Metagenome / Metatranscriptome Family F083805

Basic Information
Family ID	F083805
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	41 residues
Representative Sequence	PEQRRQYAVALAEELLQFERPMPVMDNYDLLLANTKGAIQ
Number of Associated Samples	96
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.90 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	98.21 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (94.643 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (31.250 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.429 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.76% β-sheet: 0.00% Coil/Unstructured: 63.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01695	IstB_IS21	94.64
PF04011	LemA	0.89
PF09363	XFP_C	0.89
PF02899	Phage_int_SAM_1	0.89
PF02518	HATPase_c	0.89
PF08808	RES	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	94.64
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.89
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.89
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.89
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.36 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.89 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.36 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.89 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10266937	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300001867\|JGI12627J18819_10383795	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005541\|Ga0070733_11085835	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005617\|Ga0068859_100522417	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005618\|Ga0068864_101047996	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300006894\|Ga0079215_10452970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	781	Open in IMG/M
3300009137\|Ga0066709_103809423	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009520\|Ga0116214_1447453	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009548\|Ga0116107_1202244	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009628\|Ga0116125_1177688	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300009638\|Ga0116113_1188944	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009644\|Ga0116121_1108855	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010049\|Ga0123356_12485670	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300010361\|Ga0126378_11470465	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010362\|Ga0126377_13024956	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300010379\|Ga0136449_101041577	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300010429\|Ga0116241_11275727	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012202\|Ga0137363_10535930	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300012228\|Ga0137459_1234289	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300014491\|Ga0182014_10188639	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300014499\|Ga0182012_10531130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	762	Open in IMG/M
3300014501\|Ga0182024_12054570	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300014501\|Ga0182024_12626213	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300014657\|Ga0181522_10399621	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300014657\|Ga0181522_10536326	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300014658\|Ga0181519_10455775	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300014839\|Ga0182027_10678979	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300017988\|Ga0181520_10900084	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300017996\|Ga0187891_1161335	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300018009\|Ga0187884_10274086	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300018034\|Ga0187863_10099962	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300018034\|Ga0187863_10295054	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300018034\|Ga0187863_10824398	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300018037\|Ga0187883_10597340	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300018043\|Ga0187887_10345247	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300018465\|Ga0190269_11722497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	530	Open in IMG/M
3300020021\|Ga0193726_1248287	Not Available	722	Open in IMG/M
3300021329\|Ga0210362_1291560	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300021420\|Ga0210394_10445124	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300021477\|Ga0210398_10421551	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300022518\|Ga0224548_1032153	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300022872\|Ga0224526_1066176	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300023091\|Ga0224559_1074523	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300023254\|Ga0224524_1016670	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300024240\|Ga0224522_1074299	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300025434\|Ga0208690_1011206	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300025914\|Ga0207671_11143061	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025918\|Ga0207662_10214507	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300025945\|Ga0207679_11092226	Not Available	732	Open in IMG/M
3300025990\|Ga0208527_1026772	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300026095\|Ga0207676_10279311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1516	Open in IMG/M
3300028268\|Ga0255348_1035260	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300028379\|Ga0268266_11235845	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300028560\|Ga0302144_10308163	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300028574\|Ga0302153_10066065	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300028648\|Ga0268299_1098891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	824	Open in IMG/M
3300028745\|Ga0302267_10339059	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300028765\|Ga0302198_10241012	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300028774\|Ga0302208_10085675	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300028775\|Ga0302231_10234448	Not Available	767	Open in IMG/M
3300028788\|Ga0302189_10227570	Not Available	770	Open in IMG/M
3300028795\|Ga0302227_10125415	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300028798\|Ga0302222_10148914	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300028854\|Ga0302268_1116486	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300028866\|Ga0302278_10220342	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300028873\|Ga0302197_10182410	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300028873\|Ga0302197_10269037	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300028873\|Ga0302197_10453819	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300028874\|Ga0302155_10275887	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300028874\|Ga0302155_10415122	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300028909\|Ga0302200_10137216	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300028909\|Ga0302200_10157024	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300029883\|Ga0311327_10873700	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300029907\|Ga0311329_10517912	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300029915\|Ga0311358_10135294	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300029919\|Ga0302141_1050321	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300029922\|Ga0311363_10677359	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300029943\|Ga0311340_10707567	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300029953\|Ga0311343_10473855	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300029956\|Ga0302150_10093001	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300029956\|Ga0302150_10106961	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300029986\|Ga0302188_10157353	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300029986\|Ga0302188_10245156	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300029986\|Ga0302188_10387171	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300029998\|Ga0302271_10178415	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300030051\|Ga0302195_10411678	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300030058\|Ga0302179_10549950	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300030399\|Ga0311353_10432912	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300030503\|Ga0311370_10406796	All Organisms → cellular organisms → Bacteria → Acidobacteria	1708	Open in IMG/M
3300030507\|Ga0302192_10156174	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300030507\|Ga0302192_10201459	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300030508\|Ga0302185_10172325	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300030688\|Ga0311345_10526899	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300030688\|Ga0311345_10546548	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300030737\|Ga0302310_10381355	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300030838\|Ga0311335_11317521	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300030943\|Ga0311366_10453204	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300030943\|Ga0311366_10469223	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300031057\|Ga0170834_102164960	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300031234\|Ga0302325_12360080	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031236\|Ga0302324_101711555	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031259\|Ga0302187_10508864	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031261\|Ga0302140_11196357	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031524\|Ga0302320_11013363	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300031708\|Ga0310686_100709815	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031708\|Ga0310686_116583978	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031880\|Ga0318544_10076028	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300032272\|Ga0316189_11080327	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300032783\|Ga0335079_12213133	Not Available	524	Open in IMG/M
3300032805\|Ga0335078_10766985	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300034130\|Ga0370494_043540	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.96%
Host-Associated	Host-Associated	6.25%
Engineered	Engineered	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	16.96%
Plants	Host-Associated → Plants	5.36%
Wastewater	Engineered → Wastewater	1.79%
Arthropoda	Host-Associated → Arthropoda	0.89%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	50.00%
Soil	Environmental → Terrestrial → Soil	25.00%
Freshwater	Environmental → Aquatic → Freshwater	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.68%
Marine	Environmental → Aquatic → Marine	1.79%
Sediment	Environmental → Aquatic → Sediment	0.89%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.89%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.68%
Loam	Environmental → Terrestrial → Soil → Loam	1.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Coastal	Environmental → Aquatic → Marine → Coastal	0.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	50.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.46%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	31.25%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.25%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.46%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.79%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.89%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010429	AD_USRAca	Engineered	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023254	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T75	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025990	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028648	Activated sludge microbial communities from bioreactor in Nijmegen, Gelderland, Netherland - NOB reactor	Engineered	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028774	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_3	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029998	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300032272	Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrow	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102669372	3300001356	Peatlands Soil	EQRRRYAVALAEELQQYERPMPVMDDYDLLLANTTGGVQ*
JGI12627J18819_103837951	3300001867	Forest Soil	QHAVALAEELLQFERPMPVMDNYDLLLANTTGAIH*
Ga0070733_110858352	3300005541	Surface Soil	RRRSAIALAEELTEFERPMPVMDEYDLLLNDTAGGIQ*
Ga0068859_1005224171	3300005617	Switchgrass Rhizosphere	DGEQRRQYAIALAEELSAFERPMPEMHEYDLLLSNPVGGVQ*
Ga0068864_1010479962	3300005618	Switchgrass Rhizosphere	RQYAIALAEELSAFERPMPEMHEYDLLLSNPVGGVQ*
Ga0079215_104529701	3300006894	Agricultural Soil	PEQRRQYAIALAEELAEFERPMPVMDDYDLLLTDPTGGIQ*
Ga0066709_1038094232	3300009137	Grasslands Soil	RQYAITRAEELQQFERPMPTLAEYDLLLANGKGGIQ*
Ga0116214_14474532	3300009520	Peatlands Soil	PEQRRRYAVALAEELQQYERPMPVMDDYDLLLANTTGGVQ*
Ga0116107_12022442	3300009548	Peatland	LHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLTSATGAIQ*
Ga0116125_11776882	3300009628	Peatland	AVLHLLRMPDPEQRHQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ*
Ga0116113_11889442	3300009638	Peatland	MHLLRMPDPEQRRQHAVALAEELLQFELPMPVMDNYDLLLANTTGAIH*
Ga0116121_11088551	3300009644	Peatland	QHALALAEELLQFERPMPVMDNYDLLLANATGGIH*
Ga0123356_124856702	3300010049	Termite Gut	LHLLRMPDAEQRRQLAVALAEELLQFERPMPVMDNYDLLLANPKGAIQ*
Ga0126378_114704652	3300010361	Tropical Forest Soil	PEERRRHAIALTEELAEFERPMPVMDEYDLLLNDTPGGIQ*
Ga0126377_130249561	3300010362	Tropical Forest Soil	RRRYAVALAAELVQFERPMPAMDEYDQLLSQAPGGIQ*
Ga0136449_1010415772	3300010379	Peatlands Soil	RRYALDLADELVQFERPMPVMDDYDLLLADATGGIQ*
Ga0116241_112757271	3300010429	Anaerobic Digestor Sludge	VQRQQYALALAEELAQFERPAPGVDEYDLLLADAAGGLQ*
Ga0137363_105359302	3300012202	Vadose Zone Soil	MPDQEERRCYAIALAKELAEFERPMPAMDEYDLLLKDTPGGIQ*
Ga0137459_12342892	3300012228	Soil	LHMPDAEQRRQYAIALAEELQEYERPMPTLTEYDLLLADGEGGIRS*
Ga0182014_101886391	3300014491	Bog	AVALAEELQQYERPMPVMDNYDLLLADNTTGAIQ*
Ga0182012_105311301	3300014499	Bog	HAVALAEELLQFERPMPVMDNYDLLLANTTGAIQ*
Ga0182024_120545701	3300014501	Permafrost	MHLLRMPDPEQRRQYAVALAEELLQFERPMPVMDNYDLLLANTTRAIQ*
Ga0182024_126262131	3300014501	Permafrost	LHLLRMPDPEQRHQYAVALAEELLPFERPMPVMDEYDLLLANTTGGIQ*
Ga0181522_103996211	3300014657	Bog	MPDPEERRCYAIALAEELAEFERPMPVMDEYDLLLKDTPGGIQ*
Ga0181522_105363262	3300014657	Bog	LHILHMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ*
Ga0181519_104557752	3300014658	Bog	QYAVALAEELQQYERPMPVMDNYDLLLAANATGAIQ*
Ga0182027_106789793	3300014839	Fen	LRMPDPEQRRQYAVSLAEELQQYERPMPVMDNYDLLLAANTTGAIQ*
Ga0181520_109000842	3300017988	Bog	QQRQQYALALAEELAQFERPMPVMDDYDLLLAGTRGGIQ
Ga0187891_11613352	3300017996	Peatland	RRRYALALAEDLIQFERPMPVMDEYDLLLQDTPGGIQ
Ga0187884_102740861	3300018009	Peatland	DPEQRRQYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ
Ga0187863_100999621	3300018034	Peatland	MPDPEQRRQYAVSLAEELQQYERPMPVMDNYDLLLAANTTGAIQ
Ga0187863_102950541	3300018034	Peatland	QYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ
Ga0187863_108243982	3300018034	Peatland	PEQRRQYAVALADELLQFERPMPVMDNYDLLLANTTGAIH
Ga0187883_105973401	3300018037	Peatland	EQRRQYALTLAEELAQFERPMPVMDDYDLLLTGTRGGIQ
Ga0187887_103452471	3300018043	Peatland	RQYAVSLAEELQQYERPMPVMDNYDLLLAANTTGAIQ
Ga0190269_117224971	3300018465	Soil	RQSAIALAEELCEFERPMPTMQEYDLLLSGAGGVQ
Ga0193726_12482871	3300020021	Soil	PEERRRYAIALAEELAEFERPMPVMDEYDLLLNNTPGGIQ
Ga0210362_12915601	3300021329	Estuarine	MPDPEERRRHAVALADELAEYERPMPVMDDYDLLLADTPGGIQ
Ga0210394_104451242	3300021420	Soil	HILYMPDPEQRRQYALDLADELAQFERPMPVMDDYDLLLTDTMGGIQ
Ga0210398_104215513	3300021477	Soil	RQYDVALAEPLLQYERPMPVMDHYNLLLTTTGAIQ
Ga0224548_10321531	3300022518	Soil	DPEQRRRYALDLADELAQFERPMPVMDDYDLLLADATGGIQ
Ga0224526_10661762	3300022872	Soil	LHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0224559_10745231	3300023091	Soil	PEQRRQYAVALAEELQQYERPMPVMDNYDLLLVASTTEAIQ
Ga0224524_10166702	3300023254	Soil	PEQRRQYAVTLAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0224522_10742991	3300024240	Soil	VLHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLAANTTGAIQ
Ga0208690_10112063	3300025434	Peatland	AAVLHLLRMPDPEQRRQYAVSLAEELQQYERPMPVMDNYDLLLAANTTGAIQ
Ga0207671_111430611	3300025914	Corn Rhizosphere	ERGRYAIALAEELAGFERPMPVMDEYDLLLNERPGGIQ
Ga0207662_102145074	3300025918	Switchgrass Rhizosphere	AMNPFDAIALEEELAQFERPMPEMDEYDLLLGGIQ
Ga0207679_110922261	3300025945	Corn Rhizosphere	GRYAIALAEELAGFERPMPVMDEYDLLLNERLGGIQ
Ga0208527_10267722	3300025990	Rice Paddy Soil	PEQRRQHAVALAEELLQFERPMPAMDNYDLLLANTTGAIH
Ga0207676_102793111	3300026095	Switchgrass Rhizosphere	MSRQYAIALAEELSAFERPMPEMHEYDLLLSNPVGGVQ
Ga0255348_10352603	3300028268	Soil	HLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0268266_112358452	3300028379	Switchgrass Rhizosphere	TEGDPEQRRQYAVALAEELAEFERPMPVMDEYDLLLGDTPGGIQ
Ga0302144_103081631	3300028560	Bog	DPEQRRQHAVALAEELLQFERPMPVMDNYDLLLDNTTGAIH
Ga0302153_100660651	3300028574	Bog	RQYAVALAEELQQYERPMPVMDNYDLLLVNPTGVIQ
Ga0268299_10988911	3300028648	Activated Sludge	ILHMPHAEQRQGHAIALAEELREFERPMPVMNDYDLLLGGATGGLR
Ga0302267_103390592	3300028745	Bog	PDPEQRRQHAVALAEELRQFERPMPVMDNYDLLLANTTGAIH
Ga0302198_102410121	3300028765	Bog	RQHAVALAEELRQFERPMPVMDNYDLLLANTTGAIH
Ga0302208_100856752	3300028774	Fen	RQHAVALAEELLQFERPMPVMDNYDLLLANTTGAIH
Ga0302231_102344482	3300028775	Palsa	MHLLRMPDPEQRRQCAVALAEELQQYERPMPVMDNYDLLLTNTTGAIQ
Ga0302189_102275701	3300028788	Bog	SAAVLHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0302227_101254152	3300028795	Palsa	RRQHAVALAEELMQFERPMPVMDNYDLLLANTTEAIH
Ga0302222_101489142	3300028798	Palsa	EERRRYAIALAEELAEFERPMPVMDEYDLLLKDTPGGIQ
Ga0302268_11164861	3300028854	Bog	HLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ
Ga0302278_102203421	3300028866	Bog	RMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0302197_101730332	3300028873	Bog	DAAAVMHLLRMPDPEQRHQYAVALADELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0302197_101824102	3300028873	Bog	QRRRYAIALAEELREFERPMPTMAEYDLLLADGNGGIQ
Ga0302197_102690372	3300028873	Bog	PDAEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTAGAIQ
Ga0302197_104538191	3300028873	Bog	MHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ
Ga0302155_102758872	3300028874	Bog	QYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0302155_104151221	3300028874	Bog	LHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLVASTTEAIQ
Ga0302200_101372161	3300028909	Bog	PEQRRQYAVALAEELLQFERPMPVMDNYDLLLANTKGAIQ
Ga0302200_101570241	3300028909	Bog	EQRRQHAVALAEELLQFERPMPVMDNYDLLLANTTGAIH
Ga0311327_108737002	3300029883	Bog	DPEQRRQHAVALAEELLQFERPMPVMDNYDLLLANTTGAIH
Ga0311329_105179122	3300029907	Bog	PDPEQRRQYAVALAEELLQFERPMPVMDNYDLLLANTKGAIQ
Ga0311358_101352941	3300029915	Bog	RRQYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ
Ga0302141_10503213	3300029919	Bog	PEQRRQYAVALAEELLQFERPMPVMDNYDLLLTSTTGAIQ
Ga0311363_106773592	3300029922	Fen	DPEQRRQYAVALAEELLQFERPMPVMDNYDLLLTSTTGAIQ
Ga0311340_107075671	3300029943	Palsa	PEQRRQCAVALAEELQQYERPMPVMDNYDLLLTNTTGAIQ
Ga0311343_104738552	3300029953	Bog	RMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLATNTTGAIQ
Ga0302150_100930013	3300029956	Bog	RMPDPEQRRQYAVALAEELLQFERPMPVMDNYDLLLANTTRAIQ
Ga0302150_101069611	3300029956	Bog	PEQRRQHAVALAEELQQFERPMPAMDNYDLLLDNITGVIQ
Ga0302188_101573531	3300029986	Bog	YAVSLAEELQQYERPMPVMDNYDLLLAASTTEAIQ
Ga0302188_102451562	3300029986	Bog	EQRHQYAVALAEELRQFERPMPVMDDYDLLLTNTTGAIQ
Ga0302188_103871712	3300029986	Bog	RQHAVALAEELQQFERPMPVMDNYDLLLANTTGAIQ
Ga0302271_101784152	3300029998	Bog	PEQRRQHEVALAEELLQFERPMPVMDNYDLLLANTTGAIH
Ga0302195_104116782	3300030051	Bog	QYAVALAEELLQFERPMPVMDNYDLLLANTKGAIQ
Ga0302179_105499502	3300030058	Palsa	QYAVALAEELLQFERPMPVMDNYDLLLANTTRAIQ
Ga0311353_104329121	3300030399	Palsa	RMPDPEQRRQHAVALAEELQQYERPMPVMDNYDLLLTNTTGAIQ
Ga0311370_104067963	3300030503	Palsa	DPEQRRQHAVALAKELMEFERPMPVMDEYDLLLTAPTGGIQ
Ga0302192_101561743	3300030507	Bog	QYAVALAEELQQYERPMPVMDNYDLLLVASTTEAIQ
Ga0302192_102014591	3300030507	Bog	AVMHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ
Ga0302185_101723252	3300030508	Bog	RRQYAVSLAEELQQYERPMPVMDNYDLLLAASTTEAIQ
Ga0311345_105268992	3300030688	Bog	AAVLHLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0311345_105465481	3300030688	Bog	HLLRMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTAGAIQ
Ga0302310_103813552	3300030737	Palsa	VLHILHMPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLTSTTGAIQ
Ga0311335_113175211	3300030838	Fen	EKRRQYALDLADELAQFERPMPVMDDYDLLLTEPMGGIQ
Ga0311366_104532043	3300030943	Fen	PDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLAANATGAIQ
Ga0311366_104692231	3300030943	Fen	RQRYAIALAEELAQFERPMPVMDDYDLLLSDGAGGIQ
Ga0170834_1021649603	3300031057	Forest Soil	SYAIALAEELAAFERPMPVMDEYDLLLKGTPGGVQ
Ga0302325_123600801	3300031234	Palsa	KPVHLLRTPDPEQRRQHAVALAEELLQFERPMPVMNNYDLFLANTTGAIH
Ga0302324_1017115553	3300031236	Palsa	RRHALKLAEELKAFERPMPVMDEYDQLLSDGGAIK
Ga0302187_105088641	3300031259	Bog	HLLRTPDPEQRRQRAVALAEELQQFERPMPVMDNYDLLLVNTTGAIQ
Ga0302140_111963572	3300031261	Bog	HQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ
Ga0302320_110133632	3300031524	Bog	QRRQYAVALAEELQQYERPMPVMDNYDLLLVNTTGAIQ
Ga0310686_1007098151	3300031708	Soil	QRRQYALALAEELVQFERPMPVMDEYDLLLSDTRRDIQ
Ga0310686_1165839781	3300031708	Soil	RQYAMSLAEELAQFERPMPVMDDYDLLLTGPAGGIQ
Ga0318544_100760281	3300031880	Soil	PEQRRQYAVALAEELLQFERPMPVMDNYDLLLANPKGAIQ
Ga0316189_110803272	3300032272	Worm Burrow	ILRMPDAEQRRQYAIALAEELKQFERPLPVMDDYDLLLADPAGGVQ
Ga0335079_122131332	3300032783	Soil	QQRRQQAMALAQELVQFERPMPVMDEYDLLLSDTQGDIQ
Ga0335078_107669853	3300032805	Soil	HMPDADERRRYAIALEAELAQFERPMPAMEEYDLLLSETPGGIQ
Ga0370494_043540_13_144	3300034130	Untreated Peat Soil	MPDPEQRRQYAVALAEELQQYERPMPVMDNYDLLLANTTGAIQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083805

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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