Metagenome / Metatranscriptome Family F083813

Overview

Basic Information

• Family ID: F083813
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 112
• Average Sequence Length: 39 residues
• Representative Sequence: DEQKLRSDGYREQIAEALYKGIARYAASSKGVKVASAAK
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 3.57 %
• % of genes from short scaffolds (< 2000 bps): 1.79 %
• Associated GOLD sequencing projects: 94
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (96.429 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.607 % of family members)
• Environment Ontology (ENVO): Unclassified (28.571 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (51.786 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 35.82%
  β-sheet: 0.00%
  Coil/Unstructured: 64.18%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01850	PIN	8.93
PF00326	Peptidase_S9	8.04
PF13450	NAD_binding_8	3.57
PF00920	ILVD_EDD	3.57
PF07676	PD40	3.57
PF01402	RHH_1	2.68
PF16694	Cytochrome_P460	2.68
PF00440	TetR_N	1.79
PF03544	TonB_C	1.79
PF02954	HTH_8	1.79
PF03571	Peptidase_M49	0.89
PF13738	Pyr_redox_3	0.89
PF01022	HTH_5	0.89
PF00069	Pkinase	0.89
PF05345	He_PIG	0.89
PF07883	Cupin_2	0.89
PF01070	FMN_dh	0.89
PF10009	DUF2252	0.89
PF03683	UPF0175	0.89
PF01797	Y1_Tnp	0.89
PF13304	AAA_21	0.89
PF06580	His_kinase	0.89
PF03601	Cons_hypoth698	0.89
PF00486	Trans_reg_C	0.89
PF00850	Hist_deacetyl	0.89
PF04055	Radical_SAM	0.89
PF01979	Amidohydro_1	0.89
PF11008	DUF2846	0.89
PF04471	Mrr_cat	0.89
PF13091	PLDc_2	0.89
PF08238	Sel1	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	7.14
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.57
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.79
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.79
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.89
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.89
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.89
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.89
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.89
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.89
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.89

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.43 %
All Organisms	root	All Organisms	3.57 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.43 %
cellular organisms	root	All Organisms → cellular organisms	3.57 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.57 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.79 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.79 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300014495|Ga0182015_10047949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3142
3300018030|Ga0187869_10024792	All Organisms → cellular organisms → Bacteria	3380
3300027905|Ga0209415_10422154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064
3300030520|Ga0311372_12745146	All Organisms → cellular organisms → Bacteria	543

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.43%
Host-Associated	Host-Associated	3.57%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.54%
Aquatic	Environmental → Aquatic	25.89%
Plants	Host-Associated → Plants	3.57%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.50%
Freshwater	Environmental → Aquatic → Freshwater	18.75%
Peat	Environmental → Terrestrial → Peat	8.04%
Sediment	Environmental → Aquatic → Sediment	4.46%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.39%
Loam	Environmental → Terrestrial → Soil → Loam	8.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.14%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.25%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.46%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300004474	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)	Environmental
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300011081	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015372	Soil combined assembly	Host-Associated
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental
3300026004	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)	Environmental
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300029951	III_Palsa_N1 coassembly	Environmental
3300029999	I_Palsa_E3 coassembly	Environmental
3300030019	II_Fen_E2 coassembly	Environmental
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental
3300030294	II_Fen_E3 coassembly	Environmental
3300030520	III_Palsa_N2 coassembly	Environmental
3300030618	II_Palsa_E3 coassembly	Environmental
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10515651	3300001154	Forest Soil	SSPTDEQKLRSDGYREQVAEALYQGIARYAAGSHGIKVASAQR*
JGI12627J18819_102168601	3300001867	Forest Soil	SSPTDEQKLRSDGYREQIAEALYRGIARYAASSGKGVKVASAAK*
Ga0062387_1010971941	3300004091	Bog Forest Soil	DEQKLRSDGYREQIAEALYRGIARYAAWARGVKVASAVK*
Ga0062389_1030141961	3300004092	Bog Forest Soil	SSPTDEQKLRSDGYREQIAEALYKGIARYAAASRSVKVASAGK*
Ga0062386_1008702522	3300004152	Bog Forest Soil	SPTDEQKLRSDGYREQIAEALYKGIARYAASKTVKVASAAK*
Ga0068968_14408542	3300004474	Peatlands Soil	FVSSPTDERKLRVDSYREQIAEALFQGIAQYAAASREVKVASAGR*
Ga0072322_12280632	3300004973	Peatlands Soil	VSSPTDERKLRVDSYREQIAEALFQGIAQYAAASREVKVASAGR*
Ga0070735_100251605	3300005534	Surface Soil	LRSDGYREQIAEALYRGIARYAANSHGVKIASAGK*
Ga0068857_1009496122	3300005577	Corn Rhizosphere	QSDGYREKIAEALYRGIARYAASSRGLRLASAAK*
Ga0070761_107740342	3300005591	Soil	EQKLRSDGYREEIAEALYRGIARYAASSHGVKVASAGK*
Ga0070762_100335411	3300005602	Soil	QKLRSDGYREQIAEALYKGIARYAASSHGVKMAAK*
Ga0070763_102843252	3300005610	Soil	DEQKLRSDGYREQIAEALYRGIARYAAASHGVKVASAGK*
Ga0070763_103145571	3300005610	Soil	PTDEQKLRSDGYREEIAEALYKGIARYAATSKNVKIASAGK*
Ga0070764_106508743	3300005712	Soil	DEQKLRSDGYREQIAEALYRGIARYAAGSRGVKVASAGK*
Ga0075287_10630832	3300005873	Rice Paddy Soil	DEQKLRTDGYREQIAEALYRGIARYAGSSRAVKVATAAK*
Ga0070766_104281263	3300005921	Soil	KLRSDGYREQIAEALYKGIARYAAASRSVKVASAAK*
Ga0075019_103974751	3300006086	Watersheds	TDEQKLRSDGYREQIAEALYKGIARYAATSHGVKVASAAK*
Ga0075030_1003326114	3300006162	Watersheds	DEQKLRSDGYREQIAEALYKGIARYAASSKGVKVASAAK*
Ga0075030_1011018982	3300006162	Watersheds	LRSDGYREQIAEALYKGIARYASSSKGVKVASAAK*
Ga0075030_1016477491	3300006162	Watersheds	QKLRSDGYREQIAEALYKGIARYASSSKGVKVASAAK*
Ga0073928_100500833	3300006893	Iron-Sulfur Acid Spring	PTDERKLRNDGYREQVAEALYKGIARYAASSHGIKVASARR*
Ga0073928_101175201	3300006893	Iron-Sulfur Acid Spring	PTDERKLRNDGYREQVAEALYKGIARYAASSHGIKVASARH*
Ga0102924_12239751	3300007982	Iron-Sulfur Acid Spring	QKLRSDGYREQIAEALYRGIARYAAASRGVKVASVTK*
Ga0099829_109919791	3300009038	Vadose Zone Soil	DEQKLRSDGYREQIAEALYKGIARYAAASRGVKVASVK*
Ga0099830_113048271	3300009088	Vadose Zone Soil	KLRSDGYREQIAEALYKGIARYAAGSRGVKVAAR*
Ga0116128_11414241	3300009518	Peatland	QKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR*
Ga0116225_13262573	3300009524	Peatlands Soil	STDEQKLRSDGYREQIAEALYKGIARYAASSRGVKVASAGK*
Ga0116111_10892951	3300009616	Peatland	KLRSDGYREQIAEALYRGIARYAATSHSVKVASAAK*
Ga0116120_12316092	3300009641	Peatland	KLRSDGYREQIAEALYRGIARYAASSRGVKMASAAK*
Ga0116135_10065735	3300009665	Peatland	RSDGYREQIAEALYKGIARYAVASHGVKMASAAK*
Ga0116215_13305501	3300009672	Peatlands Soil	TDEQKLRSYGYREQIAEALYKGIARYAASSKGVKVASAGR*
Ga0116101_10196771	3300009759	Peatland	QKLRSDGYREQIAEALYKGIARYAASSRGVKVASAAK*
Ga0126384_113689422	3300010046	Tropical Forest Soil	TDEQKLRSDGYREQIAEALYRGIARYAASSKGVKMASAAK*
Ga0126379_127405662	3300010366	Tropical Forest Soil	SFVSSPADERHLQSTTYREQIAEALYKGIAHYAAASIHMKLASVR*
Ga0136449_1009002331	3300010379	Peatlands Soil	VSFVSSPTDEQKLRSDGYREQVAEALYKGIARYAASSHGINVASARR*
Ga0136449_1034622462	3300010379	Peatlands Soil	VSFVSSPTDEQKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR*
Ga0138575_11231501	3300011081	Peatlands Soil	EVSFVSSPTDERKLRVDSYREQIAEALFQGIAQYAAASREVKVASAGR*
Ga0137393_107330731	3300011271	Vadose Zone Soil	EQKLRSDGYREQIAEALYKGIARYAAGSRSVKVASVK*
Ga0137384_109694953	3300012357	Vadose Zone Soil	QKLRSDGYREQIAEALYKGIARYAASSHAVKVAAR*
Ga0137398_106656181	3300012683	Vadose Zone Soil	TDEQRLRSDGYREQIAEALYRGIARYAANSRSVKMASARNK*
Ga0137395_101825121	3300012917	Vadose Zone Soil	PTDERKLRNDGYREQIAEALYRGIARYAANSHAVKVASVGK*
Ga0137395_103677602	3300012917	Vadose Zone Soil	RSDGYREQIAEALYKGIARYAAGSRSVKVASAAK*
Ga0137419_100450793	3300012925	Vadose Zone Soil	EQRLRSDGYREQIADALYKGIARYAASSRGVKVASAAK*
Ga0126369_107741491	3300012971	Tropical Forest Soil	QKLRSDGYREQIAEALYRGIARYAAGSKGVKMASAAK*
Ga0181531_100413521	3300014169	Bog	DEQKLRSDGYREQIAEALYKGIARYAAGSRGVKMAAR*
Ga0182015_100479491	3300014495	Palsa	PTDEQKLRSDGYREQIAEALYKGIARYAAGSRGVKVASAGK*
Ga0182024_102734561	3300014501	Permafrost	KLRSDGYREQIAEALYKGIARYAATSHGVKVASAAK*
Ga0181516_102331501	3300014655	Bog	SSPTDEQKLRSDGYREQIAEALYKGIARYAASSHSVRVASVGK*
Ga0132258_100819328	3300015371	Arabidopsis Rhizosphere	TDEQKLRSDGYREQIAEALYRGIARYASNSKGVKMASAAK*
Ga0132256_1021750762	3300015372	Arabidopsis Rhizosphere	PTDEQKLRSDGYREQIAEALYKGIARYAANSRNVKVASARK*
Ga0187818_100090181	3300017823	Freshwater Sediment	DEQKLRSDGYREQVAEALYKGIARYAASSRGIRVVSARR
Ga0187849_12628531	3300017929	Peatland	PTDEQKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR
Ga0187853_103518432	3300017940	Peatland	GQKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR
Ga0187781_105865612	3300017972	Tropical Peatland	SSPTDEQKLRSDGYREEIAEALYRGIARYEASTHAVKLASAGK
Ga0187782_110180632	3300017975	Tropical Peatland	VSSPTDEQKLRSDGYREQIAEAIYKGIARYAADSKNVKVASN
Ga0187782_114459552	3300017975	Tropical Peatland	TDEQKLRSDGYREEIAEALYHGIARYAAANSKGAKLAAK
Ga0187881_104741691	3300018024	Peatland	SSPTDEQKLRSDGYREEIAEALYKGIARYAANSRGTKVASAAK
Ga0187869_100247921	3300018030	Peatland	QKLRSDGYREQIAEALYRGIARYAASSRGVKMASAAK
Ga0187863_101020921	3300018034	Peatland	KLRSDGYREQIAEALYRGIARYAASSHGVKVASAGK
Ga0187863_103124051	3300018034	Peatland	TDEQKLRSDGYREQIAEALYRGIARYAASSHGVKVASAWK
Ga0187784_109154301	3300018062	Tropical Peatland	DEQKLRSDGYREEIAEALYKGIARYAASSKGVKLASAGK
Ga0187772_112957262	3300018085	Tropical Peatland	EQKLRSDGYREQIAEALYRGMARYAANSHGVKMASAAK
Ga0187769_100854635	3300018086	Tropical Peatland	PTDEQKLRSDGYREQVAEALYKGIARYAASSRGIRVVSARR
Ga0187769_103788843	3300018086	Tropical Peatland	EQKLRSDGYREQVAEALYKGIARYAASSRGIKIVSARR
Ga0187771_116209641	3300018088	Tropical Peatland	KLRSDGYREQIAEALYKGIARYEATAHPVKMASAAR
Ga0210399_113568181	3300020581	Soil	LRSDMYREQIAEALYHGIARYAASDKGAKVASAAK
Ga0210388_108616531	3300021181	Soil	KLRSDGYREQIAEALYKGIARYAASSKGIKVASTGK
Ga0210388_109404321	3300021181	Soil	HRRTKLRSDGYREQIAEALYRGIARYAAASKGVKVAAK
Ga0210385_103300722	3300021402	Soil	QKLRSDGYREQIAEALYRGIARYAAASHGVKVASAGK
Ga0210397_114909601	3300021403	Soil	KLRSDMYREQIAEALYHGIARYAASDKGAKVASAAK
Ga0210383_112816902	3300021407	Soil	SSPTDEQKLRSDGYREQIAEALYKGIARYAAASRAVKVASAGK
Ga0210391_100524751	3300021433	Soil	SSPTDEQKLRSDGYREQIAEALYKGIARYAAASRSVKVASVTK
Ga0210391_100570501	3300021433	Soil	PTDEQKLRSDGYREQIAEALYKGIARYAAGSRGVKVASAGK
Ga0210391_100658986	3300021433	Soil	DEQKRRSDGYREQIAEALYKGIARYAASSRGVKVASAAK
Ga0182009_108219531	3300021445	Soil	KLQSDGYREKIAEALYKGIARYAISSRGVKMAAKQVASRASQ
Ga0224562_10017851	3300022733	Soil	KLRSDGYREEIAEALYKGIAHYAANSRGVKVASAAKQ
Ga0208323_10443371	3300025439	Peatland	SPTDEQQLRNDGYREQIAEALYKGIARYAAGSRGVKVASAAK
Ga0208455_10623781	3300025453	Peatland	SPTDGQKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR
Ga0208416_10193401	3300026004	Rice Paddy Soil	QKLRTDGYREQIAEALYRGIARYAGSSRAVKVATAAK
Ga0207676_111015722	3300026095	Switchgrass Rhizosphere	RSAEYRQQIAEALYKGIARYAATSHRASMASAAPMQ
Ga0209115_10928102	3300027567	Forest Soil	PTDEQKLRSDGYREQIAEALYRGIARYAAASKSVKVASAAK
Ga0208044_11498001	3300027625	Peatlands Soil	QKLRSDGYREQIAEALYKGIARYAASSRGVKVASAGK
Ga0209139_103140591	3300027795	Bog Forest Soil	SPTDEQKLRSDGYREQIAEALYKGIARYAASSKGEKVASTGK
Ga0209773_102512543	3300027829	Bog Forest Soil	DEQKLRSDGYREQIAEALYKGIARYAASTHSVKMASR
Ga0209580_106430022	3300027842	Surface Soil	KLHSGGYREQIAEALYRGIARYAASSHSVKVASANK
Ga0209068_106308952	3300027894	Watersheds	EQKLRSDGYRERIAEALYKGIARYAVASKGVKVASK
Ga0209415_101138491	3300027905	Peatlands Soil	DEQKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR
Ga0209415_104221542	3300027905	Peatlands Soil	QKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR
Ga0302219_100078641	3300028747	Palsa	SSPTDEQKLRSDGYREQIAEALYKGIARYAAGSRGVKLAAK
Ga0308309_109618241	3300028906	Soil	PTDEQKLRSDGYREEIAEALYKGIARYAATSKNVKIASAGK
Ga0311371_108410082	3300029951	Palsa	VSFVSSPTDEQKLRSVGYREQVAEALYKGIARYAASSHAVKVASAQRRPESATAKQ
Ga0311339_113823471	3300029999	Palsa	KLRSDGYREQIAEALYKGIARYAAASHGVKVASAGN
Ga0311348_109477111	3300030019	Fen	TDETKLESPSYRQRIAEALYKGIARYMEESRRVKMASTSAAKSAAR
Ga0302182_101570382	3300030054	Palsa	EQKLRSDGYREQIAEALYKGIARYAAASHGVKVASAGN
Ga0311349_107868221	3300030294	Fen	QKLRSDGYREQIAEALYKGIARYAASAGRGVKVASAAK
Ga0311372_127451462	3300030520	Palsa	TDEQKLRSDEYREQIAEALYKGIARYAASSRSVKVASAAK
Ga0311354_104196201	3300030618	Palsa	LRSDGYREQIAEALYKGIARYAAGSRGVKMASAAK
Ga0310039_103615712	3300030706	Peatlands Soil	KLRSDGYREQVAEALYKGIARYAASSHGIKVASARR
Ga0170818_1035918511	3300031474	Forest Soil	TDEQKLRSDGYREQIAEALYKGIARYAAGSKGVKVASTGK
Ga0302326_116281911	3300031525	Palsa	RLRSDGYREQVAEALYKGIARYAASFHGIKVTSARP
Ga0318541_107197002	3300031545	Soil	QKLRSDGYREQIAEALYKGIARYASASKGVKVASVR
Ga0310686_1166432251	3300031708	Soil	SPTDEQKLRSDGYREQIAEALYKGIARYAAGSRGVKMASAAK
Ga0307478_114859291	3300031823	Hardwood Forest Soil	KLRSDGYRERIAEALYKGIARYAANSRGVKVASAAKR
Ga0318536_105318252	3300031893	Soil	TDEQKLRSDGYREQIAEALYKGIARYASASKGVKVASVR
Ga0310916_109038221	3300031942	Soil	SPADEQKLRSDGYRERIAEALYKGIARYASSKGVKMASAAK
Ga0307479_105735062	3300031962	Hardwood Forest Soil	EQKLRTDGYREQIAEALYRGIARYAASSHSVKVASAGK
Ga0311301_105964711	3300032160	Peatlands Soil	QKLRSDGYREQVAEALYKGIARYAASSHGINVASARR
Ga0311301_115288302	3300032160	Peatlands Soil	VSFVSSPADEQKLRSDGYREQVAEALYKGIARYAASSHGIKVASARR
Ga0335078_106971801	3300032805	Soil	SPADEQKLRSDGYRERIAEALYRGIAHYAVQSKGVKMASAK
Ga0335075_111780302	3300032896	Soil	EQRLRSDGYREQIAEALYKGIARYAASSHPVKVASAGAR
Ga0335077_115465411	3300033158	Soil	EQKLRSDGYREQIAEALYKGIARYAASSKGVKVAAR
Ga0310914_108994211	3300033289	Soil	EQKLRSDGYREQIAEALYKGIARYASASKGVKVASVR