Metagenome Family F083762

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F083762
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	57 residues
Representative Sequence	MSAKRIKGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLKATFTYKVSLGVGAMAKK
Number of Associated Samples	60
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.51 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (70.536 % of family members)
Environment Ontology (ENVO)	Unclassified (61.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.536 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.28% β-sheet: 22.09% Coil/Unstructured: 61.63%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01740	STAS	9.82
PF07238	PilZ	8.93
PF00072	Response_reg	6.25
PF13650	Asp_protease_2	3.57
PF01381	HTH_3	2.68
PF00795	CN_hydrolase	1.79
PF13683	rve_3	1.79
PF12844	HTH_19	1.79
PF13083	KH_4	0.89
PF06114	Peptidase_M78	0.89
PF13365	Trypsin_2	0.89
PF07366	SnoaL	0.89
PF12867	DinB_2	0.89
PF07730	HisKA_3	0.89
PF04326	AlbA_2	0.89
PF14534	DUF4440	0.89
PF03852	Vsr	0.89
PF02517	Rce1-like	0.89
PF00664	ABC_membrane	0.89
PF13517	FG-GAP_3	0.89
PF13377	Peripla_BP_3	0.89
PF08388	GIIM	0.89
PF01569	PAP2	0.89
PF08239	SH3_3	0.89
PF02627	CMD	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.89
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.89
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.89
COG3727	G:T-mismatch repair DNA endonuclease Vsr, very short patch repair protein	Replication, recombination and repair [L]	0.89
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.89
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.89
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.89
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.89
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.04 %
Unclassified	root	N/A	41.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.04 %
Unclassified	root	N/A	41.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	41.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.79 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.89 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.79 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.89 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.89 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Halococcaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae	0.89 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
unclassified Gemmataceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae	0.89 %
Halococcus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.79 %
Gemmataceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	0.89 %
Halococcus sediminicola	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus sediminicola	0.89 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10063607	Not Available	942	Open in IMG/M
3300001593\|JGI12635J15846_10105248	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300002906\|JGI25614J43888_10019750	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300002906\|JGI25614J43888_10093880	Not Available	806	Open in IMG/M
3300002914\|JGI25617J43924_10024706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2104	Open in IMG/M
3300002914\|JGI25617J43924_10035534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1788	Open in IMG/M
3300002914\|JGI25617J43924_10053643	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300002917\|JGI25616J43925_10153794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300002917\|JGI25616J43925_10221944	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300004092\|Ga0062389_101697487	Not Available	813	Open in IMG/M
3300007255\|Ga0099791_10591739	Not Available	542	Open in IMG/M
3300007258\|Ga0099793_10299748	Not Available	781	Open in IMG/M
3300007265\|Ga0099794_10050657	Not Available	1998	Open in IMG/M
3300007265\|Ga0099794_10096159	Not Available	1474	Open in IMG/M
3300007265\|Ga0099794_10207976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300007265\|Ga0099794_10458001	Not Available	669	Open in IMG/M
3300007265\|Ga0099794_10477506	Not Available	655	Open in IMG/M
3300007265\|Ga0099794_10663605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	554	Open in IMG/M
3300007788\|Ga0099795_10001278	All Organisms → cellular organisms → Bacteria	5351	Open in IMG/M
3300009038\|Ga0099829_10040704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3382	Open in IMG/M
3300009038\|Ga0099829_10295657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300009088\|Ga0099830_10018424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4491	Open in IMG/M
3300009088\|Ga0099830_10066105	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300009088\|Ga0099830_10218472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1498	Open in IMG/M
3300009088\|Ga0099830_10982766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300009088\|Ga0099830_11456914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300009089\|Ga0099828_10578775	All Organisms → cellular organisms → Bacteria → Acidobacteria	1011	Open in IMG/M
3300009089\|Ga0099828_10904990	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009143\|Ga0099792_10579139	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300009143\|Ga0099792_10969470	Not Available	566	Open in IMG/M
3300010379\|Ga0136449_100428671	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300011269\|Ga0137392_10560287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300011269\|Ga0137392_11100261	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300011269\|Ga0137392_11542230	Not Available	523	Open in IMG/M
3300011270\|Ga0137391_10046945	All Organisms → cellular organisms → Bacteria	3676	Open in IMG/M
3300011270\|Ga0137391_11397146	Not Available	546	Open in IMG/M
3300011271\|Ga0137393_10941263	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300011271\|Ga0137393_11064891	Not Available	687	Open in IMG/M
3300012096\|Ga0137389_10341063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300012096\|Ga0137389_10369933	Not Available	1222	Open in IMG/M
3300012096\|Ga0137389_10505711	Not Available	1036	Open in IMG/M
3300012096\|Ga0137389_11084945	Not Available	686	Open in IMG/M
3300012189\|Ga0137388_10025452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4527	Open in IMG/M
3300012189\|Ga0137388_10418640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300012189\|Ga0137388_10525319	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300012189\|Ga0137388_10995699	Not Available	773	Open in IMG/M
3300012189\|Ga0137388_11206362	Not Available	694	Open in IMG/M
3300012202\|Ga0137363_10067166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2626	Open in IMG/M
3300012202\|Ga0137363_10247567	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300012202\|Ga0137363_11477420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012203\|Ga0137399_10492949	Not Available	1027	Open in IMG/M
3300012203\|Ga0137399_11152157	Not Available	653	Open in IMG/M
3300012361\|Ga0137360_11452219	Not Available	590	Open in IMG/M
3300012683\|Ga0137398_10551858	Not Available	795	Open in IMG/M
3300012683\|Ga0137398_10747321	Not Available	681	Open in IMG/M
3300012685\|Ga0137397_10000852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21073	Open in IMG/M
3300012918\|Ga0137396_10171809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300012918\|Ga0137396_10276654	Not Available	1240	Open in IMG/M
3300012918\|Ga0137396_10824897	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300012922\|Ga0137394_10073980	All Organisms → cellular organisms → Bacteria → Acidobacteria	2843	Open in IMG/M
3300012922\|Ga0137394_11193905	Not Available	625	Open in IMG/M
3300012923\|Ga0137359_10022250	All Organisms → cellular organisms → Bacteria	5392	Open in IMG/M
3300012923\|Ga0137359_10048940	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300012923\|Ga0137359_10121585	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300012923\|Ga0137359_10275879	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300012925\|Ga0137419_10036916	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300012927\|Ga0137416_10238506	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300012929\|Ga0137404_11314514	Not Available	667	Open in IMG/M
3300012929\|Ga0137404_11776227	Not Available	573	Open in IMG/M
3300012929\|Ga0137404_12312848	Not Available	503	Open in IMG/M
3300012944\|Ga0137410_10000609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24852	Open in IMG/M
3300015053\|Ga0137405_1410728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4144	Open in IMG/M
3300015241\|Ga0137418_10000482	All Organisms → cellular organisms → Bacteria	35506	Open in IMG/M
3300017931\|Ga0187877_1356190	Not Available	555	Open in IMG/M
3300017955\|Ga0187817_10130060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1595	Open in IMG/M
3300020140\|Ga0179590_1142904	Not Available	653	Open in IMG/M
3300020199\|Ga0179592_10037429	Not Available	2196	Open in IMG/M
3300020199\|Ga0179592_10084926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300020199\|Ga0179592_10437902	Not Available	566	Open in IMG/M
3300021046\|Ga0215015_10979914	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus sediminicola	571	Open in IMG/M
3300021088\|Ga0210404_10053430	Not Available	1909	Open in IMG/M
3300021088\|Ga0210404_10198241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300021170\|Ga0210400_10360491	Not Available	1197	Open in IMG/M
3300021404\|Ga0210389_11159357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	596	Open in IMG/M
3300026285\|Ga0209438_1211472	Not Available	520	Open in IMG/M
3300026319\|Ga0209647_1004587	All Organisms → cellular organisms → Bacteria	10342	Open in IMG/M
3300026359\|Ga0257163_1005459	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	1824	Open in IMG/M
3300026499\|Ga0257181_1085446	Not Available	550	Open in IMG/M
3300026551\|Ga0209648_10001595	All Organisms → cellular organisms → Bacteria	18415	Open in IMG/M
3300026551\|Ga0209648_10063045	All Organisms → cellular organisms → Bacteria	3139	Open in IMG/M
3300026551\|Ga0209648_10397575	Not Available	907	Open in IMG/M
3300027512\|Ga0209179_1004039	All Organisms → cellular organisms → Bacteria → Acidobacteria	2179	Open in IMG/M
3300027537\|Ga0209419_1007961	Not Available	1732	Open in IMG/M
3300027537\|Ga0209419_1058575	Not Available	752	Open in IMG/M
3300027591\|Ga0209733_1052925	Not Available	1072	Open in IMG/M
3300027671\|Ga0209588_1105244	Not Available	907	Open in IMG/M
3300027783\|Ga0209448_10298470	Not Available	528	Open in IMG/M
3300027846\|Ga0209180_10090089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1740	Open in IMG/M
3300027846\|Ga0209180_10293832	Not Available	932	Open in IMG/M
3300027846\|Ga0209180_10722523	Not Available	540	Open in IMG/M
3300027862\|Ga0209701_10061718	All Organisms → cellular organisms → Bacteria	2387	Open in IMG/M
3300027862\|Ga0209701_10298596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300027862\|Ga0209701_10511177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300027903\|Ga0209488_10040189	All Organisms → cellular organisms → Bacteria	3426	Open in IMG/M
3300028047\|Ga0209526_10002107	All Organisms → cellular organisms → Bacteria	13404	Open in IMG/M
3300028536\|Ga0137415_10013178	All Organisms → cellular organisms → Bacteria	8195	Open in IMG/M
3300028536\|Ga0137415_10080737	All Organisms → cellular organisms → Bacteria	3111	Open in IMG/M
3300028536\|Ga0137415_11264718	Not Available	555	Open in IMG/M
3300031823\|Ga0307478_10158263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1802	Open in IMG/M
3300031962\|Ga0307479_11716835	Not Available	581	Open in IMG/M
3300032160\|Ga0311301_10377317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2192	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.43%
Freshwater	Environmental → Aquatic → Freshwater	3.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.96%
Loam	Environmental → Terrestrial → Soil → Loam	4.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	73.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	70.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100636073	3300000597	Forest Soil	MSAKRTKGRWVVYERREGVFIPLSRRFTTRANAEKEHDPMQALFKYKQVSLGVGVVAKE*
JGI12635J15846_101052481	3300001593	Forest Soil	VTVGSYAITLPMSEKRMKGRWVVYERRNGEFVFLSRLFTTRALAEKERDKLEATFTYKKVSLGVGAIAKK*
JGI25614J43888_100197503	3300002906	Grasslands Soil	MSAKRTKGRWVVCEHRKGEFIFLSRLFTTRAQAEKERDKLKAAFTYKKVSFGVGLVKE*
JGI25614J43888_100938802	3300002906	Grasslands Soil	MSAKRTKGRWVVYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE*
JGI25617J43924_100247062	3300002914	Grasslands Soil	MSAKRTNGRWVVYEXRNGEFIRLSRLFTTRAQAEKERDKLEAMFTYKRVSLGVGVVKG*
JGI25617J43924_100355341	3300002914	Grasslands Soil	MSKRANARWVVYEHRNGEFLFVSRLFTTRAQAEKERDKLEAMFTYKRVSLGVGVVKE*
JGI25617J43924_100536432	3300002914	Grasslands Soil	MTLSMSANRTKGRWVVYERRKGEFIFLSRLFTTRAQAEKERDRLKAMFTYKRVSLGVGVVTE*
JGI25616J43925_101537942	3300002917	Grasslands Soil	MSAKRMTGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK*
JGI25616J43925_102219442	3300002917	Grasslands Soil	MVVYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE*
Ga0062389_1016974872	3300004092	Bog Forest Soil	MSKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKEREKLKAPFTYKRVSLGVGFVVKV*
Ga0099791_105917392	3300007255	Vadose Zone Soil	MSAKRMKGRWVVYERRNGEFIFPSRLFTTRAQADKERDKLKATFTYKVSLGVGAIAKK*
Ga0099793_102997482	3300007258	Vadose Zone Soil	MSAKRTTGRWVVYERLDGEFIFLSRLFTTRAQAEKERDKLKGTFTYKVSLGVGAIAKK*
Ga0099794_100506574	3300007265	Vadose Zone Soil	VYERRKGEFIRLSRLFTTRAQAEKECDKLEARFTYKKVSLGVGIVAKD*
Ga0099794_100961594	3300007265	Vadose Zone Soil	FRYAITLPMSAKRMKGRWVVYERRNGEFIFPSRLFTTRAQADKERDKLKATFTYKVSLGVGAIAKK*
Ga0099794_102079761	3300007265	Vadose Zone Soil	ANDGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLEAAFTYKKVSLGVGIVKE*
Ga0099794_104580011	3300007265	Vadose Zone Soil	MTGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK*
Ga0099794_104775063	3300007265	Vadose Zone Soil	TLLTVGSYAITLAMSAKRMNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK*
Ga0099794_106636052	3300007265	Vadose Zone Soil	LPMSAKRTKGRWVVCEHRKGEFIFLSRLFTTRAQAEKERDKLKAAFTYKKVSFGVGLVKE
Ga0099795_1000127811	3300007788	Vadose Zone Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0099829_100407042	3300009038	Vadose Zone Soil	MSAKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG*
Ga0099829_102956573	3300009038	Vadose Zone Soil	MSAKRTKGRWVVYERRKGEFIRLSRLFTTRVQAEKEREKLEATFTYKKVSFGVGVVAKV*
Ga0099830_100184247	3300009088	Vadose Zone Soil	MSAKRTKGRWVVYERRKGEFIRLSRLFTTRVQAEKEREKLEATFTYKKISFGVGVVAKV*
Ga0099830_100661054	3300009088	Vadose Zone Soil	ASTNAITLSMSAKRTKGQWVVYEHREGEFVSRSKLYTTRARAQKERDKLEAGLISKQVSLGVGIVAKE*
Ga0099830_102184721	3300009088	Vadose Zone Soil	MSAKRTKGRWVVYEQRKGEFIFLSRLFTTRAQAEKEREKLKATFKYKKVSFGVGVVAKV*
Ga0099830_109827662	3300009088	Vadose Zone Soil	MKGQCVVYERRNGEFICLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVAN
Ga0099830_113748911	3300009088	Vadose Zone Soil	RLSRLFTTKAQAEKEREKREKLATFTFKKKASLGVGVVAKE*
Ga0099830_114569141	3300009088	Vadose Zone Soil	SAKRTKARWVVYEHRKGKFIRLSRPFTTRAQAEKERDKLEARFTCKKVSFGVGIVKG*
Ga0099828_105787752	3300009089	Vadose Zone Soil	MSAKRTKRWVVYERRDGEFVFLSRLFTTRAQAEKERDKLKASFKPRLASLGVGVVAKE*
Ga0099828_109049902	3300009089	Vadose Zone Soil	AITLPMYAKRTKGRWFLYERRKGEFIRLSRLFTTRVEAEKERDRLEAAFTYKKVSFGVGLVSSSGS*
Ga0099792_105791392	3300009143	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSL
Ga0099792_109694701	3300009143	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0136449_1004286713	3300010379	Peatlands Soil	MCAKRTNGRWVVYERRNGEFIFLSRLLATRAQAEKERNKLKASFKSKRVSLGVGFVVKG*
Ga0137392_105602871	3300011269	Vadose Zone Soil	WVVYERREGKFIFLSRPLATRALAEKERDKLKASKSKWVSLGIGVVTWRKGRQQ*
Ga0137392_111002611	3300011269	Vadose Zone Soil	AFISHNCLSVSPMSAKRTKGRWVVYERRKGEFIFLSRLFTTRAQAEKERDRLEAAFTYKKVSFGVGLVSSSGS*
Ga0137392_115422302	3300011269	Vadose Zone Soil	WVVYERRNGEFVFLSRLFTTRAQAEKERDKLKASFKPRLASLGVGVVAKE*
Ga0137391_100469451	3300011270	Vadose Zone Soil	VIYERRNGEFIFLSRLFTTRAQAEKERDERQAAFKSKKVSLGVGVVVKG*
Ga0137391_113971461	3300011270	Vadose Zone Soil	PRRTKRRWVVYERLRGKFILRSRLFITRAQAEKERGRLQAAFTSKQVSLGVGVVLEE*
Ga0137393_109412632	3300011271	Vadose Zone Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAIA
Ga0137393_110648913	3300011271	Vadose Zone Soil	RRVVYGRGDGEFIFLSRLFTARAQREKDRDKLEGTFMYKVSLGVGAIAKK*
Ga0137389_103410633	3300012096	Vadose Zone Soil	AKRTKGRWVVYEQRKGEFIFLSRLFTTRAQAEKEREKLKATFKYKKVSFGVGVVAKV*
Ga0137389_103699333	3300012096	Vadose Zone Soil	LDTSAKRTKRRWVVYERREGEFVFLSRLLTMRAQAEEERDKLKASFKSRRVSLGVGVVLKLR*
Ga0137389_105057114	3300012096	Vadose Zone Soil	MSKRTKRRWIVYEHRNGEFIRLSRLFTTKAQAEKEREKREKLTAFTFKKKASLGVGVVKE
Ga0137389_110849451	3300012096	Vadose Zone Soil	MSKRTKLRWVLYELRDGEFIRLSRLFTTRAQAEKERERREKLKATFRFKKASLGVGVVVRE*
Ga0137388_100254528	3300012189	Vadose Zone Soil	MSAKRTRGRWVVYERRNGEFVFLSWLFTTRAQAEKERDKLKTSFKSRLASLGVGFVAKE
Ga0137388_104186401	3300012189	Vadose Zone Soil	TLPMSAKRTKGRWVVYERRKGEFIRLSRLFTTRVQAEKEREKLKATFKYKKVSFGVGVVAKV*
Ga0137388_105253191	3300012189	Vadose Zone Soil	MSAKRTKRWVVYERRNGEFVFLSRLFTTRAQAEKERDKLKTSFKSRLASLGVGFVAKE*
Ga0137388_109956992	3300012189	Vadose Zone Soil	MSAKRTKRWVVYERRDGEFIFLSRLFTTRAQAEKERDKLRASSKSRLASLGVGVVLKEVR
Ga0137388_112063622	3300012189	Vadose Zone Soil	VYERRDGEFIFLSRPFTTRAQAEKERDKLEATFTYKVSLGVGAIAKK*
Ga0137363_100671663	3300012202	Vadose Zone Soil	MSVKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG*
Ga0137363_102475672	3300012202	Vadose Zone Soil	MSAKRTTGRWVVYERLDGEFIFLSRLFTTRAQAEKERDKLKATFTYKVSLGVGAIAKK*
Ga0137363_114774201	3300012202	Vadose Zone Soil	MSAKRTKGRWVVYEHRNGEFIPLSRLFTTRAQAEKERDKLKATFIYKRVSLGVGVVKE*
Ga0137399_104929492	3300012203	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK*
Ga0137399_111521572	3300012203	Vadose Zone Soil	MNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK*
Ga0137360_114522192	3300012361	Vadose Zone Soil	MKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137398_105518582	3300012683	Vadose Zone Soil	SAKRMNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK*
Ga0137398_107473212	3300012683	Vadose Zone Soil	MSAKRTTGRWVVYERRSGGFIFLSRPFTRRAKAEKYRDKLGATFRYKVSLGV
Ga0137397_100008524	3300012685	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESDKLEAMFTSEKVSLGVGAIAKK*
Ga0137396_101718095	3300012918	Vadose Zone Soil	LFRYAITLPMFAKRMKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137396_102766543	3300012918	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESDKLEAAFTYKVSLGVGAIAKK*
Ga0137396_108248971	3300012918	Vadose Zone Soil	VYERRNGEFVFLSRFFATKAQAEKERDKLTAPFTYKKVSLGVGI
Ga0137394_100739807	3300012922	Vadose Zone Soil	VYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137394_111939052	3300012922	Vadose Zone Soil	YERRDGEFIFLSRPFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0137359_100222505	3300012923	Vadose Zone Soil	MSAKRTKGRWVVCEHRKAEFIFLSRLFTTRAQAEKERDKLKAAFTYKKVSFGVGLVKE*
Ga0137359_100489409	3300012923	Vadose Zone Soil	YERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0137359_101215854	3300012923	Vadose Zone Soil	VYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE*
Ga0137359_102758791	3300012923	Vadose Zone Soil	MSAKRTKGRWVVYEYRKGEFIVYSRLSTTRAQAEKERDKLKAAFKSKQVSLGVGVVPANSTGRR*
Ga0137419_100369167	3300012925	Vadose Zone Soil	AKRTTGRWVVYERLDGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0137416_102385061	3300012927	Vadose Zone Soil	RNGEFIFLSRLFTTRAQAEKGRDKLKATFIYKRVSLGVGVVKE*
Ga0137404_113145141	3300012929	Vadose Zone Soil	RYAITFPMSAKRTTGRWGVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0137404_117762272	3300012929	Vadose Zone Soil	AKRMKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK*
Ga0137404_123128481	3300012929	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSFGVGAIAKK*
Ga0137410_1000060914	3300012944	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESNKLEAMFTSEKVSLGVGAIAKK*
Ga0137405_14107284	3300015053	Vadose Zone Soil	VYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK*
Ga0137418_1000048234	3300015241	Vadose Zone Soil	MSAKRTTGRWVVYERLDGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAIAKK*
Ga0187877_13561901	3300017931	Peatland	VYERRNGEFIFLSRLFTTRAQAEKEREKLKAPSTYKRASLGVGFVVKV
Ga0187817_101300603	3300017955	Freshwater Sediment	MSAKRAKGRWVVYEHRNGKLIHLSRLFTTRAQAEKERDKLEAKVTYKKVSLGVGVVVKE
Ga0179590_11429042	3300020140	Vadose Zone Soil	MKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK
Ga0179592_100374291	3300020199	Vadose Zone Soil	MADWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK
Ga0179592_100849263	3300020199	Vadose Zone Soil	MSAKRMKSRWVVYERRNGEFIFLSRPFTTRAQAETERDKLKGTFTYKVSLGVGAIAKK
Ga0179592_104379021	3300020199	Vadose Zone Soil	MNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSL
Ga0215015_109799141	3300021046	Soil	VYEQRNGKFIFLSRLFTTKAQAEKERDRLEAKFTYKKVSFGVGIVKE
Ga0210404_100534304	3300021088	Soil	VTVGSYVITLPMSAKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKERDKLEAAFTYKKVSLGVGAIAKK
Ga0210404_101982411	3300021088	Soil	MSKRANARWVVYEHRKGEFLFVSRLFTTRAQAERERDKLEAMFTYKRVSLGVGVVKE
Ga0210400_103604911	3300021170	Soil	GSHGITLPMSAKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKERDKLEAAFTYKKVSLGVGAIAKK
Ga0210389_111593572	3300021404	Soil	SSWCPSCYNSPMSKRANARWVVYEHRKGEFLFVSRLFTTRAQAERERDKLEAMFTYKRVSLGVGVVKE
Ga0209438_12114721	3300026285	Grasslands Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAEKESNKLEAMFTSEKVSLGVGAIAKK
Ga0209647_10045873	3300026319	Grasslands Soil	VYEHRKGEFIFLSRLFTTRAQAEKERDKLKATFTYKKVSFGVGLVAKE
Ga0257163_10054594	3300026359	Soil	VYERRNEEFIRLSRLFTTRAQAEKERDKLKATFTYKRASLGVGVV
Ga0257181_10854461	3300026499	Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLEATFTYKVSLGVGAMAKK
Ga0209648_1000159519	3300026551	Grasslands Soil	MSKRANARWVVYEHRNGEFLFVSRLFTTRAQAEKERDKLEAMFTYKRVSLGVGVVKE
Ga0209648_100630453	3300026551	Grasslands Soil	MTLSMSANRTKGRWVVYERRKGEFIFLSRLFTTRAQAEKERDRLKAMFTYKRVSLGVGVVTE
Ga0209648_103975752	3300026551	Grasslands Soil	MSAKRMTGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEAAFTYKVSLGVGAIAKK
Ga0209179_10040392	3300027512	Vadose Zone Soil	MSAKRTTGRWVVYERRDGEFIFLSRPFTTRAQAEKERDKLKGTFTYKVSLGVGAVAKK
Ga0209419_10079615	3300027537	Forest Soil	LFVSRGRYSGTLVTVGSYAITVLMSEKRMKGRWVVYERRNGEFIFLSRLFTTRALAEKERDKLEATFTYKKVSLGVGAIAKK
Ga0209419_10585752	3300027537	Forest Soil	VTVGSYAITLPMSEKRMKGRWVVYERRNGEFVFLSRLFTTRALAEKERDKLEATFTYKKVSLG
Ga0209733_10529252	3300027591	Forest Soil	VTVGSYAITLPMSEKRMKGRWVVYERRNGEFVFLSRLFTTRALAEKERDKLEATFTYKKVSLGVGAIAKK
Ga0209588_11052443	3300027671	Vadose Zone Soil	FRYAITLPMSAKRMKGRWVVYERRNGEFIFPSRLFTTRAQADKERDKLKATFTYKVSLGVGAIAKK
Ga0209448_102984702	3300027783	Bog Forest Soil	MSKRTKGRWVVYERRNGEFIFLSRLFTTRAQAEKEREKLKAPFTYKRVSLGVGFVVKVYR
Ga0209180_100900891	3300027846	Vadose Zone Soil	AMSAKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG
Ga0209180_102938323	3300027846	Vadose Zone Soil	MSKRTKRRWIVYEHRNGEFIRLSRLFTTKAQAEKEREKREKLRAFTFKKASLGVAVVVKE
Ga0209180_107225232	3300027846	Vadose Zone Soil	MKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG
Ga0209701_100617181	3300027862	Vadose Zone Soil	AITLSMSAKRTKGQWVVYEHREGEFVSRSKLYTTRARAQKERDKLEAGLISKQVSLGVGIVAKE
Ga0209701_102985962	3300027862	Vadose Zone Soil	MSAKRMKGQWVVYERRNGEFIRLSRLFTTRAQAEKERDKRKVSFKFKRVSLGVGVVANG
Ga0209701_105111772	3300027862	Vadose Zone Soil	SAKRTKARWVVYEHRKGKFIRLSRPFTTRAQAEKERDKLEARFTCKKVSFGVGIVKG
Ga0209488_100401893	3300027903	Vadose Zone Soil	MSANRMKGRWVVYERRNGEFIFLSRLFTTRAQAETERDKLKATFTYKVSLGVGAVAKK
Ga0209526_100021077	3300028047	Forest Soil	MSAKRIKGRWVVYERRNGEFIFLSRPFTTRAQAEKERDKLKATFTYKVSLGVGAMAKK
Ga0137415_100131781	3300028536	Vadose Zone Soil	MNGRWVVYEHGNGEFIRLSRPFTTRAQAEKERDKLKVMFTYKRVSLGVGAIAKK
Ga0137415_100807376	3300028536	Vadose Zone Soil	MSKRANARWVVYERRNGEFIFLSRPFTTRAQAEKERDKLEATFTYKVSLGVGAIAKK
Ga0137415_112647181	3300028536	Vadose Zone Soil	MKGRWVVYERRNGEFIFLSRFFTTRAQAAKESNKLEAMFTSEKVSLGVGAIAKK
Ga0307478_101582634	3300031823	Hardwood Forest Soil	MSAKRTKGQLVVYERPSGEFIFLSRLFTTRAQAERERDKLEATFTYKKVSLGVGAIAKK
Ga0307479_117168351	3300031962	Hardwood Forest Soil	MSAKRTKGQLVVYERPSGEFIFLSRLFTTRAQAERERDKLEATFTYKKVSLGVGAIA
Ga0311301_103773174	3300032160	Peatlands Soil	MCAKRTNGRWVVYERRNGEFIFLSRLLATRAQAEKERNKLKASFKSKRVSLGVGFVVKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083762

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences