Metagenome Family F083578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083578
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	114 residues
Representative Sequence	MMSLNEPQMQALGWIEDGLTGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHRPRRDRRHPRCGIALPQARRLYPRLGLQQAMLLLWVVITAGLLVVALVLNTSGH
Number of Associated Samples	87
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.89 %
% of genes near scaffold ends (potentially truncated)	52.68 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (58.929 % of family members)
Environment Ontology (ENVO)	Unclassified (67.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.357 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.71% β-sheet: 0.00% Coil/Unstructured: 59.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03176	MMPL	25.89
PF00005	ABC_tran	8.04
PF01370	Epimerase	7.14
PF00196	GerE	2.68
PF13411	MerR_1	1.79
PF00581	Rhodanese	1.79
PF11239	DUF3040	1.79
PF02687	FtsX	0.89
PF13545	HTH_Crp_2	0.89
PF01061	ABC2_membrane	0.89
PF13564	DoxX_2	0.89
PF00571	CBS	0.89
PF13424	TPR_12	0.89
PF01042	Ribonuc_L-PSP	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	25.89
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	25.89
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.46 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.57 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10016496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5513	Open in IMG/M
3300005332\|Ga0066388_100005126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9059	Open in IMG/M
3300005445\|Ga0070708_100042975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3970	Open in IMG/M
3300005467\|Ga0070706_100216867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1786	Open in IMG/M
3300005471\|Ga0070698_100944740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300005764\|Ga0066903_102866384	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005764\|Ga0066903_104753980	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_108205246	All Organisms → cellular organisms → Bacteria → Terrabacteria group	534	Open in IMG/M
3300006028\|Ga0070717_10934739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300006028\|Ga0070717_11909899	Not Available	536	Open in IMG/M
3300009525\|Ga0116220_10165646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951	Open in IMG/M
3300009698\|Ga0116216_10587662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300010047\|Ga0126382_11653077	Not Available	596	Open in IMG/M
3300010361\|Ga0126378_10494225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1339	Open in IMG/M
3300010361\|Ga0126378_12215446	Not Available	627	Open in IMG/M
3300010366\|Ga0126379_12030894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300010376\|Ga0126381_100623228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1537	Open in IMG/M
3300010376\|Ga0126381_104413450	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010379\|Ga0136449_100237128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3408	Open in IMG/M
3300012351\|Ga0137386_10129105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1801	Open in IMG/M
3300012971\|Ga0126369_10744343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300016319\|Ga0182033_10026616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3626	Open in IMG/M
3300016319\|Ga0182033_11154208	Not Available	693	Open in IMG/M
3300016357\|Ga0182032_10050937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2685	Open in IMG/M
3300016387\|Ga0182040_10756432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300016404\|Ga0182037_10044200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2931	Open in IMG/M
3300016404\|Ga0182037_10161555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300018088\|Ga0187771_11165204	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300020581\|Ga0210399_10285579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1377	Open in IMG/M
3300020582\|Ga0210395_10368928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300021403\|Ga0210397_11405943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300021407\|Ga0210383_10758753	Not Available	832	Open in IMG/M
3300021432\|Ga0210384_10924974	Not Available	773	Open in IMG/M
3300021560\|Ga0126371_12823262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300026557\|Ga0179587_10543924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300027905\|Ga0209415_10066600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4346	Open in IMG/M
3300027965\|Ga0209062_1080792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1424	Open in IMG/M
3300030494\|Ga0310037_10205827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300031057\|Ga0170834_100598538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300031543\|Ga0318516_10003417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6842	Open in IMG/M
3300031543\|Ga0318516_10022858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3218	Open in IMG/M
3300031543\|Ga0318516_10316038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300031543\|Ga0318516_10407863	Not Available	783	Open in IMG/M
3300031544\|Ga0318534_10073045	Not Available	1944	Open in IMG/M
3300031544\|Ga0318534_10157426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300031544\|Ga0318534_10718215	Not Available	564	Open in IMG/M
3300031546\|Ga0318538_10152169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1223	Open in IMG/M
3300031546\|Ga0318538_10189146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300031572\|Ga0318515_10054110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2026	Open in IMG/M
3300031572\|Ga0318515_10343812	Not Available	800	Open in IMG/M
3300031573\|Ga0310915_10924321	Not Available	611	Open in IMG/M
3300031640\|Ga0318555_10636804	Not Available	577	Open in IMG/M
3300031679\|Ga0318561_10480084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300031680\|Ga0318574_10904255	Not Available	517	Open in IMG/M
3300031682\|Ga0318560_10059966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1896	Open in IMG/M
3300031708\|Ga0310686_102235260	Not Available	950	Open in IMG/M
3300031708\|Ga0310686_103144820	Not Available	890	Open in IMG/M
3300031708\|Ga0310686_118823418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1303	Open in IMG/M
3300031713\|Ga0318496_10001803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8743	Open in IMG/M
3300031713\|Ga0318496_10571391	Not Available	625	Open in IMG/M
3300031719\|Ga0306917_10925276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300031723\|Ga0318493_10110007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1392	Open in IMG/M
3300031736\|Ga0318501_10418594	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031748\|Ga0318492_10356444	Not Available	766	Open in IMG/M
3300031751\|Ga0318494_10218324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300031764\|Ga0318535_10359201	Not Available	651	Open in IMG/M
3300031765\|Ga0318554_10542211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300031768\|Ga0318509_10648959	Not Available	587	Open in IMG/M
3300031771\|Ga0318546_10435211	Not Available	918	Open in IMG/M
3300031777\|Ga0318543_10514855	Not Available	536	Open in IMG/M
3300031781\|Ga0318547_10014155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3765	Open in IMG/M
3300031781\|Ga0318547_10893049	Not Available	554	Open in IMG/M
3300031782\|Ga0318552_10636654	Not Available	544	Open in IMG/M
3300031798\|Ga0318523_10184854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300031799\|Ga0318565_10597751	Not Available	530	Open in IMG/M
3300031819\|Ga0318568_10049802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2412	Open in IMG/M
3300031821\|Ga0318567_10217041	Not Available	1070	Open in IMG/M
3300031835\|Ga0318517_10273790	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300031845\|Ga0318511_10133080	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300031845\|Ga0318511_10162979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300031879\|Ga0306919_10530934	Not Available	908	Open in IMG/M
3300031890\|Ga0306925_10468834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300031893\|Ga0318536_10320675	Not Available	786	Open in IMG/M
3300031910\|Ga0306923_10260032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1986	Open in IMG/M
3300031910\|Ga0306923_10896412	Not Available	972	Open in IMG/M
3300031942\|Ga0310916_10360721	Not Available	1235	Open in IMG/M
3300031945\|Ga0310913_10879790	Not Available	630	Open in IMG/M
3300031946\|Ga0310910_10067381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2574	Open in IMG/M
3300031947\|Ga0310909_10117051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2160	Open in IMG/M
3300031981\|Ga0318531_10241849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300032001\|Ga0306922_10175382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2297	Open in IMG/M
3300032008\|Ga0318562_10046020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2381	Open in IMG/M
3300032009\|Ga0318563_10382094	Not Available	762	Open in IMG/M
3300032010\|Ga0318569_10289547	Not Available	762	Open in IMG/M
3300032042\|Ga0318545_10285339	Not Available	593	Open in IMG/M
3300032054\|Ga0318570_10265186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300032055\|Ga0318575_10299358	Not Available	814	Open in IMG/M
3300032059\|Ga0318533_10385207	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300032059\|Ga0318533_10516858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300032063\|Ga0318504_10516067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300032064\|Ga0318510_10461402	Not Available	547	Open in IMG/M
3300032066\|Ga0318514_10157360	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300032076\|Ga0306924_10529987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1339	Open in IMG/M
3300032076\|Ga0306924_10545325	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300032089\|Ga0318525_10063992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1840	Open in IMG/M
3300032090\|Ga0318518_10191680	Not Available	1046	Open in IMG/M
3300032094\|Ga0318540_10468417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300032261\|Ga0306920_103637434	Not Available	567	Open in IMG/M
3300033289\|Ga0310914_11246264	Not Available	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.07%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	73.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	58.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.14%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100164963	3300001356	Peatlands Soil	MSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRERPAAHRPRRAQRHPHRGIAPPQARRPYPRLGLQQTMLLLWVVITAGMLAVALVLNTSGH*
Ga0066388_1000051269	3300005332	Tropical Forest Soil	MMSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVGEKIRVRRGRPGAHRPRRARRHPHRGTVFPQARRLYPHLGLPLVMVLLWVVISAGMVAVALVLNTSGH*
Ga0070708_1000429753	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLNEPQMQALGWIEDGLTGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHRPRRDRRHPRCGIALPQARRLYPRLGLQQAMLLLWVVITAGLLVVALVLNTSGH*
Ga0070706_1002168672	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLNQPQRQALGSIGDGLAGSDPRLASMLNIFSRLAADEEMPGREKIRVRRGQPAAHRPRRARRHPRQGIALPQARRLYPRLGLQQAVVLLWVVITAGLLAVALVLNTS
Ga0070698_1009447401	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLNQPQRQALGSIGDGLAGSDPRLASMLNIFSRLAADEEMPGREKIRVRRGQPAAHRPRRARRHPRQGIALPQARRLYPRLGLQQAVVLLWVVITA
Ga0066903_1028663842	3300005764	Tropical Forest Soil	MMSLTEPEMQALGAIADGLAGSDPRLASMLTIFSRLAAGEEMPTHGTIRGQRGRPRARRPRRGMAPPHARQLYPRLGWPLTMFLLWAVISAALVAVALALS
Ga0066903_1047539801	3300005764	Tropical Forest Soil	MMSLNEPQKQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREEIRVPRGRPAADRSRRARRHPRGGTVFPQARRLYPRLGLQQAMLLLWVVISAGLVAVALVLSTSGHTGCIQSMGTACSSPPPHSMPTHPT*
Ga0066903_1082052462	3300005764	Tropical Forest Soil	GTIEHGLAGSDPRLASMLNIFSRLAAGEEMPAREKTRVRRHPRRGTARPQARRLYTRLGRQQAILLLWAVTTAALLTVALLLNTSGHNACIQSIGTTCPSPPSHSGPGSTLG*
Ga0070717_109347392	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	NEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAPRPRPARRHPRRGIALPQARRLYPRLGLQQAMLLLWVVITAGLLAVALVLNTSGH*
Ga0070717_119098991	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGQPAAPRPRPARRHPRWGTAPPQARRLYPRLGLQQAMLLLWVVISAGMLAVALVLNTSGH*
Ga0116220_101656461	3300009525	Peatlands Soil	LDVMMMSLTELENQALGAIADGQAGSDPRLASMLNIFTRLAADEEMPAREKTRVRRGRPPARPRRAQRHPHRGIAPPQARRPYPRLGLQQTTLLLWVVITA
Ga0116216_105876622	3300009698	Peatlands Soil	MMSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRERPAAHRPRRAQRHPHRGIAPPQARRPYPRLGLQQTMLLLWVVITAGMLAVALVLNTS
Ga0126382_116530771	3300010047	Tropical Forest Soil	TLEVMMMSFTEPEMQALGWIEDGLDGSDPRLASMLNIFSRLAAGEEMPVGEKIRVRRGRPGAHRPRRARRHPHRGTVFPQARRLYPHLGLPLVMVLLWVVISAGMVAVALVLNTSGH*
Ga0126378_104942252	3300010361	Tropical Forest Soil	MSLIQSETQTLGTIADDLAGSDPRLASMLNIFSRLAVGEEMPARAKTQVRRGRPPARPRRTRRHPRPGTTLPQVRRLYPRLGRQQAILLLWAVTTAALLATALLLNASGHNACIQSIGTACPSPPSHGGPR*
Ga0126378_122154461	3300010361	Tropical Forest Soil	LDVMMMSLTEPETQALGTIEHGLAGSDPRLASMLNIFSRLAAGEEMPADEKIRIWRGRPAAHRPRRAGRHPRWGTAFPLARRPYLRLGRPQAILLPWAVTTAVGPVAPAGGGSPHQRHNR
Ga0126379_120308941	3300010366	Tropical Forest Soil	LEVMMMSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAREKIRVRRPHRGTVFPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH*
Ga0126381_1006232281	3300010376	Tropical Forest Soil	LEVMMMSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVGEKIRVRRGRPGAHRPRRARRHPHRGTVFPQARRLYPHLGLPLVMVLLWVVISAGMVAVALVLNTSGH*
Ga0126381_1044134501	3300010376	Tropical Forest Soil	MMMSLTEPHRQALGSIEHGLAGSDPRLASMLTIFSRLAAGEEMPAREKIRIRRGWPAAHRPRRARRHPRQGTALPQPRRLYPRLGWQRAMLLLW
Ga0136449_1002371282	3300010379	Peatlands Soil	MMSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRERPAAHRPRRAQRHPHRGIAPPQARRPYPRLGLQQTMLLLWVVITAGMLAVALVLNTSGH*
Ga0137386_101291053	3300012351	Vadose Zone Soil	MMMSFTELERQALGSIEDGLAGSDPRLASMLSIFSWLAAGEEMPTREKIRIRRGRPAARRPRRVIALPQARRLYPRLGRQQAMPLLWAVITAALLAIALILNTSGHNAPCTRSMGTACPSPPSGSGPASTYG*
Ga0126369_107443431	3300012971	Tropical Forest Soil	MMMSLTEPQRQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVRTKIRVRRGRPAAHRPRRARRHPGPGTVFPQPRRLYPHLGLPPAMVLLWVVISAGMVAVVLVLNTSGH*
Ga0182033_100266161	3300016319	Soil	MMSLNEPEMQALGWIEDSLAGSDPGLASMLHIFSRLAAGEEMPADERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVALVLNTSGH
Ga0182033_111542082	3300016319	Soil	MSRTEPHSQALDAIADGLAGSDPRLASMLTIFSQLAAGEEMPAREEIRIRRGWPPARPRRARRHPRPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVL
Ga0182032_100509372	3300016357	Soil	MMSPNETEMQALGWIEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLALQQAMVLLWAVSTAGLLAVALVLNTSGH
Ga0182040_107564322	3300016387	Soil	MMSPNETEMQALGWIEDSLAGSDPRLASMLHIFSWLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVALVLNTSGH
Ga0182037_100442006	3300016404	Soil	MMSPNETEMQALGWIEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWVVSTAGLLAVALVLNTSGH
Ga0182037_101615551	3300016404	Soil	PEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0187771_111652041	3300018088	Tropical Peatland	MMSLNQLEMQALGSITDGLAGSDPRLACMLTISIRLAAGEEMPAREKTRVRPGRPAAHRPGRARRHPRRDTALPQARQLYPRLGRQQAMLVLW
Ga0210399_102855792	3300020581	Soil	MSLNEPQIQALGWIEDSLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRAAAPRPRRARRHPRWRIALPQPRRLYPRLGLQQAMLLLWVVISAGALAVALVLNTSGH
Ga0210395_103689281	3300020582	Soil	MMSLNGPQMQALGWIEDSLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRAAAPRPRRARRHPRWRIALPQPRRLYPRLGLQQAMLLLWVVISAGALAVALVLNASGH
Ga0210397_114059432	3300021403	Soil	MMSLNEPQMQALGWIEDSLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRPAAPRPRRARRHPRWRIALPQPRRLYPRLGLQQAMLLLWVVISAGALAVALVLNA
Ga0210383_107587532	3300021407	Soil	EDSLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRAAAPRPRRARRHPRWRIALPQPRRLYPRLGLQQAMLLLWVVISAGALAVALVLNASGH
Ga0210384_109249742	3300021432	Soil	MQALGWIEDSLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRAAAPRPRRARRHPRWRIALPQPRRLYPRLGLQQAMLLLWVVISAGALAVALVLNTSGH
Ga0126371_128232621	3300021560	Tropical Forest Soil	MPHPDVMMMSLTEPETQALGTIEHGLAGSDPRLASMLSIFSRLAAGEEMPADEKIRIRRGRPAAHRPRRAGRHPRRGTAFPLARRPYLRLGRPQAILLLWAVTTAALLTIALLLNTSGDNACTQSVRTACPSAP
Ga0179587_105439242	3300026557	Vadose Zone Soil	MMSLNEPQRQALGSIADGLAGSDPRLASMLDIFSRLAAGEEMPVRETIQVRRGRPAAHRPSRARRHPRRGRALPQARWLYPRLGRQQAMLLLWVVISAGLLAVALVLNTSGQKACIRSM
Ga0209415_100666002	3300027905	Peatlands Soil	MSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRERPAAHRPRRAQRHPHRGIAPPQARRPYPRLGLQQTMLLLWVVITAGMLAVALVLNTSGH
Ga0209062_10807922	3300027965	Surface Soil	MSLNEPEWHGLAGSDPMLASMLNIFSRLAAGEEMPVGEKIRVRSGRPPAHRPRRARRHQRRGTVLPQARRLYLRLGLQQAMLLLWAVITAGMLAVALILNTSGH
Ga0310037_102058271	3300030494	Peatlands Soil	MSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRERPAAHRPRRAQRHPHRGIAPPQARRPYPRLGLQQTMLLLWVVITAGMLAVALVLN
Ga0170834_1005985381	3300031057	Forest Soil	MMSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAVGEEMPAGEKIRVRRGRPAAPRPAAPALRHSPPQARRLYPRLGLQQAMLLLWVVITAGMLAVPLVLNTSGH
Ga0318516_100034175	3300031543	Soil	MMSPNETEMQALGWIEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVALVLNTSGH
Ga0318516_100228584	3300031543	Soil	MMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318516_103160381	3300031543	Soil	MMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRPGANRPRRAWRHPHRDIVFPQARRLYPHLGLPLAMLLLWVVISAGMV
Ga0318516_104078631	3300031543	Soil	MNLNESETQALGSIADGLAGSDPRLASMLNIFGRLAAGEEMPVREKIRVRHGRPAAHRPRRARRHPRGGVPPRQASRLYLRLGWQSAMLLLWAVISAALLAAALVLNTSGHKACIQSM
Ga0318516_104780591	3300031543	Soil	LAGSDPRLAAMLTIFSRLAAGEEMPAREEIRVRRGRPAAHRLRRARRHPRGIALPQARRLYPRLGLQQALLLLWVVTSAGALAVALVLSTSGH
Ga0318534_100730452	3300031544	Soil	MMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318534_101574262	3300031544	Soil	MMSQNEPKMQDLGGLEDGLADSDLRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAADRPRRARRHPRGIALPQARRLYPRLGLQQAMLLLWVVISAGALAVALVLSTSGH
Ga0318534_107182152	3300031544	Soil	PNEPEMQALGWIEDGLAGSDPGLASMLNIFSRLAAGEEMPVGEKIRVTRGRPTARRPRGAPRHLRLSLQQAMVLLWVVITAALLAVALVLNTGGH
Ga0318538_101521694	3300031546	Soil	MMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVFSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318538_101891462	3300031546	Soil	MMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318515_100541102	3300031572	Soil	MMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRPGANRPRRAWRHPHRDIVFPQARRLYPHLGLPLAMLLLWVVISAGMVAVALVLNTSGH
Ga0318515_103438121	3300031572	Soil	RQDLGGIADGLADSDPGLASMLTIFSRLAAGEEMPARETVRVQRGRPAARRPRRARRHPRGIALPQARRLYPRLGLQQALLLLWVVTSAGALAVALVLSTSGH
Ga0310915_109243211	3300031573	Soil	AATAHAPTLDVMMMSLTEPETQALGTIEHGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHHPRRARRHPRGIALPQARRLYPRLGLQQAMLLLWVVITAGALAVALVLSTSGH
Ga0318555_106368041	3300031640	Soil	HTPAPDVMMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318561_100331441	3300031679	Soil	LPPALPPSTVLTSDMHPKAGIAHAPVSDVMMMSLNEPQKQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318561_104800841	3300031679	Soil	MMNLNEPEMQALGWIEDSLAGSDPRLASMLTIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYPRLGLQQAMVLLWVVITAGLLAVALVLN
Ga0318574_109042551	3300031680	Soil	MMSFTELERQALGSIADGLAGSDPRLASMLTIFSRLAAGEEMPVREKTRVRRGWSAAHRRCRARRHPRRGIAFPQPRRLYVRLGWQQAMLLLGIVISAALLT
Ga0318560_100599661	3300031682	Soil	MMSLNEPHRQALGSIEDGLAGSDPRLASMLTIFSRLAAGEEMPAREKIPLRRRRPAAHRPSRTRRYPRPGRAFPQPHRQYPRLGWQQAMLLLWVVISAGLVAVALVLNNSGHKACIQSMGTVCSSPS
Ga0310686_1022352601	3300031708	Soil	MSLNEPQMQALSWIEDGLAGSDPRLASMLNIFSRLAVGEEMPVREKIRVRRERPAAHRPRRAQRHPHRGIAPPQARRPYPRLGLQQTTLLLWVVITAGMLAVALVLNTSGH
Ga0310686_1031448201	3300031708	Soil	MMSLNEPQMQALGWIEDSLAGSDPRLASMLNIFSRLAAGEEMPAREKIRIRRERPTAPRPRRTRPHPRRGIALPQPRRLYPRLGLQQAMLLLWVVISAGALAVALVLNTSGH
Ga0310686_1188234181	3300031708	Soil	MSLNEPQMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGQPAAHRPRRARRHPRWGIALPQAHRLYPRLGLQQAMLLLWDVITAGMLAVAPVLNTSGH
Ga0318496_100018033	3300031713	Soil	MMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRWAPGRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318496_105713911	3300031713	Soil	QDLGGLEEGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHHPRRARRHPRGIALPQARRLYPRLGLQQAMLLLWVVISAGALAVALVLSTSGH
Ga0306917_109252761	3300031719	Soil	MSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRPGANRPRRAWRHPHRDIVFPQARRLYPHLGLPLAMLL
Ga0318493_101100072	3300031723	Soil	MMSQNEPEMQALGGLEEGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHHPRRARRHPRGIALPQARRLYPRLGLQQAMLLLWVVISAGALAVALVLSTSGH
Ga0318501_104185941	3300031736	Soil	MMSLNEPHRQALGSIEDGLAGSDPRLASMLTIFSRLAAGEEMPAREKIPLRRRRPAAHRPSRTRRYPRPGRAFPQPHRQYPRLGWQQAMLLLWVVISAGLVAVALVLNNSGHKACIQSMGTVC
Ga0318492_103564442	3300031748	Soil	MMMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318494_102183242	3300031751	Soil	MMSQNEPEMQDLGGLEEGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHHPRRARRHPRLGLQQAMLLLWVVITAAVLAVALVLNTSGH
Ga0318535_103592011	3300031764	Soil	PDVMMMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318535_104078641	3300031764	Soil	PGSPPALATKHGLDQRRAPMADTAHAPTLEVMMMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318554_105422111	3300031765	Soil	MMSPNEPEMQALGWIEDGLAGSDPGLASMLNIFSRLAAGEEMPVGEKIRVTRGRPTARRPRGAPRHLRLSLQQAMVLLWVV
Ga0318509_106489591	3300031768	Soil	QKQALGWIEDGLAGSDPGLAAMLTIFSRLAAGEEMPAREEIRVRRGRPAAHRPRRARRHPRLGVQQAMVLLWVVISAGLLAVALVLSTSGHQGCIQSMGTACPSPR
Ga0318546_104352111	3300031771	Soil	MSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRPGANRPRRAWRHPHRDIVFPQARRLYPHLGLPLAMLLLWVVISAGMVAVALVLNTSGH
Ga0318543_105148551	3300031777	Soil	IEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318547_100141552	3300031781	Soil	MMSPNDTEMQALGWIEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVALVLNTSGH
Ga0318547_108930492	3300031781	Soil	MMSLNEPHRQALGSIEDGLAGSDPRLASMLTIFSRLAAGEEMPAREKIPLRRRRPAAHRPSRTRRYPRPGRAFPQPHRQYPRLGWQQAMLLLWVVISAGLVAVALVLNNSGHKACIQSMGTVCSS
Ga0318552_106366541	3300031782	Soil	RQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318523_101848542	3300031798	Soil	MMSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318565_105977512	3300031799	Soil	EDSLAGSDPRLASMLTIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYPRLGLQQAMVLLWVVITAGLLAVALILNTSGH
Ga0318568_100498023	3300031819	Soil	MMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVFSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318567_102170412	3300031821	Soil	MSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318517_102737902	3300031835	Soil	MMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMP
Ga0318511_101330801	3300031845	Soil	MMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMTATRFL
Ga0318511_101629792	3300031845	Soil	MMSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPAGEKIRVRRGRPGANRPRRAWRHPHRDIVFPQARRLYPHLGLPLAMLLLWVVISAGMVAVALVLNTSGH
Ga0306919_105309341	3300031879	Soil	MMSLNEPHRQALGSIEDGLAGSDPRLASMLTIFSRLAAGEEMPAREKIPLRRRRPAAHRPSRTRRYPRPGRAFPQPHRQYPRLGWQQAMLLLWVVISAGLVAVALVLNNSGHKACIQSMGTVCPSPS
Ga0306925_104688342	3300031890	Soil	MMSFTELDTQALGSIADGLAGSDPRLASMLNIFSRLVAGEEMPAREKTRIQGGRMTAHRPRHARRHPRAGTARPQPRRLYPRLGWPQSMLLLWAVTTAALLTIALLLNTSGYNACTQ
Ga0318536_103206751	3300031893	Soil	AHAPTLEVMMMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSG
Ga0306923_102600323	3300031910	Soil	MSFTEPEMQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0306923_108964121	3300031910	Soil	VMMMSQNEPEMQALGWLEEGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHHPRRARRHPRGIALPQARRLYPRLGLQQAMLLLWVVISAGALAVALVLSTSGH
Ga0310916_103607211	3300031942	Soil	IEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWVVSTAGLLAVALVLNTSGH
Ga0310913_108797901	3300031945	Soil	SRQAGLDQRHAPRAGTAHTPAPDVMMMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0310910_100673812	3300031946	Soil	MMSPNETEMQALGWIEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVALILNTSGH
Ga0310909_101170512	3300031947	Soil	MPPTLDVMTMSLTEPETQALGTIEHGLAGSDPRLASMLNIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318531_102418492	3300031981	Soil	MMSPNETEMQALGWIEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVAL
Ga0306922_101753821	3300032001	Soil	MMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMG
Ga0318562_100460201	3300032008	Soil	NETEMQALGWIADSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVALVLNTSGH
Ga0318563_103820941	3300032009	Soil	MMSQNEPEMQDLGGLEEGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHHPRRARRHPRLGLQQAMLLLWVVIPPGRHLRVTPRAGGNPYRFPKSRANGAGLLPSATRDGG
Ga0318569_102895472	3300032010	Soil	MMMSLNEPKRQDLGGIADGLADSDPGLASMLTIFSRLAAGEEMPARETVRVQRGRPAARRPRRARRHPRGIALPQARRLYPRLGLQQALLLLWVVTSAGALAVALVLSTSGH
Ga0318545_102853392	3300032042	Soil	MSLNHLERQALGAIADGLAGSDPRLASMLTIFSRLATGEEMPARQTTRARFGRPAVFRPRRARRHPRRGIAVPHARRRSPRLGWPPALLVLGAVICAALLTA
Ga0318570_102651862	3300032054	Soil	MMSQNEPEMQDLGGLEEGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHHPRRARRHPRLGLQQATLLLWVVISAGLLAVALVLSTSGHQGCIQSMGTACPSPR
Ga0318575_102993582	3300032055	Soil	MQALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVRERIRVRRGRPGAHRPRLAWRHPHRGTVFPQPRRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318533_103852072	3300032059	Soil	MMSLTEPETQALGAIAHGLTGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318533_105168581	3300032059	Soil	MMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLN
Ga0318504_105160672	3300032063	Soil	MMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTGGHQACTRSMG
Ga0318510_104614021	3300032064	Soil	QRHAPRAGTAHTPAPDVMMMMSLTEPHRQALGSIEDDLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318514_101573602	3300032066	Soil	MMMSLTEPHRQALGSIEDDLAGSDPSLASMLTIFSRLAAGQEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVFSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0306924_105299871	3300032076	Soil	RQDLGGIADGLADSDPGLASMLTIFSRLAAGEEMPARETVRVQRGRPAARRPRRARRHPRGIALPQARRLYPRLGLQQAMLLLWVVISAGALAVALVLSTSGH
Ga0306924_105453252	3300032076	Soil	MSFNEPHGQALGAIADGLAGSDPRLASMLTIFSRLAAGEEMPAREKIPVRRRRPAAHRPRRTRRHPCPGRALPQPHRLYPRLGLLLWVVISGGLLAVALVLSNSGHKACIQSMGRCAPPLPSHSMPMRPP
Ga0318525_100639922	3300032089	Soil	MMSFTEPEMQTLGWIEDGLAGSDPRLASMLNIFSRLAVGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318518_101916802	3300032090	Soil	IEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPGAHRPRRAWQHPHRGTALPQARRLYPHLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0318540_104684172	3300032094	Soil	MMMSPNETEMQALGWIEDSLAGSDPRLASMLHIFSRLAAGEEMPAGERIRVTRGRSAAHRPRRARSHPRRGIASPQARRLYRRLGLQQAMVLLWAVSTAGLLAVALVLNTSGH
Ga0306920_1036374341	3300032261	Soil	MSFTEPEMYALGWIEDGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAAHRPRRAWRHPRRGTVLPQARRLYPRLGLPLAMVLLWVVISAGMVAVALVLNTSGH
Ga0310914_112462642	3300033289	Soil	DLGGLKEGLAGSDPRLASMLNIFSRLAAGEEMPVREKIRVRRGRPAADRPRRARRHPRGIALPQARRLYPRLGLQQAMLLLWVVISAGALAVALVLSTSGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences