Metagenome Family F083608

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083608
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	39 residues
Representative Sequence	VAKLMEAAEGPGTALATLFEEEVVPPLPSADAEGPEP
Number of Associated Samples	65
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.43 %
% of genes near scaffold ends (potentially truncated)	79.46 %
% of genes from short scaffolds (< 2000 bps)	97.32 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (95.536 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (91.964 % of family members)
Environment Ontology (ENVO)	Unclassified (92.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (92.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.69% β-sheet: 0.00% Coil/Unstructured: 72.31%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00385	Chromo	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
All Organisms	root	All Organisms	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
cellular organisms	root	All Organisms → cellular organisms	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	3.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	3.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	1.79 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	1.79 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	1.79 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1.79 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1.79 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.54 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1.79 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005334\|Ga0068869_100924643	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	756	Open in IMG/M
3300005840\|Ga0068870_11312035	Not Available	527	Open in IMG/M
3300009176\|Ga0105242_11244794	Not Available	765	Open in IMG/M
3300013297\|Ga0157378_10260980	Not Available	1662	Open in IMG/M
3300013297\|Ga0157378_12693925	Not Available	550	Open in IMG/M
3300015267\|Ga0182122_1028988	Not Available	649	Open in IMG/M
3300015274\|Ga0182188_1016575	Not Available	709	Open in IMG/M
3300015275\|Ga0182172_1042136	Not Available	600	Open in IMG/M
3300015275\|Ga0182172_1043709	Not Available	594	Open in IMG/M
3300015275\|Ga0182172_1058588	Not Available	545	Open in IMG/M
3300015275\|Ga0182172_1063614	Not Available	532	Open in IMG/M
3300015276\|Ga0182170_1040263	Not Available	609	Open in IMG/M
3300015277\|Ga0182128_1043313	Not Available	600	Open in IMG/M
3300015279\|Ga0182174_1080878	Not Available	512	Open in IMG/M
3300015281\|Ga0182160_1014144	Not Available	825	Open in IMG/M
3300015281\|Ga0182160_1015770	Not Available	801	Open in IMG/M
3300015281\|Ga0182160_1020924	Not Available	743	Open in IMG/M
3300015285\|Ga0182186_1040542	Not Available	621	Open in IMG/M
3300015286\|Ga0182176_1052331	Not Available	588	Open in IMG/M
3300015288\|Ga0182173_1082804	Not Available	509	Open in IMG/M
3300015289\|Ga0182138_1035369	Not Available	658	Open in IMG/M
3300015291\|Ga0182125_1025565	Not Available	735	Open in IMG/M
3300015291\|Ga0182125_1060192	Not Available	577	Open in IMG/M
3300015291\|Ga0182125_1088266	Not Available	513	Open in IMG/M
3300015294\|Ga0182126_1091453	Not Available	510	Open in IMG/M
3300015295\|Ga0182175_1024754	Not Available	753	Open in IMG/M
3300015295\|Ga0182175_1073507	Not Available	551	Open in IMG/M
3300015296\|Ga0182157_1029352	Not Available	728	Open in IMG/M
3300015299\|Ga0182107_1014374	Not Available	894	Open in IMG/M
3300015300\|Ga0182108_1014687	Not Available	899	Open in IMG/M
3300015300\|Ga0182108_1026192	Not Available	763	Open in IMG/M
3300015300\|Ga0182108_1082167	Not Available	546	Open in IMG/M
3300015302\|Ga0182143_1054737	Not Available	613	Open in IMG/M
3300015302\|Ga0182143_1066758	Not Available	578	Open in IMG/M
3300015302\|Ga0182143_1071024	Not Available	567	Open in IMG/M
3300015302\|Ga0182143_1087749	Not Available	531	Open in IMG/M
3300015302\|Ga0182143_1089614	Not Available	527	Open in IMG/M
3300015303\|Ga0182123_1056219	Not Available	594	Open in IMG/M
3300015303\|Ga0182123_1064788	Not Available	570	Open in IMG/M
3300015303\|Ga0182123_1098648	Not Available	503	Open in IMG/M
3300015304\|Ga0182112_1018895	Not Available	830	Open in IMG/M
3300015304\|Ga0182112_1024129	Not Available	776	Open in IMG/M
3300015305\|Ga0182158_1049320	Not Available	631	Open in IMG/M
3300015308\|Ga0182142_1018318	Not Available	866	Open in IMG/M
3300015308\|Ga0182142_1099204	Not Available	527	Open in IMG/M
3300015308\|Ga0182142_1100421	Not Available	525	Open in IMG/M
3300015314\|Ga0182140_1090832	Not Available	543	Open in IMG/M
3300015322\|Ga0182110_1107744	Not Available	526	Open in IMG/M
3300015323\|Ga0182129_1048549	Not Available	654	Open in IMG/M
3300015323\|Ga0182129_1113892	Not Available	505	Open in IMG/M
3300015342\|Ga0182109_1180610	Not Available	546	Open in IMG/M
3300015342\|Ga0182109_1221737	Not Available	503	Open in IMG/M
3300015343\|Ga0182155_1191318	Not Available	534	Open in IMG/M
3300015344\|Ga0182189_1181695	Not Available	550	Open in IMG/M
3300015344\|Ga0182189_1204612	Not Available	525	Open in IMG/M
3300015344\|Ga0182189_1226012	Not Available	504	Open in IMG/M
3300015345\|Ga0182111_1093339	Not Available	726	Open in IMG/M
3300015345\|Ga0182111_1126382	Not Available	649	Open in IMG/M
3300015346\|Ga0182139_1162636	Not Available	591	Open in IMG/M
3300015347\|Ga0182177_1099297	Not Available	713	Open in IMG/M
3300015351\|Ga0182161_1224910	Not Available	539	Open in IMG/M
3300015351\|Ga0182161_1236596	Not Available	528	Open in IMG/M
3300015355\|Ga0182159_1269281	Not Available	565	Open in IMG/M
3300015355\|Ga0182159_1316268	Not Available	526	Open in IMG/M
3300017404\|Ga0182203_1073771	Not Available	652	Open in IMG/M
3300017407\|Ga0182220_1028988	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	723	Open in IMG/M
3300017409\|Ga0182204_1044251	Not Available	679	Open in IMG/M
3300017409\|Ga0182204_1114869	Not Available	509	Open in IMG/M
3300017410\|Ga0182207_1091375	Not Available	629	Open in IMG/M
3300017411\|Ga0182208_1032194	Not Available	767	Open in IMG/M
3300017411\|Ga0182208_1079480	Not Available	587	Open in IMG/M
3300017411\|Ga0182208_1083452	Not Available	578	Open in IMG/M
3300017413\|Ga0182222_1033332	Not Available	683	Open in IMG/M
3300017413\|Ga0182222_1045962	Not Available	629	Open in IMG/M
3300017413\|Ga0182222_1061829	Not Available	583	Open in IMG/M
3300017413\|Ga0182222_1086229	Not Available	534	Open in IMG/M
3300017415\|Ga0182202_1107298	Not Available	548	Open in IMG/M
3300017420\|Ga0182228_1058473	Not Available	672	Open in IMG/M
3300017420\|Ga0182228_1109003	Not Available	535	Open in IMG/M
3300017424\|Ga0182219_1062171	Not Available	647	Open in IMG/M
3300017425\|Ga0182224_1161813	Not Available	506	Open in IMG/M
3300017427\|Ga0182190_1038078	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	825	Open in IMG/M
3300017427\|Ga0182190_1108737	Not Available	581	Open in IMG/M
3300017430\|Ga0182192_1037922	Not Available	844	Open in IMG/M
3300017430\|Ga0182192_1125737	Not Available	563	Open in IMG/M
3300017430\|Ga0182192_1140673	Not Available	541	Open in IMG/M
3300017433\|Ga0182206_1072516	Not Available	647	Open in IMG/M
3300017433\|Ga0182206_1079269	Not Available	629	Open in IMG/M
3300017433\|Ga0182206_1150444	Not Available	512	Open in IMG/M
3300017436\|Ga0182209_1127767	Not Available	556	Open in IMG/M
3300017438\|Ga0182191_1159039	Not Available	527	Open in IMG/M
3300017442\|Ga0182221_1100609	Not Available	593	Open in IMG/M
3300017443\|Ga0182193_1048156	Not Available	806	Open in IMG/M
3300017443\|Ga0182193_1055866	Not Available	769	Open in IMG/M
3300017680\|Ga0182233_1087630	Not Available	569	Open in IMG/M
3300017682\|Ga0182229_1071335	Not Available	597	Open in IMG/M
3300017682\|Ga0182229_1104279	Not Available	506	Open in IMG/M
3300017683\|Ga0182218_1096791	Not Available	581	Open in IMG/M
3300017685\|Ga0182227_1096788	Not Available	571	Open in IMG/M
3300017685\|Ga0182227_1125914	Not Available	517	Open in IMG/M
3300017686\|Ga0182205_1115351	Not Available	576	Open in IMG/M
3300017689\|Ga0182231_1078390	Not Available	629	Open in IMG/M
3300017689\|Ga0182231_1094987	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	573	Open in IMG/M
3300017690\|Ga0182223_1011596	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	955	Open in IMG/M
3300017690\|Ga0182223_1083160	Not Available	563	Open in IMG/M
3300021060\|Ga0182232_1061400	Not Available	618	Open in IMG/M
3300025935\|Ga0207709_10347689	Not Available	1118	Open in IMG/M
3300026023\|Ga0207677_10603846	Not Available	963	Open in IMG/M
3300026118\|Ga0207675_101760885	Not Available	639	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	92.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	92.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	92.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.57%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	91.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068869_1009246431	3300005334	Miscanthus Rhizosphere	LTADKVVTKLLEAAEGPGTALATLFEEEVVPPPLSTDARDAEP*
Ga0068870_113120351	3300005840	Miscanthus Rhizosphere	KLMEAAEGPGTALATLFEEEVVPPLPSTGAEGPEP*
Ga0105242_112447941	3300009176	Miscanthus Rhizosphere	AEVVRLLEAAEAPGTALAKLFEEEVVPPAPAADL*
Ga0157378_102609803	3300013297	Miscanthus Rhizosphere	VAKLMEAAEGPGTALATLFEEEVVPPLPSADAEGPEP*
Ga0157378_126939251	3300013297	Miscanthus Rhizosphere	TKLMEAAEGLGAALAGLFEEEVVPPPPSADARDPAP*
Ga0182122_10289881	3300015267	Miscanthus Phyllosphere	VDAVVTKLMEAMEGPGSALAMLFEEEVVPPLPPAGVEGFEP*
Ga0182188_10165751	3300015274	Miscanthus Phyllosphere	MKLVEAAEAPGKALASLFEEEVVPPTPSADAGDPEF*
Ga0182172_10421361	3300015275	Miscanthus Phyllosphere	TKLMEAAEGPGTALATLFEEEVVPPLPSADAGGPKP*
Ga0182172_10437091	3300015275	Miscanthus Phyllosphere	DDEEADAAVAKLMEAAEGPGTALATLFEEEVVPLLPSADAEGPEP*
Ga0182172_10585881	3300015275	Miscanthus Phyllosphere	EEVTKLVEAAEGPGTTLAKLFKEEVVPPTSSADASDPEP*
Ga0182172_10636141	3300015275	Miscanthus Phyllosphere	EVMKLVEATEGPSMALAKLFEEEVVPPMPSADAGDPEP*
Ga0182170_10402631	3300015276	Miscanthus Phyllosphere	VVAKLMEAAEGPGTALAKLFEEEVVAPPPSADAGGLEP*
Ga0182128_10433131	3300015277	Miscanthus Phyllosphere	AVTKLMEATEGPGTTLATLFEEEVVPPLPSADAGGSEP*
Ga0182174_10808781	3300015279	Miscanthus Phyllosphere	DEEADEAVAKLIEAVEGPGTALAKLFEEEVVPPPPSADAGGPEP*
Ga0182160_10141442	3300015281	Miscanthus Phyllosphere	ANEAVAKLIEAAEGPSTALAKLFEEEVVPPPPSIDAGGPEP*
Ga0182160_10157701	3300015281	Miscanthus Phyllosphere	DEEEADAAVTRLMEAAEGPGTALATLFEEEVVPPLPSAGAEGPKP*
Ga0182160_10209241	3300015281	Miscanthus Phyllosphere	VLPDDDEEADAAVMKLMEATEGPGTALATLFEEEVVPPLPSAGAEGPEP*
Ga0182186_10405421	3300015285	Miscanthus Phyllosphere	VNKEVAKLMEAAEGLGMALAKLFEEEVVPPTSSADAGDPKA*
Ga0182176_10523311	3300015286	Miscanthus Phyllosphere	DDEEEADEAVTKLMEAAEGPGAALARLFEEEVVPPPPSADAGDPAP*
Ga0182173_10828041	3300015288	Miscanthus Phyllosphere	VMKLEEAAEAPGTALASLFEEEVVPPTPSADAGDLEF*
Ga0182138_10335262	3300015289	Miscanthus Phyllosphere	MVEAAEAPGTALARLFEEEVAPPTPSVDAGDPVF*
Ga0182138_10353691	3300015289	Miscanthus Phyllosphere	AAVTKLMEVAEGPGTALAMLFEEEVVPPLPSADAGGPEA*
Ga0182125_10255651	3300015291	Miscanthus Phyllosphere	EADEEVTKLMEAAEVPGAALASLFEEEVVPPAPVADAGDPEP*
Ga0182125_10588601	3300015291	Miscanthus Phyllosphere	MVEAAEAPGTALARLFEEEVAPPMPSVDAGDPVF*
Ga0182125_10601921	3300015291	Miscanthus Phyllosphere	LKLVEAAEAPGMELAWLFEEEVVPSTPTADAGDPEF*
Ga0182125_10882661	3300015291	Miscanthus Phyllosphere	MTKLMEAAEGPGAELAGLFEEEVVPPPPSADAGDPTP*
Ga0182126_10914532	3300015294	Miscanthus Phyllosphere	DEAVTKLMEAAEGPSTALAGLFEEEVVPPPPSADAGDPTP*
Ga0182175_10247541	3300015295	Miscanthus Phyllosphere	VVAKLIEAAEGPSTALAKLFEEEVVPPPPSADAGGPEP*
Ga0182175_10735071	3300015295	Miscanthus Phyllosphere	AEVAKLMEAAEAPGTALAKLYEEEVVPPAPAADP*
Ga0182157_10293521	3300015296	Miscanthus Phyllosphere	AKLMEAAEGPGTALATLFEEEVVPPLPSAGAEGAEP*
Ga0182107_10143741	3300015299	Miscanthus Phyllosphere	KLMEAAEGPGTALATLFEEEVVPPLPSADAEGPEP*
Ga0182108_10146871	3300015300	Miscanthus Phyllosphere	EVTKLMEVAEAPSTALASLFEEEVVPPAPTADAGDPEP*
Ga0182108_10261921	3300015300	Miscanthus Phyllosphere	KLMEAAEGPGMALAKLFEEVVVPPTPSADAGDPEP*
Ga0182108_10821671	3300015300	Miscanthus Phyllosphere	EEEADEAVTKLMEAAEGPGTALAGLFEEEVVPPPPSAEAGDPTP*
Ga0182143_10547371	3300015302	Miscanthus Phyllosphere	LMEATEGPGTALAKLFEEEVVPPTLSADAGDPEP*
Ga0182143_10667581	3300015302	Miscanthus Phyllosphere	VVKLMEAAKGPGTALAMLFEEEVVPPPPSADAGGPEP*
Ga0182143_10710241	3300015302	Miscanthus Phyllosphere	EVMKLAEAVEAPGAALAWLFEEEVVPPAPPIDAGHPVF*
Ga0182143_10877491	3300015302	Miscanthus Phyllosphere	LMEAAEGPDAALAGLFEEEVVPPSPSTDAGDPAP*
Ga0182143_10896141	3300015302	Miscanthus Phyllosphere	TKLMEAAEVPGAALASLFEEEVVPPAPAVDAGDPEP*
Ga0182123_10562191	3300015303	Miscanthus Phyllosphere	ADEEVTKLMEAAKVPGTMLASLFEEEVVPPAPAVDAGDLEP*
Ga0182123_10647881	3300015303	Miscanthus Phyllosphere	DEEANVAVAKLMEAAEGPGAALATLFEEEVVPPLPSAGAEGPEP*
Ga0182123_10986481	3300015303	Miscanthus Phyllosphere	DAAVTKLMEAAEGPGTALATLFEEEVVLPLPSTAAEGPKP*
Ga0182112_10188952	3300015304	Miscanthus Phyllosphere	LMEAVEGPGMALATLFEEEVVPPPPSADAGGPEP*
Ga0182112_10241291	3300015304	Miscanthus Phyllosphere	AEVVKLLEAAEAPGTALAGLFEEEVVPPTPAADP*
Ga0182158_10493201	3300015305	Miscanthus Phyllosphere	AVTKLMEAAEGPGTALATLFEEEVVPPLPSVGAEGPKP*
Ga0182142_10183182	3300015308	Miscanthus Phyllosphere	LPEANEEVAKLMESAEGPGTALAKLFEEEVVPPPPSADAGDPEP*
Ga0182142_10992041	3300015308	Miscanthus Phyllosphere	TKLMEAAEVPGAALASLFEEEVVPPAPAADAGDPKP*
Ga0182142_11004211	3300015308	Miscanthus Phyllosphere	VTKLMEVAEAPGTTLASLFEEEVVPPVPTANAGDPKP*
Ga0182140_10908321	3300015314	Miscanthus Phyllosphere	TKLMEAVEGLGTALAMLFEEEVVPPLPSADAGGPEP*
Ga0182110_11077442	3300015322	Miscanthus Phyllosphere	LMEAAEGPGTALATLFEEEVVPPLPSADAGGPKP*
Ga0182129_10485491	3300015323	Miscanthus Phyllosphere	LEEAAEALGMALASLFEEEVVPPTPSADAGDPEF*
Ga0182129_11138921	3300015323	Miscanthus Phyllosphere	EADKEVAKLMEAAKGLGTALAKLFEEEVVPPMPSTDARGPEP*
Ga0182109_11806101	3300015342	Miscanthus Phyllosphere	EVKKLEEVAEAPGTALASLFEEEVVPPPPSADAGDPEF*
Ga0182109_12217371	3300015342	Miscanthus Phyllosphere	VTKLMEAAEGPGAALATLFEEEVVPPLPSAGAESPKP*
Ga0182155_11913181	3300015343	Miscanthus Phyllosphere	DDEADEVVTKLLEAAKGPGTALATLFEEEVVPPPPSIDAGGPEP*
Ga0182189_11816952	3300015344	Miscanthus Phyllosphere	AVTKLMEAAEGPGTALATLFEEEVVPPLPSAGAEDPEP*
Ga0182189_12046121	3300015344	Miscanthus Phyllosphere	DDEEADAAVAKLMEAAEGPGTALATLFEEEVVPPLPSADAEGPEP*
Ga0182189_12260121	3300015344	Miscanthus Phyllosphere	KLMEAAEVPGAALASLFEEEVVPPAPAADAGDPEP*
Ga0182111_10933391	3300015345	Miscanthus Phyllosphere	KLIEAAKGPGVALAKLFEEEVVPPPPSADAGGPEP*
Ga0182111_11263821	3300015345	Miscanthus Phyllosphere	LLEAAEGPGTALAMLFEGEVVPPPPSADAGGAEP*
Ga0182139_11626361	3300015346	Miscanthus Phyllosphere	VAKLMEAAKGPSTALAKLFEEEVIPPTSSADAGDPEP*
Ga0182177_10992971	3300015347	Miscanthus Phyllosphere	EADEAVVKLMEAAEGPGTVLAKLFEEEVVPPPPSADAGGPEP*
Ga0182161_12249101	3300015351	Miscanthus Phyllosphere	LVGSVTVAEAPGMALAKLFEEEVVPPTPTIDAGDLEL*
Ga0182161_12365961	3300015351	Miscanthus Phyllosphere	KLMEAAEGPGTALAMLFEEEVVPLLPSAGAECPEP*
Ga0182159_12692812	3300015355	Miscanthus Phyllosphere	DAEVAKLMEAAEAPGTALARLFEEEVVPPAPGADP*
Ga0182159_13162682	3300015355	Miscanthus Phyllosphere	MKLMEAAKGPGAALAGLFEEEVVPRPPSADVGDPTP*
Ga0182203_10737711	3300017404	Miscanthus Phyllosphere	EADATVMKLVDAAEGPGTALATLFKVEVVPPLPSADVGGPEP
Ga0182220_10289881	3300017407	Miscanthus Phyllosphere	MRLEEAAKGLGTALAKLFEEEVVPPSPSADAGDPES
Ga0182204_10442511	3300017409	Miscanthus Phyllosphere	TKLMEAAEVPGAALASLFEEEVVASAPAADAGDPEP
Ga0182204_11148691	3300017409	Miscanthus Phyllosphere	RLLEAAEAPGTALAKLFEEEVVPPALAADAGDLEP
Ga0182207_10913751	3300017410	Miscanthus Phyllosphere	MKLMEAAKGPGAALAGLFEEEVVPPPPSADAGDPTP
Ga0182208_10321941	3300017411	Miscanthus Phyllosphere	EAVNKLMEAVEGPSTALASLFEEEVVPPTPAADAGDPEP
Ga0182208_10794801	3300017411	Miscanthus Phyllosphere	EADAAVTKLMEAAEGPGTALAMLFEEEVVPPLPSAGAEDPEP
Ga0182208_10834521	3300017411	Miscanthus Phyllosphere	EVTKLMEAAGHSTALAKLFEEEVVPPTSSTDAGDPEP
Ga0182222_10333321	3300017413	Miscanthus Phyllosphere	EEADAAVTKLMEAAEGPGTALATLFEEEVVPPLPSAGAEGPEP
Ga0182222_10459621	3300017413	Miscanthus Phyllosphere	EANEVVTKLMEAAEGPGSALAGLFEEEVVPPPPSADAGDPAP
Ga0182222_10618291	3300017413	Miscanthus Phyllosphere	DEEVAKLMEVVEGPGTVLAKLFEEEVVPPPPSADAGDPEP
Ga0182222_10862291	3300017413	Miscanthus Phyllosphere	EEANAAITKLMEAAEGPGTALATLFEEEVVPPLPSADAGGPEP
Ga0182202_11072982	3300017415	Miscanthus Phyllosphere	MKLVEAAEAPGTMLASLFEEEVVPPTPSTDAGDPEF
Ga0182228_10584731	3300017420	Miscanthus Phyllosphere	VKLMEAAEGPSTALAKLFEEEVVPPMPSADAGDPEP
Ga0182228_11090031	3300017420	Miscanthus Phyllosphere	KLMEVAKGPGTALAKLFKEEGVAPLPSANARGPKP
Ga0182219_10621711	3300017424	Miscanthus Phyllosphere	KLLEAAEGPSTALATLFEEEVVPPLPSADAEGAEP
Ga0182224_11618131	3300017425	Miscanthus Phyllosphere	DAEVAKLMEAAEAPGTALAKLFEEEVVPPAPAADP
Ga0182190_10380782	3300017427	Miscanthus Phyllosphere	VTKLMEAAEGPGAALDGLFEEEVVPPPPSADAGDPAP
Ga0182190_11087371	3300017427	Miscanthus Phyllosphere	AAVAKLMEAAEGPGTALAMLFEEEVVPPLPPAGVEGSEP
Ga0182192_10379222	3300017430	Miscanthus Phyllosphere	EVTKLMEAAEGPGTVLAKLFEEEVVPPTPSADAGDLEP
Ga0182192_11257371	3300017430	Miscanthus Phyllosphere	ADEEVTKLMEATEIPGAALASLFEEEVVPPMPAVDAGDPEP
Ga0182192_11406732	3300017430	Miscanthus Phyllosphere	EEANEAVTKLLEAAEGPGTALAMLFEEEVVPPLPSANAGDPEP
Ga0182206_10725161	3300017433	Miscanthus Phyllosphere	DKEEADEEVAKLMEAAEGPGTALAKLFDEEVVPPTPSADAGDPEP
Ga0182206_10792691	3300017433	Miscanthus Phyllosphere	DDEEAHAAVAKLLEAAEGPGTALATLFEDEVVPPLPSAGAGSPEP
Ga0182206_11504441	3300017433	Miscanthus Phyllosphere	PDDNEEANAAVTKLMEAAEGPGTALATLFEEEVVPPLPPAGVEGPKP
Ga0182209_11277671	3300017436	Miscanthus Phyllosphere	EVTKLMEVAEGLGTVLAKLFEEEVVRPTPSADAGDPKP
Ga0182191_11590391	3300017438	Miscanthus Phyllosphere	KLSEVAEGPGTALATLYEEEVVPPPPSIDAGGPEP
Ga0182221_11006091	3300017442	Miscanthus Phyllosphere	EEANEEVAKLMEAAEGLGTVLAKLFKEEVVPPMPSADARDPEP
Ga0182193_10481563	3300017443	Miscanthus Phyllosphere	MKLMEAAEGPGAALAGLFEEEVVPPPPSADAGDPTP
Ga0182193_10558663	3300017443	Miscanthus Phyllosphere	VAKLLEAAEGPGTALATLFEDEVVPPLPSIGAGGPEP
Ga0182233_10876301	3300017680	Miscanthus Phyllosphere	VVAKLMEVAEGPGTALAKLFEEEVVPSTLSIGAGDPEP
Ga0182229_10713351	3300017682	Miscanthus Phyllosphere	VNKLMQAVEGPSTALASLFEEEVVPPAPAADAGDPEP
Ga0182229_11042791	3300017682	Miscanthus Phyllosphere	AAFTKLMEAAEGPGTALAMLFEEEVVPPLPSASAKGLEP
Ga0182218_10967912	3300017683	Miscanthus Phyllosphere	MKLVEAAKAPGTALAKLFEEEVVPRAPTADAGDPEF
Ga0182227_10747681	3300017685	Miscanthus Phyllosphere	MKLVEAAEAPGTALARLFEEEVVPPTPTVDAGDPEF
Ga0182227_10967881	3300017685	Miscanthus Phyllosphere	AVTKLMEAAEGPGAALAGLFEEEVVPPPPSADAGDPTP
Ga0182227_11259141	3300017685	Miscanthus Phyllosphere	DDEEANEELAKLMAATEGLGTALAKLFEEDVVPPPPSADAGDPEP
Ga0182205_11153511	3300017686	Miscanthus Phyllosphere	DDEEADAAVTKLMEAAEGLGTVLAMLFEEEVVPPLPSADAGGPKP
Ga0182231_10783902	3300017689	Miscanthus Phyllosphere	MKLMEAAEGLGVALAGLFEEEVVPPPPSADAGDPTP
Ga0182231_10949871	3300017689	Miscanthus Phyllosphere	VVTKLMEVAEGPGSALATLFEEEVVPPLPPAGVEGSEP
Ga0182223_10115962	3300017690	Miscanthus Phyllosphere	MVTSCLMMTKLMEAAEVPSAALASLFKEEVVPPTPAADAGDPEP
Ga0182223_10831601	3300017690	Miscanthus Phyllosphere	EEADEAVAKLMEVAEGPGTVLAKLFEEEVVPSMPSVGAGDPEP
Ga0182232_10614001	3300021060	Phyllosphere	SKLVEVAEAPGTALAWLFEEEVVPFMPTADAGDPEF
Ga0207709_103476891	3300025935	Miscanthus Rhizosphere	ADAAVAKLMEAAEGPGTALATLFEEEVVPPLPSAGAEGPEP
Ga0207677_106038461	3300026023	Miscanthus Rhizosphere	VVTKLMEAAEGPGAALAGLFEEEVVSPPPSTDARDPAP
Ga0207675_1017608851	3300026118	Switchgrass Rhizosphere	AAVTKLMEAAKGPGTALATLFEEEVVPPLPSAGAEGPEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083608

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences