Metagenome Family F083664

Overview

Basic Information

• Family ID: F083664
• Family Type: Metagenome
• Number of Sequences: 112
• Average Sequence Length: 41 residues
• Representative Sequence: DELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD
• Number of Associated Samples: 13
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 13
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden (90.425 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (75.893 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 54.55%
  β-sheet: 0.00%
  Coil/Unstructured: 45.45%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01359	Transposase_1	9.82
PF05585	DUF1758	0.89
PF12774	AAA_6	0.89
PF01498	HTH_Tnp_Tc3_2	0.89
PF05380	Peptidase_A17	0.89
PF00795	CN_hydrolase	0.89
PF05699	Dimer_Tnp_hAT	0.89
PF10152	CCDC53	0.89
PF00078	RVT_1	0.89
PF00146	NADHdh	0.89
PF13358	DDE_3	0.89
PF08393	DHC_N2	0.89
PF00462	Glutaredoxin	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.89
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.89

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Fungi	Host-Associated → Fungi	100.00%

Category

Habitat	Taxonomy	Distribution
Mycelium	Host-Associated → Fungi → Mycelium	100.00%

Type

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	100.00%

Habitat

Habitat	Taxonomy	Distribution
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	90.43%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	9.57%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300008519	Neotropical army ants gut microbial communities from Monteverde, Costa Rica - Neivamyrmex summichrasti Gut microbial communities of Neivamyrmex summichrasti	Environmental
3300012058	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ019 MetaG	Host-Associated
3300012060	Attine ant fungus gardens microbial communities from New York, USA - TSNY021 MetaG	Host-Associated
3300012074	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ085 MetaG	Host-Associated
3300012077	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ013 MetaG	Host-Associated
3300012086	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ033 MetaG	Host-Associated
3300012997	Fungus gardens microbial communities from leaf cutter ant in Botucatu, State of S?o Paulo, Brazil - Atta capiguara ACBM3	Host-Associated
3300012998	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3	Host-Associated
3300012999	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM1	Host-Associated
3300013001	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM3	Host-Associated
3300013002	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM2	Host-Associated
3300013023	Fungus gardens microbial communities from leaf cutter ant in Botucatu, State of S?o Paulo, Brazil - Atta bisphaerica ABBM1	Host-Associated
3300013025	Fungus gardens microbial communities from leaf cutter ant in Botucatu, State of S?o Paulo, Brazil - Atta bisphaerica ABBM2	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0111037_10163722	3300008519		MLDINFAKTEKELAEQLGVTQQAISVRLHTMGKVQKEGR*
Ga0111037_1042629	3300008519		LQVLLDINFAQTEKELAKQLGVTQQAISVHLHTMG*
Ga0111037_1043157	3300008519		LQALLDINFAQTEKELADQLGITQQAISVRLHTMEKVQKEGR*
Ga0111037_1056412	3300008519		LRARHPQKIETDELQALLDINSAQTEKELADQLDVAQQAISVRLHTM*
Ga0111037_1064394	3300008519		LQALLDINSAQTEKELVKQFGVTQQAISVRLYTMGKVQKEDK*
Ga0111037_10670810	3300008519		LQALLDINSAQTEKELAEQLGVTQQVIPLHTIGKVQKEGR*
Ga0111037_1075783	3300008519		LQALLDINSAQTEKELAEQLSITQQAISVRLHTMGKV*
Ga0111037_1077094	3300008519		LQALLDINSAQTEKKFAEQLGVTQQAISVRLHTMRKV*
Ga0111037_1079641	3300008519		LQALLNINFAQTEKELAEQLDVTQQAISVCLYTMEKVQKEDR*
Ga0111037_1080141	3300008519		MDELQALLDINFAQTEKELTEQLGVMQQTISVHLHTMGKVQKEYR*
Ga0111037_1090301	3300008519		LQALLDINSAQTEKELAKQLGITQQAIFVRLHMMGKVQKEGRFR*
Ga0111037_1098803	3300008519		LQALLDINSAQTEKEFAEQLGVTQQAISVRLHMIGNV*
Ga0111037_1109813	3300008519		LQALLDTNFAQMENEPAEQLGITQQAISVRLHMMGKVQKEGRMGSA*
Ga0111037_1112842	3300008519		LQALLDINSAQTEKELAEQLNVTQQAISVRSHTIGKIQKKGRFA*
Ga0111037_1145672	3300008519		LQILLDINSAQTEMELAEQLGVTKQAISVRLHTIGKVQKEG*
Ga0111037_1150802	3300008519		MNDDAGRPQKIEMNELQGLLDINSAQIEKELAEQLGLTQQAISVRLHTMGKV*
Ga0111037_1202772	3300008519		MLDINSAQIEKELSEQLGVTQQAISIRLHTIGKVQKEDR*
Ga0111037_1202792	3300008519		MLDINSAQTEKELAEQLGVMQQAISIRLHTIGKVQKEGR*
Ga0153935_10185781	3300012058	Attine Ant Fungus Gardens	EKIETDELQALLDINSAQTEKELAEQLGVTQQAISVRLHTIKD*
Ga0153935_10365541	3300012058	Attine Ant Fungus Gardens	ELQALLDINSAQTEKELAEQLGVTQQAISVRLFFNKD*
Ga0153935_10521782	3300012058	Attine Ant Fungus Gardens	LQALLDINSAQTEKELAEQLGVTQQAISVRLHTNFTKK
Ga0153937_10532762	3300012060	Attine Ant Fungus Gardens	TDELQALLDINSAQTEKELAEQLGVTQQAISVRLL*
Ga0154001_10687122	3300012074	Attine Ant Fungus Gardens	PEKIETDELQALLDINSAQTEKELAEQLGVTQQAISVRLL*
Ga0153929_10345513	3300012077	Attine Ant Fungus Gardens	PEKIETDELQALLDINSAQTEKELAEQLGVTQQAISVRLHNNKD*
Ga0153929_10793121	3300012077	Attine Ant Fungus Gardens	ETDELQALLDINSAQTEKELAEQLGVTQQAISVRL*
Ga0153929_11099431	3300012077	Attine Ant Fungus Gardens	LQALLDINSAQTEKELAEQLGVTQQAISVRLHYIIRLYY*
Ga0153949_11455471	3300012086	Attine Ant Fungus Gardens	EKIETDELQALLDINSAQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157359_11381082	3300012997	Fungus Garden	RAGRPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVTITYDYIR*
Ga0157362_10059644	3300012998	Fungus Garden	LQALLDINSTQTEKELAEQLGVTQQAISVTITYDKD*
Ga0157362_10086226	3300012998	Fungus Garden	RAGRPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISV*
Ga0157362_10245984	3300012998	Fungus Garden	DELQALLDINSTQTEKELAEQLGVTQQAISVRLHTIKIEF*
Ga0157362_10838952	3300012998	Fungus Garden	GRPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRL*
Ga0157362_10963523	3300012998	Fungus Garden	IETDELQALLNINSTQTEKELAEQLGVTQQAISV*
Ga0157362_11127811	3300012998	Fungus Garden	EKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157362_11546531	3300012998	Fungus Garden	EKIETDELQALLDINSTQTEKELAEQLGVTQQAISV*
Ga0157363_10035811	3300012999	Fungus Garden	QALLDINSTQIEKELAEQLGVTQQAIFFRLFLNKD*
Ga0157363_10043471	3300012999	Fungus Garden	DELQALLDINSTQTEKELAEQLDVTQQAISVRLHTNKD*
Ga0157363_10058508	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10067658	3300012999	Fungus Garden	PEKIETDELQALLDINSTQTEKELAGQLGVTQQAISVRLHTNKD*
Ga0157363_10076871	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLSVTQQAIFFRLFLNKD*
Ga0157363_10081091	3300012999	Fungus Garden	PEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHNKD*
Ga0157363_100861511	3300012999	Fungus Garden	QALLDINSTQTEKEFAEQLGVTQQAIFFRLFLNKD*
Ga0157363_100877510	3300012999	Fungus Garden	PEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHINKD*
Ga0157363_10151591	3300012999	Fungus Garden	ELQALLDINSMQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10160661	3300012999	Fungus Garden	DELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10195031	3300012999	Fungus Garden	ALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10277551	3300012999	Fungus Garden	PEKIETDELQALLDINSTQTEKELAEQLGVTQQAISIRLHMNKD*
Ga0157363_10304021	3300012999	Fungus Garden	DELQALLDINSTQTEKELAQLGVTQQAISVRLHTNKN*
Ga0157363_10345491	3300012999	Fungus Garden	SRAGRPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10381954	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLGVMQQAISVRLHTNKD*
Ga0157363_10384556	3300012999	Fungus Garden	ESRAGRPEKIETDELQALLDINSMQTEKELAEQLGVTQQAITVRLHTNKD*
Ga0157363_10391557	3300012999	Fungus Garden	EKIETDEALLDINSMQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10395941	3300012999	Fungus Garden	PEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10400059	3300012999	Fungus Garden	SRAGRPEKIETDELQALLDINFTQTEKELAEQLGVTQQAISIRLHMNKD*
Ga0157363_10402183	3300012999	Fungus Garden	ELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10410971	3300012999	Fungus Garden	TDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTYKD*
Ga0157363_10419503	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLGVTQQAISVRLYTNKD*
Ga0157363_10448951	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLAVTQQAISVRLHTNKD*
Ga0157363_10490571	3300012999	Fungus Garden	EKIETDELQALLDINSTQIEKELAEQLGVTQQAISV*
Ga0157363_10553831	3300012999	Fungus Garden	GHPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLIHTNKD*
Ga0157363_10679862	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLGVTQQAISVRLHRNKD*
Ga0157363_10694423	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLGVTQQAISVRLHMNKD*
Ga0157363_10697831	3300012999	Fungus Garden	GRPEKIETDELQALLDINFTQTEKELAEQLGVTQQAISVRLYTNKD*
Ga0157363_10769161	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLDVTQQAISVRLHTNKD*
Ga0157363_10772831	3300012999	Fungus Garden	QALLDINSTQTERELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10776703	3300012999	Fungus Garden	PEKIETDELQALLDINSTQTEKELAEQLGVTQQAISDYIRLHTNKD*
Ga0157363_10819522	3300012999	Fungus Garden	EKIETDELQALLDINSTQTEKELAEQLGVTQQAISIRLHTNKD*
Ga0157363_10820462	3300012999	Fungus Garden	LQALLDINSTQTEKELAEQLSVTQQAISVRLHTNKD*
Ga0157363_10895591	3300012999	Fungus Garden	QALLDINSTQIEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_10897131	3300012999	Fungus Garden	EKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTID*
Ga0157363_10916511	3300012999	Fungus Garden	IETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHMNKD*
Ga0157363_11002832	3300012999	Fungus Garden	DELQALLDINSTQTEKELAKQLGVTQQAISVRLHTNKD*
Ga0157363_11003171	3300012999	Fungus Garden	QALLDINSTQTEKELAEQLGVTQQGISVRLHTNKD*
Ga0157363_11082362	3300012999	Fungus Garden	GRPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLYTNKD*
Ga0157363_11256053	3300012999	Fungus Garden	ETDELQALLDINSTQTEKELAKQLGVTQQAISVRLHTNKD*
Ga0157363_11368381	3300012999	Fungus Garden	GRPEKIETDELQALLDINSTQTEKELAEQFGVTQQAISVRLYTNKD*
Ga0157363_11464022	3300012999	Fungus Garden	LQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_11472111	3300012999	Fungus Garden	ESRAGRPEKIETDEWQALLDINSTQTEKELAEQLGVTQQAISVRFHTNKD*
Ga0157363_11620391	3300012999	Fungus Garden	LQALLDINSTQTEKELAEQLGASHFRTITQQAISVRLHTNKD*
Ga0157363_11671841	3300012999	Fungus Garden	RAGRPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157363_12038631	3300012999	Fungus Garden	KIETDELQALLDINSTQTEKELVEQLGITQQAISVRLHTNKD*
Ga0157363_12217011	3300012999	Fungus Garden	QALLDINSTQTEKELVEQLGVTQQAISVRLHTNKD*
Ga0157363_12235842	3300012999	Fungus Garden	ALLDINSTQTEKELAEQVGVTQQAISVRLHTNKD*
Ga0157365_100577301	3300013001	Fungus Garden	KIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157365_101139391	3300013001	Fungus Garden	LQALLDINSMQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157365_101351101	3300013001	Fungus Garden	DELQALLDINSTQTEKEFAEQLGVTQQAISIRLHTNKD*
Ga0157365_102172861	3300013001	Fungus Garden	PEKIETDELQALLDINSMQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157365_102884221	3300013001	Fungus Garden	QALLDINSTQTEKELAEQLGVTQQAISVRLHTYKD*
Ga0157365_103081451	3300013001	Fungus Garden	EKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLRTNKD*
Ga0157364_10035681	3300013002	Fungus Garden	TDELQALLDINSTQTEKELAEQLGVTQQAISVRLYTNKD*
Ga0157364_10224051	3300013002	Fungus Garden	GRPEKIETDELQALLDINSTQTEKELAEQLDVTQQAISVRLYTNKD*
Ga0157364_10224261	3300013002	Fungus Garden	TDELQALLDINSTQTERELAEQLGVTQQAISVRLHTNKD*
Ga0157364_10226751	3300013002	Fungus Garden	KIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHID*
Ga0157364_10279591	3300013002	Fungus Garden	PEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTYKD*
Ga0157364_10552351	3300013002	Fungus Garden	IETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157364_10678151	3300013002	Fungus Garden	PEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHRNKD*
Ga0157364_11061841	3300013002	Fungus Garden	RAGRPEKIETDELQALLDINSTQIEKELAEQLGVTQQAISV*
Ga0157364_11174382	3300013002	Fungus Garden	IETDELQALLDINSMQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157364_11204701	3300013002	Fungus Garden	DELQALLDINSTQTEKELAEQLGVTQQAIFVRLHMNKD*
Ga0157364_11237962	3300013002	Fungus Garden	RAGRPEKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLYTNKD*
Ga0157364_11508662	3300013002	Fungus Garden	LQALLDINSTQTEKELAEQLDVTQQAISVRLHTNKD*
Ga0157364_11524992	3300013002	Fungus Garden	ALLDINSTQTEKELAKQLGVTQQAISVRLHTNKD*
Ga0157364_11775331	3300013002	Fungus Garden	QALLDINSTQTEKELTEQLGVTQQAISVRLHTNKD*
Ga0157364_12146961	3300013002	Fungus Garden	ELQALLDINSTQTEKELAEQLGVTQQAISVRLHKNKD*
Ga0157364_12406051	3300013002	Fungus Garden	ETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNKD*
Ga0157366_10671221	3300013023	Fungus Garden	ETDELQALLDINSTQIEKELAEQLGVTQQAISVRLHTID*
Ga0157367_10454391	3300013025	Fungus Garden	LQALLDINSTQTEKELAEQLGVTQQAISVRLHTIHKD*
Ga0157367_10555461	3300013025	Fungus Garden	IETDELQALLDINSTQTEKELVEQLGVTQQAISV*
Ga0157367_10891231	3300013025	Fungus Garden	EKIETDELQALLDINSTQTEKELAEQLGVTQQAISVRLHTNI*
Ga0157367_11895501	3300013025	Fungus Garden	EKIETDELQALLDINSTQTEKELAEQLDVTQQAISVRLHTNKD*
Ga0157367_11996901	3300013025	Fungus Garden	LLDINSTQTEKELAEQLGVTQQAISVRLHTIKIEF*
Ga0157367_12143351	3300013025	Fungus Garden	LQALLDINSTQTEKELAEQLGVTQQAISVRLHTMGKV*