Metagenome Family F083593

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083593
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	40 residues
Representative Sequence	QNSIVVAEEWSGLRAGLPVLPAFEDPDPVDLSHLRPGRG
Number of Associated Samples	92
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	80.36 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (41.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.48% β-sheet: 0.00% Coil/Unstructured: 95.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01545	Cation_efflux	39.29
PF01741	MscL	10.71
PF02511	Thy1	2.68
PF04389	Peptidase_M28	2.68
PF02129	Peptidase_S15	2.68
PF12543	DUF3738	2.68
PF11954	DUF3471	1.79
PF01370	Epimerase	0.89
PF08530	PepX_C	0.89
PF00575	S1	0.89
PF00483	NTP_transferase	0.89
PF13601	HTH_34	0.89
PF13505	OMP_b-brl	0.89
PF01972	SDH_sah	0.89
PF14329	DUF4386	0.89
PF02225	PA	0.89
PF13744	HTH_37	0.89
PF08837	DUF1810	0.89
PF02885	Glycos_trans_3N	0.89
PF01243	Putative_PNPOx	0.89
PF16881	LIAS_N	0.89
PF13788	DUF4180	0.89
PF00578	AhpC-TSA	0.89
PF13610	DDE_Tnp_IS240	0.89
PF01177	Asp_Glu_race	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	39.29
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	39.29
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	39.29
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	10.71
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	2.68
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG2936	Predicted acyl esterase	General function prediction only [R]	0.89
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	35.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	35.71 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	35.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	8.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	4.46 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.79 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	1.79 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	6.25 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.57 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.89 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	0.89 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.89 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	6.25 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.57 %
Granulicella tundricola MP5ACTX9	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola → Granulicella tundricola MP5ACTX9	0.89 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.89 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.89 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009502\|Ga0114951_10586242	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009621\|Ga0116116_1184076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	538	Open in IMG/M
3300009631\|Ga0116115_1179943	Not Available	534	Open in IMG/M
3300009644\|Ga0116121_1034383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1603	Open in IMG/M
3300009764\|Ga0116134_1176676	Not Available	748	Open in IMG/M
3300010379\|Ga0136449_104443620	Not Available	516	Open in IMG/M
3300011120\|Ga0150983_10688004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	533	Open in IMG/M
3300014153\|Ga0181527_1110258	Not Available	1273	Open in IMG/M
3300014155\|Ga0181524_10099354	Not Available	1630	Open in IMG/M
3300014160\|Ga0181517_10007977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	8699	Open in IMG/M
3300014160\|Ga0181517_10126355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	1460	Open in IMG/M
3300014161\|Ga0181529_10469560	Not Available	670	Open in IMG/M
3300014167\|Ga0181528_10581362	Not Available	620	Open in IMG/M
3300014199\|Ga0181535_10240840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	1095	Open in IMG/M
3300014199\|Ga0181535_10499609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	704	Open in IMG/M
3300014199\|Ga0181535_10878026	Not Available	506	Open in IMG/M
3300014489\|Ga0182018_10018008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4738	Open in IMG/M
3300014492\|Ga0182013_10073777	Not Available	2428	Open in IMG/M
3300014492\|Ga0182013_10132865	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300014492\|Ga0182013_10252689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	1019	Open in IMG/M
3300014499\|Ga0182012_10450351	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300014501\|Ga0182024_11952703	Not Available	651	Open in IMG/M
3300014638\|Ga0181536_10408546	Not Available	605	Open in IMG/M
3300014655\|Ga0181516_10147116	Not Available	1193	Open in IMG/M
3300014657\|Ga0181522_10038465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2665	Open in IMG/M
3300014838\|Ga0182030_10726622	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300014838\|Ga0182030_10949459	Not Available	763	Open in IMG/M
3300014838\|Ga0182030_11215598	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300014839\|Ga0182027_10294027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1841	Open in IMG/M
3300014839\|Ga0182027_10587342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1200	Open in IMG/M
3300017935\|Ga0187848_10083467	Not Available	1477	Open in IMG/M
3300017940\|Ga0187853_10082052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1606	Open in IMG/M
3300017946\|Ga0187879_10737798	Not Available	549	Open in IMG/M
3300017948\|Ga0187847_10164157	Not Available	1213	Open in IMG/M
3300017988\|Ga0181520_10015320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	9363	Open in IMG/M
3300017988\|Ga0181520_10788557	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300018018\|Ga0187886_1340059	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300018019\|Ga0187874_10471527	Not Available	504	Open in IMG/M
3300018022\|Ga0187864_10468483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	533	Open in IMG/M
3300018023\|Ga0187889_10295843	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300018025\|Ga0187885_10327997	Not Available	690	Open in IMG/M
3300018030\|Ga0187869_10555833	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300018033\|Ga0187867_10120140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1521	Open in IMG/M
3300018034\|Ga0187863_10512558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	672	Open in IMG/M
3300018035\|Ga0187875_10504790	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300018037\|Ga0187883_10594176	Not Available	574	Open in IMG/M
3300018042\|Ga0187871_10645922	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300018046\|Ga0187851_10333264	Not Available	875	Open in IMG/M
3300019787\|Ga0182031_1524620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2638	Open in IMG/M
3300022849\|Ga0224531_1018921	Not Available	1504	Open in IMG/M
3300023090\|Ga0224558_1037213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2137	Open in IMG/M
3300023101\|Ga0224557_1231440	Not Available	623	Open in IMG/M
3300024295\|Ga0224556_1087411	Not Available	764	Open in IMG/M
3300025473\|Ga0208190_1065020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	744	Open in IMG/M
3300025496\|Ga0208191_1095450	Not Available	608	Open in IMG/M
3300027824\|Ga0209040_10234369	Not Available	930	Open in IMG/M
3300028090\|Ga0255349_1009687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2582	Open in IMG/M
3300028268\|Ga0255348_1003431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3890	Open in IMG/M
3300028572\|Ga0302152_10050076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1300	Open in IMG/M
3300028652\|Ga0302166_10153358	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300028676\|Ga0302167_10245513	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300028745\|Ga0302267_10017765	All Organisms → cellular organisms → Bacteria	5444	Open in IMG/M
3300028748\|Ga0302156_10087455	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300028867\|Ga0302146_10117403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1086	Open in IMG/M
3300028867\|Ga0302146_10319387	Not Available	598	Open in IMG/M
3300028882\|Ga0302154_10231654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	927	Open in IMG/M
3300028882\|Ga0302154_10560869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	539	Open in IMG/M
3300028909\|Ga0302200_10448051	Not Available	595	Open in IMG/M
3300029883\|Ga0311327_10688424	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300029911\|Ga0311361_10152966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3016	Open in IMG/M
3300029913\|Ga0311362_10172637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2560	Open in IMG/M
3300029913\|Ga0311362_10377281	Not Available	1408	Open in IMG/M
3300029914\|Ga0311359_10343902	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300029917\|Ga0311326_10624105	Not Available	517	Open in IMG/M
3300029922\|Ga0311363_10065779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5369	Open in IMG/M
3300029922\|Ga0311363_11155835	Not Available	658	Open in IMG/M
3300029956\|Ga0302150_10327479	Not Available	569	Open in IMG/M
3300029985\|Ga0302280_1112849	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300029986\|Ga0302188_10112167	Not Available	1204	Open in IMG/M
3300029987\|Ga0311334_10025377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4116	Open in IMG/M
3300029988\|Ga0302190_10045014	Not Available	2196	Open in IMG/M
3300029992\|Ga0302276_10197388	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300029994\|Ga0302283_1084738	Not Available	1351	Open in IMG/M
3300029994\|Ga0302283_1101120	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300030000\|Ga0311337_11927976	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300030011\|Ga0302270_10077636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2169	Open in IMG/M
3300030020\|Ga0311344_11417812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	508	Open in IMG/M
3300030044\|Ga0302281_10316453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	619	Open in IMG/M
3300030045\|Ga0302282_1063383	Not Available	1637	Open in IMG/M
3300030045\|Ga0302282_1201051	Not Available	754	Open in IMG/M
3300030045\|Ga0302282_1318289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	560	Open in IMG/M
3300030049\|Ga0302191_10213781	Not Available	721	Open in IMG/M
3300030051\|Ga0302195_10315629	Not Available	689	Open in IMG/M
3300030399\|Ga0311353_10943512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola → Granulicella tundricola MP5ACTX9	726	Open in IMG/M
3300030506\|Ga0302194_10026963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3055	Open in IMG/M
3300030507\|Ga0302192_10113654	Not Available	1246	Open in IMG/M
3300030518\|Ga0302275_10142053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1518	Open in IMG/M
3300030518\|Ga0302275_10612200	Not Available	524	Open in IMG/M
3300030618\|Ga0311354_10515350	Not Available	1179	Open in IMG/M
3300030688\|Ga0311345_10314354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1470	Open in IMG/M
3300030688\|Ga0311345_10880023	Not Available	690	Open in IMG/M
3300031259\|Ga0302187_10337735	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300031259\|Ga0302187_10493783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	562	Open in IMG/M
3300031524\|Ga0302320_10147036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3568	Open in IMG/M
3300031524\|Ga0302320_11335635	Not Available	720	Open in IMG/M
3300032892\|Ga0335081_12707874	Not Available	506	Open in IMG/M
3300033402\|Ga0326728_10584243	Not Available	876	Open in IMG/M
3300033755\|Ga0371489_0026349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4465	Open in IMG/M
3300034091\|Ga0326724_0514232	Not Available	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.07%
Aquatic	Environmental → Aquatic	33.93%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	50.89%
Freshwater	Environmental → Aquatic → Freshwater	33.93%
Soil	Environmental → Terrestrial → Soil	15.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	50.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.39%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.89%
Loam	Environmental → Terrestrial → Soil → Loam	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	50.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	27.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	28.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	12.50%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	11.61%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	7.14%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.36%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.36%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.57%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028676	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_1	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0114951_105862422	3300009502	Freshwater	IVVAESWTGLRAGIPVIPAYEDPDPLDLSHLRPGRG*
Ga0116116_11840761	3300009621	Peatland	QPGNPQNSIVVSEGWSGLRAGLPVLPEFEDPEPIDTSHLESLRPGRG*
Ga0116115_11799432	3300009631	Peatland	PYNSIVVGDGWTALRERIPQLPSFDDPDPLDLSHLRPGKG*
Ga0116121_10343831	3300009644	Peatland	QNSIVVAEDWTGVRAGIPVLPPYEDPDPLDLSHLRPGRG*
Ga0116134_11766761	3300009764	Peatland	IVIAEGWTGLRVGLPQFPAMDDPNPLDRSHLESDAH*
Ga0136449_1044436201	3300010379	Peatlands Soil	SIVVGEGWTGLRERIPQLPSFDDPDPLDLSHLRPGKG*
Ga0150983_106880041	3300011120	Forest Soil	PQNSIVVAEGWTGLREGLPQLRAFEAPDQWDLSRARPGRG*
Ga0181527_11102581	3300014153	Bog	PHNSIVVAEGWTGLRAGLPQFPSFDDPNPLDTRHLQR*
Ga0181524_100993541	3300014155	Bog	PQNSIVVAEGWTGLREGLPQLQSFDGPDPLDMSHLERNE*
Ga0181517_100079771	3300014160	Bog	IVIAEHWTGLRAGLPVLPAYDDPDPLDLSHLRPGRG*
Ga0181517_101263551	3300014160	Bog	AEEWSGLRAGLPVYPAYEDPDPVDTIHLDSLRPGRG*
Ga0181529_104695602	3300014161	Bog	QPGNPYNSIIIAEEWSGLRAGLPVLPSFDDPDPLDTSHLRAGKALRSGQR*
Ga0181528_105813621	3300014167	Bog	NSIVMAEEWSGLRVGLPVLPEYDDPEPIDISHLRPGRG*
Ga0181535_102408401	3300014199	Bog	IVVAEEWSGLREGLPVLPVYEDRDPIDTTHLDSLRPGRG*
Ga0181535_104996091	3300014199	Bog	NSIVVSEEWSGLRMGLPAQHVYADPDPIDLSHLRPGRG*
Ga0181535_108780262	3300014199	Bog	VAESWTGLRAGIPVIPAYEDPDPLDLSHLRPGRG*
Ga0182018_100180081	3300014489	Palsa	HNSIVVAEEWSGLRVGLPVFPAYEDPDPVDTIHLDSMRPGRG*
Ga0182013_100737771	3300014492	Bog	VVAEEWSGLRVGLPVLPAYDDPEPVDLNHLRPGRG*
Ga0182013_101328651	3300014492	Bog	NSIVVAEEWIGLRASLPVLPAYDEPEHFDMSHLRPGRG*
Ga0182013_102526891	3300014492	Bog	QPGNPHNSIVVAEEWSGLRAGLPVFPTYDDPDPIDTSHLEGQRPGRG*
Ga0182011_100846763	3300014496	Fen	VVAEEWSGMREGLPVPPAFEDPESLHMSPLRPGRG*
Ga0182012_104503512	3300014499	Bog	PGNPQNSIVVAGGWTGLRAGLPVLPAFDDPDPVDLSHRRLGRG*
Ga0182024_119527032	3300014501	Permafrost	PQNSIVVAETWSGIRASIPTFPAYEDPDPVDTSHLRPSPPSP*
Ga0181536_104085461	3300014638	Bog	NSIVVAEGWSGLREGLPQLLAFDDHDPFDMSHLRRKDQELGT*
Ga0181516_101471161	3300014655	Bog	PYNSIVVAEGWTGLRAGLPQFPSIDDPDPIDRSHLKPGAD*
Ga0181522_100384653	3300014657	Bog	GNPQNSIVVAEDWTGVRAGIPVLPPYEDPDPLDLSHLRPGRG*
Ga0182030_107266221	3300014838	Bog	NPQNSIVVSEEWSGLRAGLPVFPEFENPEPIDTSHLEVLRPGRG*
Ga0182030_109494591	3300014838	Bog	QNSIVVAEEWTGLRMCPPVFPAYDDPEPLDLSHLRPGRG*
Ga0182030_112155982	3300014838	Bog	YQPGNPQNSIVVAEEWSGLRMGLPAQHVYDNPDPIDLSHLRPGRG*
Ga0182027_102940271	3300014839	Fen	PQNSIVVAEGWTGLREGLPQLQSFDDPDPLDMSHLERNE*
Ga0182027_105873422	3300014839	Fen	VVSEEWSGLREGLPVLPAFDDPDPIDKSHLDLLRPGRG*
Ga0187848_100834671	3300017935	Peatland	IVVGEGWTGLRKRIPQLPSFDDPDPLDLSHLRPGKG
Ga0187853_100820521	3300017940	Peatland	GNPQNSIVVAEDWTGVRAGIPVLPPYEDPDPLDLSHLRPGRG
Ga0187879_107377981	3300017946	Peatland	GNPHNSIVIAEGWTGLRVGLPQFPAMDDPNPLDRSHLESDAH
Ga0187847_101641572	3300017948	Peatland	VAEGWTGLRAGLPQFPSIDDPDPLDTSHLEPHDHEPPTRKPS
Ga0181520_100153201	3300017988	Bog	NSIVVSEEWSGLRMGLPVLPVYDDPEPIDISHLRPGRG
Ga0181520_107885571	3300017988	Bog	PGNPQNSIVVAEEWTGLREGLPVLPAYEDRDPVDTTHLDSLRPGRG
Ga0187886_13400592	3300018018	Peatland	IAEEWTGLRVGLPVLPAYDDPEPIDTKHLEGLRPGRNYES
Ga0187874_104715272	3300018019	Peatland	IVVAEEWTGLRAGLPVLPNYDEPEPFDMSHLRPGRG
Ga0187864_104684832	3300018022	Peatland	VRYQPGNHHNSIVVAEEWSGLRAGLPVLSSCDDREPSDTSHLRPGRG
Ga0187889_102958431	3300018023	Peatland	HNSIVVAEEWSGLRVGLPVFPAYEDPDPVDTIHLDSLRPGRG
Ga0187885_103279971	3300018025	Peatland	NPNNSIVVAEGWTGLRAGLPQFPSIDDPNPLDRSHLEPDAH
Ga0187869_105558331	3300018030	Peatland	EEWSGLREGLPVLPEFEDPEPIDREHLEGLRPGRG
Ga0187867_101201401	3300018033	Peatland	QPGNPNNSIVIAEGWTGLRAGLPQFPSIDDPNPLDRSHLEPDAH
Ga0187863_105125581	3300018034	Peatland	HHNSIVVAEEWTGLRAGLPVLPNYDEPEPFDMSHLRPGRG
Ga0187875_105047901	3300018035	Peatland	ARYQPGNPQNSIVVAEDWTGIRMGLPPQHVYEDPEPIDLSHLRPGRG
Ga0187883_105941762	3300018037	Peatland	PQSSIVVAEGWSGLREGLPQLPVFEDPNSLDRSHLEHESK
Ga0187871_106459221	3300018042	Peatland	QPGNPQNSIVVAEDWTGIRMGLPPQHVYEDPEPIDLSHLRPGRG
Ga0187851_103332642	3300018046	Peatland	VVAEEWSGLRAGLPAQHEYADPEPVDLSHLRPGRG
Ga0182031_15246205	3300019787	Bog	PHNSIVVAEEWSGLRMGLPAQHVYEDPDPIDVSHLRPGRG
Ga0224531_10189213	3300022849	Soil	NSMVVSEEWTGLRVGLPVFPAYEDPEPVDLSYLRPGRG
Ga0224558_10372131	3300023090	Soil	NPQNSIVVAEEWTGLRAGLPVLPAYDNPEPQDISHLRSGRG
Ga0224557_12314402	3300023101	Soil	SIVVAEEWSGLRAGLPVLPAYDNPEPNDLSHLRPGRG
Ga0224556_10874112	3300024295	Soil	IVVAEEWSGLRMGLPAQHVYDNPDPIDLSHLRPGRG
Ga0208190_10650202	3300025473	Peatland	QNSIVVAEDWTGVRAGIPVLPPYEDPDPLDLSHLRPGRG
Ga0208191_10954501	3300025496	Peatland	QPGNPYNSIVVGEGWTGLRERIPQLPSFDDPDPLDLSHLRPGKG
Ga0209040_102343693	3300027824	Bog Forest Soil	IVVAEEWSGLRVGLPVLPAYDDPDPLDASHLEAMRPGRG
Ga0255349_10096871	3300028090	Soil	PQNSIVVAEGWTGLRAGLPVLPAYDDPSPADTIHLDSLRPGRG
Ga0255348_10034313	3300028268	Soil	VVAEEWSGLRAGLPVFPTYDDPDPIDTSHLEGQRPGRG
Ga0302152_100500761	3300028572	Bog	VAEEWSGLREGLPVLPVYEDRDPVDTIHLDSMRPGRG
Ga0302166_101533581	3300028652	Fen	NSIVVAEDWSGLREGLPVLHAYEDPEPVDKTHLSSLRPGRG
Ga0302167_102455132	3300028676	Fen	SIVVAEDWSGLREGLPVLHAYEDPEPVDKTHLSSLRPGRG
Ga0302267_100177651	3300028745	Bog	VVAEEWSGLRAGLPVFPEFEDPDPTGKSHLESLRPGRG
Ga0302156_100874551	3300028748	Bog	IVVAEKWTGLRIGLPLQHVYEDPDPIDLSHLRPGRG
Ga0302146_101174031	3300028867	Bog	QPGNPNNSIVVAEEWIGLRASLPVLPAYDEPEHFDMSHLRPGRG
Ga0302146_103193872	3300028867	Bog	IVVAEEWSGLRMGLPAQHVYEDPDPIDVSHLRPGRG
Ga0302154_102316542	3300028882	Bog	IVVSEEWSGLRMGLPAQHVYDDPDPIDVSHLRPGRG
Ga0302154_105608692	3300028882	Bog	QPGNPQNSIVVAEEWSGLRAGLPVPHIYDDPEPNDISHLRPGRG
Ga0302200_104480511	3300028909	Bog	QPGNPQNSIVVAEGWTGLRAGLPQFPVFEDPDPLDMSHLRRR
Ga0311327_106884241	3300029883	Bog	NPQNSIVIAEEWTGLRVGLPVLPAYDDPEPIDTKHLEGLRPGRNYES
Ga0311361_101529664	3300029911	Bog	IVVAEKWTGLRVGLPAQHVYEDPDPIDFSHLRPGRG
Ga0311362_101726373	3300029913	Bog	NPQNSIVVAESWTGLRGGIPVLPAYDNPDPLDASHLRPGRG
Ga0311362_103772811	3300029913	Bog	PHNSIVVAEEWTGLRAGLPVLPAYDEPEPFDMSHLRPGRG
Ga0311359_103439021	3300029914	Bog	SIVVAEKWTGLRIGLPLQHVYEDPDPIDLSHLRPGRG
Ga0311326_106241051	3300029917	Bog	NPHNSIVVAEEWSGLRAGLPVLPAYDDPDPIDMSHLEVLRPGRG
Ga0311363_100657795	3300029922	Fen	GNPYNSIVIAEGWTGLRAGLPQFPSIDDPNPIDQSHLEPGSH
Ga0311363_111558352	3300029922	Fen	SIVVAEEWSGLRAGLPVLPAYDDPDPIDMSHLEVLRPGRG
Ga0302150_103274791	3300029956	Bog	GNPNNSIVVAEEWTGLRAGLPVLPAYEEPEHFDMSHLRPGRG
Ga0302280_11128492	3300029985	Fen	NSIVIAEQWTGLRASLPQFPPYDDPDPLDLSHLRPGRG
Ga0302188_101121671	3300029986	Bog	PQNSIVVAETWSGLRLGLPVLPVFEDPDPLDVTHLRPGRGED
Ga0311334_100253775	3300029987	Fen	LPGKPQNSIVVAEDWSGLREGLPVLHAYEDPEPVDKTHLSSLRPGRG
Ga0302190_100450141	3300029988	Bog	IVVAEEWSGLRAGLPVFPEFEDPDPIGKTHLESLRPGRG
Ga0302276_101973881	3300029992	Bog	PGNPQNSIVVAEKWTGLRIGLPLQHVYEDPDPIDLSHLRPGRG
Ga0302283_10847382	3300029994	Fen	VVSEEWSGLRMGLPAQHIYADPDPIDLSHLRPGRG
Ga0302283_11011201	3300029994	Fen	QNSIVVAEEWSGLRAGLPVLPAFEDPDPVDLSHLRPGRG
Ga0311337_119279762	3300030000	Fen	GKPQNSIVVAEDWSGLREGLPVLPTYEDRDPVETIHLDSLRPGRG
Ga0302270_100776363	3300030011	Bog	NPYNSIVVAEGWTGLRAGLPQFPSIDDPNPIDQSHLEPGSH
Ga0311344_114178121	3300030020	Bog	QPGNPQNSIVVAEHWTGLRIGLPQLPVYDDPDPIDLSHLRPGRG
Ga0302281_103164532	3300030044	Fen	NPQNSIVVAEQWSGLRIGLPQLPVYEEPDPIDLSHLRPGRG
Ga0302282_10633831	3300030045	Fen	QNSIVVAEHWTGLRIGLPQLPVYDDPDPIDLSHLRPGRG
Ga0302282_12010512	3300030045	Fen	NSIVVAEEWSGLRVGLPVQHVYDDPEPNDISHLRPGRG
Ga0302282_13182892	3300030045	Fen	PGNPQNSIVVAEHWTGLRIGLPQLPVYDDPDPIDLSHLRPGRG
Ga0302191_102137811	3300030049	Bog	IVVAETWSGLRLGLPVLPVFEDPDPLDVTHLRPGRGED
Ga0302195_103156292	3300030051	Bog	NSIVVAEEWSGLRAGLPVPHIYDDPEPNDISHLRPGRG
Ga0311353_109435121	3300030399	Palsa	PQNSIVVSEEWTGLRMGLPAQHVYEDPDPIDMSHLRPGRG
Ga0302194_100269631	3300030506	Bog	NPQNSIVVAETWSGLRLGLPVLPVFEDPDPLDVTHLRPGRGED
Ga0302192_101136541	3300030507	Bog	NPQNSIVVAEEWSGLRAGLPVPHIYDDPEPNDISHLRPGRG
Ga0302275_101420533	3300030518	Bog	PGNPQNSIVVAEEWTGMRTGIPVLPVFDNPEPLDISHLRPGRG
Ga0302275_106122002	3300030518	Bog	SDLPQNSIVVAEHWSGLRIGLPILPTYDDPEPRDMSHLRPGRG
Ga0311354_105153502	3300030618	Palsa	QPGNPQNSIVVAEKWTGLRVSLPQFPAYEDPDPLDLSHLRPGRG
Ga0311345_103143544	3300030688	Bog	GNPQNSIVVAEHWTGLRIGLPQLPVYDDPDPIDLSHLRPGRG
Ga0311345_108800232	3300030688	Bog	PQNSIVVAEEWSGLREGLPQYPIYDDPEPLDLSHLRPGRG
Ga0302187_103377352	3300031259	Bog	IVVAEEWTGLREGLPVLPAYDDPDPLDTSHLEVLRPGRG
Ga0302187_104937831	3300031259	Bog	SARYQPGSPQNSMVVAEEWTGLRLGRPGLPAYDDPEPIDLSYLRPGRG
Ga0302320_101470361	3300031524	Bog	NSIVVAEHWTGLRIGLPQLPVYDDPDPIDLSHLRPGRG
Ga0302320_113356351	3300031524	Bog	QNSIVIAEHWSGLRAGLPQFPPYDDPDPVDISHLRPGRG
Ga0335081_127078742	3300032892	Soil	IVVAEGWTGLREGLPQLPSFEDPESLDTSHLRPGSG
Ga0335073_117861161	3300033134	Soil	VVAEGWSGLREGLPQLPVFEDPDAVDRGPLEPGAH
Ga0326728_105842432	3300033402	Peat Soil	NPQNSIVVAEDWSGLRVGLPVLPAYDDPEPVDLSHLRPGRG
Ga0371489_0026349_2_133	3300033755	Peat Soil	PGNPPNSIVVAEDWSGLRKGIPLLPNFDDPDPLDLSHLRPGRG
Ga0371487_0316209_581_688	3300033982	Peat Soil	VVAEGWTGLREGLPQFPAFEDPEPVDMSHLSRGAK
Ga0326724_0514232_498_608	3300034091	Peat Soil	HNSIVVAEGWTGLRAGLPQFPSFDDPNPLDTRHLQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083593

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences