Metagenome / Metatranscriptome Family F083903

Basic Information
Family ID	F083903
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	81 residues
Representative Sequence	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEW
Number of Associated Samples	104
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.04 %
% of genes near scaffold ends (potentially truncated)	93.75 %
% of genes from short scaffolds (< 2000 bps)	90.18 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Bacteria (84.821 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (34.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.15% β-sheet: 0.00% Coil/Unstructured: 51.85%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04299	FMN_bind_2	25.00
PF04261	Dyp_perox	11.61
PF00989	PAS	4.46
PF08240	ADH_N	4.46
PF00107	ADH_zinc_N	4.46
PF13426	PAS_9	2.68
PF00271	Helicase_C	2.68
PF08448	PAS_4	1.79
PF07690	MFS_1	1.79
PF04229	GrpB	0.89
PF13384	HTH_23	0.89
PF01425	Amidase	0.89
PF13419	HAD_2	0.89
PF00561	Abhydrolase_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	11.61
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.89
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.82 %
Unclassified	root	N/A	15.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.82 %
Unclassified	root	N/A	15.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.82 %
Unclassified	root	N/A	15.18 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.79 %
Unclassified	root	N/A	15.18 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.18 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	10.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.18 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.68 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.79 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.18 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	10.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.68 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.79 %
Saccharospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae	0.89 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.18 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	10.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.68 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.79 %
Sapientia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Sapientia	0.89 %
Salinibius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Salinibius	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.18 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	10.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.68 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.79 %
Salinibius halmophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Salinibius → Salinibius halmophilus	0.89 %
Sapientia aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Sapientia → Sapientia aquatica	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02FPTYC	Not Available	659	Open in IMG/M
3300000559\|F14TC_103526709	Not Available	526	Open in IMG/M
3300000956\|JGI10216J12902_114509907	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300004067\|Ga0055485_10045670	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300004067\|Ga0055485_10109507	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300004114\|Ga0062593_100331247	All Organisms → cellular organisms → Bacteria → FCB group	1318	Open in IMG/M
3300004114\|Ga0062593_103259303	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300004145\|Ga0055489_10029571	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300004779\|Ga0062380_10130822	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005288\|Ga0065714_10202273	Not Available	891	Open in IMG/M
3300005329\|Ga0070683_101913348	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300005340\|Ga0070689_101962717	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300005355\|Ga0070671_100073628	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300005364\|Ga0070673_101277054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	689	Open in IMG/M
3300005366\|Ga0070659_102032671	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300005434\|Ga0070709_10504026	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300005440\|Ga0070705_100934222	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300005451\|Ga0066681_10080662	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300005454\|Ga0066687_10621066	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005471\|Ga0070698_100311791	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005518\|Ga0070699_100927100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Sapientia → Sapientia aquatica	798	Open in IMG/M
3300005843\|Ga0068860_100473770	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005881\|Ga0075294_1032676	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300006804\|Ga0079221_11731059	Not Available	510	Open in IMG/M
3300006806\|Ga0079220_10609627	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006845\|Ga0075421_102803679	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006871\|Ga0075434_100213801	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300006880\|Ga0075429_100380015	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300006903\|Ga0075426_10242102	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300006969\|Ga0075419_10854680	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300009012\|Ga0066710_102281430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300009012\|Ga0066710_104490907	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009053\|Ga0105095_10135677	Not Available	1340	Open in IMG/M
3300009162\|Ga0075423_12160454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	604	Open in IMG/M
3300009167\|Ga0113563_13387411	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300009804\|Ga0105063_1035588	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300010375\|Ga0105239_10037062	All Organisms → cellular organisms → Bacteria → Proteobacteria	5349	Open in IMG/M
3300010397\|Ga0134124_12300572	Not Available	579	Open in IMG/M
3300011119\|Ga0105246_11328756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	667	Open in IMG/M
3300011412\|Ga0137424_1007175	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300011435\|Ga0137426_1006040	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300011435\|Ga0137426_1273392	Not Available	505	Open in IMG/M
3300011437\|Ga0137429_1003788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4598	Open in IMG/M
3300011445\|Ga0137427_10082429	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300012034\|Ga0137453_1120541	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012353\|Ga0137367_10517385	All Organisms → cellular organisms → Bacteria → Proteobacteria	840	Open in IMG/M
3300012360\|Ga0137375_11160619	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012509\|Ga0157334_1014860	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300012511\|Ga0157332_1041024	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300012893\|Ga0157284_10156094	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012951\|Ga0164300_10059154	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300012957\|Ga0164303_10013172	All Organisms → cellular organisms → Bacteria	2961	Open in IMG/M
3300012957\|Ga0164303_10135522	Not Available	1280	Open in IMG/M
3300013306\|Ga0163162_12278628	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300014154\|Ga0134075_10125361	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300014255\|Ga0075320_1047642	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300014297\|Ga0075306_1082013	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300014325\|Ga0163163_10492138	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300014326\|Ga0157380_10891059	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300014883\|Ga0180086_1097216	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300015241\|Ga0137418_10982557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300016341\|Ga0182035_11152370	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300016387\|Ga0182040_10408557	Not Available	1067	Open in IMG/M
3300016404\|Ga0182037_11406933	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300017927\|Ga0187824_10237017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300018053\|Ga0184626_10257183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300018054\|Ga0184621_10296922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300018056\|Ga0184623_10027004	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300018056\|Ga0184623_10384102	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300018063\|Ga0184637_10079374	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300018063\|Ga0184637_10488766	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300018075\|Ga0184632_10376527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300018082\|Ga0184639_10388267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300018422\|Ga0190265_13305571	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300018429\|Ga0190272_10277248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1281	Open in IMG/M
3300018466\|Ga0190268_11106676	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300019377\|Ga0190264_11885007	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300019885\|Ga0193747_1097247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300020018\|Ga0193721_1036422	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300022214\|Ga0224505_10162307	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300022534\|Ga0224452_1188437	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300025318\|Ga0209519_10108347	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300025916\|Ga0207663_10208153	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300025928\|Ga0207700_11703893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300025931\|Ga0207644_11129986	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300025932\|Ga0207690_10136196	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300025934\|Ga0207686_10746136	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300025944\|Ga0207661_11867665	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026046\|Ga0208780_1006077	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300026067\|Ga0207678_10962293	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300026116\|Ga0207674_11427862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	661	Open in IMG/M
3300027552\|Ga0209982_1039901	Not Available	748	Open in IMG/M
3300027637\|Ga0209818_1078863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	843	Open in IMG/M
3300027725\|Ga0209178_1225297	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300027876\|Ga0209974_10171870	Not Available	790	Open in IMG/M
3300027877\|Ga0209293_10516742	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300028814\|Ga0307302_10294275	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300031099\|Ga0308181_1122597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Salinibius → Salinibius halmophilus	584	Open in IMG/M
3300031229\|Ga0299913_11192784	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031573\|Ga0310915_10826549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300031719\|Ga0306917_10234935	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300031995\|Ga0307409_100601084	Not Available	1087	Open in IMG/M
3300032003\|Ga0310897_10353697	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300032075\|Ga0310890_11142017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300032179\|Ga0310889_10700646	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300032829\|Ga0335070_10389782	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300033412\|Ga0310810_10323039	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300034149\|Ga0364929_0059533	Not Available	1166	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.68%
Host-Associated	Host-Associated	21.43%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.36%
Aquatic	Environmental → Aquatic	22.32%
Plants	Host-Associated → Plants	21.43%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.18%
Sediment	Environmental → Aquatic → Sediment	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.36%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Marine	Environmental → Aquatic → Marine	3.57%
Floodplain	Environmental → Terrestrial → Floodplain	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.79%
Sediment	Environmental → Aquatic → Marine → Sediment	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.14%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.89%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005881	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014297	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026046	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_04482490	2170459017	Switchgrass, Maize And Mischanthus Litter	MGASGFLLLAAVLLAMAVGRVVFRAAPKGGIDWALEVAFVRLDFPPPCRDVAQQIAAGLAEVVGMRIKQLKPEHN
F14TC_1021534351	3300000559	Soil	MMTSVYIVLCVALLLVTFGRVVFRTAPKGIDWALEVAFIRLDFPPGQRLVAQQLAAGLAEIVGMKI
F14TC_1035267091	3300000559	Soil	MMTPIYIVLCVALLLVTFGRVVFRAAPKGIDWALEVAFIRLDFPPGQRLVAQQLAAGLAEIVGMKI
JGI10216J12902_1145099071	3300000956	Soil	MNATIYLVLAVILLLMTFGRGIVRSRPKGVDWELEVAFIRLDFPPEHRVVAQQIAAGLAEIVGMKIKQLKPQ
Ga0055485_100456702	3300004067	Natural And Restored Wetlands	MASPIYLLLGAILILATVGRVVFRKESAGTDWGLEAAFIRLDFPPEQRAVAQQIAAGLAEVVGMKIKQLTPDHNLAQIADWADDR
Ga0055485_101095072	3300004067	Natural And Restored Wetlands	MLYPVYLLLGGILLLVTLGRVVVRGGAKGTDWALETAFIRLDFPPEHRALAQQLAAGLAEVVGMKIKQLTPDHNLAQIADWADD
Ga0062593_1003312472	3300004114	Soil	MMPAPLYLLIAVILLLATFGRVVFRAAPKGVDWALEVAFIRLEFPPEQRVVAQQLAAGLAEIVGMKIKQLKPEHNLTEIAGWAEDGIYAKDLITLFLVAFNVRCD*
Ga0062593_1032593031	3300004114	Soil	MASPIYLLLGAILLLATVGRVVFRKDSGGTDWALETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDHNLAQIADWADNRIFAKDLITLFVVAF
Ga0055489_100295711	3300004145	Natural And Restored Wetlands	MASPIYLLLGAILILATVGRVVFRKESAGTDWGLEAAFIRLDFPPEQRAVAQQIAAGLAEVVGMKIKRLTPDHNLAQIADW
Ga0062380_101308221	3300004779	Wetland Sediment	MISPIYLLLGAILLLVTLGRVVFRNEARGTDWALETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDH
Ga0065714_102022731	3300005288	Miscanthus Rhizosphere	MAPVYILLCAVILLMTLGRVVWRPASRGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQI
Ga0070683_1019133482	3300005329	Corn Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLFV
Ga0070689_1019627171	3300005340	Switchgrass Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLFVVA
Ga0070671_1000736284	3300005355	Switchgrass Rhizosphere	MAPVYILLCAVILLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQIAEWADDGIYAKDLITLFVVAFNV
Ga0070673_1012770542	3300005364	Switchgrass Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHN
Ga0070659_1020326712	3300005366	Corn Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWAD
Ga0070709_105040263	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDG
Ga0070705_1009342222	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLFVV
Ga0066681_100806621	3300005451	Soil	MSMAPIYLLIGAVLLLMTLGRMVFRSAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLRPEHTLSQIAEWADNDIYAKDLITLFVVAFSVRCDP
Ga0066687_106210661	3300005454	Soil	MITSVYILVAAIMVLMTLGRVVFRPAPKGIDWALEVAFIRLEFPPDQRVVAQQLAAGLAEIVGMKIKQLTPENNLS
Ga0070698_1003117911	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQIYLMLALIVVLMTVGRVIWRPLPKNVDWALEVAFIRLDFPPEQREVAQQLAAGLAEIVGTKIKQLKPEHNLSQIAEW
Ga0070699_1009271002	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNASIYFVLAVILLLMTFGRVLVRPGPKGIDWALEVAFIRLDFPPEYRDVAHQIAAGLAEIVGMKIKQLKPEHNLTQIAEWADN
Ga0068860_1004737703	3300005843	Switchgrass Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDL
Ga0075294_10326761	3300005881	Rice Paddy Soil	MPAPLYLLIAVILLLATFGRVVFRAAPKGVDWALEVAFIRLEFPPEQRVVAQQLAAGLAEIVGMKIKQLKPEHNLTEIAG
Ga0079221_117310592	3300006804	Agricultural Soil	MIHPAYLVLAAILLLLTLGRVVVRSAPKGIDWALEVAFIRLEFPPPQRVVAQQLAAGLAEIVGMKIKQLTPENNLSQIAEWADNQIYAKDLITLFVVAFSVKCDA
Ga0079220_106096272	3300006806	Agricultural Soil	MIHPAYLVLAAILLLLTLGRVVVRSAPKGIDWALEVAFIRLEFPPPQRVVAQQLAAGLAEIVGMKIKQLTPENNLSQIAEWADNQIYAKDLITLFVVAF
Ga0075421_1028036792	3300006845	Populus Rhizosphere	MNASIYFVLAVILLLMTFGRGIVRSGPRGVDWALEVAFIRLDFPPEQRDVAQQIAAGLAEIVGMKIKQLKPQHNLSQIAEW
Ga0075434_1002138013	3300006871	Populus Rhizosphere	MAPVYILLCAVILLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQIAEWADDGIYAKDLITLFVVAF
Ga0075429_1003800151	3300006880	Populus Rhizosphere	MATPITLLLALVLLLITFGRVIRRPLPKGVDWALEVAFIRLDFPPEQRGMAQQLAAGLAEIVGMKIKQLRPEHNL
Ga0075426_102421023	3300006903	Populus Rhizosphere	MAPVYILLCAVVLLMTLGRVVWRPASRGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKP
Ga0075419_108546801	3300006969	Populus Rhizosphere	MAAPAYILLALVLLLLTFGRVIFRSAPRGIDWALEVAFIRLDFPPEQRVVAQQLAAGLAEIVGMKIKQ
Ga0066710_1022814301	3300009012	Grasslands Soil	MSMAPIYLLIGAVLLLMTLGRMVFRSAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLRPEHTLSQIAEWA
Ga0066710_1044909071	3300009012	Grasslands Soil	MMAPVYIVLCVVLLLMTFGRVVFRAAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLRPEHTLSQIAEWA
Ga0105095_101356773	3300009053	Freshwater Sediment	MLSPVYLLLGGILLLVTLGRVVVRGGAKGTDWALETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDHNLAQIADWADDRIYAKDL
Ga0075423_121604541	3300009162	Populus Rhizosphere	MPALYLLIAVILLLATFGRIVFRPPKGVDWALEVAFIRLEFPPEQRVVAQQLAAGLAEIVGMKIKQLKPDHNLTEIAGWAEDEIYAKDLITLFLV
Ga0113563_133874112	3300009167	Freshwater Wetlands	MISPVYLVLGGILLLVTLGRVVVRGGAKGTDWALETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIKQLTP
Ga0105063_10355882	3300009804	Groundwater Sand	MFDTIQITLLLVLFLVLMTFGRVIWRPLPKGIDWALEVAFIRLDFPPEQRGVAQQLAAGLAEIVGI
Ga0134088_102688182	3300010304	Grasslands Soil	MTFGRVIRRPLPKGVDWALEVAFIRLDFPPEQRGMAQQLAAGLAEIVGMKIKQLRPEHNL
Ga0105239_100370626	3300010375	Corn Rhizosphere	MAPVYILLCAIVLLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIK
Ga0134124_123005722	3300010397	Terrestrial Soil	MAPVYILLCAIVLLMTLGRVVWRPASKGIDWALEVAFIRLDSPPAQRIIAQQLAAGLAEIVGMKIKPLKPEHN*
Ga0105246_113287561	3300011119	Miscanthus Rhizosphere	MGAPVFLLLAAVLLAMTVRRVVVRPMPKGIDWALEVAFVRLDFSPPYRDVAQQIAAGLAE
Ga0137424_10071751	3300011412	Soil	MNASIYLVLAVILLLMTFGRGIVRSKPKGVDWELEVAFIRLDFPPEHRVVAQQIAAGLAEIVGMKIKQLKPQHNLSQIAE
Ga0137426_10060404	3300011435	Soil	MNAPIFLLLALILLLMTFGRMIFRGGPKGTDWALEVAFIRLEFPPEHRDLAQQIAAGLAEIVGLKI
Ga0137426_12733922	3300011435	Soil	MNAPIFLLLALILLLMTFGRVIFRGEPKGTDWALEVAFIRLEFPPEHRDLAQQIAAGLAEIVGLKI
Ga0137429_10037881	3300011437	Soil	MNAPIFLLLALILLLMTFGRMIFRGGPKGTDWALEVAFIRLEFPPEHRDLAQQIAAGLAEIVGLKIKQLKPEHNLSQIAAWSENGIYARDLITLFLVAFDVR
Ga0137427_100824292	3300011445	Soil	MNASIYLVLAVILLLMTFGRGIVRSKPKGVDWELEVAFIRLDFPPEHRVVAQQIAAGLAEIVGMKIKQLKPQHNLSQIAEW
Ga0137453_11205412	3300012034	Soil	MLSPVYLLLGGILLLVTLGRVVVRGGAKGTDWELETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDHNLAQIAAW
Ga0137380_106053502	3300012206	Vadose Zone Soil	MTFGRVIRRPLPKGVDWALEVAFIRLDFPPEQRGMAQQLAAGLAEIVGMK
Ga0137367_105173851	3300012353	Vadose Zone Soil	MTFGWVIWRPLPKGVDWALEVAFIRLDFPPEQRGVAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWAENE
Ga0137375_111606191	3300012360	Vadose Zone Soil	MATPITLLLALVLLLMTFGRVIWRPLSKGVDWALEVAFIRLDFPPEQRGVAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWAENE
Ga0157334_10148601	3300012509	Soil	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLF
Ga0157332_10410242	3300012511	Soil	MTLGRVVLRPVSKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNL
Ga0157284_101560942	3300012893	Soil	MAPVYILLCAIVLLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQIAEWADDG
Ga0164300_100591542	3300012951	Soil	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQI
Ga0164303_100131724	3300012957	Soil	GFGSSTMAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLFVVAFHVT*
Ga0164303_101355221	3300012957	Soil	MMTPIYIVLCVALLLVTFGRVVFRAAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWS
Ga0163162_122786281	3300013306	Switchgrass Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEW
Ga0134075_101253611	3300014154	Grasslands Soil	MTFGRVIRRPLPKGVDWALEVAFIRLDFPPEQRGMAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWAENEIYAKDL
Ga0075320_10476421	3300014255	Natural And Restored Wetlands	MAPVYLLLAVIFLVMTCGRVIFRSRPKGVDWALEVAFIRLDFPPEQRVIAQQLAAGLAEVVGMRIKQLRPEHNLSQIADWAEDKIYAKDLITLFV
Ga0075306_10820132	3300014297	Natural And Restored Wetlands	MVSPIYWLLGAILLLASVGRVVFRNESRATDWALETAFIRLDFPPEYRAVAQQLAAGLAEVVGMNIKQLTP
Ga0163163_104921383	3300014325	Switchgrass Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADD
Ga0157380_108910591	3300014326	Switchgrass Rhizosphere	MFAPIYLLLGAILLLMTVGRVVFRQQPGGIDWALETAFIRLEFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDHNLAQIADWADDRIYAKDLITLFVVAF
Ga0180086_10972161	3300014883	Soil	MLSPVYLLLGGILLLVTLGRVVVRGGGRGTDWALETAFIRLDFPPEHRAVAQQLATGLAEVVGMKIKQ
Ga0137418_109825572	3300015241	Vadose Zone Soil	MSMTPIYLLIGAVLLLMTLGRMVFRSAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLRPEHTLSQIAEWADNDIYAKDLI
Ga0182035_111523702	3300016341	Soil	MAPLYILLCAILLLVTLGRVVVRPAPKGVDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLKPEHNLTQIAEWADDGIYAKDLITLFVVAFNVKC
Ga0182040_104085571	3300016387	Soil	MAPLYILLCAILLLVTLGRVVVRPAPKGVDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLKP
Ga0182037_114069332	3300016404	Soil	MAPLYILLCAILLLVTLGRVVLLPAPKGVDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLKPEHNLT
Ga0187824_102370171	3300017927	Freshwater Sediment	MVSPFYLVIIGVLLCMTFGRVIFRPAPKGIDWALEVAFIRLEFPPEERLVAQQLAAGLAEIVGMKIKQLKPEHNLSQ
Ga0184626_102571832	3300018053	Groundwater Sediment	MTAPIYLLLAVILLLMTFGRLNFRSGPKGIDWALEVAFIRLDFPPEQRDVAQQIAAGLAEIVGMKIK
Ga0184621_102969221	3300018054	Groundwater Sediment	MNAPIYLVLAVILLVMTFGRVIVRSGPRGIDWALEVAFIRLDFPPEHRDVAQQIAAGLAEIVGMKIKQLKPQHNL
Ga0184623_100270045	3300018056	Groundwater Sediment	MARQIYLMLALILVLMTVGRVIWRPSPKNVDWALEVAFIRLDFPPEQRGVAQQLAAGLAEIVGTKIKQLKPEHNLSQIAEWAENGIY
Ga0184623_103841022	3300018056	Groundwater Sediment	MSMAAQIYLMLALILLLMTVGRVIWRPLTKNVDWALEVAFIRLDFPPEQRGVAQQLAAGLAEIVGT
Ga0184637_100793741	3300018063	Groundwater Sediment	MNAPIFLLLAVILLLMTFGRVIFRSGPKGIDWALEVAFIRLEFPPEHRDVAQQIAAGLAEIVGMKIKQLKPEHNLSQIAEWAENG
Ga0184637_104887661	3300018063	Groundwater Sediment	MTVGRVIWRPLPKGVDWALEVTFIRLDFPPEQRGVAQQLAAGLAEIVGTKIKQLKPQHNLSQIAEWAENGIYAKDL
Ga0184632_103765272	3300018075	Groundwater Sediment	MTAPIYLLLAVILLLMTFGRLIFRSGPKGIDWALEVAFIRLDFPPEQRDVAQRIAAGLAEIVGMKIK
Ga0184639_103882671	3300018082	Groundwater Sediment	MTVGRVIWRPLPKGVDWALEVIFIRLDFPPEQRGVAQQLAAGLAEIVGTKIKQLKPQHNLSQI
Ga0190265_133055711	3300018422	Soil	MTPAYLLLAVILLLLTCGRFVFRSAPRGIDWALEVAFIRLDFPPEQRVVAQQLAAGLAEIVGMKIKQLKPEHNLTEIAGWAQDGVYAKDLITLFAVA
Ga0190272_102772483	3300018429	Soil	MLTPIYLILGGILLLATLGRVVVRGGAKGTDWALETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDHNLTQIADWADD
Ga0190268_111066762	3300018466	Soil	MLSAVFLVLSGILILVSLRRRVVVRRRAKGTDWALETAFIRLDFPPAHRAVAQQLAAGLAEIVGMKIKQLTPDHNLAQIAEWADDRIFAKDLITLFVVAF
Ga0190264_118850071	3300019377	Soil	MFSAVYLILGGILLLFSLGRVVVRGRAKGIDWALETAFIRLDFPPAHRAVAQQLAAGLAEIVGMKIKQLTPDHTLAQIADWADDRIHAKDLITLFVVAF
Ga0193747_10972471	3300019885	Soil	MSMAPIYLLIGAVLLLMTLGRMVFRSAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLRPEHTLSQIAEWADNDIYAKAM
Ga0193721_10364223	3300020018	Soil	MSMAPIYLLIGAVLLLMTLGRMVFRSAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLGRQ
Ga0224505_101623072	3300022214	Sediment	MSNPIYLLLGAILLLVTLGRVVVRRDEKGTDWALETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIK
Ga0224452_11884372	3300022534	Groundwater Sediment	MAAQITLLVTVILLVMTFVRLRWRPLPKGVDWALEVAFIRLEFPPDQRGVAQQLAAGLAEIVGMKIKQLRPEHSLNQIAEWAENEIYAKDLITLFVVAFSVR
Ga0209519_101083474	3300025318	Soil	MAPVYLLLAVILLVMTCGRMIFRSTPKGVDWALEVAFIRLEFPPDQRDIAQQLAAGLAEVVGIKIKQLKPEHNLSQI
Ga0207663_102081531	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MMTPVYIVLCVALLLVTFGRVVFRAAPKGIDWALEVAFIRLDFPPAQRLVAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADNGVYAKDLITLFVV
Ga0207700_117038931	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLR
Ga0207644_111299861	3300025931	Switchgrass Rhizosphere	MAPVYILLCAVILLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNL
Ga0207690_101361963	3300025932	Corn Rhizosphere	MAPVYILLCAIVLLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQIAEWADDGIYAKDLITLFVVAFNV
Ga0207686_107461361	3300025934	Miscanthus Rhizosphere	MAPVYILLCAVILLMTLGRVVWRPASRGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQIAEWADDGIYAKDLITLFVVAF
Ga0207661_118676652	3300025944	Corn Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLFVVAF
Ga0208780_10060772	3300026046	Natural And Restored Wetlands	MAPVYLLLAVIFLVMTCGRVIFRSRPKGVDWALEVAFIRLDFPPEQRVIAQQLAAGLAEVVGMRIKQLRPEHNLSQIADWAEDKIY
Ga0207678_109622931	3300026067	Corn Rhizosphere	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLI
Ga0207674_114278621	3300026116	Corn Rhizosphere	MGAPVFLLLAAVLLAMTVRRVVVRPMPKGIDWALEVAFVRLDFSPPYRDVAQQIAAGLAEIVGIHIKQLKPEHNLSQIAEWAENGIYAKDLITLFVVAFDV
Ga0209982_10399011	3300027552	Arabidopsis Thaliana Rhizosphere	MMPAPLYLLIAVILLLATLGRIVFRAAPKGVDWALEVAFIRLEFPPQQRVVAQQLAAGLAEIVGMKIKQLKP
Ga0209818_10788631	3300027637	Agricultural Soil	MVPVYLLLAVLLLLLTFGRVVFRSAPRGIDWALEVAFIRLDFPPEQRVVAQQLAAGLAEIVGMKIKQLKPEHNLTEIAGWAQDGIYAKDLIALFVVAFD
Ga0209178_12252972	3300027725	Agricultural Soil	MAPVYILLCAVFLLMTLGRVVVRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQIAEWADDGIYAKDL
Ga0209974_101718701	3300027876	Arabidopsis Thaliana Rhizosphere	MAPVYILLCAVILLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHN
Ga0209293_105167421	3300027877	Wetland	MASPIYLLLGAILLLVTVGRVVFRNESGGTDWALETAFIRLDFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDHNLAQI
Ga0307302_102942751	3300028814	Soil	MAAQITLLVTVILLVMTFVRLRWRPLPKGVDWALEVAFIRLEFPPDQRGVAQQLAAGLAEIVGMKIKQLR
Ga0307278_104382461	3300028878	Soil	MVILLLMTFGRILWRPLPKGVDWALEVAFIRLEFPPEQRGVAQQLAAGLAEIVGM
Ga0308181_11225972	3300031099	Soil	MGAPVFLLLAAVLLAMTVRRIVVRPMPKGIDWALEVAFVRLDFSPPYRDVAQQIAAGLAEIVGIRIKQLKPEHNLSQIAEWAE
Ga0299913_111927842	3300031229	Soil	MMPVYLFFAIFLLLIVGGAIILRPTPKGIDWELEVAFIRLEFPPDQRIVAQQLAAGIAEIVGMKIKQ
Ga0310915_108265491	3300031573	Soil	MAPLYILLCAILLLVTLGRVVVRSAPKGVDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLKPEHNLT
Ga0306917_102349351	3300031719	Soil	MAPLYILLCAILLLVTLGRVVVRPAPKGVDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLKPEHNLTQI
Ga0307409_1006010841	3300031995	Rhizosphere	MFAPIYLLLGAILLLMTVGRVVFRQQPGGIDWALETAFIRLEFPPEHRAVAQQLAAGLAEVVGMKIKQLTPDHNLAQIA
Ga0310897_103536973	3300032003	Soil	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVVAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLFVVA
Ga0310890_111420171	3300032075	Soil	MNASIYLVLAVILLLMTFGRGIVRSKPKGVDWELEVAFIRLDFPPEHRVVAQQIAAGLAEIVGMKIKQLKPQHNLSQIAEWAE
Ga0310889_107006461	3300032179	Soil	MAPVYILLCAVFLLMTLGRVVLRPASKGIDWALEVAFIRLDFPPAQRVIAQQLAAGLAEIVGMKIKQLRPEHNLSQIAEWADDGIYAKDLITLFVVAFH
Ga0335070_103897822	3300032829	Soil	MNGSVYLLLAGILLALTVGRVVFRPAPKGIDWALEVAFVRLDFPPPYRDVAQQIAAGLAEIVGMRIKQLKPEHNLGQIAEWADNGIYAR
Ga0310810_103230391	3300033412	Soil	MAPVYILLCAIVLLMTLGRVVWRPASKGIDWALEVAFIRLDFPPAQRIIAQQLAAGLAEIVGMKIKQLKPEHNLSQIAEWADDGIYAKDLIT
Ga0364929_0059533_968_1165	3300034149	Sediment	MGAPVFLLLAAVLLAMTVRRVVFRPTPKGIDWALEVAFVRLDFSPPYRDIAQQIAAGLAEIVGIRI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083903

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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