Metagenome Family F083420

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083420
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	102 residues
Representative Sequence	RPGYPPQLDAPNLLPDKPVPKSSAAGPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Number of Associated Samples	108
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.11 %
% of genes near scaffold ends (potentially truncated)	81.42 %
% of genes from short scaffolds (< 2000 bps)	75.22 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.071 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.354 % of family members)
Environment Ontology (ENVO)	Unclassified (28.319 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.212 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.64% β-sheet: 0.00% Coil/Unstructured: 55.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02575	YbaB_DNA_bd	69.91
PF13662	Toprim_4	10.62
PF02132	RecR	7.08
PF03259	Robl_LC7	4.42
PF00633	HHH	1.77
PF00025	Arf	0.88
PF01066	CDP-OH_P_transf	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	69.91
COG0353	Recombinational DNA repair protein RecR	Replication, recombination and repair [L]	7.08
COG2018	Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family	Signal transduction mechanisms [T]	4.42
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.88
COG1100	GTPase SAR1 family domain	General function prediction only [R]	0.88
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.88
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.07 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.07 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.07 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	76.11 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	76.11 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	47.79 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	26.55 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	47.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.55 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	46.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.55 %
Unclassified	root	N/A	15.93 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	35.40 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.55 %
Unclassified	root	N/A	15.93 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	9.73 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.77 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	35.40 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.55 %
Unclassified	root	N/A	15.93 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	9.73 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908041\|P3_CLC_ConsensusfromContig46904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2475	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13424184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300000878\|AL9A1W_1312133	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300000881\|JGI10215J12807_1276702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	779	Open in IMG/M
3300001324\|A2635W6_153130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300001409\|JGI20185J14861_1003377	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1549	Open in IMG/M
3300001417\|JGI20196J14858_1024504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
3300001475\|JGI12361J15250_1004627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	728	Open in IMG/M
3300002568\|C688J35102_120046019	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300002907\|JGI25613J43889_10121323	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	663	Open in IMG/M
3300004156\|Ga0062589_101348789	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300004157\|Ga0062590_102285989	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300004479\|Ga0062595_100339950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1038	Open in IMG/M
3300004480\|Ga0062592_100069221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2030	Open in IMG/M
3300005336\|Ga0070680_100618914	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	930	Open in IMG/M
3300005457\|Ga0070662_101454265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300005458\|Ga0070681_10110795	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2684	Open in IMG/M
3300005530\|Ga0070679_100061707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3737	Open in IMG/M
3300005530\|Ga0070679_100572067	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005545\|Ga0070695_100551483	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005547\|Ga0070693_100901609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	662	Open in IMG/M
3300005574\|Ga0066694_10052906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1850	Open in IMG/M
3300005578\|Ga0068854_100237569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1449	Open in IMG/M
3300005615\|Ga0070702_101415621	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300006031\|Ga0066651_10458897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	676	Open in IMG/M
3300006881\|Ga0068865_100350936	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300009090\|Ga0099827_10086829	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2457	Open in IMG/M
3300009148\|Ga0105243_12603410	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300009174\|Ga0105241_12050142	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300010044\|Ga0126310_11135106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	624	Open in IMG/M
3300010159\|Ga0099796_10057070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1372	Open in IMG/M
3300010229\|Ga0136218_1029515	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
3300010301\|Ga0134070_10191922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	746	Open in IMG/M
3300010364\|Ga0134066_10121655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	786	Open in IMG/M
3300011971\|Ga0120175_1030128	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	643	Open in IMG/M
3300012043\|Ga0136631_10000802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9909	Open in IMG/M
3300012200\|Ga0137382_10606066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	782	Open in IMG/M
3300012207\|Ga0137381_11037558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	706	Open in IMG/M
3300012351\|Ga0137386_10359819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1047	Open in IMG/M
3300012357\|Ga0137384_10918089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	705	Open in IMG/M
3300012925\|Ga0137419_10321920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1188	Open in IMG/M
3300012944\|Ga0137410_11492659	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	590	Open in IMG/M
3300012955\|Ga0164298_11248505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300012989\|Ga0164305_12016922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300014031\|Ga0120173_1001136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3620	Open in IMG/M
3300014058\|Ga0120149_1124561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	700	Open in IMG/M
3300014745\|Ga0157377_10751517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	714	Open in IMG/M
3300014827\|Ga0120171_1042790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1452	Open in IMG/M
3300015356\|Ga0134073_10356853	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300017656\|Ga0134112_10526960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300017695\|Ga0180121_10219469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	709	Open in IMG/M
3300017792\|Ga0163161_11524054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300018056\|Ga0184623_10246373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	816	Open in IMG/M
3300018071\|Ga0184618_10312645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	670	Open in IMG/M
3300018422\|Ga0190265_11247906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	861	Open in IMG/M
3300018422\|Ga0190265_13233414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300018431\|Ga0066655_10446398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	854	Open in IMG/M
3300018432\|Ga0190275_11434988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	767	Open in IMG/M
3300018468\|Ga0066662_11439192	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	715	Open in IMG/M
3300019880\|Ga0193712_1133239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300019883\|Ga0193725_1122861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	589	Open in IMG/M
3300020022\|Ga0193733_1056455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1107	Open in IMG/M
3300021363\|Ga0193699_10091253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1223	Open in IMG/M
3300021413\|Ga0193750_1098037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300021972\|Ga0193737_1045482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	630	Open in IMG/M
3300022756\|Ga0222622_10143376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1531	Open in IMG/M
3300022756\|Ga0222622_11186888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300024055\|Ga0247794_10241345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300025891\|Ga0209585_10264282	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	684	Open in IMG/M
3300025899\|Ga0207642_10038424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2072	Open in IMG/M
3300025905\|Ga0207685_10488707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	646	Open in IMG/M
3300025932\|Ga0207690_10505311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	978	Open in IMG/M
3300025933\|Ga0207706_10837884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	779	Open in IMG/M
3300025937\|Ga0207669_10416454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1056	Open in IMG/M
3300025960\|Ga0207651_10726378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	877	Open in IMG/M
3300026300\|Ga0209027_1093090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1091	Open in IMG/M
3300026312\|Ga0209153_1142306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	902	Open in IMG/M
3300026323\|Ga0209472_1024853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2807	Open in IMG/M
3300027360\|Ga0209969_1034809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	775	Open in IMG/M
3300027378\|Ga0209981_1017765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1005	Open in IMG/M
3300027462\|Ga0210000_1009640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1423	Open in IMG/M
3300027543\|Ga0209999_1009726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1735	Open in IMG/M
3300027674\|Ga0209118_1027289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1771	Open in IMG/M
3300027695\|Ga0209966_1036516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1011	Open in IMG/M
3300027738\|Ga0208989_10033979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1766	Open in IMG/M
3300027738\|Ga0208989_10217228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300028716\|Ga0307311_10165628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300028778\|Ga0307288_10394222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300028787\|Ga0307323_10327378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300028814\|Ga0307302_10208280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	955	Open in IMG/M
3300028824\|Ga0307310_10201645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	939	Open in IMG/M
3300028828\|Ga0307312_10047788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2548	Open in IMG/M
3300028875\|Ga0307289_10234453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	755	Open in IMG/M
3300028880\|Ga0307300_10038392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1327	Open in IMG/M
3300028881\|Ga0307277_10381509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.19%
Host-Associated	Host-Associated	15.93%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.99%
Plants	Host-Associated → Plants	15.93%
Aquatic	Environmental → Aquatic	6.19%
Lab Enrichment	Engineered → Lab Enrichment	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.08%
Sediment	Environmental → Aquatic → Sediment	4.42%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.72%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Ice	Environmental → Aquatic → Freshwater → Ice	1.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.77%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.31%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.42%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.65%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300001324	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A26-35cm)- 6 month illumina	Environmental	Open in IMG/M
3300001409	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012	Environmental	Open in IMG/M
3300001417	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012	Environmental	Open in IMG/M
3300001475	Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN102	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010229	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1	Engineered	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011971	Permafrost microbial communities from Nunavut, Canada - A7_80cm_12M	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014031	Permafrost microbial communities from Nunavut, Canada - A35_80cm_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_CLC_02581070	2124908041	Soil	VPSGSVRTQPAQASVARTAQRPATKPGYPPQLDAPNALPPSVASKPSTPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
ICChiseqgaiiFebDRAFT_134241841	3300000363	Soil	PQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
AL9A1W_13121332	3300000878	Permafrost	GADSPANGERTEARSGSVRAQPVPATVARTVQRPATRPGYPPQLSAPNALPPETSARTPSPVNEGQLGEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
JGI10215J12807_12767021	3300000881	Soil	GLGGESTPSENSQPVSGSVRAQASQASVARTAQRPTTRPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
A2635W6_1531301	3300001324	Permafrost	LKGLGAESSVGSERGETASGSIRAQPAQASVARTVQRPATRPGYPPQLSAPNALPPEAPAKSATPVNEGQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
JGI20185J14861_10033775	3300001409	Arctic Peat Soil	APNALPPSVASKPSTPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
JGI20196J14858_10245042	3300001417	Arctic Peat Soil	AQASVARTAQRPATKAGYPPQLDAPNALPPSVASKPSTPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
JGI12361J15250_10046271	3300001475	Soil	DAPNAVPVEKLAPKSSPAANDAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
C688J35102_1200460191	3300002568	Soil	PPQLDAPNAVPVEKPAPKSSPAANDAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
JGI25613J43889_101213231	3300002907	Grasslands Soil	APNALPPSVTPKPSAAPVNEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQRDPALGAAIDELDLELLD*
Ga0062589_1013487891	3300004156	Soil	AQNPQPAVARTVQRPATRPGYPPQIDAPNTPVSKPDSRQSSAPPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD*
Ga0062589_1014604592	3300004156	Soil	MALLDRTVAIEDLLKGLGGESTPGENSQPVSGSVRAQASQASVARTAQRPTTRPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0062590_1022859891	3300004157	Soil	SQASVARTAQRPTTRPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0062595_1003399501	3300004479	Soil	APNALPIEKTGQGGGVAAGPPKAAPSSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0062592_1000692211	3300004480	Soil	QSAVARTAQRPSTRPGYPPQLDVPNPTAATGGTPPAPKASAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0066671_101083514	3300005184	Soil	MALLDRTVALEDLLKGLSGEAFSFEREAASNSIRAEPAVASVARPSQRPATRAGYPPQLEAPNALPDKPAPKSGAAGPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD*
Ga0070680_1006189141	3300005336	Corn Rhizosphere	TPRPAPRPATRPGYPPQLDAPNLVTDKPQPKTSASGPNESQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0070662_1014542651	3300005457	Corn Rhizosphere	LEAPNAVPTENPPRKASAPAPNEAQLLEMKRAMETTAQDSNRSRMTPEALKQERIGMLRQRDPALGAAIDELDLELLD*
Ga0070681_101107951	3300005458	Corn Rhizosphere	VRAQPAQPFVARTEQRPATRPGYPPQLTAPNALPIEKTGQGGGVAAGPPKAAPSSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0070679_1000617078	3300005530	Corn Rhizosphere	PATRPGYPPQLDAPNAIPAERPAPKSSAPANDSQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0070679_1005720673	3300005530	Corn Rhizosphere	VRAQAPQPAVARTVQRPATRPGYPPQIDAPNSPATKPDTRQSSAAPANDSQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD*
Ga0070695_1005514831	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LEAPNALPPEKPTPKSAAPVAPVRPNEGLQEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0070693_1009016092	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	QLDAPNLVTDKPQPKTSASGPNESQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0066670_101432051	3300005560	Soil	MLLVRMALLDRTVALEDLLKGLGGESAAPDRDAASAAAPTAGTPRMQPTAARPTTRPGYPPQLDAPNLLPDKPVPKSSAAGPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0066694_100529065	3300005574	Soil	RPATRPGYPPQLDAPNALTQPEREPPKSSAPGPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0068854_1002375694	3300005578	Corn Rhizosphere	GAIAERGEQPSGSVRAQAPQPAVARTVQRPATRPGYPPQIDAPNSPATKPDTRQSSAAPANDSQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD*
Ga0070702_1014156211	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PQASVARSAPRPATRPGYPPQLDAPNAIPAERPAPKSSAPANDSQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0066795_102144932	3300005938	Soil	VALEDLLKGLGGEATPAARGESTPGSPKADVPGASVRTQPAQASVARTAQRPSTKPGYPPQLDAPNTLPPSVASKPSAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0066651_104588971	3300006031	Soil	PGYPPQLDAPNALTQPEREPPKSSAPGPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0068865_1003509361	3300006881	Miscanthus Rhizosphere	RSPAPQASVARWAPRPATRPAYPPQLEAPNAIRVERPTPKSSAPPNDSQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0075524_100990513	3300006950	Arctic Peat Soil	LLIRMALLDRTVALEDMLKGLGGEATQGAAKAEVPSGSVRTQPAQASVARTAQRPATKPGYPPQLDAPNALPPSVASKPSTPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0066793_108817201	3300009029	Prmafrost Soil	LLKGLGGEATPAARGESTPGSPKADVPGASVRTQPAQASVARTAQRPSTKPGYPPQLDAPNTLPPSVASKPSAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0099827_100868296	3300009090	Vadose Zone Soil	GSVWTQPSQASVARTAQRPSTRPGYPPQIDAPNALPPTVAPKSSASPVNEGQLREMKRAMETTAKDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0099792_101273393	3300009143	Vadose Zone Soil	LLDRTVALEDLLKGLGGEAASLPARAEPQSGTVRAQTPQGAVARTAQRPSTRPGYPPQLDTPNSLSQNAPSSPAPSTSPESETQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0105243_126034101	3300009148	Miscanthus Rhizosphere	PGGENSQPVSGSVRAQASQASVARTAQRPTTRPGYPPQIEVPIPTAASISPAPKAPAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0105241_120501422	3300009174	Corn Rhizosphere	VARSAPRPATRPGYPPQLDAPNAIPAERPAPKSSAPANDSQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0126310_111351062	3300010044	Serpentine Soil	EMLKGLAGESSSSTEEPGISRGSVRAQTPQASVARTVQRPSTRPGYPPQLEAPNAISPNLIPKASLSVANEGQLSEMKRAMETTAQDSNRSRMAPEALREERIGMLRQKDPALGAAIDELDLELLD*
Ga0099796_100570701	3300010159	Vadose Zone Soil	VRTQPAPASIARATPRPAVKPGYPPQIDAPNVLPPNAAARPVASPANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0136218_10295152	3300010229	Soil	PQIDAPNTPAVPAAPKQSAVPNETQLLEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGMAIDELDLELLD*
Ga0134070_101919221	3300010301	Grasslands Soil	PQASVARSSPRPATRPGYPPQLDAPNALPPEMPASKFSSAAPGGANETQLNEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0134066_101216553	3300010364	Grasslands Soil	PQLDAPNMLPDKPAPKSSAAGPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0120175_10301281	3300011971	Permafrost	PQLSTPNALAPETPARTPTPANEGQLREMKRAMETTAQDSKRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0136631_1000080213	3300012043	Polar Desert Sand	MSPSAAVARSAARSAPATRPGYPPQLAAPNALAPTGAGKGQLQEMKKAMDATAQDSNRSRMTPEALKEERIGMLRRKDPALGAAIDELDLELLD*
Ga0137382_106060661	3300012200	Vadose Zone Soil	RPGYPPQLDAPNALPPAVAPKAPAAPVNEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQRDPALGAAIDELDLELLD*
Ga0137381_110375581	3300012207	Vadose Zone Soil	PGYPPQLEAPNTLQPDAPPNASAAAPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGLLRQKDPALGVAIDELDLELLD*
Ga0137386_103598191	3300012351	Vadose Zone Soil	QLEAPNTLQPDAPPNASAAAPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGLLRQKDPALGVAIDELDLELLD*
Ga0137384_109180891	3300012357	Vadose Zone Soil	PQLDAPNALPPAVTPKPSAAPVNEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0137413_103123383	3300012924	Vadose Zone Soil	ALEDLLKGLGGEATSATNSEASSGAVRTQPAQASVARAIPRPVVKPGYPPQIDAPNVLPPNAAARPVASPANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD*
Ga0137419_103219203	3300012925	Vadose Zone Soil	STRPGYPPQLDTPNSLPPNPGPAAVPASAQNETQLSEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0137410_114926591	3300012944	Vadose Zone Soil	LDAPNVPSVVGATASKPAASPNEGQLSEMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0164298_112485051	3300012955	Soil	TRPGYPPQLDAPNALGKAAPARPPQAANEGQLQEMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0164305_120169221	3300012989	Soil	QPASGSVRAQSPQPAVARAVQRAPVRPGYPPQLDAPNTPVQNAAPKSSSAQPNEAQLLEMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGMAIDELDLELLD*
Ga0120173_10011368	3300014031	Permafrost	SVRAQSPQASVARTVQRPVTRPGYPPQLSTPNTLSGETPARTPTPANEGQLREMKRAMETTAQDSKRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0120149_11245612	3300014058	Permafrost	PQLSAPNALPPETPAKTHAKAPAPPANEGQLREMKRAMETTAQDSNRSRMTPEALKEERMGMLRQKDPALGAAIDELDLELLD*
Ga0134079_105581092	3300014166	Grasslands Soil	LVEMLLVRMALLDRTVQLEDLLKGLSPDASSTEREPSRLTASVSQSAPVSQPAHRPATRPGYPPQLDAPNALTQPEREPPKSSAPGQNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0157377_107515171	3300014745	Miscanthus Rhizosphere	PNAVPTEKPPRKGLAPAPNDAQLLEMKRAMETTAQDTNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0120171_10427904	3300014827	Permafrost	GYPPQIDAPNALPPATVSKPPGPGANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0134073_103568531	3300015356	Grasslands Soil	APNAVPVEKPAPKSSPAANDAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD*
Ga0134069_13360702	3300017654	Grasslands Soil	MALLDRTVALEDLLKGLGGESTDAGRIESSSGSVRAQAAQSSVARTAQRPDTRPGYPPQLEAPNTLQPDAPPKASAAVPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGLLRQKDPALGVAIDELDLELLD
Ga0134112_105269602	3300017656	Grasslands Soil	PGYPPQLEAPNALPVAPVPPNKQNAPNESQLREMKRAMETTAQDSNASRMTPERIKEERIGMLRQKDPALGAAIDELDLELLD
Ga0180121_102194692	3300017695	Polar Desert Sand	ARVPSQSGDAGGGGQAGRVLTPNPAVARSGQRSAPPTRPGYPPQLAAPNALPVTVAGKGQLQEMKKAMEATAQDSNRSRMTPEALKEERIGMLRRKDPALGAAIDELDLELLD
Ga0163161_115240542	3300017792	Switchgrass Rhizosphere	PATRPGYPPQLDAPNAVPTEKPPRKGSAPAPNDAQLLEMKRAMETTAQDTNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0184620_103292411	3300018051	Groundwater Sediment	EDLLKGLGGEGTASVENPEPPSGSVRTQPTQAAVARTSQRPTTRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0184623_102463731	3300018056	Groundwater Sediment	SASPQASVARTVQRPNTRPGYPPQLDAPNSPSTAGPTVSQAAAPLPNEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGILRQKDPALGTAIDELDLELLD
Ga0184618_103126452	3300018071	Groundwater Sediment	YPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0190265_112479061	3300018422	Soil	RPTTRPGYPPQLEAPNAASASAAMALAPPANEVQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0190265_132334142	3300018422	Soil	VRMALLDRTVALEDLLKEIGGEGVPRTGRVERQTPPTRPGYPPQLAAPNALPAATSANKGQLQEMKRAMEATAQDSNRSRMTPEALKQERIGMLRRKDPALGAAIDELDLELLD
Ga0190272_100544531	3300018429	Soil	MALLDRTVAIEELLKGLGGESTPGAENSQPASGSVRAQVSQASVARTAQRPATRPGYPPQIEVPIPTPAAVSAVAKPAAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0066655_104463981	3300018431	Grasslands Soil	DSGGPSGSQTRSEPSGGAIRAPAQQQAVARTTQRPTTRPGYPPQLPAPNALPADRTPSPSSAQNETQLNEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0190275_114349883	3300018432	Soil	VLSPSPAVARTSQRASPPTRPGYPPQLAAPNALPATGTAGMGQLQEMKKAMEATAQDSNRSRMTPEALKEERIGMLRRKDPALGAAIDELDLELLD
Ga0066662_114391922	3300018468	Grasslands Soil	PATRPGYPPQLDAPNAVTDKPAPKSSAATPNEGQLLEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0193712_11332392	3300019880	Soil	DAPNSLPPTPAAKPAPPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD
Ga0193725_11228612	3300019883	Soil	APNIPAVTAPPASKTPSPSVNEGQLREMKRAMETTAQDSNRSRMTPEAIKEERIGMLRQKDPALGAAIDELDLELLD
Ga0193733_10564553	3300020022	Soil	TQAAVARTSQRPATRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0193699_100912531	3300021363	Soil	PTRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0193750_10980371	3300021413	Soil	ATRPGYPPQLSAPNALPPEMPAKAPSPVNEGQLGEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0182009_101627103	3300021445	Soil	IDRTVAIEDLLRGLGEGASGSRDRGEPPKGSVRAPAAQASVARTAQRPVTRPGYPPQIPAPNALPIEPPKTTGSQANEDQLNEMKRAMETTAQDSNRSRMTPEAIKEERIGMLRQKDPALGAAIDELDLELLD
Ga0193737_10454821	3300021972	Soil	TPGAENNQPASGSVRAQVSQASVARTAQRPTTRPGYPPQIEVPIPPPAAVSAVAKPAAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0222622_101433761	3300022756	Groundwater Sediment	TQPTQAAVARTSQRPTTRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0222622_111868881	3300022756	Groundwater Sediment	QIEVAIPSPAPTAAPAVSKPSTSSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0247794_102413452	3300024055	Soil	NPQPAVARTVQRPATRPGYPPQIDAPNTPVSKPDSRQSSAPPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD
Ga0209585_102642821	3300025891	Arctic Peat Soil	FAAPCVGEATQGAAKAEVPSGSVRTQPAQASVARTAQRPATKPGYPPQLDAPNALPPSVASKPSTPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0207642_100384241	3300025899	Miscanthus Rhizosphere	GYPPQLEAPNAVPVERPTPKSSAPPNDSQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0207685_104887072	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	PQLDAPNALPPNATPKPAASSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD
Ga0207690_105053113	3300025932	Corn Rhizosphere	QPSGAVRAQNPQPAVARTVQRPATRPGYPPQIDAPNTPVSKPDSRQSSAPPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD
Ga0207706_108378843	3300025933	Corn Rhizosphere	MPSGSVRAQSPQPAVARTAQRPATRPGYPPQLDAPNTPANPSTKQSAPAPNEAQLAEMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGMAIDELDLELLD
Ga0207669_104164543	3300025937	Miscanthus Rhizosphere	EPSTGSVRSPAPQASVARSAPRLATRPGYPPQLEAPNAVPVERPTPKSSAPPNDSQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0207667_101160926	3300025949	Corn Rhizosphere	SDYSQAFWQMPNVLVHTWSLSVEAHFYLVWPFAVLLLVRMALLDRTVALEEMLRGLGGDSSVGVDRAESTRGSVRAQPAQPFVARTEQRPATRPGYPPQLTAPNALPIEKTGQGGGVAAGPPKAAPSSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0207651_107263782	3300025960	Switchgrass Rhizosphere	PATRPGYPPQLEAPNALPPEKPTPKSAALVAPVRPNEGQLQEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209027_10930903	3300026300	Grasslands Soil	APRPATRPGYPPQLDAPNAVTDKPAPKSSATTPNEGQLLEMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209153_11423061	3300026312	Soil	RPGYPPQLDAPNLLPDKPVPKSSAAGPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209472_10248537	3300026323	Soil	LDAPNALTQPEREPPKSSAPGPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209161_100623556	3300026548	Soil	MALLDRTVALEDLLKGLGGESTDAGRIEWSSGSVRAQAAQSSVARTAQRPDTRPGYPPQLEAPNTLQPDAPPKASAAAPNESQLREMKRAMEATAQDSNRSRMTPEALKEERIGLLRQKDPALGVAIDELDLELLD
Ga0209969_10348093	3300027360	Arabidopsis Thaliana Rhizosphere	RPTTRPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209981_10177653	3300027378	Arabidopsis Thaliana Rhizosphere	QPVSGSVRAQASQASVARTAQRPTTRPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0210000_10096401	3300027462	Arabidopsis Thaliana Rhizosphere	GESTPSENSQPVSGSVRAQASQASVARTAQRPTTRPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209999_10097265	3300027543	Arabidopsis Thaliana Rhizosphere	RPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209118_10272895	3300027674	Forest Soil	SVRSQPAQASVARTVQRPATRPGYPPQLSAPNALAAETPAKPPTQVNEGQLREMKRAMEATAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0209966_10365161	3300027695	Arabidopsis Thaliana Rhizosphere	GGESTPGENSQPVSGSVRAQASQASVARTAQRPTTRPGYPPQIEVPIPTPASISPAQKATAPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELL
Ga0208989_100339795	3300027738	Forest Soil	PAGSDREEKSSGSVRVQPPQASVARTVQRPATRPGYPPQLSTPNALPPEVPAKSASPANEGQLREMKRAMETTAQDSKRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0208989_102172281	3300027738	Forest Soil	RGEAPSGSVRAQPAQASVARTVQRPATRPGYPPQLSMPNAVPSEPPAKSSSPANEGQLREMKRAMEATAQDSNRSRMTPEAIKEERIGMLREKDPALGAAIDELDLELLD
Ga0209590_106703321	3300027882	Vadose Zone Soil	PNALPPTVAPKSSASPVNEGQLREMKRAMETTAKDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307311_101656282	3300028716	Soil	SVRSQAAQASVARMAQRPSTRPGYPPQLEMPNSPAADAPASRPAAPSANEGQLREMKRAMETTAQDSNRSRMTPEAIKEERIGILRQKDPALGAAIDELDLELLD
Ga0307288_103942222	3300028778	Soil	YPPQLDVTHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307323_103273782	3300028787	Soil	QRPATRPGYPPQLDVAHLAPGAGASPAVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307305_103991011	3300028807	Soil	EMLLIRMALLDRTVAIEDLLKGLGGEGTSSVENPEPPSGSVRTQPTQAAVARTSQRPTTRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307302_102082803	3300028814	Soil	QRPTARPGYPPQIEVAIPSPAPTAAPAVSKPSASSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307310_102016451	3300028824	Soil	QRPTTRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307312_100477886	3300028828	Soil	TRPGYPPQIDAPNALPPAAVSKPPAPGVNEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307289_102344531	3300028875	Soil	GGEGAASVENPEPPSGSVRTQPTQAAVARTSQRPTTRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0307300_100383921	3300028880	Soil	GAASVENPEPPSGSVRTQPTQAAVARTSQRPTTRPGYPPQLDVAHLAPGAGASPPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELL
Ga0307277_103815092	3300028881	Soil	LLKGLGGEGTSSVENPEPPSGSVRTQPTQAAVARTSQRPTTRPGYPPQLDVAHLAPGAGASAPVPKVPSPSANEGQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGAAIDELDLELLD
Ga0310813_100970391	3300031716	Soil	ALEDVLKGLAEASGTERMEQPSGAVRAQNPQPAVARTVQRPATRPGYPPQIDAPNTPVSKPDSRQSSAPPNEAQLREMKRAMETTAQDSNRSRMTPEALKEERIGMLRQKDPALGTAIDELDLELLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083420

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences