Metagenome Family F083443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083443
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	64 residues
Representative Sequence	VEATAKNIDKTARTAREMAEAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKIQEDNARAAQEFFA
Number of Associated Samples	58
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.00 %
% of genes near scaffold ends (potentially truncated)	88.50 %
% of genes from short scaffolds (< 2000 bps)	84.07 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.947 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (38.938 % of family members)
Environment Ontology (ENVO)	Unclassified (38.938 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.717 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.09% β-sheet: 0.00% Coil/Unstructured: 31.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13453	zf-TFIIB	8.85
PF13515	FUSC_2	4.42
PF06224	HTH_42	2.65
PF02371	Transposase_20	2.65
PF13545	HTH_Crp_2	1.77
PF12697	Abhydrolase_6	1.77
PF01844	HNH	0.88
PF07366	SnoaL	0.88
PF00884	Sulfatase	0.88
PF13240	zinc_ribbon_2	0.88
PF01548	DEDD_Tnp_IS110	0.88
PF00462	Glutaredoxin	0.88
PF01872	RibD_C	0.88
PF00068	Phospholip_A2_1	0.88
PF13546	DDE_5	0.88
PF13460	NAD_binding_10	0.88
PF05974	DUF892	0.88
PF01609	DDE_Tnp_1	0.88
PF13612	DDE_Tnp_1_3	0.88
PF01522	Polysacc_deac_1	0.88
PF00903	Glyoxalase	0.88
PF13462	Thioredoxin_4	0.88
PF06736	TMEM175	0.88
PF05239	PRC	0.88
PF05532	CsbD	0.88
PF00188	CAP	0.88
PF02426	MIase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.54
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	2.65
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.88
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.88
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.88
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.88
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.88
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.88
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.88
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.88
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.88
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.95 %
Unclassified	root	N/A	38.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.95 %
Unclassified	root	N/A	38.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.95 %
Unclassified	root	N/A	38.05 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.02 %
Unclassified	root	N/A	38.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.59 %
Unclassified	root	N/A	38.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.42 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	32.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.42 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	32.74 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	4.42 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	32.74 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	4.42 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	11.50 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples	4.42 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	2.65 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	1.77 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	11.50 %
uncultured Ramlibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp.	4.42 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2.65 %
Streptomyces chromofuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chromofuscus	0.88 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	0.88 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005562\|Ga0058697_10049614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1605	Open in IMG/M
3300005562\|Ga0058697_10402523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	679	Open in IMG/M
3300005562\|Ga0058697_10450979	Not Available	648	Open in IMG/M
3300005562\|Ga0058697_10692350	Not Available	541	Open in IMG/M
3300009789\|Ga0126307_10698449	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300009789\|Ga0126307_10771110	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300009789\|Ga0126307_11271489	Not Available	596	Open in IMG/M
3300009840\|Ga0126313_10105990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2075	Open in IMG/M
3300009840\|Ga0126313_10775136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300009840\|Ga0126313_10992088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	688	Open in IMG/M
3300009840\|Ga0126313_11163446	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010036\|Ga0126305_10240746	Not Available	1160	Open in IMG/M
3300010036\|Ga0126305_10437723	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010036\|Ga0126305_10689115	Not Available	690	Open in IMG/M
3300010036\|Ga0126305_10694340	Not Available	688	Open in IMG/M
3300010036\|Ga0126305_11024696	Not Available	567	Open in IMG/M
3300010036\|Ga0126305_11157883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	533	Open in IMG/M
3300010036\|Ga0126305_11203228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	523	Open in IMG/M
3300010037\|Ga0126304_10094348	Not Available	1884	Open in IMG/M
3300010037\|Ga0126304_10487997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	827	Open in IMG/M
3300010037\|Ga0126304_10534009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	789	Open in IMG/M
3300010037\|Ga0126304_10744646	Not Available	663	Open in IMG/M
3300010038\|Ga0126315_10138659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1431	Open in IMG/M
3300010038\|Ga0126315_10497813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	777	Open in IMG/M
3300010038\|Ga0126315_10651082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	684	Open in IMG/M
3300010039\|Ga0126309_10781182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp.	621	Open in IMG/M
3300010040\|Ga0126308_10376187	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010040\|Ga0126308_10466049	Not Available	850	Open in IMG/M
3300010040\|Ga0126308_10574790	Not Available	767	Open in IMG/M
3300010041\|Ga0126312_10285640	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300010041\|Ga0126312_11046099	Not Available	598	Open in IMG/M
3300010042\|Ga0126314_10018663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4158	Open in IMG/M
3300010042\|Ga0126314_10174661	Not Available	1506	Open in IMG/M
3300010042\|Ga0126314_10703673	Not Available	740	Open in IMG/M
3300010042\|Ga0126314_11007728	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010042\|Ga0126314_11369228	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300010044\|Ga0126310_10023533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3126	Open in IMG/M
3300010044\|Ga0126310_10673130	All Organisms → cellular organisms → Bacteria → Terrabacteria group	781	Open in IMG/M
3300010044\|Ga0126310_11304224	Not Available	587	Open in IMG/M
3300010044\|Ga0126310_11412506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	567	Open in IMG/M
3300010044\|Ga0126310_11514484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	551	Open in IMG/M
3300010045\|Ga0126311_10144769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1686	Open in IMG/M
3300010045\|Ga0126311_10245275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300010045\|Ga0126311_10458688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	990	Open in IMG/M
3300010045\|Ga0126311_11046008	Not Available	669	Open in IMG/M
3300010045\|Ga0126311_11151398	All Organisms → cellular organisms → Bacteria → Terrabacteria group	640	Open in IMG/M
3300010166\|Ga0126306_10732536	Not Available	794	Open in IMG/M
3300012684\|Ga0136614_10406183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chromofuscus	995	Open in IMG/M
3300014487\|Ga0182000_10013343	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2048	Open in IMG/M
3300014487\|Ga0182000_10087935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1017	Open in IMG/M
3300014487\|Ga0182000_10183349	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300014488\|Ga0182001_10255083	Not Available	681	Open in IMG/M
3300017789\|Ga0136617_10194707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1711	Open in IMG/M
3300018066\|Ga0184617_1234244	Not Available	549	Open in IMG/M
3300018432\|Ga0190275_10431913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1335	Open in IMG/M
3300018432\|Ga0190275_10509092	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300018432\|Ga0190275_10979351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	916	Open in IMG/M
3300018432\|Ga0190275_11113073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	864	Open in IMG/M
3300018465\|Ga0190269_10527055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	776	Open in IMG/M
3300018466\|Ga0190268_10397938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	884	Open in IMG/M
3300018466\|Ga0190268_11759731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	556	Open in IMG/M
3300018719\|Ga0193596_1066074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	516	Open in IMG/M
3300018757\|Ga0193612_1002838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	3012	Open in IMG/M
3300018875\|Ga0193608_1085820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp.	689	Open in IMG/M
3300018877\|Ga0193600_1072886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp.	824	Open in IMG/M
3300018891\|Ga0193610_1034390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1410	Open in IMG/M
3300018891\|Ga0193610_1161542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	531	Open in IMG/M
3300018906\|Ga0193609_1024731	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300018917\|Ga0193611_1106085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp.	739	Open in IMG/M
3300018918\|Ga0193616_1124394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp.	715	Open in IMG/M
3300018920\|Ga0190273_10882402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	722	Open in IMG/M
3300018933\|Ga0193614_1034593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1437	Open in IMG/M
3300018939\|Ga0193593_1076136	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300018939\|Ga0193593_1112545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300018984\|Ga0193605_1162616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300018984\|Ga0193605_1200254	Not Available	587	Open in IMG/M
3300019132\|Ga0193604_1043353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	639	Open in IMG/M
3300019142\|Ga0193597_1115439	Not Available	823	Open in IMG/M
3300019142\|Ga0193597_1120617	Not Available	800	Open in IMG/M
3300019377\|Ga0190264_10469568	Not Available	847	Open in IMG/M
3300019377\|Ga0190264_11084651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	651	Open in IMG/M
3300019767\|Ga0190267_10757535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	637	Open in IMG/M
3300028810\|Ga0307294_10360913	Not Available	539	Open in IMG/M
3300030513\|Ga0268242_1033588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	917	Open in IMG/M
3300031548\|Ga0307408_102453278	Not Available	507	Open in IMG/M
3300031731\|Ga0307405_11661563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	565	Open in IMG/M
3300031824\|Ga0307413_10237491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1343	Open in IMG/M
3300031903\|Ga0307407_10096034	Not Available	1828	Open in IMG/M
3300031903\|Ga0307407_10986159	Not Available	650	Open in IMG/M
3300031903\|Ga0307407_11273900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	576	Open in IMG/M
3300031995\|Ga0307409_102065703	Not Available	599	Open in IMG/M
3300031995\|Ga0307409_102146469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	588	Open in IMG/M
3300032002\|Ga0307416_100649589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1139	Open in IMG/M
3300032004\|Ga0307414_10629341	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300032004\|Ga0307414_11785573	Not Available	574	Open in IMG/M
3300032080\|Ga0326721_10802582	Not Available	590	Open in IMG/M
3300032126\|Ga0307415_100305296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1320	Open in IMG/M
3300032159\|Ga0268251_10409072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	589	Open in IMG/M
3300034007\|Ga0334936_069071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	731	Open in IMG/M
3300034132\|Ga0334915_142427	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.07%
Host-Associated	Host-Associated	15.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.65%
Plants	Host-Associated → Plants	15.93%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.50%
Phylloplane	Host-Associated → Plants → Phylloplane	4.42%
Freshwater	Environmental → Aquatic → Freshwater	3.54%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.64%
Sand	Environmental → Terrestrial → Soil → Sand	20.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.50%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.42%
Ice	Environmental → Aquatic → Freshwater → Ice	3.54%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.64%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	20.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.50%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.54%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	38.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	20.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	11.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.42%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.42%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.54%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300000436	Soil microbial communities from Colorado Plateau, Greene Butte sample - Light Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018719	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018757	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018906	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300018915	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018917	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018962	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034236	Biocrust microbial communities from Mojave Desert, California, United States - 34SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2210037653	2209111000	Soil	VATTTSIDKMTRTAREMTEAQRDSYQALAESFTASQRRGARLAQDGLRFFKLQEDNARAAQEWFANGVRL
LCrCPGB2_illDRAFT_10523691	3300000436	Soil	MSATTNIEKMTRMAREMTEAQRDSYQAIADSFTASQRRSARLAQDGLKFFKLQEDNARAAQEWFAN
Ga0058697_100496142	3300005562	Agave	VQTTRSIEKTTRTARQMAEVQRDSYEALAENFAAAQRRSMGLAEDGLKFMRLQEEN
Ga0058697_104025232	3300005562	Agave	VPTTRNIDKTTRTTRQMAEAQRDSYEALAENFAAAQRRSIGLAEDGLEFMKLQEDNARAAQEFFANGVRLL
Ga0058697_104509791	3300005562	Agave	VETTAKNFDKTARTAREMAEAQRGSFEALAENFAAAQRRSIGLADDGLEFMKLQEDNARA
Ga0058697_106923501	3300005562	Agave	VATTASIDKTARTARQMAEAQRDSFEAIAENFAAAQHRSIGIAEGGLEFMRLQEDNARAAQEFFA
Ga0126307_106984491	3300009789	Serpentine Soil	MLVQTTRSIEKTTRTARQMTEVQRDSYQALADNLAAAQRRTMGLAEDGLKFMRLQEESARAAQEWFAG
Ga0126307_107711102	3300009789	Serpentine Soil	MTITTNNNIEKTARTAREMAQAQREAYEALSENLAAAQRRTMGLANDGLGFVRLQEDNAR
Ga0126307_112714891	3300009789	Serpentine Soil	MVATTATNIDKTARTAHEMAEAQRDSFEAIAENFAAAQRRSIGIAEGGLEFMRLQEQNARAAQEFFAQGVRLLQ
Ga0126313_101059903	3300009840	Serpentine Soil	MLVQTTRNIDKTTRTARQMAEVQRDSYEALAQNLAAAQHRSMGLAEDGLKFMRLQEENARAAQEWFAGGVK
Ga0126313_107751362	3300009840	Serpentine Soil	MVATTANIDKTTRTTRQMAEAQRDAYEALAENFAAAQRRSIGIAEGGLEFMKLQEDNARA
Ga0126313_109920881	3300009840	Serpentine Soil	VATTATNIEQMARTAREMAEAQRDSFEAIAENFAAAQRRGIGLAEGGLEFMRLQEDNARAAQEFFANGVR
Ga0126313_111634462	3300009840	Serpentine Soil	MLVQTTRNIDKTTRTARQMAEVQRDSYEALAENFAAAQRRTIGLAEDGLKFMRLQEENA
Ga0126305_102407461	3300010036	Serpentine Soil	MVATTANNIDKTARTAHEMAEAQRDSFEAIAENFAAAQRRSIGIAEGGLEYMRLQEQNAR
Ga0126305_104377232	3300010036	Serpentine Soil	MLVQTTRRIEKTTRTARQMAEVQRDSYEALAENLAAAQRRSMGLAEDGLKFMRLQEES
Ga0126305_106891151	3300010036	Serpentine Soil	MLVQTTRNIDKTTRTTRQMAEAQRDSYEALAENLAAAQRRSMGLAEDGLKFMR
Ga0126305_106943402	3300010036	Serpentine Soil	MTTTTNNIEKTARTAREVAEAQRQAQEALSENLAAAQRRAMGLANGGLGFVRLQE
Ga0126305_110246961	3300010036	Serpentine Soil	MVATTTNIDKTARTAQEMAEVQRDSFEAIAENFAAAQRRGIGLAEGGLEFMRLQEENARAAQEFFAN
Ga0126305_111578832	3300010036	Serpentine Soil	VQTTRNIEKTTRTARQMAEVQRDSYEALAENLAAAQRRSMGLAEDGLKFMRLQEENARAAQE
Ga0126305_112032282	3300010036	Serpentine Soil	MLVQTTRNIDKTTRTTRQIAEAQRDAYETLAENFAGVQRRSMGLAEDGLEFMKLQEDNARAAQEWFA
Ga0126304_100943481	3300010037	Serpentine Soil	MTTTTNNIEKTARTAREVAEAQREAYDALGENLAAAQRRAMGLANGGLGFVRL
Ga0126304_104879971	3300010037	Serpentine Soil	MLVQTTRNIDKTTRTARQMAEVQRDSYEALAQNLAAAQRRSMGLAEDGLKFMRLQEENARAAQEWFAG
Ga0126304_105340091	3300010037	Serpentine Soil	MPVEATAKNVDKTARTAYEMAEAQRDSFEAIAENFAAAQRRSIGIAEGGLQFMRLQEDNARAAQEFFANGVR
Ga0126304_107446461	3300010037	Serpentine Soil	MVATTATNIDKTALTAHEMAEAQRDSFEAIAENFAAAQRRSLGIAEGGLEFMRLQEQNARAAQEFFAQGVRLL
Ga0126315_101386594	3300010038	Serpentine Soil	VAITANIDKTARTARQMAEAQRDSFEAIAENFAAAQRRSIGLANYGLEFMKLQEEN
Ga0126315_104978131	3300010038	Serpentine Soil	VATTANIHKTNIDKTARTARQMAEAQRDSFEAIAENFAAAQRRSIGIAEGGLQFMRLQEDNARAAQEFFANGVRL
Ga0126315_106510821	3300010038	Serpentine Soil	VATTATNIEQMARTAREMAEAQRDSFEAIAENFAAAQRRGIGLAEGGLEFMRLQEDNARAAQEFFANG
Ga0126309_107811821	3300010039	Serpentine Soil	VEATAKNVDKMTRTAHEMAEAQRDSFEALAENSAAARRRGMGLAEGGLEFVKLQEDSARAAQEFFAHGVRLLQLQG
Ga0126308_103761871	3300010040	Serpentine Soil	MLVQTTRNIDKTTRTARQMAEVQRDTYEALAENFAAAQRRTIGLAEDGLKFMRLQEENARAAQEWFAGGVK
Ga0126308_104660491	3300010040	Serpentine Soil	VEATAKNVDKTARTAYEMAQAQRDSFESLAENFAAAQRRSMGLAEGGLEFVKLQEDN
Ga0126308_105747902	3300010040	Serpentine Soil	MLVQTTRRIEKTTRTARQMAEVQRDSYEALAENLAAAQRRSMGLAEDGLKFMRLQ
Ga0126312_102856403	3300010041	Serpentine Soil	VQTTRNIEKTTRTARQMAEVQRDSYEALAENLAAAQRRSMGLAEDGLKFMRLQEENARAAQEWFAGGVKL
Ga0126312_110460991	3300010041	Serpentine Soil	MLVEITTNNIEKTARTAREMAQAQREAYEALGENLAAAQRRTMGLANGGLEFMKLQE
Ga0126314_100186636	3300010042	Serpentine Soil	MLVQTTRNIDKTTRTTRQMAEVQRDAYEALAENFAAAQRRSIGIAEGGLEFMRLQEDNARATQ
Ga0126314_101746612	3300010042	Serpentine Soil	MVATTANIDKTTRTTRQMAEAQRDAYEALAENFAAAQRRSIGIAEGGLEFMKLQEDNA
Ga0126314_107036732	3300010042	Serpentine Soil	VATTANIEKTARTAREMAQAQRDSFEAIAENFAAAQRRGIGIAEGGLEFMRLQE
Ga0126314_110077281	3300010042	Serpentine Soil	MLVQTTRSIEKTTRTTRQMAEVQRDSYEALAENFAAAQRRSMGLAEDGLKFMRLQEENAR
Ga0126314_113692282	3300010042	Serpentine Soil	VATTANIDKTARTARQMAEAQRDSFEAIAENFAAAQRRSIGIAEGGLEFMRLQED
Ga0126310_100235331	3300010044	Serpentine Soil	MTITTHNNVEKTARTAREMAQAQREAYEALSENLAAAQRRTMGLANGGLELVRLQEDNARAAQEWFANG
Ga0126310_106731302	3300010044	Serpentine Soil	MLVQTTRNIDKTTRTARQMAEVQRDSYEALAQNLAAAQRRSMGLAEDGLKFMRLQEENARAAQEWFAGGVKL
Ga0126310_113042241	3300010044	Serpentine Soil	VEATAKNVDKTARTAYEMADAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKLQEDNA
Ga0126310_114125062	3300010044	Serpentine Soil	MTITANNIDKTARTTREMAQAQREAYEALSENFAAAQRRTMGLANGGLELVRLQEDNARAAQEWFANGV
Ga0126310_115144841	3300010044	Serpentine Soil	MLVEITTHNNVEKTARTAREMAEAQREAYEVLSENLAAAQRRATGLANGGLEFVRLQEDNARAAREWFADGV
Ga0126310_116815731	3300010044	Serpentine Soil	VISTTNTERVARSAREVTEAQRDAYEALAENLAASQRRTVGLAHDGLEFMKFQEDNARAAQEWFAKGVRLLQLQQRNAEFV
Ga0126311_101447694	3300010045	Serpentine Soil	VQTTRSNIDKTARTAREMAEVQRDAYGALAENLAAAQRRTMGLAEGGLEFMRLQE
Ga0126311_102452752	3300010045	Serpentine Soil	MVATTATNIAKTARTAHEMAEAQRDSFEAIAENFAAAQRRSMGIAEGGLEFMRLQEQNARAAQEFFA
Ga0126311_104586882	3300010045	Serpentine Soil	VATTARDIDETARTAREMAEAQRDSFEAIAENFAAAQRRGIGIAEGGLEFMRLQEDNARAAQ
Ga0126311_110460081	3300010045	Serpentine Soil	VATTANIDKTARTAREMAEAQRGSFEAIAENFAAAQRRGMGLAEGGLEFVRLQENNAK
Ga0126311_111513981	3300010045	Serpentine Soil	VATTARDIDKTARTAREMAEAQHDSFEAIAENFAAAQRRGIGIAEGGLEFMRLQEDNARA
Ga0126306_107325361	3300010166	Serpentine Soil	MLMEATAKNVDKMARTAYEMAEAQRDSFEALAENFASARRRSIGLAEGGLEFVKLQEDNARAAQE
Ga0136620_100704873	3300012186	Polar Desert Sand	MNIDKMTRTAREMAEAQRDSYQALAESLTASQRRGAGLARDGLKFFKLQEDNARAAQEWFANGVRLM
Ga0136613_105225601	3300012681	Polar Desert Sand	MKRFTPTEVKLMTTTTNIDKMTRTAREMAEAQRDSYQALAESLTASQRRGAGLARDGLKFFKLQEDNARAAQEWFANGVR
Ga0136614_104061832	3300012684	Polar Desert Sand	VEATAKNIDKTARTAREMAEAQRDSFEALAENFASARRRSMGLAEGGLKFVQLQEDNARAAQEFFANGVRL
Ga0182000_100133434	3300014487	Soil	VATTATSIDKTARTAYEMAEAQRDAFGAVAENFAAAQRRTIGIAEGGLEFVRLQEDNARAAQEFFA
Ga0182000_100879352	3300014487	Soil	MLVQTTRNIEKTTRTARQMAEVQRDSYEALAENLAAAQRRTMGLAEDGLKFMRLQEENAR
Ga0182000_101833491	3300014487	Soil	MLVQTTRSIEKTTRTARQMAEVQRDSYEALAENFAAAQRRSMGLAEDGLKFMRLQEENAR
Ga0182001_102550832	3300014488	Soil	MLVQTTTNIDKTTRTVRQMAEAQRDAYEALAENFAAAQRRTIGLAEGGLEYMRLQEDSA
Ga0136617_101947073	3300017789	Polar Desert Sand	VQTTRNIDNTTRTVREMAEVQRDSYEALAENFAAAQRRSMGLAEGGLEFVRLQEESARAT
Ga0184617_12342442	3300018066	Groundwater Sediment	MVATTARNIETTARTTREMAEAQRDSFEAIAENFAAAQRRSMGLAESGLEFVKLQEDNAR
Ga0190275_104319133	3300018432	Soil	VEATAKNIEKTARTAREMAEAQRDSFEAIAENFASAQRRSMGLAEGGLKFVKLQED
Ga0190275_105090921	3300018432	Soil	VATTATNIDKTARTVYEMAEAQRDSFEGLAENFAAAQRRSMGLAEGGLEFVKLQEDN
Ga0190275_109793512	3300018432	Soil	VEATAKNVDKTARTAYEMAEAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKLQEDNARAAQEFFANGVRLLRLQ
Ga0190275_111130732	3300018432	Soil	VEATAKNVDKTARTAYEMAQAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKLQEDNARAAQEFFANGVRLL
Ga0190269_105270552	3300018465	Soil	VATTATNIDKTARTAHEMAEAQRDSFEAVAENFAAAQSRGIGLAEGGLEFMRLQEDNARAAQEFFANGV
Ga0190269_119902121	3300018465	Soil	VISTTNTETVARSAREVTEAQRDAYEALAENLAASQRRTVGLAHDGLEFMKLQEDNARAAQEWFAKGVRLLQLQQR
Ga0190268_103979382	3300018466	Soil	MCDKNIAVTNSYPHGGTQVISTTNTETVARSAREVTEAQRDAYEALAENLAASQRRTVGLAHDGLEFMKLQEDNARAAQEWFAKGVRLMQLQ
Ga0190268_117597312	3300018466	Soil	VATTANIDKTARTAHEMAEAQRDSFEALAENFAAAQRRSIGIAEGGLEFMRLQEDNARATQEFFANGV
Ga0193596_10660741	3300018719	Soil	VEATAKNIDNTARTAREMAEAQRDSFEALAENFASAQRRSMGLAEGGLEFVKLQEDN
Ga0193612_10028383	3300018757	Soil	VITTNTEKIGRTAREMAEVQRDSYEAFTENLAAAQRRSIGLAEGGLKFIRLQEDSARAAQEWFANGVRLLE
Ga0193608_10858201	3300018875	Soil	VEATAKNVDKTARTAREMAEAQRDSFEALAENFASAQRRSMGLAEGGLKFVKLQEDNARAAQEF
Ga0193600_10728861	3300018877	Soil	VEATAKNIDKTARTAHEMAEAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKIQEDNARAAQEFFARGVRL
Ga0193610_10343903	3300018891	Soil	VITTNTEKIGRTAREMAEVQRDSYEALAENFAAAQSRSIGLANDGLKFMRLQEDNA
Ga0193610_11615422	3300018891	Soil	VEATAKDIDKTARTAREMAEAQRDSFEALAENLASAQRRGMGLAEGGLEFVRLQEDNA
Ga0193609_10247311	3300018906	Soil	VEATAKNVDKTARTAREMAEAQRDSFEALAENFASAQRRSMGLAEGGLKFVKMQ
Ga0193591_11353192	3300018915	Soil	MSATTNTEKMTRTAREMTEAQRDSYQAIAESFTASQRRSARLAQDGLKFFKLQEDNARVAQEWFANGVRLMQLQQRNADF
Ga0193611_11060851	3300018917	Soil	VEATAKNIDKTARTAREMAEAQRDSFEALAENFAAAQRRGMGLAEGGLEFVKIQEDNARA
Ga0193616_11243941	3300018918	Soil	VEATAKNIDKTARTAREMAEAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKIQEDNARAAQEFFA
Ga0193616_11904942	3300018918	Soil	MNATTNIEKMTRTAREMTEAQRDSYQAIAESFTASQRRSARLAQDGLKFFKLQEDNARVAQEWFANGVRLM
Ga0190273_108824021	3300018920	Soil	VEATAKNVDKTARTAQQIAEAQRDSFEALAENFAAAQRRSIGLAEGGLEFVRLQEDNARAAQEFFANGVRLL
Ga0193614_10345932	3300018933	Soil	VIATRNTENMGRTAREMAEIQRDSYEAFTENLTAAQRRTIGLANGGLEFLRLQEDNTRAAQEWFANGVSLLERQRRN
Ga0193614_10510161	3300018933	Soil	MSTTTNIEKITRTAREMTEAQRDSYQAIAESFTASQRRSARLAQDGLRFFKLQEDNARAAQEWFANGVRLMRLQQ
Ga0193593_10761362	3300018939	Soil	VQTTANTDKTAGTMREMAEAQRDSYGALAENLAAAQRRAIGLADGGLKFMKLQEDNAKA
Ga0193593_11125452	3300018939	Soil	VEATAKDIDKTARTAREMAEAQRDSFEALAENLASAQRRGMGLAEGGLEFVKIQEDNA
Ga0193589_10236641	3300018962	Soil	MSATTNIEKMTRTAREMTEAQRDSYQAIAESFTASQRRGAELAQDGLRFFKLQEDNARVA
Ga0193605_11626161	3300018984	Soil	VEATAKNIDKTARTAREMAEAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKLQ
Ga0193605_12002541	3300018984	Soil	MEATANNVDKMARTAREMAEAQRDSFEAIAENFAAAQRRSMGLAEGGLEFVKIQEDNARAAQEFFA
Ga0193604_10433531	3300019132	Soil	VIATRNTEKMGRTARQMAEIQRDSYEAFTENLTAAQRRSIGLANEGLEFLRLQK
Ga0193597_11154392	3300019142	Soil	VEATAKNIDKTARTAREMAEAQRDSFEALAENFAAAQRRSMGLAEGGLEFVKLQEDN
Ga0193597_11206171	3300019142	Soil	VTTTTNIDDTMRAARQMTEAQRDSYEALTKNLAAAQRRSIGLANGGLEFLRLQEDNAKAT
Ga0190264_101676373	3300019377	Soil	LISTTNTERVARSAREVTEAQRDAYEALAENLAASQQRTVGLAHDGLEFIKVQEDNARAAQEWFA
Ga0190264_104695681	3300019377	Soil	VATITNTEKMGRTAREMADVQRDSYEAFTENLAAAQRRSRELAEGGLEFVKLQENSARAAQE
Ga0190264_110846511	3300019377	Soil	VITTSNTENMGRSAREMAEVQRDSYEAFTENLAATQRRSIELANGGLQFVRLQEDNVRAAQEW
Ga0190267_107575351	3300019767	Soil	VQTTRSIEKTTRTARQMAEVQRDSYEALAENLAAAQRRTMGLAEDGLKFMRLQEENARAAQE
Ga0307294_103609131	3300028810	Soil	VVTTANVDKTARTAQEMAEAQRDAFAAIAQNFAAAQRRSIGLAEGGLEFVKLQEQNARAAQEFFASG
Ga0268242_10335881	3300030513	Soil	VATTATNIDKTTRTAREMAEAQRDAFEAIAGNFAAAQRRGIGLAEGGLEFLRLQEDNARAAQEFFA
Ga0307408_1024532781	3300031548	Rhizosphere	VETTAKNIDKMARAAREMAEAQRDSYEALAENLAAAQRRSIGLAEGGLEFMRLQEDGARVAQ
Ga0307405_116615631	3300031731	Rhizosphere	VATTANIDKTARTAREMAQAQRDSFEAIAENFAAAQRRSIGIAEGGLEFMRLQEDNA
Ga0307413_102374912	3300031824	Rhizosphere	VAITANIDKTTRTAREMAETQRDSYEALAENFAAAQRRSIGLANDGLEFMRLQEDNARAAQEFFAN
Ga0307407_100960341	3300031903	Rhizosphere	VAITANIDKTTRTAREMAETQRDSYEALAENFAAAQRRSIGLANDGLEFMKLQEDNV
Ga0307407_109861591	3300031903	Rhizosphere	MVATTANIDKTTRTARKMAEAQYDSFEALAENFAAAQRRSIGLANDGLEFMRLQ
Ga0307407_112739002	3300031903	Rhizosphere	VATTANIDKTARTTRQMAEAQRHSFEAIAENFAAAQHRSIGIAEGGLEFMRLQEDNAR
Ga0307409_1008273382	3300031995	Rhizosphere	VISTTNTERMARSAREVTEAQRDSYEALAENLAASQRRTVGLAQDGLEFIKLQEDNARAAQEWFANG
Ga0307409_1020657032	3300031995	Rhizosphere	VATTANIDKTARTARQMAEAQRDSFEAIAENFAAAQHRSIGIAEGGLEFMRLQEDNAR
Ga0307409_1021464691	3300031995	Rhizosphere	VTITTNIDRTTRTAWEMAEAQRDSYEALAENFAAIQRRNAGLAEDGLKFLRLQEDNARAAQEWFANGI
Ga0307416_1006495891	3300032002	Rhizosphere	VATTANIDKTARTARQMAEAQRDSFEAIAENFAAAQHRSIGIAEGGLEFMRLPEDNARAAQEFFANGV
Ga0307414_106293411	3300032004	Rhizosphere	VQTTRSIEKTTRTARQMAEVQRDSYEALAENLAAAQRRSMGLAEEGLEFMRLQEESARAAREWF
Ga0307414_117855731	3300032004	Rhizosphere	VQTTRNIEKTTRTARQMAEVQRDSYQALAENLAAAQRRSMGLAEDGLKFMRLQ
Ga0326721_108025821	3300032080	Soil	MATTAMNIDKTAHTAREMAEAQRDSFEAIAENFAAAQRRSIGIAEGGLEFMRLQEDNARAAQEFFAN
Ga0307415_1003052961	3300032126	Rhizosphere	MVATTATNIDKTALTAHEMAEAQRDSFEAIAENFAAAQRRSIGIAEGGLEFMRLQEQNARAAQEFFA
Ga0268251_104090721	3300032159	Agave	VVTTATSIDKTALTAHEMAEAQRDSFEAIAENFAAAQHRGMGLAEGGLEFVRLQE
Ga0334936_069071_3_200	3300034007	Biocrust	VEATAKNVDKTARTAYEMAQAQRDSFEALAENFASAQRRSMGLAEGGLEFVKLQEDNARAAQEFFS
Ga0334915_142427_301_510	3300034132	Hypolithic Biocrust	VASTANIDKTARTAHEMAEAQRDSFEAIAENLAAAQRRSIGIAEDGLEFVRLQEQNARAAQEFFAQGVRL
Ga0334938_115178_3_251	3300034236	Biocrust	MKRHPYGGKLMSTTNIEKMTRTAREMTEAQRDSYQAIAESFTASQRRSARLAQDGLRFFKLQEDNARAAQEWFANGVRLMQLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences