Metagenome / Metatranscriptome Family F083895

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083895
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	75 residues
Representative Sequence	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	41.96 %
% of genes from short scaffolds (< 2000 bps)	78.57 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.786 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (51.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.393 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.49% β-sheet: 0.00% Coil/Unstructured: 40.51%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF16177	ACAS_N	59.82
PF01116	F_bP_aldolase	13.39
PF00501	AMP-binding	6.25
PF10576	EndIII_4Fe-2S	4.46
PF00578	AhpC-TSA	2.68
PF14588	YjgF_endoribonc	1.79
PF13193	AMP-binding_C	1.79
PF13545	HTH_Crp_2	0.89
PF02844	GARS_N	0.89
PF11958	DUF3472	0.89
PF00709	Adenylsucc_synt	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	13.39
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.89
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.89 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.89 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.07 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	26.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinobacteria bacterium BACL2 MAG-120920-bin34	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	20.54 %
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	0.89 %
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinobacteria bacterium BACL2 MAG-120920-bin34	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	20.54 %
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	0.89 %
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinobacteria bacterium BACL2 MAG-120920-bin34	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	20.54 %
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Sporichthya polymorpha	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	0.89 %
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000268\|M3P_10050461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300000756\|JGI12421J11937_10014159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3021	Open in IMG/M
3300002447\|JGI24768J34885_10040769	Not Available	1544	Open in IMG/M
3300003277\|JGI25908J49247_10007930	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300003394\|JGI25907J50239_1079467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300003395\|JGI25917J50250_1032840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1142	Open in IMG/M
3300003413\|JGI25922J50271_10106622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	593	Open in IMG/M
3300003429\|JGI25914J50564_10006159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3936	Open in IMG/M
3300003431\|JGI25913J50563_1014115	Not Available	1349	Open in IMG/M
3300003490\|JGI25926J51410_1051300	Not Available	713	Open in IMG/M
3300005517\|Ga0070374_10521384	Not Available	592	Open in IMG/M
3300005581\|Ga0049081_10020803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2490	Open in IMG/M
3300005582\|Ga0049080_10029272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1922	Open in IMG/M
3300005584\|Ga0049082_10254377	Not Available	593	Open in IMG/M
3300006805\|Ga0075464_10079455	Not Available	1860	Open in IMG/M
3300006863\|Ga0075459_1043384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300007547\|Ga0102875_1223475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	579	Open in IMG/M
3300007548\|Ga0102877_1162696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	630	Open in IMG/M
3300007550\|Ga0102880_1103899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	746	Open in IMG/M
3300007590\|Ga0102917_1136347	Not Available	863	Open in IMG/M
3300007593\|Ga0102918_1047603	Not Available	1230	Open in IMG/M
3300007597\|Ga0102919_1100529	Not Available	910	Open in IMG/M
3300007606\|Ga0102923_1132583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300007617\|Ga0102897_1118696	Not Available	813	Open in IMG/M
3300007621\|Ga0102872_1128582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300007624\|Ga0102878_1030695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1678	Open in IMG/M
3300007632\|Ga0102894_1035906	Not Available	1283	Open in IMG/M
3300007634\|Ga0102901_1178945	Not Available	599	Open in IMG/M
3300007634\|Ga0102901_1219582	Not Available	534	Open in IMG/M
3300007637\|Ga0102906_1052941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1167	Open in IMG/M
3300007644\|Ga0102902_1178525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	628	Open in IMG/M
3300007644\|Ga0102902_1220135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	559	Open in IMG/M
3300007862\|Ga0105737_1190699	Not Available	540	Open in IMG/M
3300007992\|Ga0105748_10425592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	575	Open in IMG/M
3300008052\|Ga0102893_1233124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	525	Open in IMG/M
3300008119\|Ga0114354_1092938	Not Available	1208	Open in IMG/M
3300008119\|Ga0114354_1161682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1292	Open in IMG/M
3300008261\|Ga0114336_1031931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5098	Open in IMG/M
3300008962\|Ga0104242_1000838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	6352	Open in IMG/M
3300009026\|Ga0102829_1095399	Not Available	924	Open in IMG/M
3300009051\|Ga0102864_1180130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300009068\|Ga0114973_10495053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	633	Open in IMG/M
3300009152\|Ga0114980_10017854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4458	Open in IMG/M
3300009152\|Ga0114980_10156621	Not Available	1350	Open in IMG/M
3300009152\|Ga0114980_10225272	Not Available	1099	Open in IMG/M
3300009152\|Ga0114980_10798560	Not Available	525	Open in IMG/M
3300009160\|Ga0114981_10097289	Not Available	1633	Open in IMG/M
3300009163\|Ga0114970_10241571	Not Available	1047	Open in IMG/M
3300009163\|Ga0114970_10358983	Not Available	818	Open in IMG/M
3300009164\|Ga0114975_10015685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4647	Open in IMG/M
3300009164\|Ga0114975_10027446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	3423	Open in IMG/M
3300009181\|Ga0114969_10197722	Not Available	1236	Open in IMG/M
3300009185\|Ga0114971_10647048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	581	Open in IMG/M
3300010230\|Ga0136236_1024575	Not Available	768	Open in IMG/M
3300010312\|Ga0102883_1163007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	636	Open in IMG/M
3300011010\|Ga0139557_1000938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6878	Open in IMG/M
3300011268\|Ga0151620_1202787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	599	Open in IMG/M
3300012000\|Ga0119951_1004927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	6503	Open in IMG/M
3300012006\|Ga0119955_1045705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1384	Open in IMG/M
3300012665\|Ga0157210_1045994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300013005\|Ga0164292_10290226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1123	Open in IMG/M
3300018790\|Ga0187842_1191183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300019093\|Ga0187843_10221556	Not Available	794	Open in IMG/M
3300019093\|Ga0187843_10348361	Not Available	601	Open in IMG/M
3300020141\|Ga0211732_1146884	Not Available	1100	Open in IMG/M
3300020151\|Ga0211736_10351227	Not Available	880	Open in IMG/M
3300020172\|Ga0211729_10446130	Not Available	1454	Open in IMG/M
3300021325\|Ga0210301_1316747	Not Available	790	Open in IMG/M
3300021963\|Ga0222712_10022148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	5247	Open in IMG/M
3300022752\|Ga0214917_10055555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2629	Open in IMG/M
3300022752\|Ga0214917_10155111	Not Available	1203	Open in IMG/M
3300023174\|Ga0214921_10064363	Not Available	3062	Open in IMG/M
3300024343\|Ga0244777_10211809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300024348\|Ga0244776_10056044	Not Available	3058	Open in IMG/M
3300025635\|Ga0208147_1083401	Not Available	787	Open in IMG/M
3300027125\|Ga0255106_1018034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1048	Open in IMG/M
3300027139\|Ga0255082_1052690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	636	Open in IMG/M
3300027147\|Ga0255113_1066071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	669	Open in IMG/M
3300027148\|Ga0255115_1025312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300027212\|Ga0208554_1059499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	598	Open in IMG/M
3300027222\|Ga0208024_1052099	Not Available	761	Open in IMG/M
3300027263\|Ga0208446_1095226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300027367\|Ga0208801_1021429	Not Available	1052	Open in IMG/M
3300027368\|Ga0255133_1023525	Not Available	1368	Open in IMG/M
3300027375\|Ga0255137_1004990	Not Available	3723	Open in IMG/M
3300027468\|Ga0209247_1056722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	571	Open in IMG/M
3300027488\|Ga0255084_1060137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	670	Open in IMG/M
3300027531\|Ga0208682_1035441	Not Available	1322	Open in IMG/M
3300027538\|Ga0255085_1111928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	560	Open in IMG/M
3300027563\|Ga0209552_1016707	Not Available	2221	Open in IMG/M
3300027581\|Ga0209651_1046017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300027596\|Ga0255119_1029977	Not Available	1108	Open in IMG/M
3300027656\|Ga0209357_1047603	Not Available	1357	Open in IMG/M
3300027689\|Ga0209551_1018626	Not Available	2362	Open in IMG/M
3300027734\|Ga0209087_1007606	Not Available	5695	Open in IMG/M
3300027754\|Ga0209596_1323951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	604	Open in IMG/M
3300027759\|Ga0209296_1052791	Not Available	2111	Open in IMG/M
3300027760\|Ga0209598_10312280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	611	Open in IMG/M
3300027763\|Ga0209088_10084261	Not Available	1483	Open in IMG/M
3300027763\|Ga0209088_10111577	Not Available	1243	Open in IMG/M
3300027764\|Ga0209134_10029927	Not Available	1759	Open in IMG/M
3300027782\|Ga0209500_10059259	Not Available	2012	Open in IMG/M
3300027892\|Ga0209550_10133616	Not Available	1795	Open in IMG/M
3300027969\|Ga0209191_1016605	Not Available	3736	Open in IMG/M
3300027973\|Ga0209298_10079434	Not Available	1463	Open in IMG/M
3300028394\|Ga0304730_1100155	Not Available	1259	Open in IMG/M
3300031786\|Ga0315908_11373366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	554	Open in IMG/M
3300032092\|Ga0315905_10028069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	5713	Open in IMG/M
3300032092\|Ga0315905_10284781	Not Available	1591	Open in IMG/M
3300032092\|Ga0315905_11444591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	543	Open in IMG/M
3300034050\|Ga0335023_0003779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9055	Open in IMG/M
3300034066\|Ga0335019_0329379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	951	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	69.64%
Marine	Environmental → Aquatic → Marine	30.36%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	35.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	25.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	17.86%
River	Environmental → Aquatic → Freshwater → River	8.04%
Coastal	Environmental → Aquatic → Marine → Coastal	4.46%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.57%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.71%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	25.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	16.96%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.57%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	25.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	19.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.39%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.04%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	8.04%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.36%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.57%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.68%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.68%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.68%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.79%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.79%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000268	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters ver2	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006863	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007632	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007637	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300010230	Filterable freshwater microbial communities from Conwy River, North Wales, UK. Not filtered control. After WGA	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300021325	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1033 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027125	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8h	Environmental	Open in IMG/M
3300027139	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h	Environmental	Open in IMG/M
3300027147	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027148	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepB_8h	Environmental	Open in IMG/M
3300027212	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)	Environmental	Open in IMG/M
3300027222	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02 (SPAdes)	Environmental	Open in IMG/M
3300027263	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3 (SPAdes)	Environmental	Open in IMG/M
3300027367	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 (SPAdes)	Environmental	Open in IMG/M
3300027368	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepB_8d	Environmental	Open in IMG/M
3300027375	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8d	Environmental	Open in IMG/M
3300027468	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027488	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8d	Environmental	Open in IMG/M
3300027531	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02 (SPAdes)	Environmental	Open in IMG/M
3300027538	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8d	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027596	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8h	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
M3P_100504612	3300000268	Lotic	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPLFGASSSQLILQKSITAVSVDNNA*
JGI12421J11937_100141593	3300000756	Freshwater And Sediment	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
JGI24768J34885_100407691	3300002447	Freshwater And Sediment	HMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
JGI25908J49247_100079302	3300003277	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
JGI25907J50239_10794671	3300003394	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
JGI25917J50250_10328402	3300003395	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
JGI25922J50271_101066222	3300003413	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL*
JGI25914J50564_100061595	3300003429	Freshwater Lake	AQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
JGI25913J50563_10141151	3300003431	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLILKKSTTALAVDNNG*
JGI25926J51410_10513002	3300003490	Freshwater Lake	QKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0070374_105213842	3300005517	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL*
Ga0049081_100208031	3300005581	Freshwater Lentic	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0049080_100292722	3300005582	Freshwater Lentic	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0049082_102543771	3300005584	Freshwater Lentic	HMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0075464_100794552	3300006805	Aqueous	MAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL*
Ga0075459_10433842	3300006863	Aqueous	MAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0102875_12234752	3300007547	Estuarine	LFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0102877_11626961	3300007548	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
Ga0102880_11038991	3300007550	Estuarine	MAQKDPPRGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0102917_11363472	3300007590	Estuarine	AHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV*
Ga0102918_10476031	3300007593	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA*
Ga0102919_11005291	3300007597	Estuarine	KDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV*
Ga0102923_11325831	3300007606	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVT
Ga0102897_11186962	3300007617	Estuarine	AQKVPPHGVTEGLFLCQLTVLRALAKNLDRAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0102872_11285822	3300007621	Estuarine	MAQKDPPHGVAEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
Ga0102878_10306952	3300007624	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIISPLFGAL
Ga0102894_10359062	3300007632	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSI
Ga0102901_11789452	3300007634	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0102901_12195821	3300007634	Estuarine	MAQKDPPQGVTKGLFLYQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIISPLFGAL
Ga0102906_10529411	3300007637	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0102902_11785251	3300007644	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV*
Ga0102902_12201352	3300007644	Estuarine	AHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0105737_11906991	3300007862	Estuary Water	MAQKDPPLGVAKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA*
Ga0105748_104255922	3300007992	Estuary Water	TFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
Ga0102893_12331242	3300008052	Estuarine	VTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0114354_10929381	3300008119	Freshwater, Plankton	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0114354_11616821	3300008119	Freshwater, Plankton	FAHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0114336_10319311	3300008261	Freshwater, Plankton	AHKAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0104242_10008382	3300008962	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0102829_10953991	3300009026	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKDLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0102864_11801301	3300009051	Estuarine	MAQKDPPQGVAEGLFCCQLSVCCQLSVFRAFAKNLARAATKTGLLNSLISIKMKDLSIVSPLFGALSNRLARQKSITALYVDNNAKQVASSVMSQ
Ga0114973_104950532	3300009068	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSRQLILQKSITALAVDNNG*
Ga0114980_100178546	3300009152	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSRLNLQKSIVALSVDNNA*
Ga0114980_101566212	3300009152	Freshwater Lake	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV*
Ga0114980_102252721	3300009152	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVFRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSNTALAVDNNG*
Ga0114980_107985602	3300009152	Freshwater Lake	MAQKDPPQGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0114981_100972892	3300009160	Freshwater Lake	NPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
Ga0114970_102415712	3300009163	Freshwater Lake	AHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0114970_103589831	3300009163	Freshwater Lake	AHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
Ga0114975_100156856	3300009164	Freshwater Lake	MAQKDPPHGITEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSTISPFFGASSSQLILKKSITTLSVDNNV*
Ga0114975_100274461	3300009164	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINVKDVSILSPLFGASSSH*
Ga0114969_101977221	3300009181	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNG*
Ga0114971_106470482	3300009185	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0136236_10245752	3300010230	Freshwater	HGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSIIAVAVDNNV*
Ga0102883_11630071	3300010312	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITALAVDNNG*
Ga0139557_10009382	3300011010	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0151620_12027872	3300011268	Freshwater	FAHMAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0119951_10049272	3300012000	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFLGASSSPLLHQKSITTLAVDNNE*
Ga0119955_10457052	3300012006	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFLGASSSPLLHQKSITTLAVDNNG*
Ga0157210_10459942	3300012665	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLIL*
Ga0164292_102902262	3300013005	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPLFGASSSQLILQKSITAVSVDNNA*
Ga0187842_11911832	3300018790	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL
Ga0187843_102215562	3300019093	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE
Ga0187843_103483611	3300019093	Freshwater	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSPLLLRKSITTLAVDNNG
Ga0211732_11468841	3300020141	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLMSSLISINMKDVSILSPLFGASSSQLLLQKSITALSVDNNA
Ga0211736_103512272	3300020151	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLLLQKSITTLSVDNNA
Ga0211729_104461302	3300020172	Freshwater	AEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSIKMKDVSILSPLFGASSSQLLLQKSITALSVDNNA
Ga0210301_13167472	3300021325	Estuarine	MAQKDPPHEVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIATLSVDNNA
Ga0222712_100221483	3300021963	Estuarine Water	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL
Ga0214917_100555552	3300022752	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFLGASSSPLLHQKSITTLAVDNNE
Ga0214917_101551111	3300022752	Freshwater	MAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL
Ga0214921_100643634	3300023174	Freshwater	RLTANPLTFAHMAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISIKMKDVSIVSPFFGASSSQLIL
Ga0244777_102118092	3300024343	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0244776_100560444	3300024348	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV
Ga0208147_10834012	3300025635	Aqueous	PLTFAHMAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL
Ga0255106_10180342	3300027125	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATSTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0255082_10526901	3300027139	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA
Ga0255113_10660712	3300027147	Freshwater	NPLTFTHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH
Ga0255115_10253122	3300027148	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSV
Ga0208554_10594992	3300027212	Estuarine	NPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGAL
Ga0208024_10520992	3300027222	Estuarine	PPHGATEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0208446_10952262	3300027263	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNN
Ga0208801_10214292	3300027367	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATSTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0255133_10235251	3300027368	Freshwater	GKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0255137_10049901	3300027375	Freshwater	EGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0209247_10567222	3300027468	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0255084_10601372	3300027488	Freshwater	NPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA
Ga0208682_10354412	3300027531	Estuarine	KDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIISPLFGAL
Ga0255085_11119281	3300027538	Freshwater	MAQKDPPHGATEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0209552_10167072	3300027563	Freshwater Lake	FAHMAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0209651_10460172	3300027581	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0255119_10299772	3300027596	Freshwater	PLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0209357_10476031	3300027656	Freshwater Lake	QKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0209551_10186261	3300027689	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL
Ga0209087_10076064	3300027734	Freshwater Lake	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV
Ga0209596_13239511	3300027754	Freshwater Lake	LFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE
Ga0209296_10527912	3300027759	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV
Ga0209598_103122802	3300027760	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSRQLILQKSITSLVVDNNG
Ga0209088_100842612	3300027763	Freshwater Lake	KDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV
Ga0209088_101115771	3300027763	Freshwater Lake	MAQKDPPQGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE
Ga0209134_100299272	3300027764	Freshwater Lake	RLTANPLTFAHVAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLILKKSTTALAVDNNG
Ga0209500_100592592	3300027782	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL
Ga0209550_101336161	3300027892	Freshwater Lake	AHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL
Ga0209191_10166051	3300027969	Freshwater Lake	AQKDPPHGITEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSTISPFFGASSSQLILKKSITTLSVDNNV
Ga0209298_100794341	3300027973	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVFRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSNTALAVDNNG
Ga0304730_11001552	3300028394	Freshwater Lake	MAQKDPPQGVTKGLFLTQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL
Ga0315908_113733662	3300031786	Freshwater	TVNPLTFAHMAQKDPPHGVTKGLFLCQLSVFKALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSPLLLQKSITALAVDNNG
Ga0315905_100280699	3300032092	Freshwater	MAQKDPPHGDTKGLFLCQLSVFSALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSPLLLQKAISTLAVDNNE
Ga0315905_102847812	3300032092	Freshwater	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0315905_114445911	3300032092	Freshwater	TNPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0335023_0003779_2801_3001	3300034050	Freshwater	MAQKDPPQGVAEGLFRCQLSVCCQLSVFRAFAKNLARAATRTGLLNSLISIKMKDVSIVSPLFGAL
Ga0335019_0329379_358_597	3300034066	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPLFGASSSQLILQKSITAVSVDNNA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083895

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences