Metagenome / Metatranscriptome Family F083905

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083905
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	75 residues
Representative Sequence	MQTRQARADLMAYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEIVGRTVAVKAA
Number of Associated Samples	88
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.14 %
% of genes near scaffold ends (potentially truncated)	16.96 %
% of genes from short scaffolds (< 2000 bps)	73.21 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (17.857 % of family members)
Environment Ontology (ENVO)	Unclassified (49.107 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.86% β-sheet: 35.29% Coil/Unstructured: 57.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.11.0: automated matches	d2hbwa1	2hbw	0.72918
b.34.2.0: automated matches	d2j6ka_	2j6k	0.66635
b.34.2.1: SH3-domain	d2v1ra_	2v1r	0.66264
b.34.2.1: SH3-domain	d1k9ab1	1k9a	0.65752
b.34.2.1: SH3-domain	d1jo8a_	1jo8	0.64757

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF11154	DUF2934	6.31
PF01436	NHL	1.80
PF02954	HTH_8	1.80
PF00076	RRM_1	1.80
PF13450	NAD_binding_8	1.80
PF13490	zf-HC2	1.80
PF13083	KH_4	0.90
PF07971	Glyco_hydro_92	0.90
PF09250	Prim-Pol	0.90
PF04366	Ysc84	0.90
PF05569	Peptidase_M56	0.90
PF13533	Biotin_lipoyl_2	0.90
PF02321	OEP	0.90
PF13535	ATP-grasp_4	0.90
PF02417	Chromate_transp	0.90
PF03965	Penicillinase_R	0.90
PF04932	Wzy_C	0.90
PF01782	RimM	0.90
PF03544	TonB_C	0.90
PF13180	PDZ_2	0.90
PF00027	cNMP_binding	0.90
PF13545	HTH_Crp_2	0.90
PF13579	Glyco_trans_4_4	0.90
PF07228	SpoIIE	0.90
PF14698	ASL_C2	0.90
PF00873	ACR_tran	0.90
PF00072	Response_reg	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.80
COG0806	Ribosomal 30S subunit maturation factor RimM, required for 16S rRNA processing	Translation, ribosomal structure and biogenesis [J]	0.90
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.90
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.90
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.90
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG3537	Putative alpha-1,2-mannosidase	Carbohydrate transport and metabolism [G]	0.90
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.18 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	58.04 %
Unclassified	root	N/A	21.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	29.46 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	25.00 %
Unclassified	root	N/A	21.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	28.57 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	22.32 %
Unclassified	root	N/A	21.43 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	28.57 %
Unclassified	root	N/A	21.43 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	16.07 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	5.36 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	28.57 %
Unclassified	root	N/A	21.43 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	14.29 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5.36 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	28.57 %
Unclassified	root	N/A	21.43 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	12.50 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5.36 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2.68 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10278112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	572	Open in IMG/M
3300004473\|Ga0068919_1222314	Not Available	662	Open in IMG/M
3300004603\|Ga0068918_1264443	Not Available	654	Open in IMG/M
3300004803\|Ga0058862_11652935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	791	Open in IMG/M
3300005436\|Ga0070713_101393596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005529\|Ga0070741_10007223	All Organisms → cellular organisms → Bacteria	23193	Open in IMG/M
3300005529\|Ga0070741_10352220	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300005531\|Ga0070738_10000188	All Organisms → cellular organisms → Bacteria	194040	Open in IMG/M
3300005532\|Ga0070739_10236978	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300005532\|Ga0070739_10466479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	575	Open in IMG/M
3300005533\|Ga0070734_10004863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12347	Open in IMG/M
3300005534\|Ga0070735_10171995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1336	Open in IMG/M
3300005537\|Ga0070730_10337537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	982	Open in IMG/M
3300005841\|Ga0068863_101020412	Not Available	830	Open in IMG/M
3300005938\|Ga0066795_10067827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1056	Open in IMG/M
3300005947\|Ga0066794_10094971	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	891	Open in IMG/M
3300006052\|Ga0075029_100000838	All Organisms → cellular organisms → Bacteria	17671	Open in IMG/M
3300006162\|Ga0075030_100204403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1590	Open in IMG/M
3300006804\|Ga0079221_10834034	Not Available	666	Open in IMG/M
3300009029\|Ga0066793_10110607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1595	Open in IMG/M
3300009547\|Ga0116136_1007312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	4326	Open in IMG/M
3300009639\|Ga0116122_1129321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	810	Open in IMG/M
3300009839\|Ga0116223_10072428	Not Available	2209	Open in IMG/M
3300010379\|Ga0136449_100016460	All Organisms → cellular organisms → Bacteria → Acidobacteria	19454	Open in IMG/M
3300010379\|Ga0136449_100182340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	4036	Open in IMG/M
3300010379\|Ga0136449_100202375	All Organisms → cellular organisms → Bacteria	3774	Open in IMG/M
3300011074\|Ga0138559_1048586	Not Available	750	Open in IMG/M
3300011083\|Ga0138560_1061047	Not Available	914	Open in IMG/M
3300011120\|Ga0150983_12465004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2411	Open in IMG/M
3300012210\|Ga0137378_11840348	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300014152\|Ga0181533_1150851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	950	Open in IMG/M
3300014153\|Ga0181527_1031960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	3111	Open in IMG/M
3300014155\|Ga0181524_10125675	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300014160\|Ga0181517_10386125	Not Available	721	Open in IMG/M
3300014160\|Ga0181517_10590167	Not Available	557	Open in IMG/M
3300014161\|Ga0181529_10340832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	825	Open in IMG/M
3300014162\|Ga0181538_10115676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1566	Open in IMG/M
3300014167\|Ga0181528_10071210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1907	Open in IMG/M
3300014199\|Ga0181535_10046120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	3045	Open in IMG/M
3300014199\|Ga0181535_10452480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	747	Open in IMG/M
3300014491\|Ga0182014_10152720	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300014491\|Ga0182014_10378149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	711	Open in IMG/M
3300014492\|Ga0182013_10014518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7696	Open in IMG/M
3300014492\|Ga0182013_10630062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	544	Open in IMG/M
3300014493\|Ga0182016_10562176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	652	Open in IMG/M
3300014496\|Ga0182011_10631438	Not Available	680	Open in IMG/M
3300014501\|Ga0182024_11529555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	760	Open in IMG/M
3300014501\|Ga0182024_11757099	Not Available	696	Open in IMG/M
3300014839\|Ga0182027_10436547	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300016701\|Ga0181509_1227706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	531	Open in IMG/M
3300016730\|Ga0181515_1459854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	588	Open in IMG/M
3300017925\|Ga0187856_1005489	All Organisms → cellular organisms → Bacteria → Acidobacteria	8138	Open in IMG/M
3300017925\|Ga0187856_1040424	Not Available	2122	Open in IMG/M
3300017946\|Ga0187879_10392255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	769	Open in IMG/M
3300017948\|Ga0187847_10397317	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	757	Open in IMG/M
3300017988\|Ga0181520_10032161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5464	Open in IMG/M
3300017988\|Ga0181520_10036694	All Organisms → cellular organisms → Bacteria	4971	Open in IMG/M
3300017988\|Ga0181520_10157420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1839	Open in IMG/M
3300017988\|Ga0181520_10548976	Not Available	810	Open in IMG/M
3300017988\|Ga0181520_10583347	Not Available	778	Open in IMG/M
3300018009\|Ga0187884_10077834	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300018014\|Ga0187860_1116227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1191	Open in IMG/M
3300018016\|Ga0187880_1143431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1129	Open in IMG/M
3300018017\|Ga0187872_10033485	All Organisms → cellular organisms → Bacteria → Acidobacteria	2852	Open in IMG/M
3300018026\|Ga0187857_10448506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	580	Open in IMG/M
3300018034\|Ga0187863_10117742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1486	Open in IMG/M
3300018042\|Ga0187871_10653884	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	584	Open in IMG/M
3300018043\|Ga0187887_10270279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1005	Open in IMG/M
3300018047\|Ga0187859_10134625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1306	Open in IMG/M
3300018047\|Ga0187859_10466974	Not Available	699	Open in IMG/M
3300018057\|Ga0187858_10516767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	728	Open in IMG/M
3300019230\|Ga0181501_1381779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	724	Open in IMG/M
3300019242\|Ga0181502_1201245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	992	Open in IMG/M
3300019256\|Ga0181508_1570190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1009	Open in IMG/M
3300020069\|Ga0197907_11467014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	587	Open in IMG/M
3300021404\|Ga0210389_11238476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	573	Open in IMG/M
3300021559\|Ga0210409_10976723	Not Available	721	Open in IMG/M
3300023088\|Ga0224555_1036476	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300023088\|Ga0224555_1036627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	1978	Open in IMG/M
3300023088\|Ga0224555_1156997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	654	Open in IMG/M
3300025888\|Ga0209540_10377009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	781	Open in IMG/M
3300026223\|Ga0209840_1058337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	858	Open in IMG/M
3300026551\|Ga0209648_10051337	All Organisms → cellular organisms → Bacteria	3531	Open in IMG/M
3300026551\|Ga0209648_10401783	Not Available	898	Open in IMG/M
3300026551\|Ga0209648_10513855	Not Available	686	Open in IMG/M
3300027706\|Ga0209581_1000134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	234899	Open in IMG/M
3300027826\|Ga0209060_10001896	All Organisms → cellular organisms → Bacteria → Acidobacteria	20987	Open in IMG/M
3300027854\|Ga0209517_10453813	Not Available	708	Open in IMG/M
3300027898\|Ga0209067_10001834	All Organisms → cellular organisms → Bacteria	12872	Open in IMG/M
3300027911\|Ga0209698_10847657	Not Available	688	Open in IMG/M
3300029999\|Ga0311339_10355547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1547	Open in IMG/M
3300030399\|Ga0311353_11671031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	512	Open in IMG/M
3300030659\|Ga0316363_10367121	Not Available	564	Open in IMG/M
3300031057\|Ga0170834_100817168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	853	Open in IMG/M
3300031236\|Ga0302324_101658120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	821	Open in IMG/M
3300031524\|Ga0302320_10069542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5985	Open in IMG/M
3300031524\|Ga0302320_10311845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2077	Open in IMG/M
3300032160\|Ga0311301_11462785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	846	Open in IMG/M
3300032515\|Ga0348332_13045952	Not Available	505	Open in IMG/M
3300032783\|Ga0335079_10035487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5726	Open in IMG/M
3300032805\|Ga0335078_10069979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5130	Open in IMG/M
3300032892\|Ga0335081_10879269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1060	Open in IMG/M
3300032893\|Ga0335069_10067714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4606	Open in IMG/M
3300032893\|Ga0335069_10067714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4606	Open in IMG/M
3300033402\|Ga0326728_10671125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	786	Open in IMG/M
3300033402\|Ga0326728_10757422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	716	Open in IMG/M
3300033405\|Ga0326727_10777829	Not Available	744	Open in IMG/M
3300033475\|Ga0310811_10810510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	871	Open in IMG/M
3300033887\|Ga0334790_020838	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300033888\|Ga0334792_012586	All Organisms → cellular organisms → Bacteria	3264	Open in IMG/M
3300033888\|Ga0334792_058028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300033888\|Ga0334792_094595	Not Available	836	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.61%
Aquatic	Environmental → Aquatic	36.61%
Human	Host-Associated → Human	0.89%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.32%
Freshwater	Environmental → Aquatic → Freshwater	33.04%
Peat	Environmental → Terrestrial → Peat	13.39%
Sediment	Environmental → Aquatic → Sediment	3.57%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%
Digestive System	Host-Associated → Human → Digestive System	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Loam	Environmental → Terrestrial → Soil → Loam	1.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	31.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	13.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.46%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.79%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004603	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011074	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011083	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019230	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_102781121	3300002914	Grasslands Soil	MQTRQARAELTAYTLELKKRTIPAHAVLHDFRVGLGHEGLAPHNPDVASFRYEGRVYFNVIHEIVGRTVIVNVA*
Ga0068919_12223141	3300004473	Peatlands Soil	ALADLTAYTMDLRRRTIPTNAILHDFRSGPGHEGLAQHNPDVASFHYDGEVHFNLAHEIVGKTVIVQAA*
Ga0068918_12644432	3300004603	Peatlands Soil	ADLTAYTMNLRRRTIPTNAILHDFRSGPGHEGLAQHNPDVASFHYDGEVHFNLAHEIVGKTVIVQAA*
Ga0058862_116529352	3300004803	Host-Associated	MQTRQARADLTAFTMDLRRRTIPANAILHDFRTGPGHEGLLPNKPDIVSFHYDGELYFNMLHEIIDKTVIVNVSST*
Ga0070713_1013935962	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQIRQATADLAVFTSGLKKRIIPAKAILHDFRIGPGHEGLSPHNPDVVSFHYEGEIYFNVKHEIVERTVIVGAGSSPILDLG*
Ga0070741_100072234	3300005529	Surface Soil	MQTRQATAELSVYTSNLKKRKIPANAILHDFRIGPGHEGLAPHNPDVASFHYQGEVYFNITHEILGRTVIVSAGSSPLSEL*
Ga0070741_103522202	3300005529	Surface Soil	MQIRQATAELSVYTAKLKKKKIPANAILHDFRIGPGHEGLAPHNPDVVSFHYDGEIYFNISNEIIGSTVIVNAGSSALPEI*
Ga0070738_10000188165	3300005531	Surface Soil	MQIRQATADLSVYTSKLKKRTIPAKAILHDFRVGPGHEGLAPHNPDVVSFHYEGEIYFNVSEEILGHTVIVSAGSTSPFSE*
Ga0070739_102369782	3300005532	Surface Soil	MQIRQATADFPAYTSKLKKRTIPAKAILHDFRTGPGHQGLSPHNPDVASFHYEGEIYFNVTHEVLDRTVIVSVGGSSPLPEM*
Ga0070739_104664791	3300005532	Surface Soil	TEKVMQIRQSVSDLTAFTLTLHKKTIPAHSILHDFRVGFGHEGLQPNNPEVASFRYDGEVHFNLAREIVGRTVIVSAA*
Ga0070734_100048632	3300005533	Surface Soil	MQIRQATKDLSVFTAGLKKRIIPAKSILHDFRVGPGHEGLAPHNPDVASFHYEGEIYFNIKHEILDQTVIVSAGSSPIPDAN*
Ga0070735_101719951	3300005534	Surface Soil	MQTRQSRSALTAYTLQLRMRTIPANAILHDFRIGPGHQGLAPHNSDVASFHFEGQVYFNVAHEIVGKTGILSTRVD*
Ga0070730_103375372	3300005537	Surface Soil	MQIRQATAELSVYTSKLKKRKIPANAILHDFRVGPGHEGLAPHNPDVASFHYEGEVYFNITHEILGRTVIVSAGSSPLSES*
Ga0068863_1010204122	3300005841	Switchgrass Rhizosphere	RQARAELTAYTLELKKATIPAHAVLHDFRMGLGHEGLAPHNPDVASFRYEGRVYFNVIYEIVGRTVIVNVA*
Ga0066795_100678272	3300005938	Soil	MQTRQTRAELTAYTLHLRKRTIPANAVLHDFRVGPGHEGLAQHNPDVASFHYEGEVYFNVACEIIGRTVVVNVA*
Ga0066794_100949711	3300005947	Soil	YTLHLRKRTIPANAVLHDFRVGPGHEGLAQHNPDVASFHYEGEVYFNVACEIIGRTVVVNVA*
Ga0075029_1000008385	3300006052	Watersheds	MQTRQARRELTAYTLDLSKRTIPANAVLHDFRIGPGHEGLASHNPDVASFHYEGEIHFNVVQEIIGRTVVVNVA*
Ga0075030_1002044033	3300006162	Watersheds	MQTRQAQAELLVFTRSLGTATIPAKSVLRDFRVGPGHEGLAPHNPDVASFHYDGQVYFNVAREIVGKTVIVHGGSSDNGAV*
Ga0079221_108340342	3300006804	Agricultural Soil	MQIRQAVKDLSVFGSNLKKRIIPARSILHDFRIGPGHEGLAPHNPDVVSFHYEGEIYFNVKHEIVDATVIVASGSSPIPDLS*
Ga0066793_101106073	3300009029	Prmafrost Soil	MQTRQTRAELTAYTLHLRKRTIPANAVLHDFRVGPGHEGLAQHNPDVASFHYEGEVYFNVGCEIIGRTVVVNVA*
Ga0116136_10073127	3300009547	Peatland	MQTRQAQADLTAYAMELKKRIIPANAILHDFQLGPGHEGLAQHNPDVVSFHYDGEVHFNVAHEIVGRTVAVKAA*
Ga0116122_11293213	3300009639	Peatland	MQTRQAQADLTAYAMELKKRIIPANAILHDFQLGPGHEGLAQHNPDVVSFHYDGEVHFNV
Ga0116223_100724283	3300009839	Peatlands Soil	MIGGRMQTRRARADLTAYTMDLRRRTIPTNAILHDFRSGPGHEGLAQHNPDVASFHYDGEVHFNLAHEIVGKTVIVQAA*
Ga0136449_1000164607	3300010379	Peatlands Soil	MQTRRARADLTAYTMDLRRRTIPTNAILHDFRSGPGHEGLAQHNPDVASFHYDGEVHFNLAHEIVGKTVIVQAA*
Ga0136449_1001823403	3300010379	Peatlands Soil	METRQARAYLTAYTMDLKKRTIPANAILHDFRVGPGHEGLASHNPDVVSFHYEGEVYCNIAHEIVGRTVVVNAA*
Ga0136449_1002023754	3300010379	Peatlands Soil	MQTRRAQADLTAYTTELNTRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA*
Ga0138559_10485862	3300011074	Peatlands Soil	DDFDWLFFSSHASTDHRDMIGGRMQTRRARADLTAYTMDLRRRTIPTNAILHDFRSGPGHEGLAQHNPDVASFHYDGEVHFNLAHEIVGKTVIVQAA*
Ga0138560_10610472	3300011083	Peatlands Soil	MQTRRARADLTAYTMDLRRRTIPTNAILHDFRSRPGHEGLAQHNPDVASFHYDGEVHFNLAHEIVGKTVIVQAA*
Ga0150983_124650042	3300011120	Forest Soil	MQTRQARTELTAYTLDLNKRTIPANAVLHDFRVGPGHEGLARHNPDVASFHYEGKVHFNVVDEIVGRTVVVSVA*
Ga0137378_118403481	3300012210	Vadose Zone Soil	VYTLDLKKRTIPTKAILHDFRVGLGHEGLAPYRLDVVSFHYEQQVYFNIDQEIVDKTVLVQSAD*
Ga0181533_11508512	3300014152	Bog	RLMAGLNGRAVGDRQMQTRRAQADLTAYTAELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA*
Ga0181527_10319603	3300014153	Bog	MQTRQARADLTAYTMDLKKRTIPANAILHDFRVGPGHEGLASHNPDVVSFHYEGEVYCNMAHEIVGRTVVVSTA*
Ga0181524_101256753	3300014155	Bog	MQTRRAQADLTAYTAELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA*
Ga0181517_103861251	3300014160	Bog	MMQTRQAQTNLAAFTLKLGKVMIPARAVLHDFRLGPGHEGLSPHNPDVVSFRYDGQVYFNIAEEIVEKTAIVMSA*
Ga0181517_105901671	3300014160	Bog	YASQQVPMQTRQAQTALTAYTLSLDRRTIPAHALLADFRIGPGHEGLARHNPNVASFHYQGEVHFNIAPEIVPRTVIVRAA*
Ga0181529_103408322	3300014161	Bog	MQTRQARADLMAYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA*
Ga0181538_101156762	3300014162	Bog	MQTRQARADLMAYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEIVGRTVAVKAA*
Ga0181528_100712102	3300014167	Bog	MQTRRAQADLTAYTTELNKRIIPANAILNDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA*
Ga0181535_100461206	3300014199	Bog	MQTRQARADLMAYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNV
Ga0181535_104524802	3300014199	Bog	MVYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA*
Ga0182014_101527201	3300014491	Bog	METRQARAELTAYTLDLHKRTIPADAILHDFRVGSGHEGLAEHNPNVASFHYEGEVYFNVVNEIVGRTEVLNARPQCGRGSSPSP*
Ga0182014_103781492	3300014491	Bog	MQTRQAQADLTAYTLELNKRIIPANAILHDFRLGPGHEGLAQHKPDVVSFHYDGEVYFNVAHEILGRTVAVKAA*
Ga0182013_100145185	3300014492	Bog	MQTRQAQTELIAYTKTLDKRTIPANALLHDFRIGPGHEGLAAHDPNVASFHYQDEIHFNVAHEIVARTVIVRAA*
Ga0182013_106300622	3300014492	Bog	MQTRRAQADLTAYATELNKRIIPVNAILHDFRLGPGHEELAQHNPDVVSFLYDGEVYFNVAHEILGRTVAVKAA*
Ga0182016_105621762	3300014493	Bog	MQTRLAESELTAYTLKLGKVTIPAKAVLHDFRRGPGHEGLSPHNPDVVSFHYDGQVYFNVVQEIS
Ga0182011_106314382	3300014496	Fen	MELKKRIIPANATLHDFRVGPGHEGLAEHNPEVVSFHYDGGVYFNVANEIVGKTVAVKAA
Ga0182024_115295551	3300014501	Permafrost	MQTRQAQSELTAFTLKLDKVTIPPRAVLQDFRMGPGHEGLAPHNPNVASFRYDGHVYFNIAKEIVEKTVIVMSTGSAATWAA*
Ga0182024_117570991	3300014501	Permafrost	MQTRQSQAELTAFTLKLGKVKIPAKAILHDFRQGPGHEGLAPHNPDVVSFHFDGEVYFNIAQEIVGRTVIVSTGSAANCAE*
Ga0182027_104365471	3300014839	Fen	METRQARAELTAYTLDLHKRTIPADAILHDFRVGPGHEGLAEHNPNVASFHYEGEVYFNVVNEIVASTVLPERCAPAAGRMRAEAQ*
Ga0181509_12277062	3300016701	Peatland	MQTRRAQADLTAYTAELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEIL
Ga0181515_14598542	3300016730	Peatland	MQTRRAQADLTAYTAELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGKVYFNVAAHEILGRTVAVKAA
Ga0187856_10054898	3300017925	Peatland	MQTRQAQADLTAYAMELKKRIIPANAILHDFQLGPGHEGLAQHNPDVVSFHYDGEVHFNVAHEIVGRTVAVKAA
Ga0187856_10404243	3300017925	Peatland	MQTRQARADLTAYTMDLKKRTIPANAILHDFRVGPGHEGLASHNPDVVSFHYEGEVYCNMAHEIVGRTVVVSTA
Ga0187879_103922552	3300017946	Peatland	MQTRQARADLTVYTMELKKRTIPANAILHDFRVGPGHEGLAPHNPDVVSFHYEGEVYFNIAHEIVGRTVVVSAA
Ga0187847_103973171	3300017948	Peatland	MVYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEIVGRTVAVKAA
Ga0181520_100321616	3300017988	Bog	MQTRRAQADLTAYTAELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0181520_100366946	3300017988	Bog	MQTRQARADLMAYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0181520_101574203	3300017988	Bog	MVYTMELKKRTIPANAILHDFRLGPGHEGLAQHNADVVSFHYDGEVYFNVAHEIVGRTVAVKAA
Ga0181520_105489762	3300017988	Bog	MQTRQAQTALTAYTLSLDRRTIPAHALLADFRIGPGHEGLARHNPNVASFHYQGEVHFNIAPEIVPRTVIVRAA
Ga0181520_105833472	3300017988	Bog	METRQARADLTAYTMELGRRIIPANAILHDFRVGPRHEGLAQHNPEVVSFHYDGELYFNIAHEVVNRTVVVKAA
Ga0187884_100778342	3300018009	Peatland	MQTRQARTELTAYTLNLNKRTIPANAILYDFRMGPGHEGLAGHNPNVASFHYEGELYFNVVHEIVGRTVVVNAA
Ga0187860_11162272	3300018014	Peatland	MQTRQAQADLTAYAMELKKRIIPANAILHDFQLGPGHEGLAQHNPDVVSFHYDGDVHVNVAHEIVGRTVAVKAA
Ga0187880_11434311	3300018016	Peatland	MQTRQARADLTAYTMDLKKRTIPANAILHDFRVGPGHEGLASHNPDVVSFHYEGEVYCNMAHEIVGRTVAVKAA
Ga0187872_100334855	3300018017	Peatland	AGGDELGTRQARLDLVAYTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVHFNVAHEIVGRTVAVKAA
Ga0187857_104485061	3300018026	Peatland	MQTRQARADLTVYTMELKKRTIPANAILHDFRVGPGHEGLAPHNPDVVSFHYEGEVYFNIAHEIVGRTVVVSTA
Ga0187863_101177422	3300018034	Peatland	MQTRQARAELTVYTMELEKVTIPPNAILHDFRVGPGHEGLAPFVTDVASFRYEGEVYFNMSHEIVGRTVIVNAA
Ga0187871_106538841	3300018042	Peatland	MVFTMELKKRTIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0187887_102702791	3300018043	Peatland	MQTRRAQADLTAYTTELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0187859_101346252	3300018047	Peatland	MQTRRARADLTAYTTELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEIVGRTVAVKAA
Ga0187859_104669741	3300018047	Peatland	MQTRQARADLTVYTMELKKRTIPANAILHDFRVGPGHEGLGRHNPNVVSFRYEGEVYFNVAHEVVGK
Ga0187858_105167672	3300018057	Peatland	MQTRQAQADLTAYAMELKKRIIPANAILHDFQLGPGHEGLAQHNPDVVSFHYDGEVHFNVAHEILGRTVAVKAA
Ga0181501_13817792	3300019230	Peatland	LKCRLMAGLNGRAVGDRQMQTRRAQADLTAYTAELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0181502_12012452	3300019242	Peatland	MQTRRAQADLTAYTAELNKRIIPANALLHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0181508_15701902	3300019256	Peatland	MQTRQAQADLTAFTLRLGKITIPAKAVLHDFRMGPGHEGLAPHNRDVASFHYDDQVYFNIAEEIVGKTAIVMSA
Ga0197907_114670142	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MQTRQAQVELTACTRGLNKATIPANAILHDFRLGPGHDGLAPHNPNVASFRYEGQVYFNVAHEIVGRTVILKAA
Ga0210389_112384762	3300021404	Soil	MQTRQARTDLTVYTRGLEKRTIPANAILHDFRVGPGHEGLAPFVTDVASFHYQGEVYFNMSREIVGRTVVVNAA
Ga0210409_109767231	3300021559	Soil	MQTRQARTELTAYTLDLSKRTIPVNAVLHDFRAGLGHEGLAGHNPDVVSFHYEGQIYFNVVHEIIGRTVIVNVA
Ga0224555_10364764	3300023088	Soil	METRQARAELTAYTLDLHKRTIPADAILHDFRVGPGHEGLAEHNPNVASFHYEGEVYFNVVNEIVASTVLPERCAPAAGRMRAEAQ
Ga0224555_10366271	3300023088	Soil	MQTRQAQADLTAYTLELNKRIIPANAILHDFRLGPGHEGLAQHKPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0224555_11569971	3300023088	Soil	METRQARAELTAYTLDLHKRTIPADAILHDFRVGSGHEGLAEHNPNVASFHYEGEVYFNVVNEIVGRTEVLNARPQCGRGSSPSP
Ga0209540_103770092	3300025888	Arctic Peat Soil	MQTRRAQADLTAYTTELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVHFNVAHEILGRTVAVKAA
Ga0209840_10583371	3300026223	Soil	MQTRQTRAELTAYTLHLRKRTIPANAVLHDFRVGPGHEGLAQHNPDVASFHYEGEVYFNVACEIIGRTVVVNVA
Ga0209648_100513373	3300026551	Grasslands Soil	MQTRQARAELTAYTLELKKRTIPAHAVLHDFRVGLGHEGLAPHNPDVASFRYEGRVYFNVIHEIVGRTVIVNVA
Ga0209648_104017832	3300026551	Grasslands Soil	MQTSQSTFALTAYTMGLQKRTIPANAVLHAFRMRPRHEGLGQHNPDVASFHFEGEVYFNVAHEIVGTTVIVSAGSVYP
Ga0209648_105138551	3300026551	Grasslands Soil	GQVFGWDVKRMQTSQSTFALTAYTMGLQKRTIPANAVLHDFRMRPRHEGLRQHNPDVASLHFEGEVYFNVGHEIVGTTVIVSAGSVYP
Ga0209581_1000134198	3300027706	Surface Soil	MQIRQATADLSVYTSKLKKRTIPAKAILHDFRVGPGHEGLAPHNPDVVSFHYEGEIYFNVSEEILGHTVIVSAGSTSPFSE
Ga0209060_1000189617	3300027826	Surface Soil	MQIRQATKDLSVFTAGLKKRIIPAKSILHDFRVGPGHEGLAPHNPDVASFHYEGEIYFNIKHEILDQTVIVSAGSSPIPDAN
Ga0209517_104538131	3300027854	Peatlands Soil	METRQARAYLTAYTMDLKKRTIPANAILHDFRVGPGHEGLASHNPDVVSFHYEGEVYCNIAHEIVGRTVVVNAA
Ga0209067_1000183419	3300027898	Watersheds	MQTRQARRELTAYTLDLSKRTIPANAVLHDFRIGPGHEGLASHNPDVASFHYEGEIHFNVVQEIIGRTVVVNVA
Ga0209698_108476571	3300027911	Watersheds	MQTRQSQTELTAFTLKLGKVTIPAKAILHDFRQGPGHEGLAPHNPDVASFHFDGEVYFYIAQEIVGRTVIVSAGSAANWAE
Ga0311339_103555471	3300029999	Palsa	MQTRQARANVTVYTMGLEKRTIPANAILHDFRVGPGHEGLAPFVNDVASFHYEGEVYFNMSHEIVGRTVVVTTA
Ga0311353_116710311	3300030399	Palsa	LRFKDSRAEQMQTRQARANVTVYTMGLEKRTIPANAILHDFRVGPGHEGLAPFVNDVASFHYEGEVYFNMSHEIVGRTVVVTTA
Ga0316363_103671211	3300030659	Peatlands Soil	MQTRRARADLTAYTMDLRRRTIPTNAILHDFRSGPGHEGLAQHNPDVASFHYDGEVHFNLAHEIVGKTVIVQAA
Ga0170834_1008171681	3300031057	Forest Soil	MQTRQARTDLTVYTMGLEKRTIPANAILHDFRVGPGHEGLAPFVSDVASFHYEGEVYFNMAREI
Ga0302324_1016581202	3300031236	Palsa	MQTRQARADLAVYTRDLKKRTIPAGAILHDFRVGPGHEGLAPYNTDVVSFHYEGEVYFNIVQEIAGRTVVVNAA
Ga0302320_100695424	3300031524	Bog	MQTRQAQTELTAYTKTLDKRTIPANALLHDFRIGPGHEGLAAHDPNVASFHYQDEIHFNVAHEIVARTVIVRAA
Ga0302320_103118454	3300031524	Bog	MQTRRAQADLTAYTAELNKRIVPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0311301_114627852	3300032160	Peatlands Soil	MQTRRAQADLTAYTTELNTRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0348332_130459522	3300032515	Plant Litter	MQTRQSQAELTAFTLKLGKVKIPAKAILHDFRQGPGHEGLAPHNPDVVSFHFDGEVYFNIAQEIIGRTVIVSTGSAANWAE
Ga0335079_100354874	3300032783	Soil	MQIRQATADFPAYTSNLKKRTIPAKAILHDFRTGPGHQGLAPHNPDVASFHYEGEIYFNITHEVLDRTVIVSAGGSSPLPDL
Ga0335078_100699796	3300032805	Soil	MQIRQATADLPAYTSRLKKRTIPARAILHDFRVGPGHEGLAPHNPDVVSFHYEGEIYFNVTEEILGNTVIVNVGSSPMSLAD
Ga0335081_108792692	3300032892	Soil	MQIRQTTAEIPVYTSKLKKRMIPANAILHDFRVGPGHEGLAPHSPDVASFHYDGEIYFNISNEVVGRTVIVSVGSSVPEI
Ga0335069_100677141	3300032893	Soil	MEMRQVRRAITVYDRNLEKHTIPEYAILRDFRIGPGHEGLAGHSPDVASFHYDGAVYFNMAHEIVRQTVIVQAA
Ga0335069_100677144	3300032893	Soil	METRQARREFTVFGLDLERRMIPENAILRDFRIGPGHEGLAGSNPEVASFHYEGAVYFNMAREIVHRTAIVRAAWPCLK
Ga0326728_106711251	3300033402	Peat Soil	MQTRQSQAELTAYTLKLNKVTIPAKAVLHDFRVGPGHEGLAPHNPGVASFHYDGQLYFNIAHEIVGRTVIVSTGSAVPRTT
Ga0326728_107574222	3300033402	Peat Soil	LKCRLMAGLNGRAVGDRQMQTRRAQADLTAYTTELNKRIIPANAILHDFRLGPGHEGLAQHNPDVVSFHYDGEVYFNVAHEILGRTVAVKAA
Ga0326727_107778291	3300033405	Peat Soil	MQTRQSQAELTAYTLNLGKVRIPAKAVLHDFRQGPGHEGLLPHSPDVVSFHYDGQLYFNIAQEIVGKTLIVNNGSAATWAA
Ga0310811_108105102	3300033475	Soil	MQTRQARADLTAFTMDLRRRTIPANAILHDFRTGPGHEGLLPNKPDIVSFHYDGELYFNMLHEIIDKTVIVNVSST
Ga0334790_020838_2288_2512	3300033887	Soil	MQTRQARVDLTAYTIDLKKWTIPANAILHDFRVGPGHEGLASHNPDVVSFHYEDEVYCNIAREIVGRTVVVNAA
Ga0334792_012586_2270_2476	3300033888	Soil	MQTRQAQTELTAYTLNLDKRTIPAKAVLHDFRVGPGHEGLAAHNPNVASFHFNVTDEIVARTAIVSAA
Ga0334792_058028_981_1178	3300033888	Soil	METRQARAELTAYTLDLNRRTIPADAILHDFRVGPGHEGLAGHSPDVASFHYEGEVYFNVVNEIVG
Ga0334792_094595_407_631	3300033888	Soil	MQTRQARADLTAYTLNLNKRTIPANAVLHDFRLGPGHEGLAQHNPDVVSFHYEGELYFNVAHEIVGRTVVVNAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083905

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences