Metagenome / Metatranscriptome Family F083562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083562
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	69 residues
Representative Sequence	MSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Number of Associated Samples	64
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.32 %
% of genes near scaffold ends (potentially truncated)	31.25 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (33.929 % of family members)
Environment Ontology (ENVO)	Unclassified (40.179 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.19% β-sheet: 37.11% Coil/Unstructured: 56.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
b.34.5.0: Translation proteins SH3-like domain	d3a5zb1	3a5z	0.68
b.34.5.0: Translation proteins SH3-like domain	d3a5zb1	3a5z	0.68
b.34.5.0: Translation proteins SH3-like domain	d6s8za1	6s8z	0.67
b.34.5.0: Translation proteins SH3-like domain	d6s8za1	6s8z	0.67
b.34.5.0: Translation proteins SH3-like domain	d3hksa1	3hks	0.66
b.34.5.0: Translation proteins SH3-like domain	d3hksa1	3hks	0.66
b.34.5.2: Translation proteins SH3-like domain	d1bkba1	1bkb	0.65
b.38.4.1: Dom34/Pelota N-terminal domain-like	d2qi2a1	2qi2	0.65
b.34.5.2: Translation proteins SH3-like domain	d1bkba1	1bkb	0.65
b.38.4.1: Dom34/Pelota N-terminal domain-like	d2qi2a1	2qi2	0.65

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00255	GSHPx	33.93
PF13577	SnoaL_4	9.82
PF00106	adh_short	2.68
PF13245	AAA_19	2.68
PF13474	SnoaL_3	2.68
PF00990	GGDEF	2.68
PF00580	UvrD-helicase	1.79
PF13361	UvrD_C	1.79
PF00441	Acyl-CoA_dh_1	0.89
PF01070	FMN_dh	0.89
PF01053	Cys_Met_Meta_PP	0.89
PF04264	YceI	0.89
PF10604	Polyketide_cyc2	0.89
PF01042	Ribonuc_L-PSP	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	33.93
COG3973	DNA helicase IV	Replication, recombination and repair [L]	1.79
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	1.79
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	1.79
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.89
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.89
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.89
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.89
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.89
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.89
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.89
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.89
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.89
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.89
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.89
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.89
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.89
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.89
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.89
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	7.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.36 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	1.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	4.46 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.68 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	2.68 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	4.46 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.68 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2.68 %
Euzebyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	4.46 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.79 %
Euzebya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	4.46 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2.68 %
Streptomyces himalayensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces himalayensis	1.79 %
Euzebya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10640185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300004092\|Ga0062389_104035150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces himalayensis	552	Open in IMG/M
3300004092\|Ga0062389_104886949	Not Available	505	Open in IMG/M
3300004092\|Ga0062389_104907783	Not Available	504	Open in IMG/M
3300004635\|Ga0062388_100144533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1793	Open in IMG/M
3300004635\|Ga0062388_102308450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces himalayensis	562	Open in IMG/M
3300009633\|Ga0116129_1135284	Not Available	704	Open in IMG/M
3300009665\|Ga0116135_1500565	Not Available	504	Open in IMG/M
3300010371\|Ga0134125_11533871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300010379\|Ga0136449_101740844	Not Available	936	Open in IMG/M
3300010880\|Ga0126350_11469928	Not Available	648	Open in IMG/M
3300011120\|Ga0150983_13782009	Not Available	532	Open in IMG/M
3300014156\|Ga0181518_10477614	Not Available	593	Open in IMG/M
3300014159\|Ga0181530_10134272	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300014162\|Ga0181538_10252519	Not Available	971	Open in IMG/M
3300014167\|Ga0181528_10491768	Not Available	674	Open in IMG/M
3300014169\|Ga0181531_10198528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1218	Open in IMG/M
3300014169\|Ga0181531_10348284	Not Available	909	Open in IMG/M
3300014200\|Ga0181526_10161206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1438	Open in IMG/M
3300014201\|Ga0181537_10142135	Not Available	1644	Open in IMG/M
3300014201\|Ga0181537_10204448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
3300014489\|Ga0182018_10146775	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300014489\|Ga0182018_10355365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300014489\|Ga0182018_10387620	Not Available	749	Open in IMG/M
3300014493\|Ga0182016_10080438	All Organisms → cellular organisms → Bacteria	2376	Open in IMG/M
3300014493\|Ga0182016_10172930	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300014493\|Ga0182016_10271248	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300014495\|Ga0182015_10017206	All Organisms → cellular organisms → Bacteria	6063	Open in IMG/M
3300014495\|Ga0182015_10197211	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300014499\|Ga0182012_10046479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3534	Open in IMG/M
3300014499\|Ga0182012_10201872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300014499\|Ga0182012_10624161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	692	Open in IMG/M
3300014501\|Ga0182024_10107246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4043	Open in IMG/M
3300014501\|Ga0182024_10345108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1947	Open in IMG/M
3300014501\|Ga0182024_10678339	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300014501\|Ga0182024_10761381	Not Available	1186	Open in IMG/M
3300014501\|Ga0182024_11623437	Not Available	732	Open in IMG/M
3300014654\|Ga0181525_10282420	Not Available	906	Open in IMG/M
3300014654\|Ga0181525_10580794	Not Available	624	Open in IMG/M
3300014655\|Ga0181516_10452068	Not Available	658	Open in IMG/M
3300014658\|Ga0181519_10220181	Not Available	1191	Open in IMG/M
3300014838\|Ga0182030_10103755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3902	Open in IMG/M
3300014838\|Ga0182030_10568023	Not Available	1106	Open in IMG/M
3300014838\|Ga0182030_10731523	Not Available	920	Open in IMG/M
3300014838\|Ga0182030_11078881	Not Available	698	Open in IMG/M
3300017946\|Ga0187879_10172760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1216	Open in IMG/M
3300017946\|Ga0187879_10800805	Not Available	526	Open in IMG/M
3300018017\|Ga0187872_10427503	Not Available	557	Open in IMG/M
3300018033\|Ga0187867_10198618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1141	Open in IMG/M
3300018034\|Ga0187863_10263148	Not Available	958	Open in IMG/M
3300018044\|Ga0187890_10326566	Not Available	861	Open in IMG/M
3300018044\|Ga0187890_10720295	Not Available	563	Open in IMG/M
3300018046\|Ga0187851_10888241	Not Available	500	Open in IMG/M
3300018057\|Ga0187858_10100704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1973	Open in IMG/M
3300019787\|Ga0182031_1531872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	2694	Open in IMG/M
3300023090\|Ga0224558_1006425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8200	Open in IMG/M
3300025633\|Ga0208480_1120272	Not Available	611	Open in IMG/M
3300027692\|Ga0209530_1230929	Not Available	505	Open in IMG/M
3300027895\|Ga0209624_10147452	Not Available	1554	Open in IMG/M
3300028747\|Ga0302219_10285427	Not Available	642	Open in IMG/M
3300028789\|Ga0302232_10057606	Not Available	2046	Open in IMG/M
3300028789\|Ga0302232_10188417	Not Available	1031	Open in IMG/M
3300028789\|Ga0302232_10372436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	703	Open in IMG/M
3300028789\|Ga0302232_10393413	Not Available	682	Open in IMG/M
3300028789\|Ga0302232_10504010	Not Available	595	Open in IMG/M
3300028789\|Ga0302232_10684748	Not Available	504	Open in IMG/M
3300028808\|Ga0302228_10519773	Not Available	524	Open in IMG/M
3300028813\|Ga0302157_10111155	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300028879\|Ga0302229_10077411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1601	Open in IMG/M
3300029907\|Ga0311329_10411938	Not Available	942	Open in IMG/M
3300029922\|Ga0311363_10962639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya	755	Open in IMG/M
3300029943\|Ga0311340_10414726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1233	Open in IMG/M
3300029951\|Ga0311371_10778455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1183	Open in IMG/M
3300029951\|Ga0311371_11759256	Not Available	672	Open in IMG/M
3300029953\|Ga0311343_11017749	Not Available	649	Open in IMG/M
3300029999\|Ga0311339_10267482	Not Available	1867	Open in IMG/M
3300029999\|Ga0311339_10694412	Not Available	996	Open in IMG/M
3300029999\|Ga0311339_11370635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	637	Open in IMG/M
3300030007\|Ga0311338_11075643	Not Available	774	Open in IMG/M
3300030007\|Ga0311338_11696014	Not Available	574	Open in IMG/M
3300030503\|Ga0311370_10192318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2756	Open in IMG/M
3300030503\|Ga0311370_10524241	Not Available	1444	Open in IMG/M
3300030503\|Ga0311370_10648207	Not Available	1253	Open in IMG/M
3300030503\|Ga0311370_10705784	Not Available	1183	Open in IMG/M
3300030509\|Ga0302183_10415294	Not Available	515	Open in IMG/M
3300030520\|Ga0311372_11586585	Not Available	799	Open in IMG/M
3300030617\|Ga0311356_11017710	Not Available	773	Open in IMG/M
3300030618\|Ga0311354_11317400	Not Available	647	Open in IMG/M
3300031027\|Ga0302308_10106539	Not Available	1905	Open in IMG/M
3300031028\|Ga0302180_10299882	Not Available	829	Open in IMG/M
3300031234\|Ga0302325_10299052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2615	Open in IMG/M
3300031234\|Ga0302325_10346198	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300031234\|Ga0302325_10608152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1607	Open in IMG/M
3300031234\|Ga0302325_11343816	Not Available	935	Open in IMG/M
3300031234\|Ga0302325_12161728	Not Available	679	Open in IMG/M
3300031234\|Ga0302325_13412123	Not Available	501	Open in IMG/M
3300031236\|Ga0302324_101038463	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300031236\|Ga0302324_101859629	Not Available	762	Open in IMG/M
3300031236\|Ga0302324_102555691	Not Available	622	Open in IMG/M
3300031236\|Ga0302324_103203221	Not Available	538	Open in IMG/M
3300031525\|Ga0302326_10376074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2217	Open in IMG/M
3300031670\|Ga0307374_10005185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21224	Open in IMG/M
3300031708\|Ga0310686_100256312	Not Available	2732	Open in IMG/M
3300031708\|Ga0310686_104625002	Not Available	713	Open in IMG/M
3300031708\|Ga0310686_106485179	Not Available	516	Open in IMG/M
3300031708\|Ga0310686_111166858	Not Available	671	Open in IMG/M
3300031708\|Ga0310686_113008578	Not Available	558	Open in IMG/M
3300031708\|Ga0310686_116004548	Not Available	541	Open in IMG/M
3300032160\|Ga0311301_11528127	Not Available	820	Open in IMG/M
3300034124\|Ga0370483_0085843	Not Available	1026	Open in IMG/M
3300034282\|Ga0370492_0165400	Not Available	904	Open in IMG/M
3300034282\|Ga0370492_0292522	Not Available	661	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.21%
Aquatic	Environmental → Aquatic	26.79%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	38.39%
Soil	Environmental → Terrestrial → Soil	34.82%
Freshwater	Environmental → Aquatic → Freshwater	26.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	38.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.82%
Loam	Environmental → Terrestrial → Soil → Loam	2.68%
Clay	Environmental → Terrestrial → Soil → Clay	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	38.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	25.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	18.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	33.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.61%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	9.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.04%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.36%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	4.46%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	4.46%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_106401852	3300004080	Bog Forest Soil	MSDTWKTVKAQDVKAGDTVRTQSGAVVIVSRIEAPFLGRSNMVAFIEDTPDRWFKQPVMSDSDVEVRAANA*
Ga0062389_1040351502	3300004092	Bog Forest Soil	WKTVKAQDVKAGDTVRTQSGAVVIVSRIEAPFLGRSNMVAFIEDTPDRWFKQPVMSDSDVEVRAANA*
Ga0062389_1048869492	3300004092	Bog Forest Soil	MSDTWKAVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADADVEVLSS*
Ga0062389_1049077832	3300004092	Bog Forest Soil	MSDTWKAVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS*
Ga0062388_1001445332	3300004635	Bog Forest Soil	MSDTWKTVKAQEVKVGDTVRTPSGQVVLVSRVEAPFLGRSNMVAFIEDTPDRWFKQPVPSDSDVEVRAATA*
Ga0062388_1023084501	3300004635	Bog Forest Soil	SDTWKTVKAQDVKAGDTVRTQSGAVVIVSRIEAPFLGRSNMVAFIEDTPDRWFKQPVMSDSDVEVRAANA*
Ga0116129_11352842	3300009633	Peatland	MSESWKTVKATEVRPGDAVRTQTGAVVLVSRVDASFLGMPNMLAFVEDTPDRWFKQPMMADAEVEVRA*
Ga0116135_15005652	3300009665	Peatland	MSDTWKSVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFVEDTPDRWFKQPMMADAEVEVLSS*
Ga0134125_115338711	3300010371	Terrestrial Soil	MSDSWKKVKAGDVLPGSEVRIQTGDIVIASRVESSFMGMPNMVAFIEDTPDRWFKQPMMADAEVEIRS*
Ga0136449_1017408442	3300010379	Peatlands Soil	MSETWKKVKANEVRAGDTVRTQSGSVVLVSRIETGFMGRPEMFAFIEDTPDRWFKQPMMADAEVEVRS*
Ga0126350_114699281	3300010880	Boreal Forest Soil	DEVRAGDAVRTQGGDVVTVSRIESSFMGMPNMLAFIEDTADRWFKQPLMADSEVEVRA*
Ga0150983_137820092	3300011120	Forest Soil	MSETWKKVKADEVREGDTVRTQSGSVVLVSRIEDGFMGRPGMFAFIEDTPDRWFKQPMIADAEVEVRS*
Ga0181518_104776141	3300014156	Bog	RGRRIGPAELGGGTFTMSETWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEIEVLSS*
Ga0181530_101342722	3300014159	Bog	MSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0181538_102525191	3300014162	Bog	MSETWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEIEVLSS*
Ga0181528_104917681	3300014167	Bog	EKVKAGDSVRTQSGDVVIVSRIEQSFMGLPTMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0181531_101985281	3300014169	Bog	MSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPTMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0181531_103482842	3300014169	Bog	MSESWKKVKADEVRAGDAVRTQAGDVVTVSRVESSFLGMPNMLAFIEDTPERWFKQPMMADAEVEVRV*
Ga0181526_101612062	3300014200	Bog	MSDTWTKVTAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0181537_101421353	3300014201	Bog	MSDTWKTVKAETVKTGDSVRMPSGDVVIVSRIEQSFMGLPNMVAFIEDTPDRWFKQPMMADAEVEVLSS*
Ga0181537_102044482	3300014201	Bog	MAESWTTVKAHDVKAGDTVRTPSGQVVVVSRIEAPFLGMSNMVAFIEDTPDRWFKQPVTSDSDVEIRN*
Ga0182018_101467753	3300014489	Palsa	RRIDPAELKGGIVTMSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS*
Ga0182018_103553652	3300014489	Palsa	MSENWKTVKAEVVRPGDAVRTQSGDVVTVSRVEKSFLGLPNMLAFIEDTPDRWFKQPMMADADVEVRSS*
Ga0182018_103876202	3300014489	Palsa	MPDNWRTVKAQDVKAGDTVRTQSGAVLIVSRIETPFLGRSNMVAFIEDTSDRWFKQPMMSDSDVEIRATA*
Ga0182016_100804382	3300014493	Bog	MSDTWKTVTAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0182016_101729301	3300014493	Bog	KVKAGDSVRTQSGDVVIVSRIEQSFMGLPTMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0182016_102712481	3300014493	Bog	EVLPNHHQSNEGEAVTVSESWKKVKADEVRVGDAVRTQAGDVVVVSRIETGFMGMPNMLAFIEDTPDRWFKQPMMADGEVEVRS*
Ga0182015_100172064	3300014495	Palsa	MSDTWKTVKAEKVQTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS*
Ga0182015_101972113	3300014495	Palsa	MSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS*
Ga0182012_100464792	3300014499	Bog	MPESWKTVKVDEVKAGDEVRTPSGDVLIVSRIEKPFLGLPNMVAFIQDTADRWFKQPLMTDADIEVRSI*
Ga0182012_102018723	3300014499	Bog	SLTMSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0182012_106241612	3300014499	Bog	VKADEVRVGDAVRTQAGDVVVVSRIETGFMGMPNMLAFIEDTPDRWFKQPMMADGEVEVRS*
Ga0182024_101072461	3300014501	Permafrost	MSESWKKVKAGEVKAGDAIRTQTGDVVTVSRIESSFMGRPNMLAFIEDTADRWFKQPMMADAEVEVRT*
Ga0182024_103451082	3300014501	Permafrost	MSESWKKVKADEVRAGDAVRTQAGAVVIVSRVESSFLGMPNMLAFIEDTPERWFKQPMMADAEVEVRS*
Ga0182024_106783392	3300014501	Permafrost	MSDTWKSVKAEKVKSGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS*
Ga0182024_107613812	3300014501	Permafrost	MSDTWKTVKAEEVKAGDAVRTQSGDVVTVSRIETSFMGLPNMLAFIEDTPDRWFKQPMMAGADVEVRSS*
Ga0182024_116234372	3300014501	Permafrost	MSDTWRTVKAEQVKAGDAVRTQSGDVVTVSRIETSFMGLPNMLAFIEDTADRWFKQPMMADADVEVRTS*
Ga0181525_102824202	3300014654	Bog	KAGDSVRTQSGDVVIVSRIEQSFMGLPTMLAFIEDTPDRWFKQPMMADTEVEVLSS*
Ga0181525_105807941	3300014654	Bog	MSESWKKVKAGEVRAGDAVRTQAGDVVTVSRVESSFMGMPNMLAFIEDTPERWFKQPMMADAEVEVRS*
Ga0181516_104520682	3300014655	Bog	MSDTWKTVKAETVKTGDSVRMPSGDVVIVSRIEQSFMGLPNMVAFIEDTPDRWFKQPM
Ga0181519_102201813	3300014658	Bog	MSETWKTVKADQVKEGDAVRTASGDVVMVSRIETSFMGMPNMLAFIEDTPDRWFKQPVLAESDIEVRTS*
Ga0182030_101037552	3300014838	Bog	MSESWKKVKAEDVRAGDAVRTQAGDVVTVSRVESSFLGMPNMLAFIEDTPERWFKQPMMADAEVEVRS*
Ga0182030_105680232	3300014838	Bog	MSESWKTVKADEVRTGDAIRTKTGDVVIVSHIEESFLGRPNMVAFIEDTADRWFKQPMPTDADVEVRVASA*
Ga0182030_107315232	3300014838	Bog	MSDTWNTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS*
Ga0182030_110788812	3300014838	Bog	VSESWKKVKADEVRVGDAVRTQAGDVVVVSRIETGFMGMPNMLAFIEDTPDRWFKQPMMADGEVEVRS*
Ga0187879_101727603	3300017946	Peatland	MSDTWTKVTAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0187879_108008051	3300017946	Peatland	ITTRITNRKRGARVIMSESWKKVKAGEVRAGDTVRTQAGEVVIVSRIDSSFLGMPNMLAFIEDTPERWFKQPVTADTEVEVRS
Ga0187872_104275031	3300018017	Peatland	MSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0187867_101986182	3300018033	Peatland	MSDTWTKVTAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMTDTEVEVLSS
Ga0187863_102631482	3300018034	Peatland	MSDTWKAVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0187890_103265661	3300018044	Peatland	RRIGPAELGGGTFTMSDTWTKVTAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0187890_107202951	3300018044	Peatland	MSESWKKVKADEVRAGDAVRTQAGDVVTVSRIESSFLGMPNMLAFIEDTPERWFKQPMMADAEVE
Ga0187851_108882411	3300018046	Peatland	LKGGIVTMSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0187858_101007041	3300018057	Peatland	EKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0182031_15318723	3300019787	Bog	MSDTWNTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0224558_10064255	3300023090	Soil	MSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0208480_11202723	3300025633	Arctic Peat Soil	MSDTWKTAKARDVKAGDTVRAQSGAVIEAPFLGLSNMVAFIEDTPDRWFEQPVVSESEVEIRTTSP
Ga0209530_12309291	3300027692	Forest Soil	MSDTWKTVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMPADAEVEVRA
Ga0209624_101474523	3300027895	Forest Soil	MPDNWRTVKAQDVKAGDTVRTQSGAVLIVSRIETPFLGRSNMVAFIEDTSDRWFKQPMMSDSDVEIRAVPA
Ga0302219_102854272	3300028747	Palsa	MSENWKTVKAEAVRPGDAVRTQSGDVVTVSRVEKAFLGLPNMLAFIEDTPDRWFKQPMMADADVEVRSS
Ga0302232_100576062	3300028789	Palsa	MSETWKTVKASDVRVGDAVRTRTGDVVTVSRIESAFFGRPGMLAFIEDTPDRWFKQPMPDDADVEVRSGS
Ga0302232_101884172	3300028789	Palsa	MADTWKTVKAEQVKAGETVRTQSGSVVIVSRIETSFMGMPNMLAFIEDTPDRWFKQPMTADADVEVRSS
Ga0302232_103724361	3300028789	Palsa	MASDTWKTVKAEQVKAGDTVRTQSGSVVIVSRVEKSFMGLPNMLAFIEDTEDRWFKQPLTADADVEVRSS
Ga0302232_103934131	3300028789	Palsa	MSDTWKAVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGMPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0302232_105040101	3300028789	Palsa	QTNRAIEWRRGPFAMSENWKTVKAEAVRPGDAVRTQSGDVVTVSRVEKAFLGLPNMLAFIEDTPDRWFKQPMMADADVEVRSS
Ga0302232_106847481	3300028789	Palsa	MSDTWKSVKADAVRAGDTVRIQSGQVFLVSRLENPFLGLPTMLAFIEDTPDRWFKQPMLVDADVEVRTD
Ga0302228_105197731	3300028808	Palsa	WKTVKASDVRVGDAVRTRTGDVVTVSRIESAFFGRPGMLAFIEDTPDRWFKQPMPDDADVEVRSGS
Ga0302157_101111552	3300028813	Bog	MSDTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPTMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0302229_100774113	3300028879	Palsa	SNARTMSETWKTVKASDVRVGDAVRTRTGDVVTVSRIESAFFGRPGMLAFIEDTPDRWFKQPMPDDADVEVRSGS
Ga0311329_104119382	3300029907	Bog	KTVTAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0311363_109626391	3300029922	Fen	VSESWKKVKADEVRVGDAVRTQAGDVVVVSRIETGFMGMPNMLAFIEDTPDRWFKQPMMADGEVEVRS
Ga0311340_104147261	3300029943	Palsa	MASDTWKTVKAEQVKAGDTVRTQSGSVVIVSRVEKSFMGLPNMLAFIEDTEDRWFKQPLTADSDVEVRSS
Ga0311371_107784552	3300029951	Palsa	VKAEAVRPGDAVRTQSGDVVTVSRVEKAFLGLPNMLAFIEDTPDRWFKQPMMADADVEVRSS
Ga0311371_117592562	3300029951	Palsa	MSDTWKTVKAEKVQTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTADRWFKQPMMADAEVEVLSS
Ga0311343_110177492	3300029953	Bog	DTWKTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPTMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0311339_102674823	3300029999	Palsa	MSDTWKTVKAEKVQTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0311339_106944121	3300029999	Palsa	ELGGGTFTMSDTWKAVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGMPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0311339_113706351	3300029999	Palsa	MAESESWKKVKADEVRAGDAVRLQSGDVVLVSRIESSFMGRPNMLAFIEDTPERWFKQPMTSDGEVEVRS
Ga0311338_110756431	3300030007	Palsa	MAESWKKVKAESVRAGDAVRTQSGEVVTVSRIEKSFLGLPNMLAFIEDTPDRWSKQPIMADADVEV
Ga0311338_116960142	3300030007	Palsa	MSENWKKVKAEAVRPGDAVRTQAGDVVTVSRVEKSFLGLPNMLAFIEDTPDRWFKQPMMADAEVEVRSS
Ga0311370_101923183	3300030503	Palsa	MSDTWKTVKADQVQAGDAVRTKTGDVVIVSRIDTSFMGMPNMLAFIEDTADRWFKQPMGADADVEVRVS
Ga0311370_105242412	3300030503	Palsa	MADTWKTVKAEQVKAGDTVRTQAGNEVIVSRIDSSFMGMPNMLAFIEDTPDRWFKQPMTADADVEVRAS
Ga0311370_106482074	3300030503	Palsa	GDSVRTQSGDVVIVSRIEQSFMGMPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0311370_107057842	3300030503	Palsa	MSDTWKTVKAEKVQTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMAHAEVEVLSA
Ga0302183_104152942	3300030509	Palsa	KTVKAEQVKAGDTVRTQAGNEVIVSRIDSSFMGMPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0311372_115865852	3300030520	Palsa	MSDTWKSVKADAVRAGDTVRIQSGQVFLVSRLENPFLGLPTMLAFIEDTPDRWFKQPMLVDADVEV
Ga0311356_110177102	3300030617	Palsa	MADTWKTVKAEQVKAGDTVRTQAGNEVIVSRIDNSFMGMPNMLAFIEDTPDRWFKQPMTADADVEVRAS
Ga0311354_113174001	3300030618	Palsa	MSETWTSVKADAVRAGDAVRIQSGQVFLVSRIENPFLGLPTMLAFIEDTPERWFKQPMLVDADVEVRAK
Ga0302308_101065392	3300031027	Palsa	LTIPPAESPGSQRSNARTMSETWKTVKASDVRVGDAVRTRTGDVVTVSRIESAFFGRPGMLAFIEDTPDRWFKQPMPDDADVEVRSGS
Ga0302180_102998822	3300031028	Palsa	MSDTWKTVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0302325_102990522	3300031234	Palsa	MSDTWKTVKAEKVKAGDAVRTQSGDVVTVSRIEKSFMGLPNMLAFIEDTADRWFKQPMMADADVEVRSS
Ga0302325_103461982	3300031234	Palsa	VAASDVKVGDVVRTSTGDVIVVSRIETSFLGRPNMLAFIEDTPDRWYKRPTMVDAEVEVRSSTTK
Ga0302325_106081522	3300031234	Palsa	MSDTWKTVKASDVRIGDAVRTRTGEVITVSRIEAAFFGRPDMLAFIEDTPDRWFKQPMPGDSDVEVRSGA
Ga0302325_113438162	3300031234	Palsa	MAESWKKVKAESVRAGDAVRTQSGEVVTVSRIEKSFLGLPNMLAFIEDTPDRWFKQPIMADADVEVRSS
Ga0302325_121617282	3300031234	Palsa	MADTWNTVKAEQVKAGDAVRTQSGEVLTVSRIEQAFMGLPNMLAFIEDTPDRWFKQPMMGDAEVEVRTS
Ga0302325_134121232	3300031234	Palsa	MSDEWKTAKADEVRVGDTVRTQTGSIVTVSRIESSFMGRPNMLAFIEDTADRWFKQPVTTDAEVEVRT
Ga0302324_1010384631	3300031236	Palsa	MSDTWKTVKAEKVQTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMAHAEVEV
Ga0302324_1018596291	3300031236	Palsa	GSFTMSDTWKTVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0302324_1025556912	3300031236	Palsa	VPETWKTVKAEEVATGDAVRTKAGDVVRVSRIETSFFGRPEMLAFIEDTSERWYKYPIAIGTDVEVRASTGP
Ga0302324_1032032212	3300031236	Palsa	MSDTWKTVKAEQVKAGDSVRTQSGEVVTVSRIEKSFMGLPTMLAFIEDTADRWFKQPMMADAD
Ga0302326_103760742	3300031525	Palsa	RAIEWRRDPFAMSENWKTVKAEAVRPGDAVRTQSGDVVTVSRVEKAFLGLPNMLAFIEDTPDRWFKQPMMADADVEVRSS
Ga0307374_1000518513	3300031670	Soil	MSESWKKVKADEVRAGDAVRTQAGSVVTVSRIESSFLGMPNMLAFIEDTPERWFKQPMMADAEVEVRS
Ga0310686_1002563124	3300031708	Soil	MPDTWKTVKALEVKPGDTVRTQSGEVLIVSRVEAPFFGRSNMVAFIEDTPDRWFKQPMQSDSDVEIRATTA
Ga0310686_1046250021	3300031708	Soil	TWKTVKAEKVKTGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0310686_1064851791	3300031708	Soil	MADTWKTVKAEQVKAGETVRTQSGSVVIVSRVETSFMGMPNMLAFIEDTPDRWFKQPMTADADVEVRSS
Ga0310686_1111668582	3300031708	Soil	MSESWKTVKAQEVQVGDTVRAPSGTVVIVSRIESPFFGMSNMVAFIEDTPDRWFKQPVPSDSDVEISTATA
Ga0310686_1130085782	3300031708	Soil	MSDTWKTVKAHDVKAGDTVRTQSGTVVIVSRIEAPFLGLANMVAFIEDTPDRWFKQPVVSDSEVEISAASS
Ga0310686_1160045481	3300031708	Soil	MSDTWKTVKADEVKAGDAVRTQSGDVVTVSRIEKSFMGMPNMLAFIEDTADRWFKQPMMAEADVEVRTS
Ga0311301_115281272	3300032160	Peatlands Soil	MSETWKKVKANEVRAGDTVRTQSGSVVLVSRIETGFMGRPEMFAFIEDTPDRWFKQPMMADAEVEVRS
Ga0370483_0085843_210_419	3300034124	Untreated Peat Soil	MSDTWKTVKAEKVKSGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADAEVEVLSS
Ga0370492_0165400_242_451	3300034282	Untreated Peat Soil	MSDTWKTVTAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVLSS
Ga0370492_0292522_3_203	3300034282	Untreated Peat Soil	MSDTWNTVKAEKVKAGDSVRTQSGDVVIVSRIEQSFMGLPNMLAFIEDTPDRWFKQPMMADTEVEVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083562

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences