Metagenome / Metatranscriptome Family F083710

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F083710
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	65 residues
Representative Sequence	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Number of Associated Samples	94
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.36 %
% of genes near scaffold ends (potentially truncated)	38.39 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (34.821 % of family members)
Environment Ontology (ENVO)	Unclassified (68.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (83.929 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.82% β-sheet: 3.03% Coil/Unstructured: 65.15%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03054	tRNA_Me_trans	37.50
PF00436	SSB	19.64
PF05016	ParE_toxin	13.39
PF01402	RHH_1	11.61
PF07690	MFS_1	8.04
PF05222	AlaDh_PNT_N	3.57
PF00215	OMPdecase	0.89
PF00583	Acetyltransf_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	37.50
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	19.64
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	19.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.14 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.14 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.14 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.46 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	63.39 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	63.39 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	52.68 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.86 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	16.07 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	4.46 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.89 %
unclassified Comamonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.86 %
Hydrogenophaga aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	16.07 %
unclassified Limnohabitans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans	4.46 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	0.89 %
Ramlibacter tataouinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.86 %
Hydrogenophaga aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	16.07 %
Limnohabitans sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	2.68 %
Limnohabitans sp. Rim47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	1.79 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	0.89 %
Ramlibacter tataouinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000206\|M3P_c10025209	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300001847\|RCM41_1023460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2350	Open in IMG/M
3300001848\|RCM47_1024561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	582	Open in IMG/M
3300004112\|Ga0065166_10122395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	969	Open in IMG/M
3300004763\|Ga0007746_1072418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	616	Open in IMG/M
3300004767\|Ga0007750_1504134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1217	Open in IMG/M
3300004772\|Ga0007791_10090756	Not Available	932	Open in IMG/M
3300004788\|Ga0007742_11100547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	970	Open in IMG/M
3300005581\|Ga0049081_10331190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	519	Open in IMG/M
3300005582\|Ga0049080_10257828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	568	Open in IMG/M
3300005662\|Ga0078894_10477300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1121	Open in IMG/M
3300007590\|Ga0102917_1073605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1204	Open in IMG/M
3300007597\|Ga0102919_1225206	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300007632\|Ga0102894_1188357	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300007972\|Ga0105745_1077018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	955	Open in IMG/M
3300007973\|Ga0105746_1039727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1457	Open in IMG/M
3300009068\|Ga0114973_10061588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2188	Open in IMG/M
3300009151\|Ga0114962_10026748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4002	Open in IMG/M
3300009151\|Ga0114962_10028853	All Organisms → cellular organisms → Bacteria → Proteobacteria	3828	Open in IMG/M
3300009151\|Ga0114962_10074170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2173	Open in IMG/M
3300009151\|Ga0114962_10163069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	1330	Open in IMG/M
3300009154\|Ga0114963_10074682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	2111	Open in IMG/M
3300009154\|Ga0114963_10216527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1101	Open in IMG/M
3300009155\|Ga0114968_10537089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	624	Open in IMG/M
3300009158\|Ga0114977_10595495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	597	Open in IMG/M
3300009159\|Ga0114978_10358115	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300009159\|Ga0114978_10409870	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300009159\|Ga0114978_10736404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	560	Open in IMG/M
3300009160\|Ga0114981_10452052	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300009164\|Ga0114975_10073973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1986	Open in IMG/M
3300009180\|Ga0114979_10053744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	2524	Open in IMG/M
3300009180\|Ga0114979_10307869	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300009180\|Ga0114979_10705056	Not Available	571	Open in IMG/M
3300009180\|Ga0114979_10863473	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300009182\|Ga0114959_10179928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1106	Open in IMG/M
3300009184\|Ga0114976_10355195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp.	774	Open in IMG/M
3300009218\|Ga0103848_1081984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	645	Open in IMG/M
3300009233\|Ga0103856_10002211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2728	Open in IMG/M
3300009235\|Ga0103857_10023791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1074	Open in IMG/M
3300009243\|Ga0103860_10157098	Not Available	522	Open in IMG/M
3300009247\|Ga0103861_10065991	Not Available	581	Open in IMG/M
3300009249\|Ga0103862_1007829	Not Available	1213	Open in IMG/M
3300009684\|Ga0114958_10538128	Not Available	560	Open in IMG/M
3300010157\|Ga0114964_10053546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2106	Open in IMG/M
3300010158\|Ga0114960_10259738	Not Available	884	Open in IMG/M
3300010334\|Ga0136644_10318300	Not Available	898	Open in IMG/M
3300010885\|Ga0133913_12692783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	1203	Open in IMG/M
3300010885\|Ga0133913_12750821	Not Available	1187	Open in IMG/M
3300010885\|Ga0133913_13410688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	1040	Open in IMG/M
3300011268\|Ga0151620_1097086	Not Available	932	Open in IMG/M
3300012710\|Ga0157550_1044921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	587	Open in IMG/M
3300012718\|Ga0157557_1236024	Not Available	655	Open in IMG/M
3300012728\|Ga0157552_1118828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	788	Open in IMG/M
3300012745\|Ga0157532_143465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	529	Open in IMG/M
3300012771\|Ga0138270_1026353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	689	Open in IMG/M
3300013006\|Ga0164294_10279743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1162	Open in IMG/M
3300013014\|Ga0164295_10579927	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300013014\|Ga0164295_10772889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	743	Open in IMG/M
3300013063\|Ga0157558_148086	Not Available	511	Open in IMG/M
3300013285\|Ga0136642_1041271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1283	Open in IMG/M
3300014819\|Ga0119954_1009393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2283	Open in IMG/M
3300018790\|Ga0187842_1035759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1594	Open in IMG/M
3300018815\|Ga0187845_1076064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1141	Open in IMG/M
3300018868\|Ga0187844_10484196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	502	Open in IMG/M
3300019093\|Ga0187843_10200424	Not Available	845	Open in IMG/M
3300020141\|Ga0211732_1354178	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300020151\|Ga0211736_10996080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1876	Open in IMG/M
3300020157\|Ga0194049_1068462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	934	Open in IMG/M
3300020159\|Ga0211734_10313355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1654	Open in IMG/M
3300020159\|Ga0211734_10634872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2154	Open in IMG/M
3300020160\|Ga0211733_10185303	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300020167\|Ga0194035_1170365	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300020229\|Ga0194042_1062158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	987	Open in IMG/M
3300021340\|Ga0194041_10181404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	644	Open in IMG/M
3300021354\|Ga0194047_10045924	All Organisms → cellular organisms → Bacteria → Proteobacteria	2004	Open in IMG/M
3300021516\|Ga0194045_1163248	Not Available	552	Open in IMG/M
3300021519\|Ga0194048_10176136	All Organisms → cellular organisms → Bacteria → Proteobacteria	797	Open in IMG/M
3300021963\|Ga0222712_10192004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1345	Open in IMG/M
3300022591\|Ga0236341_1001145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	15270	Open in IMG/M
3300022591\|Ga0236341_1129842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	530	Open in IMG/M
3300022592\|Ga0236342_1002615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	8306	Open in IMG/M
3300022747\|Ga0228703_1024099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1906	Open in IMG/M
3300022747\|Ga0228703_1039204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1347	Open in IMG/M
3300022747\|Ga0228703_1039205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1347	Open in IMG/M
3300022748\|Ga0228702_1043482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1254	Open in IMG/M
3300023179\|Ga0214923_10078291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2337	Open in IMG/M
3300023184\|Ga0214919_10559626	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300025763\|Ga0255250_1028305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1211	Open in IMG/M
3300027329\|Ga0255109_1072848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	734	Open in IMG/M
3300027627\|Ga0208942_1016079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2445	Open in IMG/M
3300027697\|Ga0209033_1089583	Not Available	1025	Open in IMG/M
(restricted) 3300027728\|Ga0247836_1095981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	1447	Open in IMG/M
3300027736\|Ga0209190_1259023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	684	Open in IMG/M
3300027741\|Ga0209085_1208512	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300027747\|Ga0209189_1260621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	689	Open in IMG/M
3300027749\|Ga0209084_1209834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Rim47	779	Open in IMG/M
3300027754\|Ga0209596_1193176	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300027760\|Ga0209598_10250871	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300027764\|Ga0209134_10080752	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
3300027804\|Ga0209358_10052045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2417	Open in IMG/M
3300027808\|Ga0209354_10343557	Not Available	588	Open in IMG/M
3300027969\|Ga0209191_1146709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	966	Open in IMG/M
3300027969\|Ga0209191_1307706	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300028105\|Ga0255254_1118972	Not Available	528	Open in IMG/M
3300028392\|Ga0304729_1005895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	6330	Open in IMG/M
3300028394\|Ga0304730_1303862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	548	Open in IMG/M
3300032092\|Ga0315905_10465992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1171	Open in IMG/M
3300034023\|Ga0335021_0260616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	944	Open in IMG/M
3300034116\|Ga0335068_0115448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1489	Open in IMG/M
3300034116\|Ga0335068_0465115	Not Available	592	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	94.64%
Marine	Environmental → Aquatic → Marine	5.36%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	66.07%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.14%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.57%
Creek	Environmental → Aquatic → Freshwater → Creek	3.57%
River	Environmental → Aquatic → Freshwater → River	2.68%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.68%
Coastal	Environmental → Aquatic → Marine → Coastal	1.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	66.07%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	11.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.68%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	34.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.50%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	8.04%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	6.25%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	6.25%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	3.57%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.68%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.68%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.68%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.79%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000206	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters	Environmental	Open in IMG/M
3300001847	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM41. ROCA_DNA251_0.2um_TAP-D_2a	Environmental	Open in IMG/M
3300001848	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM47, ROCA_DNA265_0.2um_TAP-S_3a	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004767	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental	Open in IMG/M
3300004788	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007632	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009218	Microbial communities of water from Amazon river, Brazil - RCM1	Environmental	Open in IMG/M
3300009230	Microbial communities of water from Amazon river, Brazil - RCM8	Environmental	Open in IMG/M
3300009233	Microbial communities of water from Amazon river, Brazil - RCM9	Environmental	Open in IMG/M
3300009235	Microbial communities of water from Amazon river, Brazil - RCM10	Environmental	Open in IMG/M
3300009243	Microbial communities of water from Amazon river, Brazil - RCM13	Environmental	Open in IMG/M
3300009247	Microbial communities of water from Amazon river, Brazil - RCM14	Environmental	Open in IMG/M
3300009249	Microbial communities of water from Amazon river, Brazil - RCM15	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012710	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES041 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012718	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES050 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012728	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES043 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012745	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES017 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012771	Freshwater microbial communities from Lake Croche, Canada - C_130625_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013063	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES051 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300014819	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1011A	Environmental	Open in IMG/M
3300018790	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_41	Environmental	Open in IMG/M
3300018815	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020167	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20m	Environmental	Open in IMG/M
3300020229	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-12m	Environmental	Open in IMG/M
3300021340	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-9m	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300022592	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S3	Environmental	Open in IMG/M
3300022747	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MG	Environmental	Open in IMG/M
3300022748	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MG	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025763	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027329	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8h	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027728 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14m	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028105	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
M3P_100252091	3300000206	Lotic	IEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
RCM41_10234601	3300001847	Marine Plankton	MSRIDATNSRVAMDMQMARAAEKKQQAQPMKAKELPAPVPAKENVKVATAPAVNIYNSKGIVAKL*
RCM47_10245612	3300001848	Marine Plankton	MSRIDATSSRVAMDMQMARAAEKKQQAQPMKAKELPAPAPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0065166_101223951	3300004112	Freshwater Lake	ARNGQAGENYMSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPPPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0007746_10724182	3300004763	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKAKQQDRPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0007750_15041341	3300004767	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0007791_100907561	3300004772	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKSKQQERPMKAKEVPQPPPAKENVKVATAPAVN
Ga0007742_111005471	3300004788	Freshwater Lake	IMSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0049081_103311901	3300005581	Freshwater Lentic	MDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0049080_102578282	3300005582	Freshwater Lentic	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPPPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0078894_104773003	3300005662	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0102917_10736053	3300007590	Estuarine	MSRIEAAAPRVAMDMQMTKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0102919_12252061	3300007597	Estuarine	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSK
Ga0102894_11883571	3300007632	Estuarine	MSRIEAAAPRVAMDMQMTKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0105745_10770181	3300007972	Estuary Water	KKSAGETIMSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0105746_10397274	3300007973	Estuary Water	DMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114973_100615883	3300009068	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQAQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114962_100267486	3300009151	Freshwater Lake	MSRIEASAPRAAMDMQMAKMAEKTKQQALPMKAKETPALPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114962_100288536	3300009151	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKSKQQERPMKAKEVPQPPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114962_100741702	3300009151	Freshwater Lake	VRNSQAGENYMSRIEAAAPRVAMDMQMAKMAEKKQQAQPMKAKETPAPLPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114962_101630692	3300009151	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQAQPMKAKETPALPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114963_100746821	3300009154	Freshwater Lake	IACNSQAGENDMSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPQPPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114963_102165272	3300009154	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQALPMKAKETPALPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114968_105370892	3300009155	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQERPMKAKEVRLPLPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114977_105954952	3300009158	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQSQPMKAKETPATPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114978_103581152	3300009159	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIY
Ga0114978_104098702	3300009159	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYN
Ga0114978_107364041	3300009159	Freshwater Lake	MSRIEAAAPRAAMDMQMTKMAEKTKQQAQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114981_104520521	3300009160	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKTKQQSQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114975_100739732	3300009164	Freshwater Lake	MSRIEAAAPRVAMDVQMAKMAEKSKQQERPMKAKEVPQPPPAKENVKVTTAPVVNIYNSKGIVAKL*
Ga0114979_100537445	3300009180	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMVEKKQQAQPMKAKETPAPPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114979_103078692	3300009180	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQSQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114979_107050562	3300009180	Freshwater Lake	TCKKSAGETIMSRIEAAAPRVAMDMQMAKMAEKAKQQDRPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114979_108634732	3300009180	Freshwater Lake	MSRIEGASPRVAMDMQMAKMAEKAKQQERPMKAKEVPQPPPAKENVKVTTAPVVNIYNSKGIVAKL*
Ga0114959_101799284	3300009182	Freshwater Lake	EAAAPRAAMDMQMAKMAEKTKQQAQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114976_103551953	3300009184	Freshwater Lake	MSRIEAAAPRAAMDMQMAKTAEKAKQQERPMKAKEVPLPLPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0103848_10819842	3300009218	River Water	MSRIDATSSRVAMDMQMARVAEKKQQAQPMKAKELPAPPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0103855_100742891	3300009230	River Water	DMQMARVAEKKQQAQPMKAKELPAPAPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0103856_100022113	3300009233	River Water	MSRINAATPRVATDIQIARMAEKKQQAQPIKAKEFPLPPVAKENVKVASAPAVNIYNSKGIVAKL*
Ga0103857_100237912	3300009235	River Water	MSRINAATPRVATDIQIARMAEKKQQAQPIKAKELPLPPVAKENVKVASAPAVNIYNSKGIVAKL*
Ga0103860_101570982	3300009243	River Water	SVGDGLMSRINAATPRVATDIQIARMAEKKQQAQPIKAKELPLPPVAKENVKVASAPAVNIYNSKGIVAKL*
Ga0103861_100659912	3300009247	River Water	MSRINAATPRVATDIQIARMAEKKQQAQPIKAKELPLPPVAKENVKLASAPAVNIYNSKGIVAKL*
Ga0103862_10078292	3300009249	River Water	MDMQMARAAEKKQQAQPMKAKELPAPAPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114958_105381281	3300009684	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0114964_100535461	3300010157	Freshwater Lake	APRAAMDMQMAKMAEKTKQQALPMKAKETPALPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0114960_102597384	3300010158	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQERPMKAKEVPLPLPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0136644_103183001	3300010334	Freshwater Lake	HMSRIEAAAPRAAMDMQMAKMAEKTKQQERPMKAKEVPLPLPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0133913_126927832	3300010885	Freshwater Lake	VRNSQAGENYMSRIEAAAPRVAMDVQMAKMAEKKQQAQPMKAKETPAPLPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0133913_127508211	3300010885	Freshwater Lake	APRVAMDMQMAKMAEKSKQQERPMKAKEVPQPPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0133913_134106882	3300010885	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKSKQQERPMKAKEVPQPPPAKENLKVATAPAVNIYNSKGIVAKL*
Ga0151620_10970861	3300011268	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNMYNSKGIVAKL*
Ga0157550_10449211	3300012710	Freshwater	AGETIMSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0157557_12360242	3300012718	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPSKENVKVETAPAVNIYNSKGIVAKL*
Ga0157552_11188281	3300012728	Freshwater	SRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0157532_1434652	3300012745	Freshwater	RIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0138270_10263531	3300012771	Freshwater Lake	HMSRIEAAAPRAAMDMQMAKMAEKTKQQAQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0164294_102797432	3300013006	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKGVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0164295_105799272	3300013014	Freshwater	MSRIEGASPRVAMDMQKAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0164295_107728891	3300013014	Freshwater	CKKSAGETIMSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPSKENVKVETAPAVNIYNSKGIVAKL*
Ga0157558_1480862	3300013063	Freshwater	MQKSAGETIMSRIEAAAPRVAMDMQMAKMAEKAKQQDRPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
Ga0136642_10412712	3300013285	Freshwater	MSRIEAAAPRAAMDMQMAKMAEKTKQQALPMKAKETPALPPAKESVKVATAPAVNIYNSKGIVAKL*
Ga0119954_10093934	3300014819	Freshwater	EAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPQPPPAKENVKVATAPAVNIYNSKGIVAKL*
Ga0187842_10357592	3300018790	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0187845_10760641	3300018815	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0187844_104841961	3300018868	Freshwater	MSRIEAAAPRVAMDMQMAKIAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0187843_102004241	3300019093	Freshwater	AAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAK
Ga0211732_13541782	3300020141	Freshwater	MSRIEAAAPRAAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0211736_109960802	3300020151	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPIKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0194049_10684622	3300020157	Anoxic Zone Freshwater	MSRIEAAAPRAAMDMQMAKMAEKTKQQAQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0211734_103133551	3300020159	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPPPPPAKENVKVETAPAVNIYNSKGIVAK
Ga0211734_106348722	3300020159	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPPPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0211733_101853031	3300020160	Freshwater	PRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0194035_11703652	3300020167	Anoxic Zone Freshwater	MSRIEAAAPRAAMDMQMAKMAEKTKQQSQPMKAKETPATPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0194042_10621582	3300020229	Anoxic Zone Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLHPPAKENVKVATAPAVNIYNSKGIVAKL
Ga0194041_101814041	3300021340	Anoxic Zone Freshwater	MSRIEAAAPRAAMDMQMAKMAEKTKQQDQPMKAKEPPAPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0194047_100459243	3300021354	Anoxic Zone Freshwater	MSRIEAAAPRAAMDMQMAKMAEKTKQQALPMKAKETPALPPAKENVKVATAPAVNIYNSKGIVAKL
Ga0194045_11632481	3300021516	Anoxic Zone Freshwater	MSRIEAAAPRVAMDMQMAKMTEKAKQQERPMKAKEVPLPSPAKENVKVETAPAVNIYNSKGIVAKL
Ga0194048_101761361	3300021519	Anoxic Zone Freshwater	MSRIEAAAPRAAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAV
Ga0222712_101920044	3300021963	Estuarine Water	MSRIEAAAPRVAMDMQMTKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0236341_100114514	3300022591	Freshwater	MSRIDTAVPRAATNMPKAKLAEKTKPPAHPMKSKELPLPPPSKENVKVATAPAVNMYNSKGIVAKL
Ga0236341_11298421	3300022591	Freshwater	APRVAMDMQMAKMAEKSKQQERPMKAKEVPQPPPAKENVKVATAPAVNIYNSKGIVAKL
Ga0236342_10026153	3300022592	Freshwater	MSRIDTAVPRAATNMPKAKLAEKTKAPAHPMKSKELPLPPPSKENVKVATAPAVNMYNSKGIVAKL
Ga0228703_10240991	3300022747	Freshwater	MSRIEAATPRVAMDMQMAKMADKKQQAQPIKAKELPAPLPAKENVKVATAPAVN
Ga0228703_10392042	3300022747	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKKQQAQPMKAKELPAPLPAKENVKVATAPAVNIYNSKGIVAKL
Ga0228703_10392052	3300022747	Freshwater	MSRIEAATPRVAMDMQMAKMAEKKQQTQPMKAKETPNPPPAKENVKVATAPAVNIYNSKGIVAKL
Ga0228702_10434823	3300022748	Freshwater	AAAPRVAMDMQMAKMAEKKQQAQPMKAKELPAPLPAKENVKVATAPAVNIYNSKGIVAKL
Ga0214923_100782913	3300023179	Freshwater	MSRIEAATPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNMYNSKGIVAKL
Ga0214919_105596261	3300023184	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKGVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0255250_10283051	3300025763	Freshwater	PRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0255109_10728481	3300027329	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPPPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0208942_10160792	3300027627	Freshwater Lentic	MSRIEAAAPRVAMDMQIAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209033_10895831	3300027697	Freshwater Lake	AMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVTKL
(restricted) Ga0247836_10959811	3300027728	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQDRPMKAKEVPPPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209190_12590232	3300027736	Freshwater Lake	APRAAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209085_12085121	3300027741	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQAQPMKAKETPALPPAKENVKVATAPAVNIYNSKGIVAKL
Ga0209189_12606213	3300027747	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQERPMKAKEVPLPLPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209084_12098341	3300027749	Freshwater Lake	SHMSRIEAAAPRAAMDMQMAKMAEKTKQQERPMKAKEVPLPLPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209596_11931762	3300027754	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQSQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209598_102508711	3300027760	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKTKQQAQPMKAKETPAPPPAKENVKVETAPAVNI
Ga0209134_100807522	3300027764	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAMENVKVETAPAVNIYNSKGIVAKL
Ga0209358_100520452	3300027804	Freshwater Lake	MSRIEAAAPRAAMDMQMAKMAEKAKQQERPMKAKEVPPPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209354_103435572	3300027808	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGI
Ga0209400_12190351	3300027963	Freshwater Lake	DMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0209191_11467091	3300027969	Freshwater Lake	IEAAAPRVAMDMQMAKMVEKKQQAQPMKAKETPAPPPAKENVKVATAPAVNIYNSKGIVAKL
Ga0209191_13077062	3300027969	Freshwater Lake	MSRIEAAAPRVAMDVQMAKMAEKSKQQERPMKAKEVPQPPPAKENVKVTTAPVVNIYNSKGIVAKL
Ga0255254_11189721	3300028105	Freshwater	ACKKSAGETIMSRIETAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0304729_10058953	3300028392	Freshwater Lake	MSRIEAAAPRAAMDMQMTKMAEKTKQQAQPMKAKETPAPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0304730_13038621	3300028394	Freshwater Lake	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSK
Ga0315905_104659923	3300032092	Freshwater	MSRIETAAPRVAMDMQMAKMAEKAKQQERPMKSKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0335021_0260616_747_911	3300034023	Freshwater	MDMQMAKMAEKAKQQERPMKAKEVPPPPPAKENVKVETAPAVNIYNSKGIVAKL
Ga0335068_0115448_889_1089	3300034116	Freshwater	MSRIEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPPPPPAKENVKVESAPAVNIYNSKGIVAKL
Ga0335068_0465115_19_183	3300034116	Freshwater	MDMQMAKMAEKARQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters