Metagenome / Metatranscriptome Family F083546

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083546
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	90 residues
Representative Sequence	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Number of Associated Samples	74
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	40.18 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (49.107 % of family members)
Environment Ontology (ENVO)	Unclassified (58.929 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.31% β-sheet: 29.75% Coil/Unstructured: 47.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.11: PA3566-like	d1y0ha_	1y0h	0.70195
d.58.4.0: automated matches	d2bbea_	2bbe	0.69881
d.58.4.11: PA3566-like	d1x7va1	1x7v	0.67575
d.58.4.0: automated matches	d3qmqa1	3qmq	0.67509
d.58.4.0: automated matches	d4dpoa1	4dpo	0.67115

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00440	TetR_N	22.32
PF16925	TetR_C_13	17.86
PF01965	DJ-1_PfpI	9.82
PF04993	TfoX_N	4.46
PF00903	Glyoxalase	1.79
PF06210	DUF1003	0.89
PF03928	HbpS-like	0.89
PF08327	AHSA1	0.89
PF08546	ApbA_C	0.89
PF01527	HTH_Tnp_1	0.89
PF12840	HTH_20	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	4.46
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.89
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.11 %
Unclassified	root	N/A	25.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.11 %
Unclassified	root	N/A	25.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.11 %
Unclassified	root	N/A	25.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.39 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.68 %
Nocardioides sp. SYSU D00514	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. SYSU D00514	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10462612	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005179\|Ga0066684_10160269	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300005332\|Ga0066388_101110613	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300005332\|Ga0066388_106596127	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005363\|Ga0008090_15047730	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005764\|Ga0066903_101745563	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300005764\|Ga0066903_102075674	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005764\|Ga0066903_108847683	Not Available	511	Open in IMG/M
3300006028\|Ga0070717_11009075	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300009792\|Ga0126374_10785428	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300010046\|Ga0126384_11329013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	668	Open in IMG/M
3300010048\|Ga0126373_10013792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6639	Open in IMG/M
3300010048\|Ga0126373_10020590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5572	Open in IMG/M
3300010048\|Ga0126373_10134640	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300010048\|Ga0126373_10204069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. SYSU D00514	1918	Open in IMG/M
3300010048\|Ga0126373_10261441	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300010048\|Ga0126373_12503025	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300010358\|Ga0126370_10060073	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300010358\|Ga0126370_10096325	Not Available	2034	Open in IMG/M
3300010358\|Ga0126370_10516737	Not Available	1012	Open in IMG/M
3300010359\|Ga0126376_10435755	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300010360\|Ga0126372_11400423	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300010360\|Ga0126372_13029339	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010361\|Ga0126378_10391969	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300010361\|Ga0126378_10468200	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300010361\|Ga0126378_12612720	Not Available	577	Open in IMG/M
3300010361\|Ga0126378_13196298	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010362\|Ga0126377_13147560	Not Available	533	Open in IMG/M
3300010366\|Ga0126379_10434376	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300010366\|Ga0126379_10738477	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300010366\|Ga0126379_10835982	Not Available	1021	Open in IMG/M
3300010366\|Ga0126379_11581240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300010376\|Ga0126381_101130596	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300010376\|Ga0126381_102911957	Not Available	681	Open in IMG/M
3300010376\|Ga0126381_103080636	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300010398\|Ga0126383_12745642	Not Available	575	Open in IMG/M
3300012971\|Ga0126369_11967740	Not Available	673	Open in IMG/M
3300012971\|Ga0126369_12004599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300016270\|Ga0182036_11037245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300016357\|Ga0182032_10258200	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300016371\|Ga0182034_10438892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079	Open in IMG/M
3300016371\|Ga0182034_10872027	Not Available	773	Open in IMG/M
3300016445\|Ga0182038_10830874	Not Available	811	Open in IMG/M
3300016445\|Ga0182038_11525878	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300018468\|Ga0066662_11957346	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300021374\|Ga0213881_10251818	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300021560\|Ga0126371_10015717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6923	Open in IMG/M
3300021560\|Ga0126371_10158581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2331	Open in IMG/M
3300021560\|Ga0126371_10784571	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300021560\|Ga0126371_11046019	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300021560\|Ga0126371_11351136	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300027874\|Ga0209465_10292690	Not Available	816	Open in IMG/M
3300031543\|Ga0318516_10178447	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300031544\|Ga0318534_10063402	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300031544\|Ga0318534_10391443	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300031545\|Ga0318541_10131446	Not Available	1365	Open in IMG/M
3300031546\|Ga0318538_10078382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1674	Open in IMG/M
3300031546\|Ga0318538_10383646	Not Available	760	Open in IMG/M
3300031546\|Ga0318538_10761823	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031564\|Ga0318573_10028243	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300031564\|Ga0318573_10037429	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300031564\|Ga0318573_10410514	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031572\|Ga0318515_10436198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	701	Open in IMG/M
3300031573\|Ga0310915_10462207	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300031668\|Ga0318542_10042257	Not Available	2031	Open in IMG/M
3300031668\|Ga0318542_10531599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300031679\|Ga0318561_10133687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300031679\|Ga0318561_10149564	Not Available	1253	Open in IMG/M
3300031680\|Ga0318574_10477520	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031681\|Ga0318572_10514635	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300031681\|Ga0318572_10717654	Not Available	595	Open in IMG/M
3300031682\|Ga0318560_10403003	Not Available	740	Open in IMG/M
3300031682\|Ga0318560_10564032	Not Available	617	Open in IMG/M
3300031713\|Ga0318496_10344077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300031723\|Ga0318493_10840407	Not Available	518	Open in IMG/M
3300031736\|Ga0318501_10557097	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031751\|Ga0318494_10871193	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031764\|Ga0318535_10258401	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031778\|Ga0318498_10436179	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031779\|Ga0318566_10205419	Not Available	978	Open in IMG/M
3300031793\|Ga0318548_10627453	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031796\|Ga0318576_10560101	Not Available	539	Open in IMG/M
3300031821\|Ga0318567_10473626	Not Available	711	Open in IMG/M
3300031833\|Ga0310917_10172786	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300031846\|Ga0318512_10156108	Not Available	1103	Open in IMG/M
3300031860\|Ga0318495_10212348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300031890\|Ga0306925_10555291	Not Available	1217	Open in IMG/M
3300031893\|Ga0318536_10081029	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300031893\|Ga0318536_10635598	Not Available	533	Open in IMG/M
3300031894\|Ga0318522_10276758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300031896\|Ga0318551_10082978	Not Available	1681	Open in IMG/M
3300031897\|Ga0318520_10661856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	651	Open in IMG/M
3300031910\|Ga0306923_10380571	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300031941\|Ga0310912_10164422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300031942\|Ga0310916_11302452	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031945\|Ga0310913_10089842	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300031947\|Ga0310909_11308680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300031954\|Ga0306926_10433007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1621	Open in IMG/M
3300031954\|Ga0306926_11605112	Not Available	746	Open in IMG/M
3300031959\|Ga0318530_10066439	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300032009\|Ga0318563_10652696	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300032041\|Ga0318549_10054048	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300032043\|Ga0318556_10176023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300032043\|Ga0318556_10204610	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300032044\|Ga0318558_10305821	Not Available	786	Open in IMG/M
3300032054\|Ga0318570_10222975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300032055\|Ga0318575_10419011	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300032063\|Ga0318504_10062374	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300032064\|Ga0318510_10514247	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032076\|Ga0306924_10149971	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300032089\|Ga0318525_10504719	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300032090\|Ga0318518_10106827	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.11%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.96%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	49.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	30.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_104626122	3300004633	Tropical Forest Soil	EWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADNGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPQPTRVAAFETSIFQSR*
Ga0066684_101602692	3300005179	Soil	MAFCTVLEWDSAFPFDRYQQMNDRAQGHSALPEGCLSRIVGSPDGGAAVIEVWRSADDARRFSEQYAHLLVDFAMPSPTRVAAFETTIFQAR*
Ga0066388_1011106131	3300005332	Tropical Forest Soil	MAFCTLLQWDSAFPFDRYEEMNQRAQGHEALPAGCLSRIVGGADGTATIIEVWRSGDDARRFSEQHAPLLAEFAMPPPTRVAAFETTIFQTR*
Ga0066388_1065961271	3300005332	Tropical Forest Soil	MAFCTLLEWDGGLPFDRYREMNDRTDSHADLPEGCLSRIVGRPDGGAAIIEIWRSADDARRFSERNAHLLAEFAMSAPTRVSAFETAIFQTR*
Ga0008090_150477302	3300005363	Tropical Rainforest Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRPGGDGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR*
Ga0066903_1017455632	3300005764	Tropical Forest Soil	MAFCTLLQWDSAFPYDRYEELNKRAQGHATLPEGCLARIVGGTDGAATIIEVWQSGDDARRFSEQNTPLLAEFDMPSPIRVTAFETTIFETH*
Ga0066903_1020756742	3300005764	Tropical Forest Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGGAGGGATIIEVWRSSGDAQRFSEHNAHLLAEFDMPPPARVAAFETSIFQSR*
Ga0066903_1088476832	3300005764	Tropical Forest Soil	MAFCTMLQWDSAFPFDRYEEMNKRAQGHETLPEGCLSRIVGGTDGTATIIEVWRSDDDARRFSEQHAPLLAEFAMPPPTRVAAFET
Ga0070717_110090752	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAFCTVLEFDSAFPFDRYQQMNDRAQGHAALPEGCLSRIVGRPEGGAAVIEVWRSADDARRFSEQNAHLLAEFAMPSPTRVAAFETTTFQAR*
Ga0126374_107854282	3300009792	Tropical Forest Soil	MAFCTMLQWDSAFPFDRYEEMNKRAQGHETLPEGCLSRIVGGTDGTATIIEVWRSGDDARRFSEQHAPLLAEFAMPPPTRVAAFETSIFQTR*
Ga0126384_113290131	3300010046	Tropical Forest Soil	MAFCTLLEWDSAFPFDRYLEMNQRAQGHAALPDGCLSRIVGGADGAATIIEVWRSGDDARRFSDQHAPLLAEFGMPSP
Ga0126373_100137926	3300010048	Tropical Forest Soil	LLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPQPTRVAAFETSIFQSR*
Ga0126373_100205906	3300010048	Tropical Forest Soil	MAYCTLLEFDSAFPFDRYQELNDRADGHATLPDGCLSRVVGRPDGGAMIIEVWRSADDAHCFSEKNTHLLAEFGMPAPTRVAAFDTAIFQTG*
Ga0126373_101346403	3300010048	Tropical Forest Soil	MAFCTLLQWDSAFPYDRYEELNKRAQGHVTLPEGCLARIVGGTDGAATIIEVWQSGDDARRFSEQNTPLLAEFDMPSPIRVTAFETTIFETH*
Ga0126373_102040693	3300010048	Tropical Forest Soil	MAFCTLLEWDSAFPFDRYQQMNNRAGSHAELPEGCLSRIVGHPDGDRAAIIEVWRSSADAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR*
Ga0126373_102614413	3300010048	Tropical Forest Soil	MAFCTLLEWDGGFPFDRYQEMNDRTDSHADLPEGCLSRIVGRPDGGAAVIEIWRSADDARRFSERNAHLLAEFGMPAPTRVSAFETAIFQTR*
Ga0126373_125030251	3300010048	Tropical Forest Soil	MLGTRPLTMERPAMAFCTLLEWESAFPFDRYQQMNDRAESHAGLPEGCLSRIVGRPDGDGATIIEVWRSSDDAQRFSEHNAHLLAEFGMPPPTRVAAFQTSIFQTG*
Ga0126370_100600733	3300010358	Tropical Forest Soil	MAFCTLLEWESAFPFDRYQQINDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPQPTRVAAFETSIFQSR*
Ga0126370_100963253	3300010358	Tropical Forest Soil	MAFCTLLQWDSAFPFDRYEEMNQRAQGHEALPAGCLSRIVGGADGTATIIEVWRSGDDARRFSEQHAPLLAEFAMP
Ga0126370_105167372	3300010358	Tropical Forest Soil	MTFCTVLEWDSAFPFDRYDEMNQRAQGHETLPEGCLTRIVGGADGAATIIEVWRTGDDARRFSDQHSHLLAEFAMPAPTRAAAFQTTIFQTR*
Ga0126376_104357552	3300010359	Tropical Forest Soil	MAFCTLLEFDGGFPFDRYQEMNDRTDSHADLPEGCLSRIVGRPDGGAAIIEIWRSADDARRFSERNAHLLAEFAMPAPTRVSAFETAIFQTR*
Ga0126372_114004232	3300010360	Tropical Forest Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPQPTRVAAFETSIFQSR*
Ga0126372_130293392	3300010360	Tropical Forest Soil	SAFPFDRYEEMNQRAQGHEALPAGCLSRIVGGADGTATIIEVWRSGDDARRFSEQHAPLLAEFAMPPPTRVAAFETTIFQTR*
Ga0126378_103919693	3300010361	Tropical Forest Soil	MAFCTLLEWDGAFPFDRYQEMNDRTDSHADLPEGCLSRIVGRPDGGAAIIEIWRSADDAARFGERNAHLLAEFAMPAPTRVSAFETAIFQTR*
Ga0126378_104682002	3300010361	Tropical Forest Soil	MAFCTLLEWENAFPFDRYQQMNDRTESHAGLPEGCLSRIVGGADTGGATIIEVWRSSGDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR*
Ga0126378_126127202	3300010361	Tropical Forest Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHGGLPEGCLSRIVGRADGDGATIIEVWRSSDDAQRFSEQNAHLLAEFGMPPPTRVAAFQTSIFQTG*
Ga0126378_131962982	3300010361	Tropical Forest Soil	GCADDSVVLGPGERAAEWESAFPFDRYQQMTDRTDSHAGLPEGCLSRIVGRPGGDGAAIIEVWRSGGDAQRFSEDNAHLLAEFGMPPPTRVAAFETSIFQSR*
Ga0126377_131475602	3300010362	Tropical Forest Soil	MLVARPLTTGRPAMAFCTLLEWENAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPPTRVAA
Ga0126379_104343763	3300010366	Tropical Forest Soil	MAFCTLLQWDSAFPFDRYEEMNQRAQGHEALPAGCLSRIVGGADGTATIIEVWRSGDDARRFSEQHAPLLAEFAMPPPTRVAAFETSIFQTR*
Ga0126379_107384772	3300010366	Tropical Forest Soil	MAFCTLLEWESAFPFDRYQQMNDRADSHAGLPEGCLSRIVGRPGGDGAAIIEVWRSSSDAQAFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR*
Ga0126379_108359822	3300010366	Tropical Forest Soil	MAFCTLLQWDGAFPYDRYEALNKRAQGHATLPEGCLARIVGGTDGAETIVEVWQSGDDARRFS
Ga0126379_115812401	3300010366	Tropical Forest Soil	MAFCTLLEWDGGFPFDRYQEMNDRTDSHADLPEGCLTRVAGRPDGGAAIIEIWRSADDARRFSERNAHLLAEFGMPPPTRVSAFETAIFQTR*
Ga0126381_1011305962	3300010376	Tropical Forest Soil	MAFCTLLEWDGGFPFDRYQEMNDRTDSHADLPEGCLSRIVGRPDGGAAIIEIWRSADDAARFGERNAHLLAEFAMPAPTRVSAFETAIFQTR*
Ga0126381_1029119572	3300010376	Tropical Forest Soil	MAYCTLLEFDSAFPFDRYQELNDRADGHATLPDGCLSRVVGRPDGGAMIIEVWRSADDARRFSEKNTHLLAEFGMPAPTRVAAF
Ga0126381_1030806361	3300010376	Tropical Forest Soil	TLLEWENAFPFDRYQQMNDRTESHAGLPEGCLSRIVGGADTGGATIIEVWRSSGDAQRFSEQNAHLLAEFGMPPPTRVAAFETSVFQSR*
Ga0126383_127456422	3300010398	Tropical Forest Soil	MAFCTLLEWENAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQAFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR*
Ga0126369_119677402	3300012971	Tropical Forest Soil	MAFCTLLEWESAFPFDRYQQMNDRTGSHAGLPEGCLSRIVGRPDGGGATIIEVWRSGGDAQRFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR*
Ga0126369_120045992	3300012971	Tropical Forest Soil	MAFCTLLEWDSAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADSGGAAIIEVWRSSGDAQRFSEQHAHLLAEFAMPSPTRVAAFETSIFQSR*
Ga0182036_110372452	3300016270	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADGDGATIIEVWRSSGDAQRFSDHNAHLLAEFGMPPPTRVAAFETNIFQSR
Ga0182032_102582002	3300016357	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHARLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0182034_104388923	3300016371	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGRATIIEVWRSSGDAQRFSEDNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0182034_108720271	3300016371	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSI
Ga0182038_108308742	3300016445	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPESCLSRIVGRGDGDGATIIEVWRSSDDAQRFSEQNAHLLAEFGMPPPTRVAAFKTSIFQTG
Ga0182038_115258782	3300016445	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFAMPAPTRVAAFETSIFQTA
Ga0066662_119573462	3300018468	Grasslands Soil	MAFCTLLQWDGDFPLERYREMNERAEGHGTTLPDGCLARIVGPVDTGAAIIEVWRSGDDARRFSEQSAALLGEFSMPAPTRVAAFETTIFQARESA
Ga0213881_102518182	3300021374	Exposed Rock	MAFCTLLEWDEAFPFDRYRQMNDQAQGHTALPEGCLSRIAGRAGSGAAIIEIWRSAEDARRFSEQHAHLLAEFAMPPPTRTTAFETAIYQIR
Ga0126371_100157174	3300021560	Tropical Forest Soil	MTFCTVLEWDSAFPFDRYDEMNQRAQGHETLPEGCLTRIVGGADGAATIIEVWRTGDDARRFSDQHSHLLAEFAMPAPTRAAAFQTTIFQTR
Ga0126371_101585811	3300021560	Tropical Forest Soil	MAFCTMLEWDSAFPFDRYEEMNQRAQGHAALPEGCLTRIVGGADGAATIIEVWRSGDDARRFSEEQAPLLAGFAMPSPARVAAFETTIFHTR
Ga0126371_107845712	3300021560	Tropical Forest Soil	MAFCTLLEWESAFPFDRYQQMNDRTGSHAGLPEGCLSRIVGRPDGGGATIIEVWRSGGDAQRFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0126371_110460193	3300021560	Tropical Forest Soil	FCTLLEWDGGFPFDRYQEMNDRTDSHADLPEGCLSRIVGRPDGGAAIIEIWRSADDARRFSERNAHLLAEFAMPAPTRVSAFETAIFQTR
Ga0126371_113511361	3300021560	Tropical Forest Soil	PFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPQPTRIAAFETSIFQSR
Ga0209465_102926901	3300027874	Tropical Forest Soil	MLRARPPTTERPAIAFCTLLEWESAFPFDRYQQMNDRTDSHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEF
Ga0318516_101784472	3300031543	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318534_100634023	3300031544	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318534_103914431	3300031544	Soil	YQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318541_101314462	3300031545	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLLAEFGMPPPTRVAAFETNIFQSR
Ga0318538_100783822	3300031546	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLIAEFGMPPPTRVAAFETSIFQSR
Ga0318538_103836461	3300031546	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPPTRVAAFE
Ga0318538_107618231	3300031546	Soil	FCTLLEWNNAFPFDRYQQMNDRTESHAGLPEGCLTRVVGRGDGDAATIIEVWRSSGDAQRFSEQNAHLLAEFAMPAPTRVAAFETSIFQTR
Ga0318573_100282434	3300031564	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSGDDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318573_100374294	3300031564	Soil	MAFCTLLEWESAFPFDRYQQMNDRTGSHAGLPEGCLSRIVGRADGDGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318573_104105143	3300031564	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPKGCLTRVVGRGDGDAATIIEVWRSGDDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQTA
Ga0318515_104361982	3300031572	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAA
Ga0310915_104622072	3300031573	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318542_100422573	3300031668	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPESCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318542_105315992	3300031668	Soil	YQQMNDRTGSHAGLPEGCLSRIVGRADGDGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318561_101336873	3300031679	Soil	MAFCTLLEWESSFPFDRYQAMNDRTESHAGLPEGCLSRIVGRADGDGATIIEVWRSSEDAQRFSEQNAHLLAEFAMPAPTRVAAFETGIFQTG
Ga0318561_101495643	3300031679	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLIAEFGMPP
Ga0318574_104775203	3300031680	Soil	AAMALCTLLEWESSFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADGDGATIIEVWRSSDDAQRFSEQSAHLLAEFAMPAPTRVAAFETSIFQTG
Ga0318572_105146352	3300031681	Soil	MAFCTLLEWNNAFPFDRYQQMNDRTESHAGLPEGCLTRVVGRGDGDAATIIEVWRSSGDAQRFSEQNAHLLAEFAMPAPTRVAAFETSIFQTR
Ga0318572_107176541	3300031681	Soil	MAFCTLLEWESSFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADGDGATIIEVWRSSDDAQRFSEQSAHLLAEFAMPAPTRVAAFETSIFQTG
Ga0318560_104030031	3300031682	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFAMPAPTRVAAFETSIFQTR
Ga0318560_105640322	3300031682	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLIAEFGMPPPTRVAA
Ga0318496_103440771	3300031713	Soil	MAFCTLREWESAFPFDRYQQMNDRTGSHAGLPEGCLSRIVGRADGDGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318493_108404071	3300031723	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLIAEFGMPPPTRVAAFETNIFQSR
Ga0318501_105570972	3300031736	Soil	EWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318494_108711932	3300031751	Soil	MAFCTLLEWESSFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADGDGATIVEVWRSSDDAQRFSEQNAHLLAEFAMPAPTRVAAFETSIFQTG
Ga0318535_102584011	3300031764	Soil	WESAFPLDRYQEMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318498_104361792	3300031778	Soil	CWLHSAKPKTRGAGADNREAAMAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318566_102054192	3300031779	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFE
Ga0318548_106274532	3300031793	Soil	FCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318576_105601011	3300031796	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVA
Ga0318567_104736262	3300031821	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0310917_101727862	3300031833	Soil	MAFCTLLEWNNAFPFDRYQQMNDRTESHAGLPEGCLTRVVGRGDGDAATIIEVWRSSGDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318512_101561082	3300031846	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLIAEFGMP
Ga0318495_102123482	3300031860	Soil	LLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGCGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0306925_105552912	3300031890	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPP
Ga0318536_100810292	3300031893	Soil	MAFCTLLEWERAFPFDRYQQMNDRTQSHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318536_106355981	3300031893	Soil	MPFCTLLEWDSAFPFDRDREMNDRAQGHAALPEGCLSRVVGRAGTGATIIEVWHSSDDARRFSEQHAHLLAEFEMPPPTRTAAFETSIFESR
Ga0318522_102767581	3300031894	Soil	FPLDRYQEMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318551_100829784	3300031896	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFG
Ga0318520_106618562	3300031897	Soil	MAFCTLLEWNNAFPFDRYQQMNDRTESHAGLPEGCLTRVVGRGDGDAATIIEVWRSSGDAQRFSEQNAHLLAEFGM
Ga0306923_103805712	3300031910	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0310912_101644223	3300031941	Soil	MAFCTLLEWERAFPFDRYQLMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0310916_113024521	3300031942	Soil	GADNREAAMAFCTLLEWERAFPFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0310913_100898423	3300031945	Soil	MAFCTLLEWERAFPFDRYQQMNDRTGSHAGLPEGCLSRIVGRADGDGATIIEVWRSSGDAQRFSEDNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0310909_113086802	3300031947	Soil	MAFCTLLEWESSFPFDRYQAMNDRTESHAGLPEGCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTR
Ga0306926_104330071	3300031954	Soil	PFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLIAEFGMPPPTRVAAFETSIFQSR
Ga0306926_116051122	3300031954	Soil	MAFCTLLEWESSFPFDRYQQMNDRTDSHAGLPEGCLSRIVGRADGDGATIIEVWRSSDDAQRFSEQSAHLLAEFAMPAPTRVAAFENGIFQSG
Ga0318530_100664393	3300031959	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLLAEFGMPPPTRVAAFETNIFQS
Ga0318563_106526962	3300032009	Soil	PFDRYQQMNDRTESHAGLPEGCLTRVVGRGDGDAATIIEVWRSSGDAQRFSEQNAHLLAEFAMPAPTRVAAFETSIFQTR
Ga0318549_100540482	3300032041	Soil	MAFCTLLEWESAFPLDRYQEMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318556_101760231	3300032043	Soil	LLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLIAEFGMPPPTRVAAFETSIFQSR
Ga0318556_102046102	3300032043	Soil	MAFCTLLEWERAFPFDRYQQMNDRTESHAGLPESCLSRIVGRGDGDGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318558_103058211	3300032044	Soil	MAFCTLLEWNNAFPFDRYQQMNDRTESHAGLPEGCLTRVVGRGDGDAATIIEVWRSSGDAQRFSEQNAHLLAEFAMPAPTRVAAFETSIFQTG
Ga0318570_102229751	3300032054	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEHNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318575_104190111	3300032055	Soil	MAFCTLLEWESSFPFDRYQAMNDRTESHAGLPEGCLSRIVGRADGDGATIIEVWRSSDDAQRFSEQSAHLLAEFAMPAPTRVAAFETSIFQTG
Ga0318504_100623742	3300032063	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0318510_105142472	3300032064	Soil	FCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADTGGATIIEVWRSSGDAQRFSEDNAHLLAEFGMPPPTRVAAFETSIFQSR
Ga0306924_101499714	3300032076	Soil	PFDRYQQMNDRTESHAGLPEGCRARIVGRGDADGATIIEVWRSSEDAQRFSEQNAHLLAEFGMPPPTRVAAFEDSVFQTG
Ga0318525_105047191	3300032089	Soil	AYCTLPEFDSAFPFDRYQELNDRADGHATLPDGCLSRVVGRPDGAAVIIEVWRSADDAHRFSEKNTHLLAEFGMPAPTRVAAFDTAIFQTG
Ga0318518_101068271	3300032090	Soil	MAFCTLLEWESAFPFDRYQQMNDRTESHAGLPEGCLSRIVGRADGDGATIIEVWRSSEDAQRFSEHNAHLLAEFGMPPPTRVAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083546

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences