Metagenome Family F083879

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083879
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	71 residues
Representative Sequence	VTRRSKRTLKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.04 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	73.21 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.250 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (18.750 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.179 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.01% Coil/Unstructured: 66.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF02371	Transposase_20	30.36
PF13560	HTH_31	4.46
PF01807	zf-CHC2	3.57
PF01548	DEDD_Tnp_IS110	1.79
PF01594	AI-2E_transport	0.89
PF01381	HTH_3	0.89
PF14119	DUF4288	0.89
PF14690	zf-ISL3	0.89
PF13518	HTH_28	0.89
PF02452	PemK_toxin	0.89
PF02281	Dimer_Tnp_Tn5	0.89
PF00498	FHA	0.89
PF02559	CarD_CdnL_TRCF	0.89
PF13358	DDE_3	0.89
PF03050	DDE_Tnp_IS66	0.89
PF03781	FGE-sulfatase	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	32.14
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	3.57
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.89
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.89
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
All Organisms	root	All Organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
cellular organisms	root	All Organisms → cellular organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	20.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	20.54 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	6.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	4.46 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.68 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.68 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.89 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.68 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.68 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	0.89 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	2.68 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.68 %
Sporolituus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus	0.89 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2.68 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.68 %
Sporolituus thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus → Sporolituus thermophilus	0.89 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02RXFJL	Not Available	523	Open in IMG/M
2170459003\|FZ032L002JXZB8	Not Available	561	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105498259	Not Available	657	Open in IMG/M
3300001686\|C688J18823_10604680	Not Available	700	Open in IMG/M
3300002568\|C688J35102_119253452	Not Available	662	Open in IMG/M
3300002568\|C688J35102_120171632	Not Available	910	Open in IMG/M
3300003218\|JGI26339J46600_10057256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1027	Open in IMG/M
3300003861\|Ga0031654_10099279	Not Available	815	Open in IMG/M
3300004092\|Ga0062389_101370918	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300004092\|Ga0062389_101547018	Not Available	846	Open in IMG/M
3300004152\|Ga0062386_100100483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2222	Open in IMG/M
3300004153\|Ga0063455_100543168	Not Available	738	Open in IMG/M
3300005332\|Ga0066388_100235162	Not Available	2467	Open in IMG/M
3300005332\|Ga0066388_104689877	Not Available	696	Open in IMG/M
3300005454\|Ga0066687_10081678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporolituus → Sporolituus thermophilus	1591	Open in IMG/M
3300005458\|Ga0070681_10315641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1472	Open in IMG/M
3300005518\|Ga0070699_101934409	Not Available	539	Open in IMG/M
3300005531\|Ga0070738_10055441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2432	Open in IMG/M
3300005531\|Ga0070738_10056610	All Organisms → cellular organisms → Bacteria	2393	Open in IMG/M
3300005548\|Ga0070665_101730954	Not Available	632	Open in IMG/M
3300005575\|Ga0066702_10947041	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005607\|Ga0070740_10039405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2514	Open in IMG/M
3300005764\|Ga0066903_100616571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1885	Open in IMG/M
3300005764\|Ga0066903_103760510	Not Available	816	Open in IMG/M
3300006032\|Ga0066696_10553855	Not Available	751	Open in IMG/M
3300006034\|Ga0066656_10335369	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	977	Open in IMG/M
3300006052\|Ga0075029_100459869	Not Available	835	Open in IMG/M
3300006052\|Ga0075029_100622061	Not Available	723	Open in IMG/M
3300006102\|Ga0075015_100075239	Not Available	1652	Open in IMG/M
3300006162\|Ga0075030_101044458	Not Available	643	Open in IMG/M
3300006806\|Ga0079220_11046212	Not Available	654	Open in IMG/M
3300007982\|Ga0102924_1373467	Not Available	545	Open in IMG/M
3300009098\|Ga0105245_12491377	Not Available	571	Open in IMG/M
3300009521\|Ga0116222_1007318	All Organisms → cellular organisms → Bacteria	5333	Open in IMG/M
3300009521\|Ga0116222_1218389	Not Available	821	Open in IMG/M
3300009522\|Ga0116218_1003421	All Organisms → cellular organisms → Bacteria	8159	Open in IMG/M
3300009524\|Ga0116225_1012076	All Organisms → cellular organisms → Bacteria	4655	Open in IMG/M
3300009525\|Ga0116220_10580208	Not Available	514	Open in IMG/M
3300009672\|Ga0116215_1140243	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1075	Open in IMG/M
3300009672\|Ga0116215_1322742	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300009698\|Ga0116216_10317253	Not Available	949	Open in IMG/M
3300009764\|Ga0116134_1310306	Not Available	542	Open in IMG/M
3300009824\|Ga0116219_10048277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2528	Open in IMG/M
3300010339\|Ga0074046_10237545	Not Available	1135	Open in IMG/M
3300010376\|Ga0126381_103597397	Not Available	608	Open in IMG/M
3300010379\|Ga0136449_100108620	All Organisms → cellular organisms → Bacteria	5648	Open in IMG/M
3300010379\|Ga0136449_100185556	All Organisms → cellular organisms → Bacteria	3991	Open in IMG/M
3300010379\|Ga0136449_100256231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3243	Open in IMG/M
3300010379\|Ga0136449_104550735	Not Available	509	Open in IMG/M
3300012208\|Ga0137376_11192041	Not Available	651	Open in IMG/M
3300012212\|Ga0150985_101992148	Not Available	801	Open in IMG/M
3300012212\|Ga0150985_106487782	Not Available	626	Open in IMG/M
3300012212\|Ga0150985_109709833	Not Available	539	Open in IMG/M
3300012212\|Ga0150985_116836362	Not Available	576	Open in IMG/M
3300012361\|Ga0137360_11770950	Not Available	523	Open in IMG/M
3300012469\|Ga0150984_101511420	Not Available	967	Open in IMG/M
3300012469\|Ga0150984_112390622	Not Available	818	Open in IMG/M
3300012469\|Ga0150984_114571678	Not Available	536	Open in IMG/M
3300012960\|Ga0164301_11907980	Not Available	502	Open in IMG/M
3300012987\|Ga0164307_11906327	Not Available	504	Open in IMG/M
3300012989\|Ga0164305_11487154	Not Available	600	Open in IMG/M
3300015371\|Ga0132258_13150233	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300015373\|Ga0132257_103284898	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300016294\|Ga0182041_11862908	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	558	Open in IMG/M
3300017823\|Ga0187818_10017637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3052	Open in IMG/M
3300017928\|Ga0187806_1032216	Not Available	1555	Open in IMG/M
3300017933\|Ga0187801_10113377	Not Available	1036	Open in IMG/M
3300017939\|Ga0187775_10028774	Not Available	1580	Open in IMG/M
3300017946\|Ga0187879_10021801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3948	Open in IMG/M
3300017955\|Ga0187817_10096644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1856	Open in IMG/M
3300017961\|Ga0187778_10127060	Not Available	1598	Open in IMG/M
3300017961\|Ga0187778_10230455	Not Available	1186	Open in IMG/M
3300017966\|Ga0187776_10261761	Not Available	1110	Open in IMG/M
3300017970\|Ga0187783_10341330	Not Available	1091	Open in IMG/M
3300017970\|Ga0187783_10850622	Not Available	658	Open in IMG/M
3300017972\|Ga0187781_10151728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1626	Open in IMG/M
3300017972\|Ga0187781_10744084	Not Available	710	Open in IMG/M
3300017995\|Ga0187816_10271031	Not Available	742	Open in IMG/M
3300018033\|Ga0187867_10497164	Not Available	671	Open in IMG/M
3300018057\|Ga0187858_10331100	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	959	Open in IMG/M
3300018058\|Ga0187766_10415374	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	892	Open in IMG/M
3300018058\|Ga0187766_10449686	Not Available	860	Open in IMG/M
3300018064\|Ga0187773_10043334	Not Available	2040	Open in IMG/M
3300018086\|Ga0187769_10104446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2039	Open in IMG/M
3300018086\|Ga0187769_10223650	Not Available	1396	Open in IMG/M
3300018088\|Ga0187771_10485396	Not Available	1045	Open in IMG/M
3300021372\|Ga0213877_10007235	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300021560\|Ga0126371_11957199	Not Available	704	Open in IMG/M
3300026557\|Ga0179587_10667136	Not Available	685	Open in IMG/M
3300026872\|Ga0207785_1002875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1796	Open in IMG/M
3300026908\|Ga0207787_1001628	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2781	Open in IMG/M
3300027039\|Ga0207855_1043219	Not Available	608	Open in IMG/M
3300027568\|Ga0208042_1024669	All Organisms → cellular organisms → Bacteria → Proteobacteria	1548	Open in IMG/M
3300027570\|Ga0208043_1004930	All Organisms → cellular organisms → Bacteria	4688	Open in IMG/M
3300027641\|Ga0208827_1150239	Not Available	648	Open in IMG/M
3300027706\|Ga0209581_1029618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2518	Open in IMG/M
3300027812\|Ga0209656_10051501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2323	Open in IMG/M
3300027915\|Ga0209069_10151276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1155	Open in IMG/M
3300027965\|Ga0209062_1024528	All Organisms → cellular organisms → Bacteria	3511	Open in IMG/M
3300030706\|Ga0310039_10316246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300031564\|Ga0318573_10807775	Not Available	504	Open in IMG/M
3300031670\|Ga0307374_10106326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2399	Open in IMG/M
3300032160\|Ga0311301_10115631	All Organisms → cellular organisms → Bacteria	5103	Open in IMG/M
3300032160\|Ga0311301_10158132	All Organisms → cellular organisms → Bacteria	4064	Open in IMG/M
3300032160\|Ga0311301_10319628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2464	Open in IMG/M
3300032160\|Ga0311301_10824340	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1268	Open in IMG/M
3300032261\|Ga0306920_100111113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4064	Open in IMG/M
3300032261\|Ga0306920_103116625	Not Available	623	Open in IMG/M
3300032829\|Ga0335070_10188349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2064	Open in IMG/M
3300032896\|Ga0335075_10182238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2549	Open in IMG/M
3300032896\|Ga0335075_10234776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2137	Open in IMG/M
3300033134\|Ga0335073_11567920	Not Available	631	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.18%
Host-Associated	Host-Associated	9.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Aquatic	Environmental → Aquatic	18.75%
Plants	Host-Associated → Plants	9.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Freshwater	Environmental → Aquatic → Freshwater	13.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.36%
Sediment	Environmental → Aquatic → Sediment	4.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.46%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	11.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Clay	Environmental → Terrestrial → Soil → Clay	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	18.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.57%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02109220	2070309004	Green-Waste Compost	DLELVTYNISSEQGSHLVEDLAPPGGPDLGLGEVVDLEVLVRTFLDRNHQACSRLRIARMVGEF
E4A_10515180	2170459003	Grass Soil	MLKEDLELVTYNVSSENGSQLVEDFTPPGGPYLSLGEAVDLEIVVRTFIDRNHQACSRLRIARMVGEF
INPhiseqgaiiFebDRAFT_1054982592	3300000364	Soil	VVTYNVSFEGGSHLVEDFVPPGGPYLALGEAVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
C688J18823_106046801	3300001686	Soil	LRLRGIVTRRSKRTLKEDLEIVTYNVSSENGSHLVEDFAPPAGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF*
C688J35102_1192534521	3300002568	Soil	LKEDLELVTYHVSSENGSQLVEDFTTPGGPYLPLGEVVDLEIVVRTFIDRNHQACSRLRIARMVGEF*
C688J35102_1201716321	3300002568	Soil	VTRRSKRTLKEDLEIVTYNVSSENGSHLVEDFAPPAGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF*
JGI26339J46600_100572562	3300003218	Bog Forest Soil	LKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0031654_100992792	3300003861	Freshwater Lake Sediment	LKEDLELVTYSVSSETGSHFVEDFTPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF*
Ga0062389_1013709181	3300004092	Bog Forest Soil	LKEDLEVVTYNVSSEQGSHLVEDFATPGGPYLAVGEQVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0062389_1015470181	3300004092	Bog Forest Soil	GQRGVAKPTSSGGLRVRGIVTRRSKRALKEDLELVTYNVSSENGSHQVEDFATPGGPYLGLGEEVDLEVVVRTFTDKNQQACSRLRIARMVGEF*
Ga0062386_1001004833	3300004152	Bog Forest Soil	LKEDLEIVTYTVSSENGSQLVEDFAPPAGPYLALGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0063455_1005431682	3300004153	Soil	LKEDLELVTYHVSSENGSQLVEDFTTPGGPYLPLGEVVDLEIVVRTFIDRNHQACSRLRIARMVGEV*
Ga0066388_1002351622	3300005332	Tropical Forest Soil	LRLRGRVTRRSKRTLKEDLEVVTYNISSENGSHLVEDFAPPGGPYLALGQEVDLEVVVRTFADKNHQACSRLRIARMVGEF*
Ga0066388_1046898771	3300005332	Tropical Forest Soil	VLKADWELVTYQVSSENGSHPVEDFTSPGGPYLALGQEVDLEVVVRTFVDRNQQACSRLRIARMVGEF*
Ga0066687_100816781	3300005454	Soil	LKEDLELVTYHVASENGSHPVEDFTAPGGPYLALGQDVDLEVMVRTFTDKNHQVCWRLRISRLVGEF*
Ga0070681_103156412	3300005458	Corn Rhizosphere	MVTRRSKRTLKEDLEVVTYNVSSEQGSHLVEDFTPGGGPYLALGQQVDLEVVVRTFVDKNHQACSRLRIARMVGEF*
Ga0070699_1019344091	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TCSGGLRLRGIVTQRSKRALKGDLELVTYNVSSEHGSHLVEDFTGPGGPYLSLGEEIDLEVVVRTFIDKSQLPRSRLRIARTLGEF*
Ga0070738_100554412	3300005531	Surface Soil	VTRRSKRALKEDLELVTYHVSSENGSHPVEDLAPPGGPYLALGQAVDLEVVVRTFTDRNHQVCWRLRIARLVGEF*
Ga0070738_100566101	3300005531	Surface Soil	LRLRGRVTRRSKRALKADLEIVTYHVACENGSHLVEDFTPPGGPYLSLGQEVDLEVVVRTFTDKNQQVCWRLRIARMVGEF*
Ga0070665_1017309541	3300005548	Switchgrass Rhizosphere	MVTYCISSQNGSHLVEDFAPLGGPYFALGQEVDLEVVVRTFIDKNHQACSRLRIARMF
Ga0066702_109470411	3300005575	Soil	MLKEDLELVTYNVSSENGSQLVEDFTPPGGPYLSLGEADDLEIVVRTFIDRNHQACSRLRIARMVGEF*
Ga0070740_100394054	3300005607	Surface Soil	VTRRSKRALKADLEIVTYHVACENGSHLVEDFTPPGGPYLSLGQEVDLEVVVRTFTDKNQQVCWRLRIARMVGEF*
Ga0066903_1006165711	3300005764	Tropical Forest Soil	VTRRSKRTLKDDWELVTYNVSFENGSQTVEDFAAPGGPYLSLGEAVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0066903_1037605101	3300005764	Tropical Forest Soil	VTRRSKRALKEDLELVTYHVASENGSHLVEDFTPPGGPYLALGQEVDLEVGIRTFTDKNHQVCWRLRIAR
Ga0066696_105538551	3300006032	Soil	MLKEDLELVTYNVSSENGSQLVEDFAAPGGPYLGLGEVVDLEVGVRTFVDKNQQVCSRLRIARMVGEF*
Ga0066656_103353692	3300006034	Soil	VTRRSKRALKEDLELVTYQVASENGSHPVEDFTAPGGPYLALGQDVDLEVMVRTFTDKNHQVCWRLRISRLVGEF*
Ga0075029_1004598692	3300006052	Watersheds	LKEDLELVTYSVSSETGSHFVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF*
Ga0075029_1006220612	3300006052	Watersheds	VTRRSKRTLKEDLELVTYNVSSETGSQQVEDLASPGGPYLALGEKVDLEVVVRTFADKNQQACSRLRIARMVGEF*
Ga0075015_1000752391	3300006102	Watersheds	VTRRSKRALKEDLELVTYSVSSETGSHFVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF*
Ga0075030_1010444581	3300006162	Watersheds	VTRRSKRTLKEDLELVTYNVSSETGSQQVEDLASPGGPYLALGEKVDLEVVVRTFIDKNQQACSRLRIARMLGEF*
Ga0079220_110462122	3300006806	Agricultural Soil	VTRRSKRALKEDLELVTYHVASENGSHLVEDFTLPGGPYLALGQEVDLEVVVRTFTDKNHQVCWRLRIARLVGEF*
Ga0102924_13734671	3300007982	Iron-Sulfur Acid Spring	MHERAYQKPNPTPRANENGSQLVEDFALPGGPYLSVGQEVDLEVVVRTFADENQQVCSRLRIARTVGEF*
Ga0105245_124913771	3300009098	Miscanthus Rhizosphere	LRLRGIVTRRSKRTLKEDLELVTYNVSSENGSHLVEDFAPPGGPYLALGEQVDLEVVVRTFIDKNHQACSRLRIARMAGEF*
Ga0116222_10073182	3300009521	Peatlands Soil	VTRRSKRTLKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFIDKNQQACSRLRIARMVGEF*
Ga0116222_12183891	3300009521	Peatlands Soil	VTRRSKRALKEDLELVTYSVSSETGSHMVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMAGEF*
Ga0116218_10034217	3300009522	Peatlands Soil	LKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVCEF*
Ga0116225_10120767	3300009524	Peatlands Soil	LKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFIDKNQQACSRLRIARMVGEF*
Ga0116220_105802081	3300009525	Peatlands Soil	VTRRSKRALKEDLELVTYSVSSETGSHFVEDFAPPGGPHLSLGQEVDLEVVVRTFADKNQQACSQLRIA
Ga0116215_11402433	3300009672	Peatlands Soil	VVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFIDKNQQACSRLRIARMVGEF*
Ga0116215_13227422	3300009672	Peatlands Soil	VVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0116216_103172532	3300009698	Peatlands Soil	VTRRSKRALKEDLELVTYSVSSETGSHFVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMAGEF*
Ga0116134_13103061	3300009764	Peatland	LKEDLEVVTYNVSSENGSQLVEDFAPPGGTYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0116219_100482772	3300009824	Peatlands Soil	VTRRSKRTLKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0074046_102375452	3300010339	Bog Forest Soil	VTRRSKRALKEDLELVTYSVSSETGSHFVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRL
Ga0126381_1035973972	3300010376	Tropical Forest Soil	PASRGGLRLRGIVTRRSKRTLKEDLELVTYNVSSETGSHLVEDFAAPGGPYLSLGEQVDLEIVVRTFIDKNHQACSRLRIARMAGEF*
Ga0136449_1001086204	3300010379	Peatlands Soil	LRLRGKVTRRSKRALKEDLEIVTDTVASENGSQLVEDFAPPAGPYLAMGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0136449_1001855564	3300010379	Peatlands Soil	LKEDVELVTYNVSSENGSHLVEDFTPPGGPYLGLGEAVDLEIVVRTFIDRNHQACSRLRIARMVGEF*
Ga0136449_1002562312	3300010379	Peatlands Soil	VARRSKRTLKEDVEVVTYNVSSENGSYLVEDFTPPGGPYLAIGQAVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0136449_1045507351	3300010379	Peatlands Soil	LKEDLEIVTYTVSSENGSQLVEEFTPPDGPYLVLGQEVDLEVVVRTFVDKNQQACSRRRIARMVGEF*
Ga0137376_111920411	3300012208	Vadose Zone Soil	MVTRRSKRTLKEDLELVTYNVSSEHGSQLVEDFAAPGGPYLALGEEVDLEVVVRTFVDKTQQAC
Ga0150985_1019921481	3300012212	Avena Fatua Rhizosphere	LKEDLELVTYHVSSENGSQLVEDFTTPGGPYLPLGEVVDLEIVVRTFIDRNRQACSRLRIARMVGEF*
Ga0150985_1064877821	3300012212	Avena Fatua Rhizosphere	VVTRRSKRALKEDLEVMTYHVTSEKGSHPVEEFAPPGGPYLSPGEEVDPEVSVRTFVDRTQQACSRLRIARMVGEF*
Ga0150985_1097098332	3300012212	Avena Fatua Rhizosphere	LKEDLELVTYNVSSESGSQLVEDFTAPGGPYLRLGEAVDLEIIVRTFIDRNHQACSRLRIARMVGEF*
Ga0150985_1168363622	3300012212	Avena Fatua Rhizosphere	LKEDLEIVTYHVSSENGSHWVEEFATPGGPYLALGQEVDLEVVVRTFTDRNHQACTRLRIARMVGEF*
Ga0137360_117709501	3300012361	Vadose Zone Soil	LKEDLELVTYNVSSENGSQLVEDFTPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF*
Ga0150984_1015114201	3300012469	Avena Fatua Rhizosphere	MLKEDLEVVTYNVTSEQGSHLVEDFTPGGGPYLALGQQVDLEVVVRTFIDKNHQACSRLRIARMVGEF*
Ga0150984_1123906222	3300012469	Avena Fatua Rhizosphere	EDLEIVTYHVSSENGSHWVEEFATPGGPYLALGQEVDLEVVVHTFTDKNQQACSRLRIARMVGEF*
Ga0150984_1145716781	3300012469	Avena Fatua Rhizosphere	LKEDLELVTYHVASENGSHLVEDFAPPGGPYFTLGEAVDLEVVVRTFVDKNQQACARLRLARMVGEF*
Ga0164301_119079801	3300012960	Soil	VSSENGSQLVEDFTPSGGPYLSLGEQVDLEIVVRTFIDKNHQACSRLRIARMAGEF*
Ga0164307_119063272	3300012987	Soil	VIRRSKRTLKEDLELVTYNVSSETGAHLVEDLAPPGGPYLSLGEQVDLEIVVRTFIDKNHQACSRL
Ga0164305_114871541	3300012989	Soil	VTRRSKRTLKEDLELVTYNVSSENGSQLVEDFTPPGGPYLGLGQEVDLEVIVRTFVDKNHQACSRLRIARLVGEF*
Ga0132258_131502332	3300015371	Arabidopsis Rhizosphere	LKEDLELVTYNVSSENGSQLVEDFAPPGGPYLCLGEEVDLEIVIRLFTDKNQQACSRLRIARMLGEF*
Ga0132257_1032848982	3300015373	Arabidopsis Rhizosphere	SKRTLKEDLELVTYNVSSENGSQLVEDFAPPGGPYLCLGEEVDLEIVIRLFTDKNQQACSRLRIARMLGEF*
Ga0182041_118629081	3300016294	Soil	KRVLKEDLELVTYSVSFETGSHLVEDFAAPGGPYLSLGQEVDLEVVVRTFTDKNQQACSRLRIARMVGEF
Ga0187818_100176372	3300017823	Freshwater Sediment	VTRRSKRALKEDLEIVTYTVSSENGSQLVEDFAPPAGPYLALGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187806_10322162	3300017928	Freshwater Sediment	VTRRSKRALKEDLEILTYTVSSENGSQLVEDFAPPAGPYLALGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187801_101133773	3300017933	Freshwater Sediment	VTRRSKRALKEDLELVTYSVSSETGSHFVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF
Ga0187775_100287742	3300017939	Tropical Peatland	VTRRSKRTLKEDLELVTYNVSSENGSHLVEDFATPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGES
Ga0187879_100218012	3300017946	Peatland	VVTRRSKRTLKEDLEIVTYNVSSENGSQLVEDFASPGGPYLSLGQDVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187817_100966442	3300017955	Freshwater Sediment	VTRRSKRALKEDLEIVTYTVSSENGSQLVEDFAPPAGPYLALGQEVGLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187778_101270602	3300017961	Tropical Peatland	VTRRSKRALKEDLEVVTYNGSSENGSQLVEDFAPPGGPHLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187778_102304551	3300017961	Tropical Peatland	KSFGGLRLRGVVTRRSKRALREDLELVTYNVSSESGSHLVEDFTPPGGPYLTVGQEVDLEVVVRTFADKNHQPCSRLRIARMLGEF
Ga0187776_102617611	3300017966	Tropical Peatland	VTQRSKRALKGDLELVTYNVSSQHGSHLVEDFTAPGGPYLSLGEEIDLEVVVRTFIDKNQLPCSRLRIARMLGEF
Ga0187783_103413301	3300017970	Tropical Peatland	VTRRSKRALKDDLELVTYHVSSENGSHLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187783_108506221	3300017970	Tropical Peatland	LREDLEVVTYSVSSENGSHFVEDVAPPGGPYLALGLEVDLEVVVRTFADKNHQACSRLRLARMVGEF
Ga0187781_101517281	3300017972	Tropical Peatland	MGVVTRRSKRALREDLEVVTYNVSFQNGSHLVEDLTSPGGPYFALGEEVDLEVAIRTFIDKNQQACSRLRIARIVGEF
Ga0187781_107440841	3300017972	Tropical Peatland	VTQRSKHTLKENLEVVTYSVSFENGSQLVEDFAPPGRPYLALGQEVDLEVVVRTFADKNQRACSRLRIARVLGEF
Ga0187816_102710312	3300017995	Freshwater Sediment	SGGLRLRGTVTRRSKRALKEDVELVTYNVSSESGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF
Ga0187867_104971642	3300018033	Peatland	VTRRSKRTLKEDLEVVTYNVSSENGSQLVEDFAPPGGTYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187858_103311002	3300018057	Peatland	LKEDLEIVTYNVSSENGSQLVEDFASPGGPYLSLGQDVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187766_104153742	3300018058	Tropical Peatland	VTRRSKRALKEDLELVTYHVSSENGSHLVEDFATPGGPYLSLGQEVDLEVVVRAFVDKNQQACSRLRIARMVGEF
Ga0187766_104496862	3300018058	Tropical Peatland	VTRRSKRALKEDLELVTYHVASENGSQPVEDFTPPGGPYLALGQEVDLEVVVRTFTDKNHQVCWRLRIARLVGEF
Ga0187773_100433342	3300018064	Tropical Peatland	VTRRSKRTLKEDLELVTYNVSSENGSHLVEDFATPGGPYLSLGQEVDLEVVVRTFADKNQQTCSRLRIARMVGEF
Ga0187769_101044462	3300018086	Tropical Peatland	VTRRSKRALKEDLEVVTYNVSSENGSQLVEDFAPPGGPYISLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0187769_102236501	3300018086	Tropical Peatland	VTRRSKRTLKKDLELVTYNVSSENGSHLVEDFAPPGGPYLALGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF
Ga0187771_104853962	3300018088	Tropical Peatland	VTRRSKRTLKEDLEVVTYNVSSENGSQLVEDFAPPGGPYISLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0213877_100072353	3300021372	Bulk Soil	VTRRSKRSLKEDLELVTYHVGSENGSHPVEDFTQPGGPYLALGQDVDLEVVVRAFADRNQQVCWRLRIARLAGEF
Ga0126371_119571991	3300021560	Tropical Forest Soil	LEVVTYNVSSENGSHLVEDFAPPVGPYLSLGQEVDLEVAVRTFADKNQQACSRLRIARRVGEF
Ga0179587_106671361	3300026557	Vadose Zone Soil	VTRRSKRTLKEDLELVTYNVSSENGSQLVEDFTQPGGPYLSLGQEVDLEVVVRTFADKNQ
Ga0207785_10028752	3300026872	Tropical Forest Soil	VTRRSKRALKEDLELVTYSVSSETGSHFVEDYAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF
Ga0207787_10016282	3300026908	Tropical Forest Soil	LKEDLELVTYSVSSETGSHFVEDYAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF
Ga0207855_10432191	3300027039	Tropical Forest Soil	VTRRSKRALKEDLELVTYSVSSETGSHFVEDYAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLR
Ga0208042_10246693	3300027568	Peatlands Soil	LKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0208043_10049308	3300027570	Peatlands Soil	VTRRSKRTLKEDLEVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0208827_11502391	3300027641	Peatlands Soil	VTRRSKRALKEDLELVTYSVSSETGSHMVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF
Ga0209581_10296184	3300027706	Surface Soil	VTRRSKRALKEDLELVTYHVSSENGSHPVEDLAPPGGPYLALGQAVDLEVVVRTFTDRNHQVCWRLRIARLVGEF
Ga0209656_100515014	3300027812	Bog Forest Soil	LKEDLEIVTYTVSSENGSQLVEDFAPPAGPYLALGQEVDLEVVVRTFVDKNQQACSRLRIARMVGE
Ga0209069_101512761	3300027915	Watersheds	YSVSSETGSHMVEDFAPPGGPYLSLGQEVDLEVVVRTFADKNQQACSRLRIARMVGEF
Ga0209062_10245285	3300027965	Surface Soil	LRLRGRVTRRSKRALKADLEIVTYHVACENGSHLVEDFTPPGGPYLSLGQEVDLEVVVRTFTDKNQQVCWRLRIARMVGEF
Ga0310039_103162461	3300030706	Peatlands Soil	VTRRSKRTLKEDLELVTYNVSSQNGSQLVEDFTPPGGPYLSLGQEVDLEIVVRTFTDKNHQACSRLRIARMVGEF
Ga0318573_108077751	3300031564	Soil	YSVSFETGSHLVEDFAAPGGPYLSLGQEVDLEVVVRTFTDKNQQACSRLRIARMVGEF
Ga0307374_101063263	3300031670	Soil	LKEDLELVTYNVSSENGSHQVEDFGTPGGPYLGLGEEVDLEVVVRTFTDKNQQVCSRLRIARMVGEF
Ga0311301_101156311	3300032160	Peatlands Soil	VTRRSKRTLKEDVELVTYNVSSENGSHLVEDFTPPGGPYLGLGEAVDLEIVVRTFIDRNHQACSRLRIARMVGEF
Ga0311301_101581324	3300032160	Peatlands Soil	LRLRGKVTRRSKRALKEDLEIVTDTVASENGSQLVEDFAPPAGPYLAMGQEVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0311301_103196282	3300032160	Peatlands Soil	VARRSKRTLKEDVEVVTYNVSSENGSYLVEDFTPPGGPYLAIGQAVDLEVVVRTFVDKNQQACSRLRIARMVGEF
Ga0311301_108243401	3300032160	Peatlands Soil	EVVTYNVSSENGSQLVEDFAPPGGPYLSLGQEVDLEVVVRTFIDKNQQACSRLRIARMVGEF
Ga0306920_1001111131	3300032261	Soil	VLKEDLELVTYSVSFETGSHLVEDFAAPGGPYLSLGQEVDLEVVVRTFTDKNQQACSRLRIARMVGEF
Ga0306920_1031166252	3300032261	Soil	VLKADWELVRYHVASEDGSHLVEDFTPPGGPYLALGQEVDLEVVVRTFTDKNQQACWRLRIA
Ga0335070_101883493	3300032829	Soil	VTYHVSSENGLHVVEDFATPGGPYLSLGDVVDLEIVVRTFVDKNQQPSSRLRIARMVGEF
Ga0335075_101822383	3300032896	Soil	LKEDLEVVTYNVSSENGSQQVEEFGPPGGPYLSLGQEVDLEVVVRTFIDKNQQACSRLRIARMVGEF
Ga0335075_102347762	3300032896	Soil	VTRRSKRALKEELELVTYHVASENGSHLVEDFTPPGGPYFALGQEVDLEVVVRTFADRNHQPCSRLRIARMFGEF
Ga0335073_115679201	3300033134	Soil	VTRRSKRALREDLELVTYYVSSENGSQFVEDLATPGGPYLALGEEIDLEVMVRTFTDKNQQTCSRLRIARMVGEF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083879

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences