Metagenome / Metatranscriptome Family F083552

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	69 residues
Representative Sequence	RKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Number of Associated Samples	70
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.09 %
% of genes near scaffold ends (potentially truncated)	82.14 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.714 % of family members)
Environment Ontology (ENVO)	Unclassified (62.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.750 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.39% β-sheet: 32.65% Coil/Unstructured: 47.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00069	Pkinase	3.57
PF07676	PD40	3.57
PF07238	PilZ	2.68
PF00990	GGDEF	1.79
PF04679	DNA_ligase_A_C	1.79
PF01872	RibD_C	1.79
PF10604	Polyketide_cyc2	1.79
PF01370	Epimerase	1.79
PF13517	FG-GAP_3	0.89
PF09587	PGA_cap	0.89
PF08031	BBE	0.89
PF08534	Redoxin	0.89
PF04216	FdhE	0.89
PF05985	EutC	0.89
PF14534	DUF4440	0.89
PF02738	MoCoBD_1	0.89
PF13290	CHB_HEX_C_1	0.89
PF05960	DUF885	0.89
PF08447	PAS_3	0.89
PF02371	Transposase_20	0.89
PF05199	GMC_oxred_C	0.89
PF04986	Y2_Tnp	0.89
PF00665	rve	0.89
PF13701	DDE_Tnp_1_4	0.89
PF00194	Carb_anhydrase	0.89
PF03572	Peptidase_S41	0.89
PF01738	DLH	0.89
PF03705	CheR_N	0.89
PF14417	MEDS	0.89
PF00078	RVT_1	0.89
PF00175	NAD_binding_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	14.29
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.79
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.79
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.79
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.79
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.89
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.89
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.89
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	0.89
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.89
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.89
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.89
COG3058	Formate dehydrogenase maturation protein FdhE	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.89
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.89
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.57 %
Unclassified	root	N/A	46.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.57 %
Unclassified	root	N/A	46.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.57 %
Unclassified	root	N/A	46.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.04 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.79 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.89 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.89 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.68 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.89 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.89 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.89 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.04 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.89 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.89 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	0.89 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.89 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.89 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.04 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.89 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.89 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.89 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.89 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.89 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.04 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	0.89 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.89 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.89 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.89 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.89 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004267\|Ga0066396_10028747	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300004267\|Ga0066396_10040345	Not Available	716	Open in IMG/M
3300004633\|Ga0066395_10128933	All Organisms → cellular organisms → Bacteria → Acidobacteria	1258	Open in IMG/M
3300005332\|Ga0066388_101694126	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300005764\|Ga0066903_103260157	Not Available	877	Open in IMG/M
3300009792\|Ga0126374_10070661	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1866	Open in IMG/M
3300010043\|Ga0126380_11304048	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300010046\|Ga0126384_10479672	Not Available	1068	Open in IMG/M
3300010048\|Ga0126373_10345894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300010048\|Ga0126373_11031849	Not Available	888	Open in IMG/M
3300010048\|Ga0126373_12484600	Not Available	577	Open in IMG/M
3300010359\|Ga0126376_10111567	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300010360\|Ga0126372_10127735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1980	Open in IMG/M
3300010360\|Ga0126372_10155112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1837	Open in IMG/M
3300010360\|Ga0126372_10195852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1676	Open in IMG/M
3300010361\|Ga0126378_10040676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	4258	Open in IMG/M
3300010366\|Ga0126379_10398389	All Organisms → cellular organisms → Bacteria → Acidobacteria	1423	Open in IMG/M
3300010376\|Ga0126381_100424148	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300010376\|Ga0126381_101423928	All Organisms → cellular organisms → Bacteria → Acidobacteria	1002	Open in IMG/M
3300010376\|Ga0126381_101994826	Not Available	836	Open in IMG/M
3300010376\|Ga0126381_104786283	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300010398\|Ga0126383_11264271	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300016270\|Ga0182036_11735183	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300016294\|Ga0182041_11646837	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300016294\|Ga0182041_12095343	Not Available	528	Open in IMG/M
3300016319\|Ga0182033_11843145	Not Available	549	Open in IMG/M
3300016341\|Ga0182035_10069783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2467	Open in IMG/M
3300016341\|Ga0182035_10260487	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300016341\|Ga0182035_10715824	Not Available	873	Open in IMG/M
3300016371\|Ga0182034_10971434	Not Available	733	Open in IMG/M
3300016371\|Ga0182034_11460467	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300016404\|Ga0182037_10129507	Not Available	1870	Open in IMG/M
3300016404\|Ga0182037_11960270	Not Available	525	Open in IMG/M
3300016445\|Ga0182038_10979378	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300016445\|Ga0182038_11105231	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300020579\|Ga0210407_10000030	All Organisms → cellular organisms → Bacteria	209274	Open in IMG/M
3300020580\|Ga0210403_10006625	All Organisms → cellular organisms → Bacteria → Acidobacteria	9683	Open in IMG/M
3300021168\|Ga0210406_10333726	All Organisms → cellular organisms → Bacteria → Acidobacteria	1226	Open in IMG/M
3300021180\|Ga0210396_10708484	Not Available	869	Open in IMG/M
3300021401\|Ga0210393_11041930	Not Available	661	Open in IMG/M
3300021478\|Ga0210402_10229031	All Organisms → cellular organisms → Bacteria → Acidobacteria	1713	Open in IMG/M
3300021478\|Ga0210402_11432493	Not Available	618	Open in IMG/M
3300021560\|Ga0126371_12509371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300022726\|Ga0242654_10342482	Not Available	560	Open in IMG/M
3300025905\|Ga0207685_10256383	Not Available	848	Open in IMG/M
3300027039\|Ga0207855_1011479	Not Available	1252	Open in IMG/M
3300027049\|Ga0207806_1036800	Not Available	560	Open in IMG/M
3300027330\|Ga0207777_1024176	Not Available	1148	Open in IMG/M
3300027502\|Ga0209622_1021290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1134	Open in IMG/M
3300027516\|Ga0207761_1008872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2288	Open in IMG/M
3300031128\|Ga0170823_14138253	Not Available	1068	Open in IMG/M
3300031546\|Ga0318538_10391874	Not Available	751	Open in IMG/M
3300031546\|Ga0318538_10470180	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300031564\|Ga0318573_10328373	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300031573\|Ga0310915_10049623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2705	Open in IMG/M
3300031679\|Ga0318561_10060111	All Organisms → cellular organisms → Bacteria → Acidobacteria	1925	Open in IMG/M
3300031682\|Ga0318560_10728951	Not Available	536	Open in IMG/M
3300031719\|Ga0306917_10649519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	829	Open in IMG/M
3300031719\|Ga0306917_11209428	Not Available	586	Open in IMG/M
3300031744\|Ga0306918_10104320	Not Available	2024	Open in IMG/M
3300031744\|Ga0306918_10505382	Not Available	946	Open in IMG/M
3300031744\|Ga0306918_11316692	Not Available	555	Open in IMG/M
3300031768\|Ga0318509_10598559	Not Available	614	Open in IMG/M
3300031770\|Ga0318521_10521910	Not Available	715	Open in IMG/M
3300031771\|Ga0318546_10566708	Not Available	798	Open in IMG/M
3300031781\|Ga0318547_10612375	Not Available	675	Open in IMG/M
3300031819\|Ga0318568_11024827	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300031821\|Ga0318567_10092293	All Organisms → cellular organisms → Bacteria → Acidobacteria	1629	Open in IMG/M
3300031833\|Ga0310917_10128516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1656	Open in IMG/M
3300031833\|Ga0310917_10147622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1549	Open in IMG/M
3300031833\|Ga0310917_10609805	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300031833\|Ga0310917_10832361	Not Available	622	Open in IMG/M
3300031879\|Ga0306919_10673430	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300031879\|Ga0306919_10796711	Not Available	726	Open in IMG/M
3300031879\|Ga0306919_10860869	Not Available	695	Open in IMG/M
3300031879\|Ga0306919_11026136	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300031890\|Ga0306925_10082017	Not Available	3411	Open in IMG/M
3300031890\|Ga0306925_10214290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2077	Open in IMG/M
3300031890\|Ga0306925_10882272	Not Available	921	Open in IMG/M
3300031910\|Ga0306923_10035580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5402	Open in IMG/M
3300031910\|Ga0306923_11755223	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300031912\|Ga0306921_10244942	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300031941\|Ga0310912_10286445	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300031941\|Ga0310912_11426463	Not Available	522	Open in IMG/M
3300031942\|Ga0310916_10254486	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300031942\|Ga0310916_10480622	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300031942\|Ga0310916_10590028	Not Available	944	Open in IMG/M
3300031942\|Ga0310916_10944358	Not Available	721	Open in IMG/M
3300031942\|Ga0310916_11415014	Not Available	569	Open in IMG/M
3300031945\|Ga0310913_10354853	Not Available	1038	Open in IMG/M
3300031947\|Ga0310909_11113092	Not Available	641	Open in IMG/M
3300031954\|Ga0306926_10007064	All Organisms → cellular organisms → Bacteria → Proteobacteria	12152	Open in IMG/M
3300031954\|Ga0306926_10048302	All Organisms → cellular organisms → Bacteria	5079	Open in IMG/M
3300031954\|Ga0306926_10481868	Not Available	1526	Open in IMG/M
3300031954\|Ga0306926_10497601	All Organisms → cellular organisms → Bacteria → Acidobacteria	1498	Open in IMG/M
3300031954\|Ga0306926_11150882	Not Available	914	Open in IMG/M
3300032001\|Ga0306922_10074254	Not Available	3560	Open in IMG/M
3300032001\|Ga0306922_12355056	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300032035\|Ga0310911_10325293	Not Available	886	Open in IMG/M
3300032052\|Ga0318506_10324189	Not Available	683	Open in IMG/M
3300032059\|Ga0318533_10727652	Not Available	728	Open in IMG/M
3300032067\|Ga0318524_10057525	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300032076\|Ga0306924_10628801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300032076\|Ga0306924_10713546	Not Available	1125	Open in IMG/M
3300032205\|Ga0307472_102497783	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300032261\|Ga0306920_100611994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1611	Open in IMG/M
3300032261\|Ga0306920_102078234	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300032261\|Ga0306920_103591736	Not Available	571	Open in IMG/M
3300032782\|Ga0335082_10085379	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300033158\|Ga0335077_10198735	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.39%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066396_100287471	3300004267	Tropical Forest Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNR
Ga0066396_100403451	3300004267	Tropical Forest Soil	QIHFLVEEGQIRIKAIVRHVKDRAGMGLQVIAVAHEDRPRLAALLIRLRSLSQSRRNQPS
Ga0066395_101289332	3300004633	Tropical Forest Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD*
Ga0066388_1016941262	3300005332	Tropical Forest Soil	MFVETRRPQSVGSTAQIDFLVQEGQIRTKVVVRHIKTASGMGLEFTAVAHEDRPRLAALLTRLRGLAQSHNNLAH*
Ga0066903_1032601572	3300005764	Tropical Forest Soil	LGGMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLIRLRSLSQSRRNQPS*
Ga0126374_100706611	3300009792	Tropical Forest Soil	VLFVRFLVQEGQIRTKVVVRHIKTASGMGLEFTAVAHEDRPRLAALLTRLRGLAQSHNNLPH*
Ga0126380_113040481	3300010043	Tropical Forest Soil	MFVETRRPQSVGSTAQIDFLVQEGQIRTKVVVRHIKTASGMGLEFTAVAHEDRPRLAAL
Ga0126384_104796721	3300010046	Tropical Forest Soil	MFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD*
Ga0126373_100627205	3300010048	Tropical Forest Soil	LVEEGQIRIKAIVRHVKDSAGMGLQFIAVAHEDRSRLAALLIRLRSLSQSRRNQPS*
Ga0126373_103458942	3300010048	Tropical Forest Soil	LETRKPPSVGTNAQIDFLVEEGQIRTKAIVRHVKTAMGMGLEFTAIAQEDRPNLAALLTRLRGLSQARHDFRG*
Ga0126373_110318491	3300010048	Tropical Forest Soil	GATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFVAVAHEDRPRLAALLNRLRALSQSQHNAPD*
Ga0126373_124846001	3300010048	Tropical Forest Soil	FVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS*
Ga0126376_101115675	3300010359	Tropical Forest Soil	ATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD*
Ga0126372_101277351	3300010360	Tropical Forest Soil	RKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLIRLRSLSQSRRNQPS*
Ga0126372_101551123	3300010360	Tropical Forest Soil	MFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS*
Ga0126372_101958523	3300010360	Tropical Forest Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSRHNQPS*
Ga0126378_100406766	3300010361	Tropical Forest Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAAVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD*
Ga0126379_103983891	3300010366	Tropical Forest Soil	MFVETRRPQSVGSTAQIDFLVQEGQIRTKVVVRHIKTASGMGLEFTAVAHEDRPRLAALLTRLRGLAQSHNNLPH*
Ga0126381_1004241481	3300010376	Tropical Forest Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVTHEDRPRLAALLTRLRSLAQSRHNQPSQRAVR*
Ga0126381_1014239282	3300010376	Tropical Forest Soil	PVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS*
Ga0126381_1019948262	3300010376	Tropical Forest Soil	VMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLIRLRSLSQSRRNQPG*
Ga0126381_1047862832	3300010376	Tropical Forest Soil	ARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFVAVAHEDRPRLAALLNRLRALSQSQHNAPD*
Ga0126383_112642712	3300010398	Tropical Forest Soil	MFVETRKPQPVGVMAQIHFLVEEGQIRIRAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS*
Ga0182036_117351831	3300016270	Soil	PVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMRLEFIAVAHEDRPRLAALVTRLRSLSQSRHKQPS
Ga0182041_116468371	3300016294	Soil	KPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMRLEFIAVAHEDRPRLAALVTRLRSLSQSRHKQPS
Ga0182041_120953432	3300016294	Soil	RKPQPVGVMAQIHFLLEEGQIRIKAIVRHVKDRADMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0182033_118431451	3300016319	Soil	IHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0182035_100697831	3300016341	Soil	GMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0182035_102604871	3300016341	Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPSQRAVR
Ga0182035_107158241	3300016341	Soil	RKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNMPD
Ga0182034_109714342	3300016371	Soil	GGMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0182034_114604671	3300016371	Soil	SLGGMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPC
Ga0182037_101295071	3300016404	Soil	QPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0182037_119602701	3300016404	Soil	RKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0182038_109793782	3300016445	Soil	FVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPC
Ga0182038_111052311	3300016445	Soil	IHFLVEEGQIRIKGIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0210407_10000030170	3300020579	Soil	VGAKAEIDFLVEEGQIRTKAVVRHVEGASGMGLEFTAAAQEDRPRLGGLLTRLRSLSRPVERNNR
Ga0210403_100066259	3300020580	Soil	VTHKPQSVGAKAEIDFLVEDGQIRTKAVVRHVESASGMGLQFTGVAQEDRPHLGALLTRLRSLSRSRPNLPG
Ga0210406_103337263	3300021168	Soil	VKAEIDFLVEEGQIRTEAVVRHAEDARGMGLEFTGVAHEDRPHLGALLTRLRSLSRSRPNLSD
Ga0210396_107084842	3300021180	Soil	VGAKAEIDFLVEEGQIRTRAVVRHVEGASGMGLEFTGVAQEDRPHLGALLTRLRSFSRSRPDLPS
Ga0210393_110419301	3300021401	Soil	LSFGGIFVETHQPQPVGAKAQIDFLVEEGQIRTKAVVRHVEGASGMGLEFSGVAQEDGPRLGALLTRLRLPVIRRPR
Ga0210402_102290313	3300021478	Soil	FVETHQPQPVGAKAQIDFLVEEGQIRTKAVVRHVEGASGMGLEFSGVAQEDGPRLGALLTRLRLPVIRRPR
Ga0210402_114324931	3300021478	Soil	FVETHQPQSVGSKAQIDFLVEEGQIRTKAVVRHVEGASGMGLEFSGVAQEDRPRLGALLTRLRGFVSVQPA
Ga0126371_125093712	3300021560	Tropical Forest Soil	VMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPSQRAVR
Ga0242654_103424821	3300022726	Soil	PQPVGAKAEIDFLVEEGQIRTKAVVRHVEGASGMGLEFTAAAQEDRPRLGGLLTRLGSLSRPVERNNR
Ga0207685_102563833	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	THQPQPAGAKAQIDFLVEEGQIRTKAVVRHVEGASGMGLEFSGVAQEDGPRLVAWLTRLRLPVIRRPR
Ga0207855_10114792	3300027039	Tropical Forest Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFLAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0207806_10368001	3300027049	Tropical Forest Soil	PVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0207777_10241762	3300027330	Tropical Forest Soil	QIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0209622_10212903	3300027502	Forest Soil	AKAEIDFLVEDGQIRTKAVVRHVESASGMGLQFTGVAQEDRPHLGALLTRLRSLSRYRPNLHG
Ga0207761_10088721	3300027516	Tropical Forest Soil	VGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFLAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0170823_141382531	3300031128	Forest Soil	QIDFLVEEGQIRTKAVVRHVEGASGIGLEFTAIAQEDRPRLGTLLTRLRSLSPRLERNNG
Ga0318538_103918741	3300031546	Soil	VGVRAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0318538_104701801	3300031546	Soil	PQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0318573_103283731	3300031564	Soil	MHGVFVETRKPQPIGATAHIDFLVEEGQIRTKAVVRHIKTAAGMGLEFTAVVHEDRPRLAALMTRLRSLSQSQHNQP
Ga0310915_100496231	3300031573	Soil	MFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0318561_100601112	3300031679	Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVEAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0318560_107289511	3300031682	Soil	IHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0306917_106495191	3300031719	Soil	MAQIHFLVEEGQIRIRAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0306917_112094282	3300031719	Soil	FVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0306918_101043201	3300031744	Soil	VEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVEAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0306918_105053823	3300031744	Soil	VETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0306918_113166921	3300031744	Soil	RKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0318509_105985591	3300031768	Soil	FVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0318521_105219101	3300031770	Soil	PQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0318546_105667081	3300031771	Soil	VETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0318547_106123752	3300031781	Soil	PQPVGATAQIDFLVDEGQIRTKAVVRHVEAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0318568_110248271	3300031819	Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALL
Ga0318567_100922932	3300031821	Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAPTGMRLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0310917_101285161	3300031833	Soil	HFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0310917_101476221	3300031833	Soil	AQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQP
Ga0310917_106098051	3300031833	Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0310917_108323611	3300031833	Soil	HFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLIRLRSLSQSRRNQPS
Ga0306919_106734301	3300031879	Soil	GATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALTQSQHNAPD
Ga0306919_107967111	3300031879	Soil	GGMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0306919_108608692	3300031879	Soil	HFLVEEGQIRIRAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0306919_110261362	3300031879	Soil	PQPVGVMAQIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPC
Ga0306925_100820173	3300031890	Soil	QIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPC
Ga0306925_102142905	3300031890	Soil	FLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0306925_108822721	3300031890	Soil	MFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0306923_100355801	3300031910	Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0306923_117552231	3300031910	Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLR
Ga0306921_102449424	3300031912	Soil	ARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALTQSQHNAPD
Ga0310912_102864451	3300031941	Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHKQSS
Ga0310912_114264631	3300031941	Soil	AQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAP
Ga0310916_102544863	3300031942	Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNMPD
Ga0310916_104806221	3300031942	Soil	AQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPSQRAVR
Ga0310916_105900283	3300031942	Soil	ETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0310916_109443581	3300031942	Soil	GMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0310916_114150141	3300031942	Soil	FLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0310913_103548533	3300031945	Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFLAVDHEDRPRLAALLTRMRSLSQSRHNQPI
Ga0310909_111130922	3300031947	Soil	LGGMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0306926_100070644	3300031954	Soil	MFVEARKPQPVGATAQIDFLVDEGQIRTKAVVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALTQSQHNAPD
Ga0306926_100483021	3300031954	Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRRDQPS
Ga0306926_104818682	3300031954	Soil	LGGMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAAAHEDRPRLAALLKRLRALSQSQHNAPN
Ga0306926_104976011	3300031954	Soil	ETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPC
Ga0306926_111508822	3300031954	Soil	KPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0306922_100742541	3300032001	Soil	GMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVMAATGMGLEFIAVAHEDRPRLAALLTRLRSLSQSRHNQPC
Ga0306922_123550561	3300032001	Soil	RKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMRLEFIAVAHEDRPRLAALVTRLRSLSQSRHKQPS
Ga0310911_103252931	3300032035	Soil	KPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0318506_103241891	3300032052	Soil	FVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0318533_107276521	3300032059	Soil	TRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHKQPS
Ga0318524_100575253	3300032067	Soil	MFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKAATGMGLEFIAVAHEDRPRLAALLNRLRALSQSQHNAPD
Ga0306924_106288012	3300032076	Soil	RKPQPVGVMAQIHFLLEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0306924_107135463	3300032076	Soil	QPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFLAVDHEDRPRLAALLTRMRSLSQSRHNQPI
Ga0307472_1024977831	3300032205	Hardwood Forest Soil	AKAEIDFLVEEGQIRTKAVVRHVEGARGMGLEFTGVAQEDRPHLGALLTRLRSLSRSRPNMPD
Ga0306920_1006119941	3300032261	Soil	FGGIFVSTHEPQSVGTRAQIDFLVDEGQIRTNAIVCHVESAKGMGLKFTAIAQEDRPRLAALVARLRSLFRSRT
Ga0306920_1020782342	3300032261	Soil	GGMFVETRKPQPVGVMAQIHFLVEEGQIRIKAIVRHVKDSAGMGLQFIAAAHEDRPRLAALLKRLRALSQSQHNAPN
Ga0306920_1035917362	3300032261	Soil	GVMAQIHFLVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLTRLRSLSQSRHNQPS
Ga0335082_100853791	3300032782	Soil	GMFLETRNPQSVGSTAQIDFLVQEGQIRTKAVVRHIKNASGMGLQFTAVAQEDRPRLAALLTRLRASAQSHHNPPH
Ga0335077_101987351	3300033158	Soil	IFVETHEPQSVGAEAQIDFLVEEGQIKTKAVVRHLKGARGMGLEFTAIAQEDRPHLGALLARLRGLSRSRPNWSTG
Ga0310914_108681322	3300033289	Soil	LVEEGQIRIKAIVRHVKDRAGMGLQFIAVAHEDRPRLAALLIRLRSLSQSRRNQPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences