTDVIYGIIGALIGEYLFFWIVIGQGNTLSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0105092_101588251	3300009157	Freshwater Sediment	MEGGFMNFIVLIIVGALTGWLTGKAVEVEGRIKVVKESHVIDTFYGIIGALIGEYLFFWMVIGQGNAFSRYATAVLGSITLVGTARLLAARWHRVRS*
Ga0105092_103888151	3300009157	Freshwater Sediment	MEGGFMSVIVLIILGALTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0075423_100982715	3300009162	Populus Rhizosphere	MNIIVRILVGALAGWLTGKAVEVAGRVNVAREGHVWDAIYGVVGAMFGEYLFFWIVIGKGNAFSNYATMVLGSITFVGAARLLVARFRRARSYKKNTSRSSFGIGQLNPIAE*
Ga0105104_101218972	3300009168	Freshwater Sediment	MNVIVLIVVGGLTGWLTGKAVEVEGRTVVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0114945_103536491	3300009444	Thermal Springs	MNVLVQILVGGLTGWLTGKAVEIEGHEKVVREGHVLDTIYGIVGAMVGEYLFFWIVIGKGDAFSDYATMVLGSITLVGAARLLAARWPLARS*
Ga0129284_103221922	3300009514	Beach Aquifer Porewater	MNIIVQILVGGLTGWLTGKALEIEGRLNVVKEGHVLDAIYGMVGAMVGKHLFFWAVIRKGDAFSDYATMVLGSITIVGAARLIAQRWRVAGS*
Ga0114944_13651391	3300009691	Thermal Springs	MNVIVQILVGGLTGWLTGKAVEIEGHAKVVREGHVLDMIYGIVGAMVGEYLFFWIVIGKGNAFSDYATTVLGAITVVGAARLLAARWRLVR
Ga0105056_10105571	3300009801	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRTVVVKESHVTDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAVLGSITLVGVARLLAARWHRVRS*
Ga0105061_10027713	3300009807	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGVARLLAARWHRVRS*
Ga0105088_10023143	3300009810	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAIYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGVARLLAARWHRVRS*
Ga0105070_10039653	3300009815	Groundwater Sand	MNLIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGVARLLAARWHRVRS*
Ga0105072_10083752	3300009818	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVRESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAVLGSITLVGVARLLAARWHRVRS*
Ga0105068_10034192	3300009836	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAIYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGAARLLAARWHRVRS*
Ga0105058_10096891	3300009837	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVRESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGVARLLAARWHRVRS*
Ga0105074_10140562	3300010029	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAVLGSITLVGVARLLAARWHRVRS*
Ga0134111_100044345	3300010329	Grasslands Soil	MQEGFMNVIARILVGGLTGWLTGKAVEIEGHGNVVREGHVLDAIYGIVGAMVGEYLFFWIVIGKGNAFSSYATAVLGSITLV
Ga0137380_105570051	3300012206	Vadose Zone Soil	VNVIVRIIIGALTGWLTGKAVEVEGRIKVVKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSTTLVGAARLLAARWHRVRS*
Ga0137380_110954161	3300012206	Vadose Zone Soil	MQEGGFMNVIVRIVIGAITGWLTGKLVEIEGREKVVSEGHVLDIVYGIVGAIAGEYLFFWIVIGKGNAFSDFATTILGSITLVG
Ga0137379_109806582	3300012209	Vadose Zone Soil	LTGKAVEVEGRIKVVKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0134032_11011831	3300012376	Grasslands Soil	MQEGFMNVIARILVGGLTGWLTGKAVEIEGHGNVVREGHVLDAIYGIVGAMVGEYLFFWIVIDKGNAFSSYATAVLGSITLVGAALLLAARLRLARSYK
Ga0137394_104367033	3300012922	Vadose Zone Soil	MNVIVRIIVGGLTGWLTGKAVEVEGRINVVREGHAIDTIYGIIGAMIGEYLFFWIVIGQGNALSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0137404_103338791	3300012929	Vadose Zone Soil	EGCFVNVIVRIIVGALTGWLTGKAVDVEGRIKVVKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0137407_101165751	3300012930	Vadose Zone Soil	VNVIVRIIVGALTGWLTGKAVEVEGRINVVKEGHVIDAVYGIIGALLGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS*
Ga0164300_103089482	3300012951	Soil	VNVIIRIIVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNTLSSYATAVLGAITLVGAARLLAARWHRVRS*
Ga0153916_100020834	3300012964	Freshwater Wetlands	MNVMVRILIGGLTGWVTGKVIEKEGRVRVIREGNHFDTIYGGVGALVGEYLFFWIVIGKYNAFNDYATAILGSIAFVGAARLIAAGC*
Ga0180086_10565901	3300014883	Soil	MPEVFMNLIVRIFVGALTGWLTGKAVEAEGRVNVVREGHLLDTIYGIIGALIGEPLFFWIVIGKGSTMSDLLTTILGSITVVGVARLVTDRWRRVQS*
Ga0180093_10435422	3300015258	Soil	MPEVFMNLIIQILVGALTGWLTGKVVEVEARVNVVKKGHLLDTFYGIIGALIGKHLFFWIVIGKGSTMSDLLTAILGSITVVGAARLLTDRWRRVQY*
Ga0182036_117036191	3300016270	Soil	VNVIVRIIIGALTGWLTGKAVEVEGRIHVVKEGHVIDAVYGIIGALIGDYLFFWIVVGKGNALSSYATVVLGSITLVGAARLLAARWHRLRS
Ga0182033_101916891	3300016319	Soil	VNVIVRIIVGALTGWLTGKAVEVEGRIHVVKEGHVIDAVYGIIGALIGDYLFFWIVVGKGNALSSYATAVLGSITLVGAARMLAARWHRVRS
Ga0182032_100587821	3300016357	Soil	VNVIVRIIIGALTGWLTGKAVEVEGRIHVVKEGHVIDAVYGIIGALLGDYLFFWIVVGKGNALSSYATAVLGSITLVGAARLLAARWHRLRS
Ga0182038_110288222	3300016445	Soil	VNVIVRIIIGALTGWLTGKAVEVEGRIHVVKEGHVIDAVYGIIGALIGDYLFFWIVVGKGNALSSYATVVLGSIALVGAARLLAARWHRLRS
Ga0134074_13325181	3300017657	Grasslands Soil	MNVIAQILVGGLTGWLTGKAVEIEGHGNVVREGHVLDAIYGIVGAMVGEYLFFWIVIGKGNAFSDFATTILGSITLVGAGRLLASRWLF
Ga0184626_102630031	3300018053	Groundwater Sediment	EGRFMNVIVLIIVGALTGWLTGKAVEVEGRINVVKEGHVIDAVYGIIGALLGDYLFFWIVIGQGNTLSSYATAVLGAITLVGAARLLAARWHRVRS
Ga0184623_100105311	3300018056	Groundwater Sediment	MNLIVQILVGALTGWLTGKAVEVEGRVNVVREGHVLDVIYGSIGALIGEHLFFWIVIGKGNTLSDLLTAILGSITVVGAARL
Ga0184615_102485701	3300018059	Groundwater Sediment	MNLIVRIFVGALTGWLTGKAVEAEGRVNVVREGHLLDTIYGIIGALIGEPLFFWIVIGKGSTMSDLLTTILGSITVVGVARLVTDRWRRVQS
Ga0184637_102474012	3300018063	Groundwater Sediment	MNVIVRIVSGGLAGWLTGKAVEVEGRVKVVSEGHVLDAIYGIVGAMVGEYLFFWIVIGKGNAFSEFATAVLGSVTIVGVARLIAAGRVPLSSK
Ga0184636_12230472	3300018068	Groundwater Sediment	MNLIVQILVGALTGWLTGKAVEAEGRVNVVREGHLLDTIYGIIGALIGEHLFFWVVIGKGSAVSDLLTAILGSITVVGTARLLTDRWRRVRS
Ga0184636_13191001	3300018068	Groundwater Sediment	MNVIVRIVIGGLAGGLTGKAVEVENRVKVVREGHVLDAIYGIAGAMVGEYLFFWIVIGKGNAFSDFATAVLGSVTIVGVARLIAAGRSP
Ga0184635_100127902	3300018072	Groundwater Sediment	VNVIIRIIVGGLTGWLTGKAVEVEGRTIVVKESHVIDAVYGIIGAMIGEYLFFWMVIGQGNALSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0184635_100253403	3300018072	Groundwater Sediment	VNVIVRIIVGALTGWLTGKAVEVEGRINVVKEGHVIDAVYGIIGALLGDYLFFWIVIGQGNTLSSYATAVLGAITLVGAARLLAARWHRVRS
Ga0184624_100492072	3300018073	Groundwater Sediment	VNVIIRIIVGGLTGWLTGKAVEVEGRINVVKEGHVIDAVYGIIGSMIGEYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0184632_100581331	3300018075	Groundwater Sediment	MNFIFRIVIGALTGWLTGKLVEIEGRSKVLGEGHVLDVIYGIVGGMAGEYLFFWIVIGKGNGFSDFATAVLGSITIVG
Ga0184609_102150712	3300018076	Groundwater Sediment	VNVIIRIIVGALTGWLTGKAVEVEGRINVVKEGHVIDAVYGIIGALLGDYLFFWMVIGKGNALSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0184625_100584324	3300018081	Groundwater Sediment	VNVIIRIIVGGLTGWLTGKAVEVEGRTIVVKESHVIDAVYGIIGAMIGEYLFFWIVIGQGNALSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0184625_101510952	3300018081	Groundwater Sediment	YQTEGRFVNVIVRIIVGALTGWLTGKAVEVEGRTIVVKESHVIDAVYGIIGAMLGDYLFFWMVIGQGNTLSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0184629_100373013	3300018084	Groundwater Sediment	MNVIVRIVSGALAGWMMGKAVEVEGRAEVVREGHVLDAIYGIVGAMVGEYLFFWIVIGKGNAFSDFATAVLGSVTIVGVARLIAAGRSPLSSK
Ga0066662_101268413	3300018468	Grasslands Soil	MNVIARILVGGLTGWLTGKAVEIESHGNVVREGHVLHAIYGIVGAMVGEYLFFWIVIGKGNAFSSYATAVLGSITLV
Ga0180115_13769342	3300019257	Groundwater Sediment	VNVIIRIIVGGLTGWLTGKAVEVEGRTIVVKESHVIDAVYGIIGAMVGEYLFFWIVIGQGNALSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0180113_12788501	3300020065	Groundwater Sediment	MNLIIQILVGALTGWLTGKVVEVEARVNVVKKGHLLDTFYGIIGALIGKHLFFWIVIGKGSTMSDLLTAILGSITVVGAARLLTDRWRRVQY
Ga0180109_11461091	3300020067	Groundwater Sediment	MNVIVRIVSGALAGWMMGKAVEVEGRAEVVREGHVLDAIYGIVGAMVGEYLFFWIVIGKGNAFSDFATAVLGSVTIVGVARLIAAGRSPLSS
Ga0224497_100495685	3300022209	Sediment	MSFIVQILVGALTGWLTGKAVEVEGRLNVERGGHVLDTIYGIIGALIGKHLFFWIVIGKGSAVSDFATTILGAITLVGAARLITDRWRRIQS
Ga0224452_10924642	3300022534	Groundwater Sediment	VNVIIRIIVGALTGWLTGKAVEVEGRINVVKEGHVIDAVYGIIGALLGDYLFFWIVIGQGNTLSSYATAVLGAITLVGAARLLAARWHRVRS
Ga0212128_102437571	3300022563	Thermal Springs	MNVLVQILVGGLTGWLTGKAVEIEGHEKVVREGHVLDTIYGIVGAMVGEYLFFWIVIGKGDAFSDYATMVLGSITLVGAARLLAARWPLARS
Ga0209172_1000364422	3300025310	Hot Spring Sediment	MNIIVRIVVGGISGWLTGKLLETEGRIKVVKEGHVLDAIYGIVGGIFGKFLFFWVVIGKGDTFSDYAMTMLGSVTVVGAARFFAERWRRARS
Ga0209896_10033643	3300027006	Groundwater Sand	MNLIVLIVVGGLTGWLTGKAVEVEGRITVVRESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAVLGSITLVGVARLLAARWHRVRS
Ga0209875_10039951	3300027209	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGVARLLAARWHRVRS
Ga0209846_10019146	3300027277	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAIYGIIGALVGDYLFFWMVIGKGNAFSSYATAVLGSITLVGVARLLAARWHRVRS
Ga0209843_10239822	3300027511	Groundwater Sand	MNLIVLIVVGGLTGWLTGKAVEVEGRITVVKESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGVARLLAARWHRVRS
Ga0209887_10002494	3300027561	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVRESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAVLGSITLVGVARLLAARWHRVRS
Ga0209819_100064182	3300027722	Freshwater Sediment	MNVIVLMVVGGLTGWLTGKAVEVEGRMNVVKESHVIDAFYGIIGALIGKYLFFWIVIGQGNAFSRYATAVLGSITLVGAARLLAARWHRV
Ga0209819_102601192	3300027722	Freshwater Sediment	MNFIVLIIVGALTGWLTGKAVEVEGRIKVVKESHVIDTFYGIIGALIGEYLFFWMVIGQGNAFSRYATAVLGSITLVGTARLLAARWHRVRS
Ga0209593_102167331	3300027743	Freshwater Sediment	MNVIVLIVVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0209814_101026443	3300027873	Populus Rhizosphere	VNVIVRIIVGALTGWLTGKAVEVEGRIKVMKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0209382_105496102	3300027909	Populus Rhizosphere	VNVIVRIIVGALTGWLTGKAVEVEGRIKVVKESHVIDAFYGIIGALIGDYLFFWIVIDKGNALSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0209889_10028626	3300027952	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVRESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVGVARLLAARWHRVRS
Ga0209857_10082431	3300027957	Groundwater Sand	MNVIVLIVVGGLTGWLTGKAVEVEGRITVVRESHVIDAVYGIIGALVGDYLFFWMVIGKGNAFSSYATAILGSITLVG
Ga0209526_103485802	3300028047	Forest Soil	MNVIVRILVGALTGWLTGKAVEVAGRVNVVREGHVLDAIYGVVGAMLGEYLFFWIVVGKGNAFSNYATMVLGSVTFVGAARLLIARFRLARSYK
Ga0299907_107843212	3300030006	Soil	MNPIVQILVGALAGWLTGKAVEIEGRTRIVRERHILDTIYGIIGALIGEHLFFWIVIGKGSSVSDFATAILGSITVVGAARLVTDRWRRLQS
Ga0247627_101046282	3300030635	Soil	LNLIVQILVGALTGWLTGKVVEAEARVNVVKNGHVLDTIYGIIGALIGKHLFFWIVIGKGSTMSDLLTAILGSITVVGAARLLTDRWEGTKK
Ga0307469_104089522	3300031720	Hardwood Forest Soil	IVLIIVGALAGWLTGKAVEVEGRTIVVKESHVTDAVYGVIGALIGQYLFFWIVIGQGNAFSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0307473_101893331	3300031820	Hardwood Forest Soil	MNIIVRVLVGALAGWLTGKAVEVAGRVNVVREGHVLDAIYGVVGAMLGEYLFFWIVVGKGNAFSNYATMVLGSVTFVGA
Ga0306925_109850332	3300031890	Soil	NVIVRIIVGALTGWLTGKAVEVEGRIHVVKEGHVIDAVDGIIGALIGDYLFFWIVVGKGNALSSYATVVLGSIALVGAARLLAARWHRLRS
Ga0310909_109217742	3300031947	Soil	VNVIVRIIIGALTGWLTGKAVEVEGRIHVVKEGHVIDAVYGIIGALIGDYLFFWIVVGKGNALSSYATVVLGSITLVGAARLLATRWHRLRS
Ga0214473_104465921	3300031949	Soil	MNLIVQILVGALTGWLTGKAVEVEGRVNVVREGHLLDTIYGIIGALIGEPLFFWIVIGKGSTMSDLLTTILGSITVVGVARLATDRWRRVQS
Ga0326597_108085371	3300031965	Soil	RNSPLNRTLAMPEGFMNLIVQILVGALTGWLTGKAVEVEGRVNVVREGHLLDTIYGIIGALIGEPLFFWIVIGKGSTMSDLLTTILGSITVVGVARLATDRWRRVQS
Ga0310903_105879841	3300032000	Soil	MEISSPKGEQDLVVGSPDRYLRTEGGFMNLILRIVVGGLTGWLTGKAVEVEGRITVVREGHVTDAIYGIIGAMLGEYLFFWIVIGQGNVLSTYATAILGSITLVGAARLLAARWHRVRS
Ga0307470_102693562	3300032174	Hardwood Forest Soil	IRIIVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGAMIGEYLFFWIVIGKGNALSSYATAVLGAITLVGAARLLAARWHRVRS
Ga0307471_1004547082	3300032180	Hardwood Forest Soil	VNVIIRIIVGGLTGWLTGKAVEVEGRTIVVKESHVTDAVYGIIGAMIGEYLFFWIVIGKGNALSSYATAVLGAITLVGAARLLAARWHRVRS
Ga0307471_1010150931	3300032180	Hardwood Forest Soil	RIIIGALTGWLTGKAVEVEGRINVVKEGHITDVFYGIIGALIGDYLFFWIVIGKGNALSSYATAVLGSITLVGAARLLAARWHRVRS
Ga0306920_1021635291	3300032261	Soil	VNVIVRIIIGALTGWLTGKAVEVEGRIHVVKEGHVIDAVDGIIGALIGDYLFFWIVVGKGNALSSYATAVLGSITLVGAARLLAARWHRLRS
Ga0326726_111698572	3300033433	Peat Soil	MNVIVRIIVGGLTGWLTGKAVEVEGRITVVKESHVIDAVYGIIGAMIGEYLFFWIVIGQGNALSSYATAVLGSITL
Ga0364927_0005269_1900_2193	3300034148	Sediment	MPEVFMNLIIQILVGALTGWLTGKVVEVEARVNVVKKGHLLDTFYGIIGALIGKHLFFWIVIGKGSTMSDLLTAILGSITVVGAARLLTDRWRRVQY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083959

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences