Metagenome / Metatranscriptome Family F083682

Basic Information
Family ID	F083682
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	65 residues
Representative Sequence	MKMDSDVLLLSYLDKICLILTGELWRALACLYSEARLYKGARAASLSQSTTLHSTGNTSV
Number of Associated Samples	51
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.51 %
% of genes near scaffold ends (potentially truncated)	42.86 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Unclassified (99.107 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (50.893 % of family members)
Environment Ontology (ENVO)	Unclassified (73.214 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (58.036 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.27% β-sheet: 0.00% Coil/Unstructured: 47.73%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00665	rve	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.89
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.89
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.89
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.89

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.11 %
All Organisms	root	All Organisms	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.11 %
cellular organisms	root	All Organisms → cellular organisms	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.11 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.89 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002276\|B570J29586_1018300	Not Available	635	Open in IMG/M
3300002276\|B570J29586_1018900	Not Available	624	Open in IMG/M
3300002835\|B570J40625_100338484	Not Available	1498	Open in IMG/M
3300005044\|Ga0071351_1014861	Not Available	1850	Open in IMG/M
3300005044\|Ga0071351_1027064	Not Available	1663	Open in IMG/M
3300005044\|Ga0071351_1034061	Not Available	1026	Open in IMG/M
3300005069\|Ga0071350_1118448	Not Available	1362	Open in IMG/M
3300005069\|Ga0071350_1135449	Not Available	799	Open in IMG/M
3300005420\|Ga0068879_1694526	Not Available	546	Open in IMG/M
3300005525\|Ga0068877_10272077	Not Available	988	Open in IMG/M
3300005525\|Ga0068877_10566834	Not Available	620	Open in IMG/M
3300005525\|Ga0068877_10748841	Not Available	519	Open in IMG/M
3300005527\|Ga0068876_10238184	Not Available	1046	Open in IMG/M
3300005527\|Ga0068876_10548485	Not Available	630	Open in IMG/M
3300005527\|Ga0068876_10576009	Not Available	611	Open in IMG/M
3300005528\|Ga0068872_10111267	Not Available	1626	Open in IMG/M
3300005528\|Ga0068872_10209051	Not Available	1110	Open in IMG/M
3300005528\|Ga0068872_10368189	Not Available	786	Open in IMG/M
3300005528\|Ga0068872_10397471	Not Available	750	Open in IMG/M
3300005528\|Ga0068872_10551592	Not Available	614	Open in IMG/M
3300005528\|Ga0068872_10614361	Not Available	575	Open in IMG/M
3300008105\|Ga0114338_1124247	Not Available	918	Open in IMG/M
3300008105\|Ga0114338_1136726	Not Available	862	Open in IMG/M
3300008105\|Ga0114338_1195756	Not Available	680	Open in IMG/M
3300008105\|Ga0114338_1207844	Not Available	653	Open in IMG/M
3300008105\|Ga0114338_1244708	Not Available	583	Open in IMG/M
3300008108\|Ga0114341_10279049	Not Available	882	Open in IMG/M
3300008108\|Ga0114341_10294754	Not Available	847	Open in IMG/M
3300008108\|Ga0114341_10401850	Not Available	663	Open in IMG/M
3300008108\|Ga0114341_10449797	Not Available	602	Open in IMG/M
3300008112\|Ga0114345_1006916	Not Available	2737	Open in IMG/M
3300008112\|Ga0114345_1007742	All Organisms → cellular organisms → Eukaryota	3108	Open in IMG/M
3300008112\|Ga0114345_1021065	Not Available	1745	Open in IMG/M
3300008112\|Ga0114345_1057777	Not Available	1169	Open in IMG/M
3300008112\|Ga0114345_1058844	Not Available	1161	Open in IMG/M
3300008112\|Ga0114345_1085035	Not Available	1000	Open in IMG/M
3300008112\|Ga0114345_1129298	Not Available	836	Open in IMG/M
3300008112\|Ga0114345_1165151	Not Available	1130	Open in IMG/M
3300008112\|Ga0114345_1285755	Not Available	554	Open in IMG/M
3300008112\|Ga0114345_1293149	Not Available	545	Open in IMG/M
3300008115\|Ga0114348_1018179	Not Available	1755	Open in IMG/M
3300008118\|Ga0114352_1009955	Not Available	5389	Open in IMG/M
3300008118\|Ga0114352_1062985	Not Available	765	Open in IMG/M
3300008118\|Ga0114352_1113237	Not Available	565	Open in IMG/M
3300008118\|Ga0114352_1114483	Not Available	562	Open in IMG/M
3300008263\|Ga0114349_1027211	Not Available	3511	Open in IMG/M
3300008263\|Ga0114349_1062375	Not Available	2255	Open in IMG/M
3300008263\|Ga0114349_1136092	Not Available	1003	Open in IMG/M
3300008263\|Ga0114349_1252642	Not Available	569	Open in IMG/M
3300012712\|Ga0157598_1247594	Not Available	513	Open in IMG/M
3300012724\|Ga0157611_1012971	Not Available	561	Open in IMG/M
3300012731\|Ga0157616_1187594	Not Available	542	Open in IMG/M
3300012733\|Ga0157606_1301475	Not Available	856	Open in IMG/M
3300012734\|Ga0157615_1336977	Not Available	858	Open in IMG/M
3300013004\|Ga0164293_10606487	Not Available	710	Open in IMG/M
3300013005\|Ga0164292_10778574	Not Available	606	Open in IMG/M
3300013005\|Ga0164292_10938664	Not Available	542	Open in IMG/M
3300016683\|Ga0180042_154959	Not Available	652	Open in IMG/M
3300020509\|Ga0208594_1022626	Not Available	699	Open in IMG/M
3300020511\|Ga0208593_1024217	Not Available	698	Open in IMG/M
3300020534\|Ga0208596_1050174	Not Available	551	Open in IMG/M
3300020558\|Ga0208362_1069475	Not Available	529	Open in IMG/M
3300027793\|Ga0209972_10177915	Not Available	1000	Open in IMG/M
3300027793\|Ga0209972_10265783	Not Available	768	Open in IMG/M
3300033816\|Ga0334980_0266839	Not Available	671	Open in IMG/M
3300033816\|Ga0334980_0303508	Not Available	619	Open in IMG/M
3300033993\|Ga0334994_0260220	Not Available	902	Open in IMG/M
3300033993\|Ga0334994_0430368	Not Available	630	Open in IMG/M
3300033994\|Ga0334996_0246707	Not Available	921	Open in IMG/M
3300033995\|Ga0335003_0188550	Not Available	997	Open in IMG/M
3300034012\|Ga0334986_0277842	Not Available	898	Open in IMG/M
3300034012\|Ga0334986_0618683	Not Available	513	Open in IMG/M
3300034018\|Ga0334985_0287633	Not Available	1035	Open in IMG/M
3300034018\|Ga0334985_0529136	Not Available	672	Open in IMG/M
3300034020\|Ga0335002_0562540	Not Available	597	Open in IMG/M
3300034023\|Ga0335021_0057090	Not Available	2349	Open in IMG/M
3300034023\|Ga0335021_0684691	Not Available	501	Open in IMG/M
3300034064\|Ga0335001_0276508	Not Available	921	Open in IMG/M
3300034064\|Ga0335001_0481951	Not Available	659	Open in IMG/M
3300034064\|Ga0335001_0661722	Not Available	546	Open in IMG/M
3300034064\|Ga0335001_0755335	Not Available	505	Open in IMG/M
3300034066\|Ga0335019_0658611	Not Available	606	Open in IMG/M
3300034066\|Ga0335019_0675225	Not Available	596	Open in IMG/M
3300034066\|Ga0335019_0810108	Not Available	528	Open in IMG/M
3300034082\|Ga0335020_0002012	Not Available	14055	Open in IMG/M
3300034082\|Ga0335020_0179219	Not Available	1063	Open in IMG/M
3300034082\|Ga0335020_0266803	Not Available	844	Open in IMG/M
3300034082\|Ga0335020_0443902	Not Available	621	Open in IMG/M
3300034082\|Ga0335020_0480769	Not Available	591	Open in IMG/M
3300034093\|Ga0335012_0434377	Not Available	635	Open in IMG/M
3300034093\|Ga0335012_0557934	Not Available	535	Open in IMG/M
3300034093\|Ga0335012_0571626	Not Available	526	Open in IMG/M
3300034101\|Ga0335027_0829130	Not Available	533	Open in IMG/M
3300034107\|Ga0335037_0307949	Not Available	862	Open in IMG/M
3300034109\|Ga0335051_0484360	Not Available	577	Open in IMG/M
3300034112\|Ga0335066_0604146	Not Available	567	Open in IMG/M
3300034116\|Ga0335068_0363179	Not Available	702	Open in IMG/M
3300034117\|Ga0335033_0354554	Not Available	735	Open in IMG/M
3300034117\|Ga0335033_0490491	Not Available	589	Open in IMG/M
3300034117\|Ga0335033_0567985	Not Available	532	Open in IMG/M
3300034117\|Ga0335033_0577200	Not Available	527	Open in IMG/M
3300034200\|Ga0335065_0142506	Not Available	1601	Open in IMG/M
3300034280\|Ga0334997_0296534	Not Available	1043	Open in IMG/M
3300034280\|Ga0334997_0523832	Not Available	738	Open in IMG/M
3300034280\|Ga0334997_0703508	Not Available	615	Open in IMG/M
3300034280\|Ga0334997_0761552	Not Available	585	Open in IMG/M
3300034284\|Ga0335013_0657258	Not Available	604	Open in IMG/M
3300034355\|Ga0335039_0440936	Not Available	662	Open in IMG/M
3300034356\|Ga0335048_0105441	Not Available	1686	Open in IMG/M
3300034356\|Ga0335048_0327409	Not Available	784	Open in IMG/M
3300034357\|Ga0335064_0950068	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	75.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	24.11%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	75.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.86%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.25%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	50.89%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	25.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.39%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.25%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater, Plankton	2.68%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002276	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005044	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0048	Environmental	Open in IMG/M
3300005069	Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024	Environmental	Open in IMG/M
3300005420	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300008105	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, sample E2014-0046-100-LTR	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008112	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-100-LTR	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008118	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-100-LTR	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M
3300012712	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES121 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012724	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES138 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012731	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES145 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012733	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES131 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012734	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES144 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300016683	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES128 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020509	Freshwater microbial communities from Lake Mendota, WI - 14SEP2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020511	Freshwater microbial communities from Lake Mendota, WI - 15JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020534	Freshwater microbial communities from Lake Mendota, WI - 12JUL2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020558	Freshwater microbial communities from Lake Mendota, WI - 13OCT2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29586_10183001	3300002276	Freshwater	FSTKFKLKMVSDVLLLSYFDKIWLILTGEPGRALACLYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ*
B570J29586_10189001	3300002276	Freshwater	MKIVSDVLHLSYLDKFGLRVTVEAGQALAVLYSEARLYKGPSLAGPSQSATTRSTGNISVWIQKVATATHVEQ*
B570J40625_1003384841	3300002835	Freshwater	MKMDSDVLHFSYFDKIYLILTGELWRALACLYSEARLYKGARAASLSQSTTLHSTGNTSV
Ga0071351_10148612	3300005044	Freshwater, Plankton	MKVDSDVLLLSYLDKICLTLTGDLRRALACLYSEARLYKGAREATRPQSTTLHSTGNTSV
Ga0071351_10270641	3300005044	Freshwater, Plankton	MKVVSDVLLLSYLDKICLTLTGELWRALACLYSEARLYKGAREASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0071351_10340611	3300005044	Freshwater, Plankton	MKMDNDVLLLCYLDKIRLTLTGDLWRALASLYSEGEAIQYKGARMATCPQSTTLHSTGNISV*
Ga0071350_11184481	3300005069	Freshwater	MKVDSDVLLRSYFDKICQILTGDLWRALACLYNEARLYKGAREATRPQSTTLHSTGNISV
Ga0071350_11354493	3300005069	Freshwater	MDSDVLLLSYLDKICLILTGELWRALACLYSEARLYLGAREVPLSQSTTLHSTGNTLGERRKSATATHVEQ*
Ga0068879_16945261	3300005420	Freshwater Lake	MVSAQFNKKVDSDVLLLSYLDKICLTLTGDLPVRRALACLYSEARLYKGPREATRPQW
Ga0068877_102720773	3300005525	Freshwater Lake	VLLLSYLDKIWLTLTGEPGRALACFYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0068877_105668341	3300005525	Freshwater Lake	MDSDVLLLSYLNKICLILTGEPGRALAYLYSEARLYKGARVASLSQLTTPRSTGNISVREEKLATATHVEQ*
Ga0068877_107488411	3300005525	Freshwater Lake	MKVDSDVLLLSYLDKICLILTGELWHALACLYSEARLYKGAREAPLSQSTTLHSTGNTSV
Ga0068876_102381844	3300005527	Freshwater Lake	MKVDSDVLLLSYLDKICLALTGELWRALACLYSEARLYKGAREASLSQSTTLHPTGNISV
Ga0068876_105484851	3300005527	Freshwater Lake	MKVDSDVQLLFYFKKDLPNLTGDLWRALACLYSEARLYKGAREATRPQSTTLHSTGNISV
Ga0068876_105760091	3300005527	Freshwater Lake	MVSDVLLLSYLDKIWLLLTGEPGRALACLYSEARLYKGAREASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0068872_101112674	3300005528	Freshwater Lake	MDSDVLLLSYLDKIWLTLTGEPGRALACFYSEARLYKGARMASLSQSTTPRSTGNISVREEKS
Ga0068872_102090512	3300005528	Freshwater Lake	MDSDVLLLSYLDKICLILTSDLWRALACLYSEARLYKGPREATHPQSTTLYSTGG*
Ga0068872_103681891	3300005528	Freshwater Lake	MKVVSDVLLLSYLDKICLTLTGELWRALACLYSKARHYKRAREASLSQLTTRSTGNISVREEKSATATHVEQ*
Ga0068872_103974711	3300005528	Freshwater Lake	MKMDNDVLLLCYLDKIRLTLTGDLWRALASLYSEGEAIQYKAARMATCPQSTTLHSIGNISATATHVEQ*
Ga0068872_105515922	3300005528	Freshwater Lake	VLLLSYLDKICLILTGELWRALACLYSEARLYKGAREASLSQSTTLHSTGNTSV*
Ga0068872_106143611	3300005528	Freshwater Lake	DVLLLCYLDKIRLTLTGDLWRALASLYSEGEAIQYKGARMATCPQSTTLHSTGNISV*
Ga0114338_11242471	3300008105	Freshwater, Plankton	MKVDSDVLLLSYLDKICLILTGELWHALACLYSEARLYKGAREASLSQSTTLHSTGNTSV
Ga0114338_11367263	3300008105	Freshwater, Plankton	MKVVSDVLLLSYLDKICLTLTGELWRALACLYSEARHYKRAREASISQLTTRSTGNISAREEKSATATHVEQ*
Ga0114338_11957562	3300008105	Freshwater, Plankton	MKMDSDVLLLSYLDKICLILTGELWPALACLYSEASLYKEAREAPLSQSTTLHSTGN
Ga0114338_12078441	3300008105	Freshwater, Plankton	MKVDSDVLLLSYLDKICLALTGELRRALACLYSEARLYKGAREASLSQSTTLHPTGNISV
Ga0114338_12447081	3300008105	Freshwater, Plankton	MKVDSDVLLLSYFDKIYLILTGELWRALACLYSEARLYKGARVASLSQSTTLHSTGNTSV
Ga0114341_102790491	3300008108	Freshwater, Plankton	MVSDVLLLSYLDKIWLILTGEPGRALACLYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0114341_102947541	3300008108	Freshwater, Plankton	KMKVDSDVLLLSYLDNICLTLTGELWRALACLYSEARLYKGARMASLSLSTTPRSTGNISVREEKSATATHMEQ*
Ga0114341_104018502	3300008108	Freshwater, Plankton	MVSAQFNKKVDSDVLLLSYLDKVCLIFTGEPGRALAYLYSEARLYKGARAASLSQSTTHYILQATPLCERRKSATATHVEQ*
Ga0114341_104497971	3300008108	Freshwater, Plankton	MVSAKFKLKMDSDVLLLSYLDKICLILTREPGRALAYLYSEVRLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0114345_10069161	3300008112	Freshwater, Plankton	MKMDSDVLHFSYFDKIYLILTGELWRALACLYSEARLYKGARAASLSQSTTLHSTGNTS
Ga0114345_10077429	3300008112	Freshwater, Plankton	MDSDVLLLSYLDKIWLILTGEPGRALAYLYSEARLYKGARVASLSQLTTPRSTGNISVREEKLATATHVEQ*
Ga0114345_10210651	3300008112	Freshwater, Plankton	MLLLSYLDKICLILTGEPGRALAYLYSEARPYKGAREASLSQSTTLHSTCNTSVCEEKSAIATHVEQ*
Ga0114345_10577772	3300008112	Freshwater, Plankton	MKVVSDVLLLSYFDKICLTLTGELWRALACLYCEVGLYKVAREGSLSKSTTLNSTGNTSV
Ga0114345_10588441	3300008112	Freshwater, Plankton	MKVDSDVLLLSYLDKICLTLTGDLWRALACLYSEARLYKGPREATRPQSTTLHSTGN
Ga0114345_10850351	3300008112	Freshwater, Plankton	MDSDVLLLSYLDKICLILTGEPGRALAYLYSEARLYKGARVASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0114345_11292981	3300008112	Freshwater, Plankton	MVSDVLLLSYLDKIGLILTGEAGQASVYLYSEARLYKGARLAVLSQSATTRSTGN
Ga0114345_11651511	3300008112	Freshwater, Plankton	MDSDVLLLSYLDKIWLTLTGEPGRALACLYSEARLCKGARMASLSQSTTPRSTGNISMREEKLAKATHVEQ*
Ga0114345_12857552	3300008112	Freshwater, Plankton	MKVVSDVLLLSYLDKICLTLTGELWRALACLYSKARHYKRAREASLSQLTTRSTGNISVREEKSATATHVE
Ga0114345_12931491	3300008112	Freshwater, Plankton	MKVVSDVLLLSYLDKICLTLTGELWRALACLYRKARHYKRAREASLSQLTTRSTGNISVREEKSATATHVE
Ga0114348_10181793	3300008115	Freshwater, Plankton	MKMDSDVLLLSYFDKICLILTGELWRALACLYSEARLYKGARAASLSQSTTLHSTGNTSV
Ga0114352_10099553	3300008118	Freshwater, Plankton	MDSDVLLLSYLDKIWLTLTGEPGRALACFYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0114352_10629852	3300008118	Freshwater, Plankton	MKVVSDVLLLSYLDKICLTLTGELWRALACLYSEARHYKRAREASLSQLTTRSTGNISVREEKSATATHVEQ*
Ga0114352_11132371	3300008118	Freshwater, Plankton	MVSDVLLFSYFDKIWLILTGEPGQASAYLYSEVRLYKGAREASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0114352_11144831	3300008118	Freshwater, Plankton	MKMDSDVLLLSYLDKIYLILTGELWRALACLYSEARLYKGARAASLSQSTTLHSTGNTSV
Ga0114349_10272111	3300008263	Freshwater, Plankton	MVSDVLLLSYLDKIGLTLTDEAGQASACLYSEARLYKGARMAPLSQSTTTRYTDNISVGEESRPLQHT*
Ga0114349_10623753	3300008263	Freshwater, Plankton	MVSDVLLLSYLDKIWLILTGEPGRALACLYCEARLYKGARTASISQSTTPCSTGNSSVSEENRP
Ga0114349_11360921	3300008263	Freshwater, Plankton	MKMDSDVLLLSYLDKICLILTGELWRALACLYSEARLYKGARAASLSQSTTLHSTGNTSV
Ga0114349_12526421	3300008263	Freshwater, Plankton	MVSDVLLLSYLDKISLNLKDEAGQASACLYSEARLYKGARMAPLSQLTTTGSTGNISVGERKSATATHVEQ*
Ga0157598_12475941	3300012712	Freshwater	MDSDVLLLSYLDKIWLIFTGEPGRALACFYSEARLYKGARMASLSQSTTPRSTGNISVREEKS
Ga0157611_10129711	3300012724	Freshwater	MKVDSDVLLLSYLGKICLILTGEPGRALACLYSETRLYKGARAASLSQSTTPRSTGNISVREEKSATATHVEQ*
Ga0157616_11875941	3300012731	Freshwater	SAQFNKKVDSDVLLLSYLDKICLTLNGDLRRALACLYSEARLYKGPREATRPQWTTLHSTGNISM*
Ga0157606_11864932	3300012733	Freshwater	VLLLSYLEKIGLSLTVEAGQALAYLYSEARLYKGARLAGLSQSATTRSTGNISVRTQKVDHSNTR
Ga0157606_13014751	3300012733	Freshwater	KVDSDVLLLSYLDKICLTLNGDLRRALACLYSEARLYKGPREATRPQSTTLHSTGNISM*
Ga0157615_13369771	3300012734	Freshwater	YLDKICLILTGEPGRALAYLYSEARPYKGAREASLSQSTTPRSIGNISVREEKSATATHVEQ*
Ga0164293_106064871	3300013004	Freshwater	MKMDNDVLLLCYLDKIRLTLTGDLWRALVSLYSEGEAIQYKGARMATCPQSTTLHSTGNISV*
Ga0164292_107785742	3300013005	Freshwater	MKVDSDVLLLSYLDKICLTLTGDPGRALACLYSEARLYKGTREASLSQSTTLHPTGN
Ga0164292_109386642	3300013005	Freshwater	MVSDVLLLSYFDKIGLSLTGEAGQASAYLYSEARLYKGARLGGLSQSATTRSTGKISVRIKKVGHSN
Ga0180042_1549591	3300016683	Freshwater	MVSAQFNMKVDSDVLLLSYLDKICLILTGEPGRALAYLYSEARLYNGARAASLSQSTTPRSTGNISVREEKSATATHVEQ
Ga0208594_10226261	3300020509	Freshwater	FKMKMDSDVLLLSYLDKICLILTGDLRRTLACLYSEARLYKGAREATRPQSTTLHSTGNISV
Ga0208593_10242171	3300020511	Freshwater	MDSDVLLLSYLDKICLILTGEPGRALAYLYSEARLYKGARAASLSQSTTPRSTGNISVREEKSATATHVEQ
Ga0208596_10501741	3300020534	Freshwater	MKMDSDVLLLSYLDKIYLILTGELWRALACLNSEARLYKGARAASLSQSTTLHSTGNTSV
Ga0208362_10694751	3300020558	Freshwater	EQFYAKFNMKVDSDVLLLSYLDKICLTLTGDLRRALACLYSEARLYKGPREATRPQSTTLHYTGNISM
Ga0209972_101779151	3300027793	Freshwater Lake	FNMKVDSDVLLLSYLGKICLILSGDLRRALACLYREARLYKGAREATRPQSTTLHSTGKTSV
Ga0209972_102657831	3300027793	Freshwater Lake	YLDKIRLTLTGDLWRALASLYSEGEAIQYKGARMATCPQSTTLHSKGNISV
Ga0334980_0266839_362_550	3300033816	Freshwater	MKMDNDVLLLCYLDKIRLTLTGDLWRALASLYSEGEAIQYKGARMGTCPQSTTLHSTGNISV
Ga0334980_0303508_343_546	3300033816	Freshwater	MLLLSYLDKIWLTLTGEPGRALACFYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ
Ga0334994_0260220_718_900	3300033993	Freshwater	MVSDVLLLSYFDKIRLILTGEAGQALAYLYSEARLYKGASLAPLSQSTTPRSTGNISVGE
Ga0334994_0430368_372_590	3300033993	Freshwater	MKVVSDVLLLSYFNKICLTLTGELWRALACLYSKARHYKRAREASLSQLTTRSTGNISVREEKSATATHLEQ
Ga0334996_0246707_51_239	3300033994	Freshwater	MKMDNDVLLLCYLDKIRLTLTGDLWRALASLYSEGDAIQYKGARMATCPQSTTLHSTGNISV
Ga0335003_0188550_812_997	3300033995	Freshwater	MVSDVLLLSYLDKIGLILTGEAGQASACLYSEARIYKGARMAPLSQSTTTRSTGNISVGEES
Ga0334986_0277842_324_512	3300034012	Freshwater	MKMDNDVLLLCYLDKIRLTLTGDLWRALVSLYSEGEAIQYKGARMATCPQSTTLHSTGNISV
Ga0334986_0618683_173_388	3300034012	Freshwater	MDSDVLLLSYLDKIWLILTGEPGRALAYLYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ
Ga0334985_0287633_882_1034	3300034018	Freshwater	MDSDVLLLSYLDKICLILTSDLWRALACLYSEARLYKGPREATRPQSTTLH
Ga0334985_0529136_1_204	3300034018	Freshwater	SFYAQFNMKVDSDVLLLSYLGKICLILSGDLRRALACLYREARLYKGAREATRPQSTTLHSTGKTSV
Ga0335002_0562540_336_554	3300034020	Freshwater	MKVVSDVLLLSYLDKICLTLTGELWRALACLYSKARHYKRAREASLSQLTTRSTGNISVREEKSATATHVEQ
Ga0335021_0057090_587_802	3300034023	Freshwater	MDSDVLLLSYLDKIWLTLTGEPGRALACFYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ
Ga0335021_0684691_1_180	3300034023	Freshwater	MKVDTDVLLLSYLDKICLTLTGDLRQALACLYSEARLCKGPRTATRPQSTTLHSTGNISV
Ga0335001_0276508_3_179	3300034064	Freshwater	MKVDSDVLLLSYLDKICLTLTGDLRRALACLYSEARLYKGPREATRPQSTTLHSTGNIS
Ga0335001_0481951_2_208	3300034064	Freshwater	LSFYAQFNMKVDSDVLLLSYLGKICLILSGDLRRALACLYREARLYKGAREATRPQSTTLHSTGKTSV
Ga0335001_0661722_156_371	3300034064	Freshwater	MDSDVLLLSYLDKIWLILTGEPGRALAYLYSEARLYKGARVASLSQSTTPRSTGNISVREEKLATATHVEQ
Ga0335001_0755335_3_197	3300034064	Freshwater	MDSDVLLLSYLDKIFLILTGELWRALACLYSEARLYLGAREVPLSQSTTLHSTGNTLGERRKSAT
Ga0335019_0658611_377_592	3300034066	Freshwater	MDSDVLLLSYLDKIWLILTGEPGRALAYLYSEARLYKGAREASLSQSTTPRSTGNISVREEKLATATHVEQ
Ga0335019_0675225_162_365	3300034066	Freshwater	MLLLSYLDKICLILTGEPGRALAYLYSEARPYKGARAASLSQSTTLHSTCNTSVCEEKSAIATHVEQ
Ga0335019_0810108_1_150	3300034066	Freshwater	MKVDSDVLLLSYLNKVCLTLTGDLRRALACLYSEARLYKGVREASLSQST
Ga0335020_0002012_5743_5919	3300034082	Freshwater	MDSDVLHFSYFDKIYLILTGELWRALACLYSEARLYKGARAASLSQSTTLHSTGNTSV
Ga0335020_0179219_138_353	3300034082	Freshwater	MTDEWFYAKFNIKVDSDVLLLSYLDKICLDLTGELRPALACLYSEARLYKGAREASLSQSTTLHPTGNVSV
Ga0335020_0266803_654_842	3300034082	Freshwater	MDSDVLLLSYLDKVCLIFTGEPGRALAYLYSEARLYKGARAASLSQSTTHYILQATPLWVWRK
Ga0335020_0443902_413_619	3300034082	Freshwater	DVLLLSYLDKIWLILTGEPGRALACLCSEVRLYKGARMASLSQSTTPRSTGNISVHEEKSATATHVEQ
Ga0335020_0480769_153_335	3300034082	Freshwater	MKMDSDVLLLSYLDKIYLILTGELWRALACFYSEARLYKGAREASLSQSTTLHSTGNTSV
Ga0335012_0434377_463_633	3300034093	Freshwater	MDSDVLLLSYLDKIGLILTGELWRAFACLYSEARLYKGATESLSLSTTPRSTGNTSV
Ga0335012_0557934_3_197	3300034093	Freshwater	MDSDVLLLSYLDKIWLILTGEPGRALAYLYSEARLYKGAREASLSQSTTPRSTVNGRTYFVVNMF
Ga0335012_0571626_359_526	3300034093	Freshwater	MVSDVLLLSYLDKIWLLLTGEPGRALACLYSEARLYKGAREASLSQSTTPHSTGNI
Ga0335027_0829130_358_531	3300034101	Freshwater	MVSDVLLLSYLDKIGLSLTDEAGQASACLYSEARLYKGARMAPLSQSTTTRSTGNISV
Ga0335037_0307949_513_734	3300034107	Freshwater	MKVVSDVLLLLCLHKFDLWVTVEAGQASACLYSEARLYKGARMAPLSQSTTTRSTGNISVGERKSATATHVEQ
Ga0335051_0484360_434_577	3300034109	Freshwater	MKVDSDVLLLSYLDKICLTLTGDLRRALACLYSEARLYKGPREATRPQ
Ga0335066_0604146_249_467	3300034112	Freshwater	MKVVSDVLLLSYLDKICLTLTGELWRALACLYSEARHYKRAREASLSQLTTRSTGNISVREEKSATATHVEQ
Ga0335068_0363179_1_207	3300034116	Freshwater	MKVDSDVLLLSYLGKICLILSGDLRRALACLYREARLYKGAREATRPQSTTLHSTGKTSVWAKEVSHSN
Ga0335033_0354554_587_733	3300034117	Freshwater	MDSDVLLLSYLDKIGLILTGELWRAFACLYSEARLYKGATESLSQSTTP
Ga0335033_0490491_2_184	3300034117	Freshwater	DKIWLILTGEPGRALACLYSEARLYKGARMASLSQSTTPRSTGNISVREEKSATATHVEQ
Ga0335033_0567985_366_530	3300034117	Freshwater	DVLLLSYLDKIGLILTGELWRAFACLYSEARLYKGATESLSLSTTPRSTGNTSV
Ga0335033_0577200_163_378	3300034117	Freshwater	MDIDVLLLSYLDKICLILTGEPGQALAYLYSEARLYKGARAASLSQSTTPRSTGNISVREEKTATATHMEQ
Ga0335065_0142506_33_248	3300034200	Freshwater	MDSNVLLLSYFDKICLILTGEPGRALAYLYSEARLYKGARAASLSQSTTPRSTGNISVREEKSATATHVEQ
Ga0334997_0296534_825_1043	3300034280	Freshwater	MVSDVLLLSYLDKIRLILTGEAGQALACLYSEARLYNGARTASLSQSTTPRSTGNISVSEESRPLQHMWNSKG
Ga0334997_0523832_229_390	3300034280	Freshwater	MLLLSYLDKIGLILTGELWRAFACLYSEARLYKGATESLSLSTTPRSTGNTSV
Ga0334997_0703508_3_176	3300034280	Freshwater	MDSDVLLLSYLDKIWLSLTGEPGRALAYLYSEARLYKGARVASLSQLTTPRSTGNISV
Ga0334997_0761552_374_583	3300034280	Freshwater	MDSDVLLLSYLDKICLILTGEPGHALAYLYSEARLYKGARAASLSQTTTLHSTGNTSVCVKEVGHSNTRG
Ga0335013_0657258_210_425	3300034284	Freshwater	MVSDVLLLSYLDKIGLTLTGEAGQASAYLHSEARLYKGARMAPLSQSTTTRSTGNISVGERKSATATHVEQ
Ga0335039_0440936_1_171	3300034355	Freshwater	MDSDVLLLSYLDKIWLILTGEPGRALAYLYSEARLYKGARAASLSQSTTPRSTGNIS
Ga0335048_0105441_1473_1685	3300034356	Freshwater	MVSDVLLLSYLDKIRLILTGEAGQALACLYSEARLYKGARMAPLSQSTTTRSTGNISLGEESRPLQHTWNS
Ga0335048_0327409_180_395	3300034356	Freshwater	MVSDVLLLSYLDKIWLLLTGEPGRALACLYSEARLYKGAREASLSQSTTPHSTGNISVREEKSATATHGEQ
Ga0335064_0950068_114_329	3300034357	Freshwater	MVSDVLLLSYLDKIWLLLTGEPGRALACLYSEARLYKGAREASLSQSTTPHSTGNISVREEKSATATHVEQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083682

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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