Metagenome / Metatranscriptome Family F083790

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083790
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	89 residues
Representative Sequence	VYERLDHDDVAADYLLLLRRGSVMRRLALKEHGAWRQAIRAKARADELRIRTWSRDGAPATVWATLPDWSLTREERERLHQRLSWQRED
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.82 %
% of genes near scaffold ends (potentially truncated)	25.89 %
% of genes from short scaffolds (< 2000 bps)	90.18 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.607 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (8.929 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.071 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.32% β-sheet: 12.82% Coil/Unstructured: 47.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
d.68.1.1: Translation initiation factor IF3, C-terminal domain	d1tiga_	1tig	0.58992
b.82.2.15: proly-4-hydroxylase (P4H, PHD) like	d6qgva_	6qgv	0.58192
d.68.6.1: DNA-binding protein AlbA	d2bkyx_	2bky	0.58035
b.82.2.5: TauD/TfdA-like	d3n6wa2	3n6w	0.5749
d.58.32.0: automated matches	d5fxda2	5fxd	0.5702

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07676	PD40	8.93
PF00005	ABC_tran	3.57
PF01740	STAS	2.68
PF03176	MMPL	2.68
PF05343	Peptidase_M42	2.68
PF01699	Na_Ca_ex	2.68
PF14224	DUF4331	2.68
PF03600	CitMHS	1.79
PF13382	Adenine_deam_C	1.79
PF08031	BBE	1.79
PF13466	STAS_2	1.79
PF02036	SCP2	1.79
PF00587	tRNA-synt_2b	0.89
PF00814	TsaD	0.89
PF10604	Polyketide_cyc2	0.89
PF01863	YgjP-like	0.89
PF07690	MFS_1	0.89
PF14026	DUF4242	0.89
PF13673	Acetyltransf_10	0.89
PF13289	SIR2_2	0.89
PF01161	PBP	0.89
PF00563	EAL	0.89
PF13090	PP_kinase_C	0.89
PF09900	DUF2127	0.89
PF13620	CarboxypepD_reg	0.89
PF02446	Glyco_hydro_77	0.89
PF13561	adh_short_C2	0.89
PF00582	Usp	0.89
PF00072	Response_reg	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	2.68
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	2.68
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	2.68
COG1362	Aspartyl aminopeptidase	Amino acid transport and metabolism [E]	2.68
COG1363	Putative aminopeptidase FrvX	Carbohydrate transport and metabolism [G]	2.68
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	2.68
COG2195	Di- or tripeptidase	Amino acid transport and metabolism [E]	2.68
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.79
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.89
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.89
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.89
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.89
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.89
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.89
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.89
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	0.89
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.61 %
Unclassified	root	N/A	38.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.61 %
Unclassified	root	N/A	38.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.61 %
Unclassified	root	N/A	38.39 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.86 %
Unclassified	root	N/A	38.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.75 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.68 %
unclassified Firmicutes sensu stricto	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto	1.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.79 %
Firmicutes bacterium 13_1_40CM_3_65_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium 13_1_40CM_3_65_11	1.79 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.89 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.89 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.96 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.79 %
Firmicutes bacterium 13_1_40CM_3_65_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium 13_1_40CM_3_65_11	1.79 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.89 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.89 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.89 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.96 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	1.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.79 %
Firmicutes bacterium 13_1_40CM_3_65_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium 13_1_40CM_3_65_11	1.79 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.89 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	0.89 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.89 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.96 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.79 %
Firmicutes bacterium 13_1_40CM_3_65_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium 13_1_40CM_3_65_11	1.79 %
unclassified Jatrophihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans	0.89 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.89 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.89 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.96 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.79 %
Firmicutes bacterium 13_1_40CM_3_65_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium 13_1_40CM_3_65_11	1.79 %
Jatrophihabitans sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp.	0.89 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.89 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.89 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725000\|GPWRP_F5MPXY302ILSSZ	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
2140918007\|ConsensusfromContig110676	All Organisms → cellular organisms → Bacteria → Terrabacteria group	644	Open in IMG/M
2170459003\|FZ032L002JDN9A	Not Available	504	Open in IMG/M
2170459022\|GZEQPF102G7HWT	Not Available	526	Open in IMG/M
3300003993\|Ga0055468_10062972	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300004092\|Ga0062389_104036131	Not Available	551	Open in IMG/M
3300004782\|Ga0062382_10074849	Not Available	1306	Open in IMG/M
3300005093\|Ga0062594_101407167	Not Available	708	Open in IMG/M
3300005183\|Ga0068993_10086786	Not Available	981	Open in IMG/M
3300005329\|Ga0070683_100154812	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300005332\|Ga0066388_101289952	Not Available	1258	Open in IMG/M
3300005332\|Ga0066388_102447872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300005338\|Ga0068868_101102957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300005435\|Ga0070714_100536251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1119	Open in IMG/M
3300005524\|Ga0070737_10000534	All Organisms → cellular organisms → Bacteria	76548	Open in IMG/M
3300005526\|Ga0073909_10573814	Not Available	554	Open in IMG/M
3300005533\|Ga0070734_10453414	Not Available	731	Open in IMG/M
3300005533\|Ga0070734_10877768	Not Available	508	Open in IMG/M
3300005538\|Ga0070731_10424009	Not Available	885	Open in IMG/M
3300005563\|Ga0068855_100004113	All Organisms → cellular organisms → Bacteria	17741	Open in IMG/M
3300005616\|Ga0068852_101213776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300005713\|Ga0066905_101219811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300005764\|Ga0066903_101327736	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300005764\|Ga0066903_101451940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1292	Open in IMG/M
3300005764\|Ga0066903_102617894	Not Available	978	Open in IMG/M
3300005764\|Ga0066903_102978880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300005764\|Ga0066903_103189416	Not Available	887	Open in IMG/M
3300005764\|Ga0066903_104306008	All Organisms → cellular organisms → Bacteria → Terrabacteria group	761	Open in IMG/M
3300005764\|Ga0066903_106462540	Not Available	611	Open in IMG/M
3300006954\|Ga0079219_11246725	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300009012\|Ga0066710_104879078	Not Available	502	Open in IMG/M
3300009038\|Ga0099829_11436383	Not Available	570	Open in IMG/M
3300009093\|Ga0105240_11400507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300009156\|Ga0111538_10283677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2096	Open in IMG/M
3300009176\|Ga0105242_11921359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300009177\|Ga0105248_11316783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300010039\|Ga0126309_10438578	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300010371\|Ga0134125_11680763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300010376\|Ga0126381_101488830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300010376\|Ga0126381_103330197	Not Available	633	Open in IMG/M
3300010379\|Ga0136449_102919571	Not Available	670	Open in IMG/M
3300010379\|Ga0136449_102978817	Not Available	662	Open in IMG/M
3300010880\|Ga0126350_10883052	Not Available	557	Open in IMG/M
3300012096\|Ga0137389_10158071	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300012189\|Ga0137388_10316492	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300012206\|Ga0137380_10243806	Not Available	1621	Open in IMG/M
3300012361\|Ga0137360_10969863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	733	Open in IMG/M
3300012362\|Ga0137361_10475823	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300012582\|Ga0137358_10407255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300012917\|Ga0137395_10311885	Not Available	1116	Open in IMG/M
3300012917\|Ga0137395_10595003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300013105\|Ga0157369_10596907	Not Available	1140	Open in IMG/M
3300013308\|Ga0157375_11333326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	844	Open in IMG/M
3300013766\|Ga0120181_1104549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium 13_1_40CM_3_65_11	619	Open in IMG/M
3300014169\|Ga0181531_10790290	Not Available	592	Open in IMG/M
3300014254\|Ga0075312_1050325	Not Available	792	Open in IMG/M
3300014265\|Ga0075314_1102182	Not Available	621	Open in IMG/M
3300014302\|Ga0075310_1019267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1235	Open in IMG/M
3300014307\|Ga0075304_1179403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300014501\|Ga0182024_10916795	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300014657\|Ga0181522_10273328	Not Available	1001	Open in IMG/M
3300014658\|Ga0181519_10381764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300015371\|Ga0132258_11107476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	2002	Open in IMG/M
3300017937\|Ga0187809_10117261	Not Available	903	Open in IMG/M
3300017944\|Ga0187786_10306313	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300017965\|Ga0190266_10107244	Not Available	1163	Open in IMG/M
3300017965\|Ga0190266_10431026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300017973\|Ga0187780_10315226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
3300018032\|Ga0187788_10404208	Not Available	574	Open in IMG/M
3300018043\|Ga0187887_10332540	Not Available	897	Open in IMG/M
3300018085\|Ga0187772_10389428	Not Available	969	Open in IMG/M
3300018481\|Ga0190271_12352102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300021344\|Ga0193719_10004104	All Organisms → cellular organisms → Bacteria	5922	Open in IMG/M
3300021432\|Ga0210384_10290122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300021432\|Ga0210384_11563517	Not Available	565	Open in IMG/M
3300021519\|Ga0194048_10000022	All Organisms → cellular organisms → Bacteria	67198	Open in IMG/M
3300025324\|Ga0209640_10173134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1842	Open in IMG/M
3300025796\|Ga0210113_1123197	Not Available	505	Open in IMG/M
3300025913\|Ga0207695_10947103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium 13_1_40CM_3_65_11	741	Open in IMG/M
3300025927\|Ga0207687_10690021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300025929\|Ga0207664_10233785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1598	Open in IMG/M
3300025933\|Ga0207706_11557812	Not Available	537	Open in IMG/M
3300025941\|Ga0207711_10850990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300026142\|Ga0207698_11081594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300027706\|Ga0209581_1001780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23426	Open in IMG/M
3300027773\|Ga0209810_1000668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	67763	Open in IMG/M
3300027826\|Ga0209060_10300488	Not Available	733	Open in IMG/M
3300027840\|Ga0209683_10087419	Not Available	1400	Open in IMG/M
3300027867\|Ga0209167_10711761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300027905\|Ga0209415_10287736	Not Available	1432	Open in IMG/M
3300028573\|Ga0265334_10089832	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300028800\|Ga0265338_10158225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1752	Open in IMG/M
3300031229\|Ga0299913_10565362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300031234\|Ga0302325_10733580	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1413	Open in IMG/M
3300031240\|Ga0265320_10107956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1277	Open in IMG/M
3300031548\|Ga0307408_101594268	Not Available	620	Open in IMG/M
3300031670\|Ga0307374_10019371	All Organisms → cellular organisms → Bacteria	8754	Open in IMG/M
3300031672\|Ga0307373_10271674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1111	Open in IMG/M
3300031720\|Ga0307469_12062637	Not Available	554	Open in IMG/M
3300031736\|Ga0318501_10603080	Not Available	603	Open in IMG/M
3300031890\|Ga0306925_11772011	Not Available	593	Open in IMG/M
3300031954\|Ga0306926_12313379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp.	595	Open in IMG/M
3300031962\|Ga0307479_10201745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1959	Open in IMG/M
3300031997\|Ga0315278_10722057	Not Available	1012	Open in IMG/M
3300032008\|Ga0318562_10239243	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300032180\|Ga0307471_101429212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	851	Open in IMG/M
3300032205\|Ga0307472_101065432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	762	Open in IMG/M
3300032770\|Ga0335085_10748265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300032805\|Ga0335078_10000015	All Organisms → cellular organisms → Bacteria	339243	Open in IMG/M
3300032892\|Ga0335081_11188441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300032898\|Ga0335072_10540741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300034195\|Ga0370501_0317029	All Organisms → cellular organisms → Bacteria → Terrabacteria group	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.04%
Host-Associated	Host-Associated	16.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	16.96%
Aquatic	Environmental → Aquatic	11.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Freshwater	Environmental → Aquatic → Freshwater	8.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.46%
Marine	Environmental → Aquatic → Marine	2.68%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.68%
Lake	Environmental → Aquatic → Freshwater → Lake	1.79%
Clay	Environmental → Terrestrial → Soil → Clay	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.79%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.04%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.68%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725000	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459022	Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014307	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWRP_02686270	2067725000	Soil	NEDYRLLLRRGSVMRRLALAEHEAWRRAIRSKARADELRIRTWSRGGRPATVWATLPDWSLTGDERERLRRRLAWLRED
A_all_C_02269520	2140918007	Soil	TPPWHDRSLAMYERFDDAELTEDYLLLLRRGSVMRRLAPAQHRGWRQAIRTKAHADELRVRTWSRDGQPATVWAVLPDWSLTHEEREELLRKLAWKQED
E4A_00818180	2170459003	Grass Soil	YLLLLRRGSVMRRLATAQHRGWRQAIRVKAHADELRVRTWSRDGQPATVWAVLPDWSLTSDEREELERKLAWKQED
FA2_04792000	2170459022	Grass Soil	MYEGFDAADVAEDYRQLLRRGSVLRRLALARHTEWRHAIRAAARADEHRVRTWSRAGHPAEVWAVLRDWSLTREEQERLQRRLGWLRED
Ga0055468_100629721	3300003993	Natural And Restored Wetlands	VSNTETRDAIPTAVMLPRYRRQGARNLRREAYAPAEVYERFEDADVAEDYLALLRRGSVMRRLALGQHDSWRRALRGRARADELRVRTWSRPGRPATVWAVLPDWSLTREERERLLRRLSWQRED*
Ga0062389_1040361311	3300004092	Bog Forest Soil	VYETFDDADVTDDYRRLLRRGSVMRRLAPAAHPAWRRAIGTAAAADRHRIRTWSRGGRPAEVWAVLPDWSLTSDEQRRLQRRLHWLRED*
Ga0062382_100748492	3300004782	Wetland Sediment	MYGELDDRDLAEDYLALLRRGSVMRRLALGVHPAWRRAIRAKAGRDALRVRTWSRDGVPPTVWAVLPNWSLTPEEREKLARLLSWQQRDD*
Ga0062594_1014071671	3300005093	Soil	VARDLRASATGPKIAAVYEHFDDADLARDYHELLRRGSVMRRLAPAQHPAWRRAIRTKARSDELKVRTWSRAGRPATVWAVLPDWTLTRAERERLTQRLAWLRES*
Ga0068993_100867862	3300005183	Natural And Restored Wetlands	MYGRFDDDDLAHDYLELLRRGSVTRRLALEEHPAWRRAIRAMARTDELTVRTWSRDGAPATVWAVLPDWSLTRAEYERLVQRLAWQRED*
Ga0070683_1001548121	3300005329	Corn Rhizosphere	LLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDELRIRTWSRDGQPATVWAVLPDWSLTRDEHEALQRKLAWKQED*
Ga0066388_1012899522	3300005332	Tropical Forest Soil	VYERLDHDDVAADYLLLLRRGSVMRRLALKEHGAWRRAIRAKARADELRIRTWSRAGAPATVWATLPDWSLTREERERLRQRLSWQRED*
Ga0066388_1024478722	3300005332	Tropical Forest Soil	VYARFDEADVARDYLELLRRGSVMRRLAPAQHAAWRRAIRATARTDELRIRTWSREGSPATVWAVLPDWTLTRAERDALVQRLAWQREG*
Ga0068868_1011029572	3300005338	Miscanthus Rhizosphere	MYGGFDDGDIADDYRMLLRRGSVMRRLVSTEHAAWRKAIRERARSDELRIRTWSRGGTPATVWATLPDWSLTRDERERLRQRLAWQRDGED*
Ga0070714_1005362511	3300005435	Agricultural Soil	HDPSLAMYERFDDDDLAQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDALRIRTWSRDGQPATVWAVLPDWSLTRDEHEELQRKLAWKQED*
Ga0070737_1000053414	3300005524	Surface Soil	VYDGFDEEDVAGDYLALLRRGATMRRLAPAHHPAWRRVIRAKARADGLRVRTWSRDGHPATVWAVLPDWTLTRAERESLLRRLAWLRED*
Ga0073909_105738142	3300005526	Surface Soil	MYQAFDEQDVAQDYLQLLQRGSVVRRLVLAEHGAWRRAIRAKAHTDELRIRTWSRDASPATVWAVLRDWTLT
Ga0070734_104534142	3300005533	Surface Soil	VYDTFDDGDIADDYRRLLRRGSVMRLLAPARHADWRKAIRAAAAADRHRIRTWSRGGRPAEVWATLPDWTLTREEQERLNRRLSWLRED*
Ga0070734_108777681	3300005533	Surface Soil	ADVTEDYRMLLRRGSVMRRLAPAQHSAWRKAIRGAARSDEHRIRTWSRPGRPAEVWAVLPDWTLTRDEQDRLRRRLDWVRED*
Ga0070731_104240091	3300005538	Surface Soil	VDDDVLARDYLRLLRRGSVLRKLAPAQHGAWRQALRARAAADSLRIRTGSRAGAAEVWAVLPDWSLTREDRERLAQRLEWLRED*
Ga0068855_10000411313	3300005563	Corn Rhizosphere	MYERFDDDDLAQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDALRIRTWSRDGQPATVWAVLPDWSLTRDEHEELQRKLAWKQED*
Ga0068852_1012137763	3300005616	Corn Rhizosphere	MYERFDDDDLAQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDELRIRTWSRDGQPATVWAVLPDWSLTRDEHEALQRKLAWKQED*
Ga0066905_1012198112	3300005713	Tropical Forest Soil	DALRSAPLGSRDVYGGFDETDIGDDYRMLLRRGSVMRRLALTEHAAWRRAIRHRAREDELRIRTWSRPGAPATVWATLPDWSLTRDERERLAQRLSWQRED*
Ga0066903_1013277364	3300005764	Tropical Forest Soil	VYARFDEADVARDYLELLRRGSVMRRLAPAQHPAWRRAIRATARTDELRVRTWSREGSPATVWAVLPDWTLTRAERDALKQRL
Ga0066903_1014519404	3300005764	Tropical Forest Soil	MYRRFEDADVAGDYLHLLRRGSVMRRLALSEHSAWRRAIRSRARSDELAVRTWSRGGKPATVWAVLPAWSLTPAERELLVQRLAWLREA*
Ga0066903_1026178942	3300005764	Tropical Forest Soil	VYQRFDDGDVADDYLHLLRRGSVMRRLALAEHSAWRRAIRSRARSDELAIRTWSRAGRPATVWAVLPDWSLTPAEREQLARRLAWLHES*
Ga0066903_1029788801	3300005764	Tropical Forest Soil	VYDRFDERDIGDDYRMLLRRGSVMRRLALAEHGAWRQAIRAIAGADELRIRTWSRGGAPATVWATLPDWSLTREERERLRQRLAWQRED*
Ga0066903_1031894162	3300005764	Tropical Forest Soil	VYRRFDDGDVADDYLQLLRRGSVMRRLALSEHSGWRRAIRSRARSDELAIRTWSRAGRPATVWAVLPDWSLTRSEREQLARRLAWIPES*
Ga0066903_1043060082	3300005764	Tropical Forest Soil	VYDAFDTEDVAEDYRMLLRRGSVMRRLAPSEHSAWRRAIRAAARADEHRIRTWSRAGRPAEVWAVLRDWSLT
Ga0066903_1064625401	3300005764	Tropical Forest Soil	VYERFDEDDVGQDYLSLLRRGSVMRRLALTQHGAWRQAIRAKARSDELRIRTWSRGGAPATVWATLPDWSLTEDERRLLHQRLAWRDD*
Ga0079219_112467252	3300006954	Agricultural Soil	VYARFDDADVARDYLELLRRGSVMRRLAPEQHPAWRRAIRTTARNDELRIRTWSRAGRPATVWAVLPDWTLTQAERDSLVQRLAWQREG*
Ga0066710_1048790782	3300009012	Grasslands Soil	VYERFEDEEAALDYVHLLRRGSVMRRLALSEHAAWQRAMRTRARTDELRIRTWSRDGRPATVWAVLPDWTLTSGEREELHRRLAWQRED
Ga0099829_114363831	3300009038	Vadose Zone Soil	YRLLLRRGSVMRRLAAGEHRSWRQAMRFKAHADELRIRTWSRDGQPATVWAVLRDWSLTHKEREQVLRRLTWQRED*
Ga0105240_114005072	3300009093	Corn Rhizosphere	MYERFDDDDLAQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDELRIRTWSRDGQPATVWAVLPDWSLTRDEHEELQRKLAWKQED*
Ga0111538_102836772	3300009156	Populus Rhizosphere	LAVYAGFDEDDVAEDYRMLLRRGSVMRRLASKEHDGWRKAIRGRARADELRIRTWSRGGAPATVWATLPDWSLTDEERERLQRRLSWLRED*
Ga0105242_119213592	3300009176	Miscanthus Rhizosphere	YGGFDDGDIADDYRMLLRRGSVMRRLVSTEHAAWRKAIRERARSDELRIRTWSRGGTPATVWATLPDWSLTRDERERLRQRLAWQRDGED*
Ga0105248_113167831	3300009177	Switchgrass Rhizosphere	VYTGFDERDIGEDYRMLLRRGSVMRRLALAEHGSWRKAIRTRARADELRIRTWSRGGAPATVWATLPDWSLTSDERARLSQRLAWQRED*
Ga0126309_104385782	3300010039	Serpentine Soil	MYERFDETDVGDDYLALLRRGSVMRRLAPAQHAAWRAAIGAKARTDELRVRTWSRDGKPATVWAVLPDWTLTRDEHERMVRRLSWQRED*
Ga0134125_116807632	3300010371	Terrestrial Soil	LTHEIAAADYRQLLRRGSVTRRLPGRDHEAWKRAVETQARADELRIRTWSRDDPASVWAVLEDWSLTREERERLYQRTTWQRED*
Ga0126381_1014888301	3300010376	Tropical Forest Soil	VYDAFDTEDVAEDYRMLLRRGSVMRRLALSEHAAWRQAIRAAARADEHRVRTWSRPGRPAEVWAVLRGWSLTGDERRRLERRLSWLRED*
Ga0126381_1033301972	3300010376	Tropical Forest Soil	LRPPAYDRTIVGVYAHFDADDVASDYLQLLRRGSVMRRLAPAQHEAWRRAIRASARSDELRIRTWSRGGRPATVWATLPDWSLTREERELLSRRLEWQRES*
Ga0136449_1029195712	3300010379	Peatlands Soil	DYRELLRRGSVMRRLAPSQHAGWRKAIRATAHVDELRVRTWSRGGRPAEVWAVLRDWSLTRDEHERLQRRLAWLRED*
Ga0136449_1029788171	3300010379	Peatlands Soil	VYRSLDEHEVASDYLQLLRRGSVMRRLALAQHALWERAIGARARADMLSVRTWSRAGSPASVWAVLQDWSPTWEERVRLQRRLSWLRED*
Ga0126350_108830522	3300010880	Boreal Forest Soil	MGGYQQFDEQDIAQDYLQLLQRGSVVRRLAVSEHSAWRSAIRAKARTDELKLRTWSRDGRPATVWAVLPDWRLTPEGREHLAERLAWQRED*
Ga0137389_101580712	3300012096	Vadose Zone Soil	LYERFDDADLNEDYRLLLRRGSVMRRLAAGEHRSWRQAMRFKAHADELRIRTWSRDGQPATVWAVLRDWSLTHKEREQVLRRLTWQRED*
Ga0137388_103164922	3300012189	Vadose Zone Soil	TSELYERFDDADLNEDYRLLLRRGSVMRRLAAGEHRSWRQAMRFKAHADELRIRTWSRDGQPATVWAVLRDWSLTHKEREQVLRRLTWQRED*
Ga0137380_102438062	3300012206	Vadose Zone Soil	MYERFDDDDLTEDYLLLLRRGSVMRRLATAEHGAWRRAMRAKARADELRIRSWSRDGRPATVWAVLPAWSLTPDEREKLMRRLAWQREGED*
Ga0137360_109698631	3300012361	Vadose Zone Soil	LYERFDDADLNEDYRLLLRRGSVMRRLAAGEHRSWGQAMRVKAHADELRIRTWSRDGQPATVWAVLPDWSLTHKEREQVLRRLTWQRED*
Ga0137361_104758232	3300012362	Vadose Zone Soil	LYERFDDADLNEDYRLLLRRGSVMRRLAAGEHRNWRQAMRVKAHADELRIRTWSRDGQPATVWAVLPDWSLTHKEREQVLRRLTWQRED*
Ga0137358_104072552	3300012582	Vadose Zone Soil	LYERFDDADLNEDYRLLLRRGSVMRRLAAGEHRSWRQAMRVKAHADELRIRTWSRDDQPATVWAVLPDWSLTHKEREQVLRRLTWQRED*
Ga0137395_103118851	3300012917	Vadose Zone Soil	DRSPAMYEHFDDADLTQDYLLLLRRGSVMRRLAPTQHRGWRQAIRANAQSDEIRVRTWSRNGRPATVWAVLPDWSLTQDEREELQRKLAWKQED*
Ga0137395_105950032	3300012917	Vadose Zone Soil	LYERFDDADLNEDYRLLLRRGSVMRRLAAGEHRSWRKAMRVKAHADELRIRTWSRDGQPATVWAVLPDWSLTHKEREQVLRRLTWQRED*
Ga0157369_105969071	3300013105	Corn Rhizosphere	LLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDELRIRTWSRDGQPATVWAVLPDWSLTRDEHEELQRKLAWKQED*
Ga0157375_113333261	3300013308	Miscanthus Rhizosphere	MYGGFDEGDIGDDYRMLLRRGSVMRRLVATEHAAWRKAIRERARSDELRIRTWSRGGAPATVWATLPDWSLTRDERERLRQRLAWQHDGED*
Ga0120181_11045492	3300013766	Permafrost	EDYLLLLRRGSVMRRLASAQHRDWRQAIRAKAHADEIRVRTWSRDGQPATVWAVLPDWSLTHEEREELLRKLAWKQED*
Ga0181531_107902901	3300014169	Bog	LQASRSRLSAAVYGRFEEHEAVADYRQLLARGSVMRRLALSEHSLWRQAIRARAHIDELRVRTWSRAGSPASVWAVLPDWSLTREEHERLQQRLARLRED*
Ga0075312_10503251	3300014254	Natural And Restored Wetlands	VYERFEDADVAEDYLALLRRGSVMRRLALGQHDSWRRALRGRARADELRVRTWSRPGRPATVWAVLPDWSLTREERERLLRRLSWQRED*
Ga0075314_11021821	3300014265	Natural And Restored Wetlands	VYERFEDADVVEDYLALLRRGSVMRRLALGQHDSWRRALRGRARADELRVRTWSRPGRPATVWAVLPDWSLTREERE
Ga0075310_10192672	3300014302	Natural And Restored Wetlands	VYERFEDADVAEDYLALLRRGSVMRRLALGQHDSWRRALRGRARADELRVRTWSRPGRPATVWAVLPDWSLTREERERLLRRLSWQREA*
Ga0075304_11794032	3300014307	Natural And Restored Wetlands	ADDDDVAHDYLQLLRRGSVVRRLALAEHGAWRRAIRRKARTDELRVRTWSRGGRPATVLAVLPDWSLTRAERELLLQRLAWRDD*
Ga0182024_109167951	3300014501	Permafrost	VYGKLQDDEVAWDYLQLLRRGSVTRKLAVAQHPLWRRGIRAKARGDELRVRTWSREQHPATVWAVLSDWSLNPEERAELQRRVRWLRED*
Ga0181522_102733282	3300014657	Bog	LQASRSRLSAAVYGRFEEHEAVADYRQLLARGSVMRRLALSEHSLWRQAIRARAHIDELRVRTWSRAGSPASVWAVLPDWSLTREEHERLQQRLAWLRED*
Ga0181519_103817641	3300014658	Bog	VYGSFEEQDVVDDYQELLRRGSVTRRLALSQHSLWRQAIRTRARVDELRVRTWSRDGAPATVWAVLQDWSLTREEYERLRQRLAWLRED*
Ga0132258_111074761	3300015371	Arabidopsis Rhizosphere	VYERLDHDDVAADYLLLLRRGSVMRRLALKEHGAWRQAIRAKARADELRIRTWSRDGAPATVWATLPDWSLTREERERLHQRLSWQRED*
Ga0187809_101172612	3300017937	Freshwater Sediment	LRAAWTPPCRRHRSGFRVYDTFDDGDIADDYRRLLRRGSVMRPLAPARHAAWRKAIRAAAAADRHRIRTWSRGGRPAEVWATLPDWSLTRDEQERLHRRLSWLRED
Ga0187786_103063133	3300017944	Tropical Peatland	RRGSVMRRLAPSEHEGWRRAVRAKARADDLRIRTWSRVSVPAEVWAVLPDWSLTREERAKLAERLAWLRED
Ga0190266_101072442	3300017965	Soil	VYGGFHDDDIGQDYLMLLRRGSVMRRLTLKQHGAWRQAIRARAHADELRIRTWSRGGQPATVWATLPDWSLTREEYERLRQRVAWQRDGED
Ga0190266_104310262	3300017965	Soil	MYERFDDDDLAHDYLALLRRGSVQRRLAPKEHSAWRRAMRAKARADELVIRTWSRDGAPATVWAVLTEWTLTRDEREKLLQRLAWQRED
Ga0187780_103152262	3300017973	Tropical Peatland	VYERFDETDVHADYLQLLRRGSVMRRLAQAQHSAWRQAMRAKARADDLRIRTWSRDTTPAEVWAVLPDWSLTRDERERLARRLEWLRED
Ga0187788_104042082	3300018032	Tropical Peatland	VYDRFEDEDVAADYLQLLRRGSVMRRLASSEHEGWRRAVRAKARADDLRIRTWSRRSVPAEVWAVLPDWSLTAEERAKLAQRLAWLRED
Ga0187887_103325401	3300018043	Peatland	VYGRFEEHEAVADYRQLLARGSVMRRLALSEHSLWRQAIRARAHIDELRVRTWSRAGSPASVWAVLPDWSLTREEHERLQQRLAWLRED
Ga0187772_103894282	3300018085	Tropical Peatland	VYGRFDERDVAADYLQLLRRGSVTRRLALPQHPLWRRQIRARARADELRVRTWSRAEAPATVWAVLRDWTLTPAERERLRLRLAWLRED
Ga0190271_123521022	3300018481	Soil	RARLSGRRRLSAVYGGFDNDDIGQDYLMLLRRGSVMRRLALKQHGAWRQAIRARAHADELRIRTWSRGGQPATVWATLPDWSLTREEYEQLRQRIAWQRDGED
Ga0193719_100041043	3300021344	Soil	MYERFDDDDLAQDYLLLLRRGSVLRRLVLSQHRGWRQAIRAKAHSDELRIRTWSRDGQPATVWAVLPDWSLTRDERAELLRRIAWQREGED
Ga0210384_102901223	3300021432	Soil	MYQGIDAADVAEDYRQLLRRGSVMRRLALAQHPVWRRAIRAAARADEHRVRTWSRAGQPAEVWAVLRDWSLTREEREGVRRRLGWLRED
Ga0210384_115635172	3300021432	Soil	MYQGFDAADVAEDYRQLLRRGSVMRRLALAQHTAWRHAIRAAARADEHRVRTWSRARQPAEVWAVLRDWSLTREEQERLQRRLGWLRED
Ga0194048_1000002244	3300021519	Anoxic Zone Freshwater	VYAHLDDEDVAADYLHLLRRGSVTRRLAPSEHLDWRRAIRARARADELRVKTWSRGGDPPTVWAVLRDWSLTRTEHERLRRRIDWWTEETS
Ga0209640_101731342	3300025324	Soil	MYERFDDRDLGHDYQELLRRGSVMRRLALTEHTAWRRAIRAKARTDELRIRTWSREGAPATVWAVLPDWSLTREEREKLLQRLSWQRED
Ga0210113_11231972	3300025796	Natural And Restored Wetlands	VYERFEDADVAEDYLALLRRGSVMRRLALGQHDSWRRALRGRARADELRVRTWSRPGRPATVWAVLPDWSLTREERERLLRRLSWQRED
Ga0207695_109471032	3300025913	Corn Rhizosphere	MYERFDDDDLAQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDELRIRTWSRDGQPATVWAVLPDWSLTRDEHEELQRKLAWKQED
Ga0207687_106900211	3300025927	Miscanthus Rhizosphere	MYGGFDDGDIADDYRMLLRRGSVMRRLVSTEHAAWRKAIRERARSDELRIRTWSRGGTPATVWATLPDWSLTRDERERLRQRLAWQRDGED
Ga0207664_102337853	3300025929	Agricultural Soil	MYERFDDDDLAQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDALRIRTWSRDGQPATVWAVLPDWSLTRDEHEELQRKLAWKQED
Ga0207706_115578122	3300025933	Corn Rhizosphere	VARDLRASATGPKIAAVYEHFDDADLARDYHELLRRGSVMRRLAPAQHPAWRRAIRTKARSDELKVRTWSRAGRPATVWAVLPDWTLTRAERERLTQRLAWLRES
Ga0207711_108509901	3300025941	Switchgrass Rhizosphere	VYTGFDERDIGEDYRMLLRRGSVMRRLALAEHGSWRKAIRTRARADELRIRTWSRGGAPATVWATLPDWSLTSDERARLSQRLAWQRED
Ga0207698_110815942	3300026142	Corn Rhizosphere	MYERFDDDDLAQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAHSDELRIRTWSRDGQPATVWAVLPDWSLTRDEHEALQRKLAWKQED
Ga0209581_10017801	3300027706	Surface Soil	MYDGFDEEDVAGDYLALLRRGATMRRLAPAHHPAWRRAIRAKARADGLRVRTWSRDGHPATVWAVLPDWTLTRAERESLLRRLAWLRED
Ga0209810_100066867	3300027773	Surface Soil	VYDGFDEEDVAGDYLALLRRGATMRRLAPAHHPAWRRVIRAKARADGLRVRTWSRDGHPATVWAVLPDWTLTRAERESLLRRLAWLRED
Ga0209060_103004881	3300027826	Surface Soil	VYDTFDDGDIADDYRRLLRRGSVMRLLAPARHADWRKAIRAAAAADRHRIRTWSRGGRPAEVWATLPDWTLTREEQERLNRRLSWLRED
Ga0209683_100874193	3300027840	Wetland Sediment	MYGELDDRDLAEDYLALLRRGSVMRRLALGVHPAWRRAIRAKAGRDALRVRTWSRDGVPPTVWAVLPNWSLTPEEREKLARLLSWQQRDD
Ga0209167_107117612	3300027867	Surface Soil	VYETFDDADLADDYRRLLRRGSVMRRLAPGQHPAWRRAIRASAAADRHRIRTWSRAGRPAEVWAVLPDWSLTEDERQRLWRRLNWLRED
Ga0209415_102877361	3300027905	Peatlands Soil	VYTGFDEQDVASDYLLLLRRGSVMRRLALDRHPHWELAIRDRAGADELRIRTFSRAGRPATVWAVLEDWSLTREEHERL
Ga0265334_100898321	3300028573	Rhizosphere	VTGERFDEEVAARDYRQLLTRGSVMRRLAPARHAAWRKAIRAAARADELTVRTWSRAGAPEVWAVLQGWSLTPEERRRLAVRLDWLRED
Ga0265338_101582251	3300028800	Rhizosphere	LTATRRRRRNVPSVYEGFREEDVVADYRHLLRRGSVMRRLALSKHADWRKAIRAHARADDLAVRTWSRQGPPGEVWAVLPAWSLTRDEHERLQLRLAWLRED
Ga0299913_105653622	3300031229	Soil	MRDTIPTAVMLPRYRRQGARNLRREAYAPAEVYERFEDADVAEDYLALLRRGSVMRRLAPGQHDAWRRALRGRARADELRVRTWSRPGRPATVWAVLRDWSLTREERERLLRRLSWQRED
Ga0302325_107335802	3300031234	Palsa	VGPYRQFDEQDIAQDYLHLLQRGSVVRRLAVSEHAAWRRAIRAKARTDELKLRTWSRDDRPATVWAVLPDWTLTPEGRKHLAQRLAWQRED
Ga0265320_101079562	3300031240	Rhizosphere	VYGDFGEDDVGADYRHLLRRGSVMRRLAPSKHADWRKAIRAQARADDLAVRTWSRAGPPGEVWAVLPAWSLTSDEHERLQRRLAWLRED
Ga0307408_1015942681	3300031548	Rhizosphere	VYERFDDEDVAADYLQLLRRGSVMRRLAPAAHAAWRRALRRRARSDELRIRTWSRDGRPATVWATLPDWSLTHEERDRLVRRLEWLRED
Ga0307374_100193717	3300031670	Soil	MYQGFDAADVAEDYRQLLRRGSVMRRLALTQHTAWRQAIRVAGRADEHRVRTWSRAGQPSEVWAVLRDWSLTREEQERLQQRLGWLREE
Ga0307373_102716743	3300031672	Soil	PHGIVPVPMYQGFDAADVAEDYRQLLRRGSVMRRLALTQHTAWRQAIRVAGRADEHRVRTWSRAGQPSEVWAVLRDWSLTREEQERLQQRLGWLREE
Ga0307469_120626371	3300031720	Hardwood Forest Soil	MYEHFDDADLAQDYLMLLRRGSVMRRLATAEHRAWRKAIRTKAHADELRIRTWSRDGQPATVWAVLPDWSLTPDERERLRRRIAWQRDGED
Ga0318501_106030801	3300031736	Soil	VREVYETFDDGDISDDYRRLLRRGSVMRRLAVAQHPAWRRAIRAAAAADEHRIRTWSRTGRPAEVWAVLRDWSLTSDEQERLRRRLGWLRED
Ga0306925_117720112	3300031890	Soil	VYAHFDADDVARDYVQLLRRGSVMRRLAPAQHEAWRRAIRASARSDELRIRTWSRGGRPATVWATLPDWSLTREERELLSRRLEWQRES
Ga0306926_123133791	3300031954	Soil	LYEAFDDADVAQDYRMLLRRGSVMRRLAPAQHAAWRRAIRAAARADEHRIRTWSRGGRPAEVWAVLRDWSLTHDERSRLARRLSWLRED
Ga0307479_102017452	3300031962	Hardwood Forest Soil	MYEHFDDADLSQDYLLLLRRGSVMRRLAPTQHRGWRQAIRAKAQSDEIRVRTWSRNGRPATVWAVLPDWSLTQDEREELQRKLDWKQED
Ga0315278_107220572	3300031997	Sediment	MYRHFDEQDVAQDYVQLLRRGSVVRRLVLAEHGAWRRAIRAKAQTDELRVRTWSRDEQPATVWAVLSDWTLTPEGRRLLAERLEWQREG
Ga0318562_102392431	3300032008	Soil	LQLLRRGSVMRRLAPAQHEAWRQAIRASARSDELRIRTWSRGGRPATVWATLPDWSLTREERELLSRRLEWQRES
Ga0307471_1014292122	3300032180	Hardwood Forest Soil	DDADLSEDYLLLLRRGSVMRRLAPAQHRDWRQAIRTKAHADEIRVRTWSRDGQPATVWAVLPDWSLTHEEREALLRRVAWQRDGED
Ga0307472_1010654322	3300032205	Hardwood Forest Soil	VYERFDENDVHADYLQLLRRGSVMRRLAPGQHTAWRKAIRAAVRADDLRIRTYSRETRPAEVWAVLPDWSLTREERERLAQRLEWLRED
Ga0335085_107482654	3300032770	Soil	VYTHFDADDVARDYVELLRRGSVMRRLAPAQHAAWRRAIRASARSDELRIRTWSRGGRPATVWATLPDWSLTREERELLT
Ga0335078_10000015391	3300032805	Soil	VYERFDETDVHADYLQLLRRGSVMRRLAQAQHSAWRHAMRTKARADDLRIRTWSRDTTPAEVWAVLPDWSLTRDERERLARRLEWLRED
Ga0335081_111884412	3300032892	Soil	VYERFDETDVQADYLQLLRRGSVMRRLAQAQHSAWRHAMRTKARADDLRIRTWSRDTTPAEVWAVLPDWSLTRDERERLARRLEWLRED
Ga0335072_105407412	3300032898	Soil	VYDTFDDGDIADDYRRLLRRGSVMRLLAPARHADWRKAIRAAAAADRHRIRTWSRGGRPAEVWATLPDWTLTRDEQERLNRRLSWLRED
Ga0370501_0317029_75_356	3300034195	Untreated Peat Soil	MYERFDDDDLAADYLLLLRRGSVMRRLAPAGHTGWRQAIHAKAHADEIKVRTWSRDGQPATVWAVLPDWSLTRRENENLQNWLAWQQQGDDDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences