Metagenome / Metatranscriptome Family F083828

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083828
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	61 residues
Representative Sequence	MESPLIIPLAVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELELERVKQGK
Number of Associated Samples	71
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.64 %
% of genes near scaffold ends (potentially truncated)	17.86 %
% of genes from short scaffolds (< 2000 bps)	58.04 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.464 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (26.786 % of family members)
Environment Ontology (ENVO)	Unclassified (36.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (44.643 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.64% β-sheet: 0.00% Coil/Unstructured: 37.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13349	DUF4097	11.61
PF13490	zf-HC2	8.93
PF00275	EPSP_synthase	4.46
PF00643	zf-B_box	2.68
PF08281	Sigma70_r4_2	1.79
PF13671	AAA_33	0.89
PF00923	TAL_FSA	0.89
PF16757	Fucosidase_C	0.89
PF02021	UPF0102	0.89
PF02621	VitK2_biosynth	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.89
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	0.89
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.46 %
Unclassified	root	N/A	20.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.46 %
Unclassified	root	N/A	20.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.46 %
Unclassified	root	N/A	20.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.96 %
Unclassified	root	N/A	20.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.93 %
Unclassified	root	N/A	20.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.36 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.93 %
Unclassified	root	N/A	20.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.57 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.93 %
Unclassified	root	N/A	20.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.93 %
Unclassified	root	N/A	20.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003852\|Ga0031655_10064976	All Organisms → cellular organisms → Bacteria → Proteobacteria	1546	Open in IMG/M
3300004473\|Ga0068919_1329556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300005529\|Ga0070741_10033453	All Organisms → cellular organisms → Bacteria	7016	Open in IMG/M
3300005541\|Ga0070733_10412453	Not Available	899	Open in IMG/M
3300006865\|Ga0073934_10003496	All Organisms → cellular organisms → Bacteria	28760	Open in IMG/M
3300006865\|Ga0073934_10009223	All Organisms → cellular organisms → Bacteria	12738	Open in IMG/M
3300009039\|Ga0105152_10053191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300009039\|Ga0105152_10179158	Not Available	871	Open in IMG/M
3300009614\|Ga0116104_1038484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300009839\|Ga0116223_10457375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300010391\|Ga0136847_10135091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1805	Open in IMG/M
3300010391\|Ga0136847_11864639	Not Available	916	Open in IMG/M
3300010391\|Ga0136847_12441584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1765	Open in IMG/M
3300010391\|Ga0136847_12892098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300011077\|Ga0138572_1068192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300011083\|Ga0138560_1212572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012931\|Ga0153915_12642819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012931\|Ga0153915_13158903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012964\|Ga0153916_10113832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2584	Open in IMG/M
3300012964\|Ga0153916_11391351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300012964\|Ga0153916_11828774	Not Available	679	Open in IMG/M
3300012964\|Ga0153916_12371667	Not Available	597	Open in IMG/M
3300014152\|Ga0181533_1247917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300014160\|Ga0181517_10002998	All Organisms → cellular organisms → Bacteria	16496	Open in IMG/M
3300014162\|Ga0181538_10380369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300014493\|Ga0182016_10537795	Not Available	671	Open in IMG/M
3300014654\|Ga0181525_10278872	Not Available	912	Open in IMG/M
3300017934\|Ga0187803_10119005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300017934\|Ga0187803_10490208	Not Available	501	Open in IMG/M
3300017941\|Ga0187850_10014906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4719	Open in IMG/M
3300017941\|Ga0187850_10044772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2320	Open in IMG/M
3300017946\|Ga0187879_10235976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300017972\|Ga0187781_10057145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2685	Open in IMG/M
3300017973\|Ga0187780_10486746	Not Available	880	Open in IMG/M
3300017975\|Ga0187782_10026078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4257	Open in IMG/M
3300018005\|Ga0187878_1003879	All Organisms → cellular organisms → Bacteria	11915	Open in IMG/M
3300018018\|Ga0187886_1061614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300018024\|Ga0187881_10261779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300018025\|Ga0187885_10245277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300018033\|Ga0187867_10080437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1913	Open in IMG/M
3300018042\|Ga0187871_10200979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300018085\|Ga0187772_10980375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300018086\|Ga0187769_10089120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2203	Open in IMG/M
3300018086\|Ga0187769_11332981	Not Available	543	Open in IMG/M
3300018088\|Ga0187771_10031451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4039	Open in IMG/M
3300018088\|Ga0187771_10086501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2504	Open in IMG/M
3300018088\|Ga0187771_11268115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300018088\|Ga0187771_11409861	Not Available	591	Open in IMG/M
3300018088\|Ga0187771_11481764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300018088\|Ga0187771_11524593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300018088\|Ga0187771_11561217	Not Available	560	Open in IMG/M
3300018089\|Ga0187774_10953321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300019264\|Ga0187796_1295119	Not Available	501	Open in IMG/M
3300019273\|Ga0187794_1239035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300019273\|Ga0187794_1487730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300019275\|Ga0187798_1548005	Not Available	547	Open in IMG/M
3300025310\|Ga0209172_10007055	All Organisms → cellular organisms → Bacteria	11914	Open in IMG/M
3300025310\|Ga0209172_10051972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2538	Open in IMG/M
3300025324\|Ga0209640_10099246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2511	Open in IMG/M
3300025843\|Ga0209182_10003821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4542	Open in IMG/M
3300025843\|Ga0209182_10078403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300027842\|Ga0209580_10010197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4040	Open in IMG/M
3300027896\|Ga0209777_10003723	All Organisms → cellular organisms → Bacteria	18650	Open in IMG/M
3300027896\|Ga0209777_10140676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	2001	Open in IMG/M
3300031463\|Ga0272448_1196561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300031539\|Ga0307380_10093917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3114	Open in IMG/M
(restricted) 3300031604\|Ga0315309_1006182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6654	Open in IMG/M
3300031707\|Ga0315291_10001547	All Organisms → cellular organisms → Bacteria	30743	Open in IMG/M
3300031707\|Ga0315291_10019729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8062	Open in IMG/M
3300031707\|Ga0315291_10362187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1394	Open in IMG/M
3300031772\|Ga0315288_10059684	All Organisms → cellular organisms → Bacteria → Acidobacteria	4504	Open in IMG/M
3300031772\|Ga0315288_10618126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300031862\|Ga0315280_10000097	All Organisms → cellular organisms → Bacteria → Acidobacteria	159169	Open in IMG/M
3300031862\|Ga0315280_10004209	All Organisms → cellular organisms → Bacteria	21467	Open in IMG/M
3300031862\|Ga0315280_10031680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5110	Open in IMG/M
3300031862\|Ga0315280_10095087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2139	Open in IMG/M
3300031885\|Ga0315285_10327894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300031952\|Ga0315294_10541468	Not Available	1055	Open in IMG/M
3300031965\|Ga0326597_10205359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2306	Open in IMG/M
3300031999\|Ga0315274_10606226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300032046\|Ga0315289_10676626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300032069\|Ga0315282_10002924	All Organisms → cellular organisms → Bacteria	30952	Open in IMG/M
3300032069\|Ga0315282_10004291	All Organisms → cellular organisms → Bacteria	24886	Open in IMG/M
3300032069\|Ga0315282_10027346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7460	Open in IMG/M
3300032069\|Ga0315282_10280205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300032069\|Ga0315282_10550933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300032070\|Ga0315279_10071107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3142	Open in IMG/M
3300032070\|Ga0315279_10500489	Not Available	797	Open in IMG/M
3300032118\|Ga0315277_10045209	All Organisms → cellular organisms → Bacteria	5150	Open in IMG/M
3300032156\|Ga0315295_10615649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300032163\|Ga0315281_10047250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5278	Open in IMG/M
3300032173\|Ga0315268_10088934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2910	Open in IMG/M
3300032173\|Ga0315268_10253943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1693	Open in IMG/M
3300032173\|Ga0315268_11337957	Not Available	727	Open in IMG/M
3300032342\|Ga0315286_10026791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5965	Open in IMG/M
3300032401\|Ga0315275_10112886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2988	Open in IMG/M
3300032770\|Ga0335085_10020290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9498	Open in IMG/M
3300032770\|Ga0335085_10659676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300032805\|Ga0335078_11658227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300032898\|Ga0335072_11144642	Not Available	697	Open in IMG/M
3300033233\|Ga0334722_10035867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4040	Open in IMG/M
3300033402\|Ga0326728_10164233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2357	Open in IMG/M
3300033486\|Ga0316624_10015822	All Organisms → cellular organisms → Bacteria	4069	Open in IMG/M
3300033486\|Ga0316624_12243490	Not Available	508	Open in IMG/M
3300033513\|Ga0316628_100007613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8993	Open in IMG/M
3300033513\|Ga0316628_100094384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3328	Open in IMG/M
3300033513\|Ga0316628_100323476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1928	Open in IMG/M
3300033977\|Ga0314861_0155880	Not Available	1111	Open in IMG/M
3300033977\|Ga0314861_0500830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300034083\|Ga0373901_103088	Not Available	599	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	60.71%
Terrestrial	Environmental → Terrestrial	38.39%
Bioremediation	Engineered → Bioremediation	0.89%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	56.25%
Soil	Environmental → Terrestrial → Soil	37.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.46%
Peat	Environmental → Terrestrial → Peat	0.89%
Metal	Engineered → Bioremediation → Metal	0.89%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	33.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	7.14%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	3.57%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.68%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Loam	Environmental → Terrestrial → Soil → Loam	0.89%
Clay	Environmental → Terrestrial → Soil → Clay	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	33.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	27.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	26.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	14.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.04%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.36%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	5.36%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	3.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.57%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	3.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.57%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011077	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011083	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025843	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300031463	Hot spring sediment microbial communities from Yellowstone National Park, WY, United States - YNP-CB-019-1	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031604 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP4	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031655_100649762	3300003852	Freshwater Lake Sediment	MDTPFIIPLGVFVMVVLIVAITQLVKVRDMEMDVHQRLHQEELEHQRKMRELDLELERLKDSDK*
Ga0068919_13295561	3300004473	Peatlands Soil	PLAVFAMVVLIVAMAELTKIRNLEVDVHQKLHLEEMEHQRKMRELELELERIKQGT*
Ga0070741_100334536	3300005529	Surface Soil	MFPGTLIPLAVFGMVVLIVAIVHMTKLRDKEIEIQHRLHLEELEHRRRMQELEMRAQSLKGPQ*
Ga0070733_104124533	3300005541	Surface Soil	MDNGLLIPLAVFAMVVLIVGITGMAKLHDKEMDVQQSLHAELLEHQRKMKELDQELERLKSGL*
Ga0073934_1000349626	3300006865	Hot Spring Sediment	MFSPTMVPLALFLMVVVIVALTQVVKLRDKEIAVQRQLHAATLEHQRKMEELQAELERVKKGGSAISP*
Ga0073934_1000922310	3300006865	Hot Spring Sediment	MSPTLIPLAVFAMVVLIVAIVHVTKLRDKEIALQQRLHAAQLEHQRKMQELQAELERVKKD*
Ga0105152_100531913	3300009039	Lake Sediment	MESPFIIPLAVFAMVVLIVAIVKLAKTRDREIEVQQRLHLEQLEHQRKMQELERELARVKKGG*
Ga0105152_101791582	3300009039	Lake Sediment	MESPLIIPLAVFAMVVLIVAIVKLAKIRERELEVQQKLHLEQMEHQRKMQELELELARLRKGE*
Ga0116104_10384843	3300009614	Peatland	MLSPFVIPLGVFAMVAVIVAITHMAKLRDKEMQIQQQLHAAQLEHQRKMLELQTELERVKRG*
Ga0116223_104573752	3300009839	Peatlands Soil	MIPLAVFAMVVLIVAIVNLVSIREKEIDVHQKLYATEMEHQRKMRELELELERIKQGS*
Ga0136847_101350913	3300010391	Freshwater Sediment	IIPLACFAMVVLIVAITQMVKVRDKEMEVHQKLHQEQLQHQLRMKELDLELARVRQTGGLAG*
Ga0136847_118646392	3300010391	Freshwater Sediment	MFSPFIIPLAAFAMVVLIVAITQLAKIRDKEMEAQQKLHLEQLEHQRKMQELELELPRIKQG*
Ga0136847_124415844	3300010391	Freshwater Sediment	MDSPVIIPLAVFAMVALIVAITKMAKVRDRELEVQQRLHLEQLEHQRKMKELEVELERVKQAM*
Ga0136847_128920981	3300010391	Freshwater Sediment	MFPPTIIPLAVFLMVVLIVAISQIARLRDKEIQVQQQLHAAQLEHQRKMLELQAELERVKKEA*
Ga0138572_10681922	3300011077	Peatlands Soil	MIPLAVFAMVVLIVAIVNLVSIREKEIDVHQKLYATEMEHQRKMRELELELQRIKQGS*
Ga0138560_12125721	3300011083	Peatlands Soil	LAVFAMVVLIVAIVNLVSIREKEIDVHQKLYATEMEHQRKMRELELELERIKQGT*
Ga0153915_126428191	3300012931	Freshwater Wetlands	MHSPFIIPLAIFALAVIIVAIVKLAKLRDQEMEVRRRLHLEQLEHQRKMQELQLELERVKSKQ*
Ga0153915_131589031	3300012931	Freshwater Wetlands	PLIIPLAVFAMVALIVGITKMAKIRDRELEVHQRLHLEQLEHERKMKALELELERARKAM
Ga0153916_101138325	3300012964	Freshwater Wetlands	MDSPAIIPLAVFAMVVLIVAIVKLAKTRDREIEVQQRLHLEQLEHQRKMQELERELERVKKGG*
Ga0153916_113913513	3300012964	Freshwater Wetlands	MDSPVIIPLAAFAMVVLIVAIAKLAKVRDREIELQQRLHLEQMEHQRKMQELELELTRLRKGG*
Ga0153916_118287741	3300012964	Freshwater Wetlands	MHSPFIIPLAIFALAVIIVAIVKLAKLRDQEMEVRRRLHLEQLEHQRKMQELQLELERVKSKG*
Ga0153916_123716671	3300012964	Freshwater Wetlands	MPRLWGKEADTMHTPFIIPLSVFAMVVLIVAIVKLAKLRDKEMEVQQRLHLEQLDHQRKMQELQLELERVKSKQ*
Ga0181533_12479172	3300014152	Bog	MIPLAVFAMVILIVAIVNLVSIREKEIDVHQKLYATEMEHQRKMRELELELERIKQRT*
Ga0181517_100029987	3300014160	Bog	MVVIIVAIANIAGLREVEIDVHQKLHAKEMEHQRKMRELDMELERIKSGM*
Ga0181538_103803693	3300014162	Bog	VPLAVFAMVVVIVAITQLAGIRDKELEVHEKLHMDELEHQRKMQELESELQRIKQGT*
Ga0182016_105377952	3300014493	Bog	MSPFFIPLGVFAMVVLIVAITQMVGIRDKEIEVHQKLHLEEMDHQRKMRELELELERIKQGS*
Ga0181525_102788721	3300014654	Bog	MSPIVIPLAVFAMVVLIVAIANVTNLRNREIEVHQQVHAQEMEHRTKMRVLDLELQRIKQGT*
Ga0187803_101190051	3300017934	Freshwater Sediment	MDTPFIIPLGVFAMVVLIVAITQLVKVRDMEMDVHQRLHQEELEHQRKMRELELELERVKSGGKG
Ga0187803_104902082	3300017934	Freshwater Sediment	MESPVIIPLGVFAMVVLIVAISHLVKIRDKEMDVQQRLHQEELEHQRKMRELDLELERVRESR
Ga0187850_100149065	3300017941	Peatland	MLSPFVIPLGVFAMVAVIVAITHMAKLRDKEMQIQQQLHAAQLEHQRKMLELQTELERVKRG
Ga0187850_100447726	3300017941	Peatland	MPMSPFLIPLAVFAMVVLIVAITHTARIREKEVEVQQKLHVQEMEHQRIMRELELELER
Ga0187879_102359763	3300017946	Peatland	MSPFFIPLGVFAMVVLIVAITQMISIRDKEMEVHQRLHLEEMDHQRKMRELELELQRIKHGT
Ga0187781_100571454	3300017972	Tropical Peatland	MSPFLIPLGVLAMVVLIVAITQLVKLREKEMEVQQKLHLEEMDHQRRMRELELELERIKQVK
Ga0187780_104867463	3300017973	Tropical Peatland	MSPFVIPLGVFAIVALIVAITQVAKIHDLELEVHSRLHLEEMEHQRQMHEMKLELERIRREK
Ga0187782_100260788	3300017975	Tropical Peatland	MSPFLIPLGVFAMVVLIVAITQLVKLREKEMEVQQKLHLEEMDHQRRMRELELELERIKQVK
Ga0187782_105708153	3300017975	Tropical Peatland	MSPFVIPLAVFAMVVLIVAIAELTKIRNLEVDIHQKLHLEEMEHRQKLQELELQLQRIKQGA
Ga0187878_10038795	3300018005	Peatland	MESPFIIPLAVFAMVVLIVAIVKLAKTRDREIEVQQRLHLEQLEHQRKMQELERELERVKKGG
Ga0187886_10616141	3300018018	Peatland	MESPFIIPLAVFAMVVLIVAIVKLAKTRDREIEVHQRLHLEQLEHQRKMQELELELARLKKSG
Ga0187881_102617791	3300018024	Peatland	MSPFFIPLAVFAMVVLIVAITQVANLRGKEMEVHQKLHLEEMEHLRKMRELELELERIKQGT
Ga0187885_102452772	3300018025	Peatland	VFAMVVLIVAIAEVAKIRNLEIEIHQKLHAKEMEHQRKMRELDLELERIKQGT
Ga0187867_100804373	3300018033	Peatland	MSPFFIPLGVFAMVVLIVAITQMVGIRDKEIEVHQKLHLEEMDHQRKMRELELELERIKQGS
Ga0187871_102009793	3300018042	Peatland	MSPFFIPLGVFAMVVLIVAITQMISIRDKEMEVHQRLHLEEMDHQRKMRELELELERIKQGS
Ga0187784_113020982	3300018062	Tropical Peatland	MSPFVIPLAVFAMVVLIVAIAELTKIRNLEVDIHQKLHLEEMEHRQKLQELELQRQRIKQGA
Ga0187772_109803752	3300018085	Tropical Peatland	IPLAVFAMVVLIVAMAELTKIRNLGVEVHQKLHVEEMEHQRKMRELELGLERIKSGA
Ga0187769_100891203	3300018086	Tropical Peatland	MESPSIIPLGVFLMVVLIVAITQLVKIRDMEIDVHQQLHQEELEHQRKMRELDLELERLKDSNQ
Ga0187769_113329811	3300018086	Tropical Peatland	MSPLVIPLGIFAMVVLIVAITQVVKIRDKELEVQHNVHMEELDHRRRMRELELELERAKLGK
Ga0187771_100314518	3300018088	Tropical Peatland	MGPAIIPLAVFAMVVLIVAITHMTKIRDKEMEVQQRLHEEELEHQRKMRELDLELQRVRESR
Ga0187771_100865012	3300018088	Tropical Peatland	MGPAIIPLAVFAMVVLIVAISHMAKIRDKEIDVQQRLHEEELEHQRKMRELDLELQRVRESR
Ga0187771_112681151	3300018088	Tropical Peatland	YAVNHPLGGFRKGVLIVAISQLVKIRDLEMDVHQKLHQEELEHQRKMRELDLELERVKSS
Ga0187771_114098611	3300018088	Tropical Peatland	MESPSIIPLGVFLMVVLIVAITQLVKIRDMEIDVHQQLHQEELEHQRKMREL
Ga0187771_114817641	3300018088	Tropical Peatland	MDSDWIIPLAVFAMVVLIVAIVSLVRLRETEMEVHQRLHMEEAEHQRKMRELELDLERVKQGP
Ga0187771_115245932	3300018088	Tropical Peatland	MFVPLVIFAMVVLIVALIHVTKIRDLEIEIHGKLQAREIEHLCKMREQELELERIKQGA
Ga0187771_115612172	3300018088	Tropical Peatland	MSPHLIPLEVFAMVVLIVAITQTHGIRNVEWEVQQKLHALEMEHQRKMRELELEFERIKEQA
Ga0187774_109533211	3300018089	Tropical Peatland	NQTPEAPVIIPLAAFAMVVLIVAIVKLAKIRDRELEVQQKLHLEQMEHQRKMQELELELARLRKRE
Ga0187796_12951191	3300019264	Peatland	MVVLIVAITQLVRLREKEMDVQQKLHLEEMDHQHRMRELELEIERIKQVK
Ga0187794_12390351	3300019273	Peatland	LGVFAMVILIVAITHLVKLREKEMDVQQKLHLDEMEHQRRMRELDLEMERIKQVK
Ga0187794_14877302	3300019273	Peatland	FAMVVLIVAMAELTKIRNLEVEVHQKLHLEELEHQRKMRELELELERIKQGT
Ga0187798_15480051	3300019275	Peatland	MSPLVIPLAVFAMVVLIVAIAEMTKIRSLEVDFHQKLHRAEMEHQQKMRELEL
Ga0209172_100070556	3300025310	Hot Spring Sediment	MFSPTMVPLALFLMVVVIVALTQVVKLRDKEIAVQRQLHAATLEHQRKMEELQAELERVKKGGSAISP
Ga0209172_100519725	3300025310	Hot Spring Sediment	MSPTLIPLAVFAMVVLIVAIVHVTKLRDKEIALQQRLHAAQLEHQRKMQELQAELERVKK
Ga0209640_100992464	3300025324	Soil	MESPVIIPLAVFAMVALIVAITKMAKVRDRELEVQQRLHLEQLEHQRKMKELELELERVKQGN
Ga0209182_100038217	3300025843	Lake Sediment	MESPLIIPLAVFAMVVLIVAIVKLAKIRDRELEVQQKLHLEQMEHQRKMQELELELARLRKGE
Ga0209182_100784033	3300025843	Lake Sediment	IPLAVFAMVVLIVAIVKLAKTRDREIEVQQRLHLEQLEHQRKMQELERELARVKKGG
Ga0209580_100101973	3300027842	Surface Soil	MDNGLLIPLAVFAMVVLIVGITGMAKLHDKEMDVQQSLHAELLEHQRKMKELDQELERLKSGL
Ga0209777_100037238	3300027896	Freshwater Lake Sediment	MDTPFIIPLGVFVMVVLIVAITQLVKVRDMEMDVHQRLHQEELEHQRKMRELDLELERLKDSGK
Ga0209777_101406762	3300027896	Freshwater Lake Sediment	MLSPFVIPLGVFAMVAVIVAITHMAKLRDKEMQIQQQLHAAQLEHQRKMLELQTELERVKQG
Ga0272448_11965614	3300031463	Sediment	MDSPVIIPFAVFAMVVLIVAIVNLAKTRDREIEVQQRLHLERLEHERKMKELELELERIKSGG
Ga0307380_100939171	3300031539	Soil	MFSPFIIPLAVFAMVALVVAITQVSKIRDKEMEVQQKLHLEQLEHQRKMQELELELQRV
(restricted) Ga0315309_10061827	3300031604	Sediment	VIIPLAAFAMVVLLVAIVKLAKIRDRELEVQQKLHLEQMEHQRKMQELELELARLRKGE
Ga0315291_1000154719	3300031707	Sediment	VIIPLAAFAMVVLIVAIVKLAKIRDRELEVQQKLHLEQMEHQRKMQELELELARLRKGE
Ga0315291_100197294	3300031707	Sediment	MESPLIIPLAVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELELDRVKQGK
Ga0315291_103621871	3300031707	Sediment	MESPLIIPLGVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELELERVKQGK
Ga0315288_100596846	3300031772	Sediment	MESPLIIPLAVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELELERVKQGK
Ga0315288_106181263	3300031772	Sediment	MDSPLIIPLAVFAMVVLIVAIVKLAKTRDREIEVQQRLHLEQLEHQRKMQELERELERVKKGG
Ga0315280_1000009731	3300031862	Sediment	MFIPLAVFAMVVVIVAITQLAKTRDKEIEVHQRLHQEELEHQRKMRELELELERVKQGK
Ga0315280_1000420919	3300031862	Sediment	MSSPFIIPLAFFAMVVLIVAIVTMVKIRDKEIEVQHRLHLEELEHRRKMQELEREAERLKGAK
Ga0315280_100316807	3300031862	Sediment	VIIPLAAFAMVVLIVAIVKLAKIRDRELEVQQKLHLEQLEHQRKMQELELELARLRKGE
Ga0315280_100950873	3300031862	Sediment	MESPLIIPLAVFAMVVLLVAITKLAKIRDKEMEVQQRLHLEQMEHQRKMQELERELERVKKGG
Ga0315285_103278941	3300031885	Sediment	MESPLIIPLAVFAMVVLIVGIVKLAKIRDRELEVQQKLHLELMEHQRKMQELELELARLRKGE
Ga0315294_105414684	3300031952	Sediment	VIIPLAAFAMVVLIVGIVKLAKIRDRELEVQQKLHLELMEHQRKMQELELELARLRKGE
Ga0326597_102053592	3300031965	Soil	MFSPFIIPLASFVMVVLIVAITQMVKIRDKEMEVQQKLHLEQLEHQRKMQELEIELQRVKGG
Ga0315274_106062261	3300031999	Sediment	MESPLIIPLGVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELEQTREARE
Ga0315289_106766264	3300032046	Sediment	MESPLIIPLAVFAMVALLVAIAKLAKIRDKEMEVQQRLHLEQMEHQRKMQELERELERV
Ga0315282_1000292411	3300032069	Sediment	MSSPFIIPLAFFAMVVLIVAIVTMVKIRDKEMEVQQRLHLEELEYRRKMQELEREAERLKGAK
Ga0315282_100042918	3300032069	Sediment	MFSPFLIPLAVFAMVAVIVAITQMAKLRDKEMQIQQQLHAAQLEHQRKMLELQAELERVKLG
Ga0315282_100273467	3300032069	Sediment	MHTPFIIPLSVFAMVVLIVAIVKLAKIRDKEMEVQQRLHLEQLEHQRKMQELQLELERLKPQG
Ga0315282_102802051	3300032069	Sediment	MHILSNPLAVFALVVLIVAITAVARIRDKEIEVQQRLYLEEMAHQRKLKELELELERVRQGR
Ga0315282_105509331	3300032069	Sediment	MHSPLIVPLSVFAMVVLIIAIVKLAKIRDKEMEVQQRLHLEELEHRRKMQELQLELERVKSKE
Ga0315279_100711074	3300032070	Sediment	MESPLIIPLAVFAMVVLLVAITKLAKIRDKEMEVQQRLHLEQMAHQRKMQELERELERVKKGG
Ga0315279_105004891	3300032070	Sediment	MESPLIIPLGVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELDLERVKQGK
Ga0315277_100452095	3300032118	Sediment	MESPLIIPLAVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELDLERVKQGK
Ga0315295_106156493	3300032156	Sediment	MDSAAIISLAAFAMAVLIVAIVKLAKIRDRELEVQQKLHLEQMEHQRKMQELELELARLRKGE
Ga0315281_100472505	3300032163	Sediment	MSPLLVPLAAFAAVVLIVAMVNVTRLRDKEIAVQQQLHAAQLDHQRKMAELQAELERVKQGG
Ga0315268_100889346	3300032173	Sediment	MSPTVVPLAAFAAVVLIVALVKFTRLRDKEIAVQQQMHAAQLEHQRKMAELQAELERVKQGG
Ga0315268_102539434	3300032173	Sediment	MHTPFIIPLLIFAMVVIIVAIVKLGRLRDKEMEVQQRLHLEQLEHQRKMQELQLELERVKSKE
Ga0315268_113379571	3300032173	Sediment	MESPLIIPLGVFAMVVLIVAITKMAKIRDREIEVHQRLHLEQLEHQRKMKELELELERVKQEK
Ga0315286_100267914	3300032342	Sediment	MESPFIIPLAVFAMVVLIVAIVKLAKTRDREIEVQQRLHLEQLEHQRKMKELELELERIKKGG
Ga0315275_101128865	3300032401	Sediment	MESPFIIPLAVFAMVVLIVAIVKLAKIRDREIEVQQRLHLEQLEHQRKMQELELELARAKKGG
Ga0335085_100202908	3300032770	Soil	MSPFLIPLGVFAMVVVLVAIARTVRVRDKEMEVHQNLHMEELEHVRKMRELDLELERIKQGS
Ga0335085_106596762	3300032770	Soil	MWIPLAVFAMVVLIVAITQMVSLRETEVDVHQKLSASEMEHQRKMQELELELQRVKQGN
Ga0335078_116582271	3300032805	Soil	MSPLMIPLGIFAMVVLIVAITHLVKLREKEMEVQQKLHLDGMEHQRRMRELDLELERIKQVK
Ga0335072_111446422	3300032898	Soil	MSPFLIPLGIFAMVVLIVGISHTARIRDKEMQVHQRLHLEEMEHRRKMQELELELERIKQGN
Ga0334722_100358676	3300033233	Sediment	MDSPLVIPLAVFAMVALMVGISKMAKIRDRELEVHQRLHLGQLEHERKMKELELELERVRKAM
Ga0326728_101642334	3300033402	Peat Soil	IVPLGVFAMVVLLVAITQIVKIREKEMEVQQKLYIEEMEHHRRMRELELELDRIKQGK
Ga0316624_100158227	3300033486	Soil	MDSPVIIPLAVFAMVALIVAIVKMAKVRDRELEVQQRLHLEQLEHQRKMTELEIELERVKQAM
Ga0316624_122434901	3300033486	Soil	MDSPAIIPLAVFAMVALIVAITKMAKVRDRELEVQQRLHLEQLEHQRKMKELELELERIKQG
Ga0316628_10000761311	3300033513	Soil	MHSPLIIPLSVFAMVVLIVAIVKLAKIRDKEMEVHQRLHMEQLEHQRKMQELQRELDRVKSKE
Ga0316628_1000943844	3300033513	Soil	MDSPAIIPLAVFAMVALIVAITKMAKVRDRELEVQQRLHLEQLEHQRKMKELELELERIKQGN
Ga0316628_1003234764	3300033513	Soil	MDSPLIIPLAVFAMVVLIVAIVKLAKTRDREMEVQQRLHLEQLEHQRKMQELERELERVKKGG
Ga0314861_0155880_684_872	3300033977	Peatland	MSPFVIPLGIFAMVVLIVAITQVVKIRDKELEVQHNVHMEELDHRRRMRELELELERAKLGK
Ga0314861_0500830_108_299	3300033977	Peatland	MDSSLIIPLAVFAMVVLIVAIVSLVRVRETEMEVHQRLHMEEMDHQRKMRELELDLERVKQGR
Ga0373901_103088_148_339	3300034083	Sediment Slurry	MDSPAIIPLAVFAMVALIVAITKMAKVRDRELEVQQRLHLEQLEHQRKMKELELVLERVKQGM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters