NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F083400

Metagenome / Metatranscriptome Family F083400

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083400
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 120 residues
Representative Sequence MPSNEHTAIGTISDITKSLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Number of Associated Samples 91
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.30 %
% of genes near scaffold ends (potentially truncated) 40.71 %
% of genes from short scaffolds (< 2000 bps) 83.19 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (56.637 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(21.239 % of family members)
Environment Ontology (ENVO) Unclassified
(34.513 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.903 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.76%    β-sheet: 44.72%    Coil/Unstructured: 45.53%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00753Lactamase_B 25.66
PF00004AAA 11.50
PF06480FtsH_ext 2.65
PF14417MEDS 1.77
PF01434Peptidase_M41 0.88
PF08447PAS_3 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 3.54


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.64 %
UnclassifiedrootN/A43.36 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_10504268All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1096Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0686232Not Available1197Open in IMG/M
3300000881|JGI10215J12807_1189650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_291012Open in IMG/M
3300000956|JGI10216J12902_114838238Not Available582Open in IMG/M
3300001431|F14TB_105147753Not Available645Open in IMG/M
3300004013|Ga0055465_10112949All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium825Open in IMG/M
3300004114|Ga0062593_100003080All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6312Open in IMG/M
3300004114|Ga0062593_101946316Not Available651Open in IMG/M
3300004157|Ga0062590_101502264Not Available676Open in IMG/M
3300004643|Ga0062591_100128691All Organisms → cellular organisms → Bacteria1713Open in IMG/M
3300005093|Ga0062594_100990403All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300005093|Ga0062594_101786661Not Available647Open in IMG/M
3300005295|Ga0065707_10109877All Organisms → cellular organisms → Bacteria2453Open in IMG/M
3300005328|Ga0070676_10361890Not Available1000Open in IMG/M
3300005328|Ga0070676_10779695All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29704Open in IMG/M
3300005330|Ga0070690_100189809All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300005333|Ga0070677_10007376All Organisms → cellular organisms → Bacteria3666Open in IMG/M
3300005334|Ga0068869_100232204All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300005347|Ga0070668_100998193All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300005365|Ga0070688_100762767Not Available754Open in IMG/M
3300005366|Ga0070659_101039935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29720Open in IMG/M
3300005441|Ga0070700_100967566Not Available698Open in IMG/M
3300005456|Ga0070678_100821921Not Available845Open in IMG/M
3300005457|Ga0070662_101188530Not Available655Open in IMG/M
3300005459|Ga0068867_101171727All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300005544|Ga0070686_100125732All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1766Open in IMG/M
3300005577|Ga0068857_101242373All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300005615|Ga0070702_100668491All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300005719|Ga0068861_100273415All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1452Open in IMG/M
3300005719|Ga0068861_100940140Not Available821Open in IMG/M
3300005719|Ga0068861_101426651Not Available677Open in IMG/M
3300006853|Ga0075420_100251780All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1535Open in IMG/M
3300009094|Ga0111539_10799380Not Available1098Open in IMG/M
3300009098|Ga0105245_12430802Not Available577Open in IMG/M
3300009100|Ga0075418_10838188Not Available993Open in IMG/M
3300009176|Ga0105242_11658562Not Available674Open in IMG/M
3300010399|Ga0134127_11736249All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300010403|Ga0134123_13162686Not Available529Open in IMG/M
3300011333|Ga0127502_10577232Not Available529Open in IMG/M
3300012039|Ga0137421_1103000Not Available823Open in IMG/M
3300012895|Ga0157309_10056640All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium988Open in IMG/M
3300012907|Ga0157283_10053610All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300013096|Ga0157307_1012903All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300013296|Ga0157374_12659292Not Available528Open in IMG/M
3300015371|Ga0132258_13030289All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1164Open in IMG/M
3300015372|Ga0132256_100128706All Organisms → cellular organisms → Bacteria → Acidobacteria2510Open in IMG/M
3300015373|Ga0132257_100699667All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300015374|Ga0132255_100386463All Organisms → cellular organisms → Bacteria → Acidobacteria2034Open in IMG/M
3300015374|Ga0132255_102199706All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29841Open in IMG/M
3300017792|Ga0163161_10621371All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300018055|Ga0184616_10060633All Organisms → cellular organisms → Bacteria1286Open in IMG/M
3300018083|Ga0184628_10024445All Organisms → cellular organisms → Bacteria2992Open in IMG/M
3300018083|Ga0184628_10201227Not Available1042Open in IMG/M
3300018469|Ga0190270_10117131All Organisms → cellular organisms → Bacteria2085Open in IMG/M
3300018476|Ga0190274_12176995Not Available651Open in IMG/M
3300018476|Ga0190274_13481947Not Available531Open in IMG/M
3300018481|Ga0190271_10014874All Organisms → cellular organisms → Bacteria5750Open in IMG/M
3300018481|Ga0190271_10034587All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4126Open in IMG/M
3300018481|Ga0190271_10612547Not Available1208Open in IMG/M
3300019361|Ga0173482_10039988All Organisms → cellular organisms → Bacteria → Acidobacteria1471Open in IMG/M
3300019362|Ga0173479_10567875Not Available587Open in IMG/M
3300022880|Ga0247792_1115602Not Available560Open in IMG/M
3300023102|Ga0247754_1105157Not Available684Open in IMG/M
3300025893|Ga0207682_10004393All Organisms → cellular organisms → Bacteria → Acidobacteria5905Open in IMG/M
3300025893|Ga0207682_10009924All Organisms → cellular organisms → Bacteria3742Open in IMG/M
3300025901|Ga0207688_10006631All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6296Open in IMG/M
3300025907|Ga0207645_10064565All Organisms → cellular organisms → Bacteria2339Open in IMG/M
3300025907|Ga0207645_10651368All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29716Open in IMG/M
3300025908|Ga0207643_10386702Not Available883Open in IMG/M
3300025923|Ga0207681_11068249Not Available678Open in IMG/M
3300025932|Ga0207690_10485512Not Available998Open in IMG/M
3300025936|Ga0207670_11259897Not Available627Open in IMG/M
3300025938|Ga0207704_11412952Not Available596Open in IMG/M
3300025945|Ga0207679_11467737Not Available626Open in IMG/M
3300026095|Ga0207676_10317861All Organisms → cellular organisms → Bacteria1428Open in IMG/M
3300026118|Ga0207675_100557617All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300027907|Ga0207428_10685893Not Available733Open in IMG/M
3300028380|Ga0268265_10122950All Organisms → cellular organisms → Bacteria → Acidobacteria2142Open in IMG/M
3300028587|Ga0247828_10177259Not Available1092Open in IMG/M
3300028812|Ga0247825_10007401All Organisms → cellular organisms → Bacteria → Acidobacteria7192Open in IMG/M
3300031170|Ga0307498_10023946All Organisms → cellular organisms → Bacteria → Acidobacteria1429Open in IMG/M
3300031184|Ga0307499_10068173All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300031198|Ga0307500_10007179All Organisms → cellular organisms → Bacteria2293Open in IMG/M
3300031538|Ga0310888_10104873All Organisms → cellular organisms → Bacteria → Acidobacteria1444Open in IMG/M
3300031547|Ga0310887_10353873Not Available852Open in IMG/M
3300031740|Ga0307468_100539511All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300031847|Ga0310907_10069556All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300031858|Ga0310892_10562805Not Available767Open in IMG/M
3300031892|Ga0310893_10011283All Organisms → cellular organisms → Bacteria → Acidobacteria2442Open in IMG/M
3300031940|Ga0310901_10059695All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300031940|Ga0310901_10428700Not Available581Open in IMG/M
3300031943|Ga0310885_10036214All Organisms → cellular organisms → Bacteria1964Open in IMG/M
3300031943|Ga0310885_10765891Not Available546Open in IMG/M
3300032012|Ga0310902_10877365Not Available616Open in IMG/M
3300032013|Ga0310906_10058913All Organisms → cellular organisms → Bacteria1934Open in IMG/M
3300032013|Ga0310906_10337749All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium975Open in IMG/M
3300032017|Ga0310899_10321287All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium723Open in IMG/M
3300032075|Ga0310890_10461644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29957Open in IMG/M
3300032075|Ga0310890_10871336Not Available717Open in IMG/M
3300032122|Ga0310895_10081321All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300032144|Ga0315910_10016561All Organisms → cellular organisms → Bacteria → Acidobacteria5536Open in IMG/M
3300032144|Ga0315910_10231584All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1392Open in IMG/M
3300032157|Ga0315912_10007821All Organisms → cellular organisms → Bacteria → Acidobacteria9382Open in IMG/M
3300032157|Ga0315912_10716506All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium797Open in IMG/M
3300032157|Ga0315912_10758371All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300032157|Ga0315912_10804015Not Available748Open in IMG/M
3300032157|Ga0315912_11367835Not Available559Open in IMG/M
3300032179|Ga0310889_10125868All Organisms → cellular organisms → Bacteria → Acidobacteria1122Open in IMG/M
3300032179|Ga0310889_10416214Not Available669Open in IMG/M
3300032211|Ga0310896_10403489Not Available731Open in IMG/M
3300034661|Ga0314782_152366Not Available568Open in IMG/M
3300034663|Ga0314784_152031Not Available525Open in IMG/M
3300034664|Ga0314786_179659Not Available513Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil21.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere6.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.31%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.54%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.77%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.89%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.89%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300023102Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034663Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0830.000071302162886013Switchgrass RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
ICChiseqgaiiDRAFT_068623223300000033SoilMRPNEHTAIGTISDITKSLERIESGAASLSVALPLLSPGTQITAHTRNTCYQMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRMGWIVEGLQIELSTVRGPVLTSIVESLSVRQRES*
JGI10215J12807_118965023300000881SoilMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG*
JGI10216J12902_11483823813300000956SoilVYVFLAEFVPYHNAPNREAWMRPTEHTAIGTISDITKSLERLESGSGSPSVALPSLSPGTQITAHTRNTCYHMEVMDGPNRRVLISGGLLFPQGAQVEVIGATDDEGVRIGWIIEGLQIELSTVRGPVLTSIVESLLVRQREG*
F14TB_10514775313300001431SoilMPSNEHTAIGTISDITKSLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSI
Ga0055465_1011294923300004013Natural And Restored WetlandsPSNEHTAIGTISDITKNLERAKSGSPPLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGAADDEGVRVGWIIEGLQVELSTVRGPVLTSIVESLSVRQREG*
Ga0062593_10000308043300004114SoilMRPNEHTAIGTITDITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG*
Ga0062593_10194631613300004114SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0062590_10150226423300004157SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0062591_10012869113300004643SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTA
Ga0062594_10099040313300005093SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPV
Ga0062594_10178666123300005093SoilQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSRGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG*
Ga0065707_1010987713300005295Switchgrass RhizosphereMPSNEHTAIGTISDITKSLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0070676_1036189023300005328Miscanthus RhizosphereMRLNERTVIGTISDITKSLERLEPGFASPSVALPSLSPGTQITAQTRNTCYQMEVMDGPAGRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSIVESLSVRQRES*
Ga0070676_1077969523300005328Miscanthus RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLT
Ga0070690_10018980923300005330Switchgrass RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0070677_1000737633300005333Miscanthus RhizosphereMRLNERTVIGTISDITKSLERLESGFASPSVALPSLSPGTQITAQTRNTCYQMEVMDGPAGRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSIVESLSVRQRES*
Ga0068869_10023220423300005334Miscanthus RhizosphereITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG*
Ga0070668_10099819323300005347Switchgrass RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSRGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0070688_10076276713300005365Switchgrass RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTA
Ga0070659_10103993513300005366Corn RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSRGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQ
Ga0070700_10096756613300005441Corn, Switchgrass And Miscanthus RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG*
Ga0070678_10082192123300005456Miscanthus RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG*
Ga0070662_10118853013300005457Corn RhizosphereMRLNERTVIGTISDITKSLERLESGFASPSVALPSLSPGTQITAQTRNTCYQMEVMDGPAGRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSIVES
Ga0068867_10117172723300005459Miscanthus RhizosphereEAGMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0070686_10012573223300005544Switchgrass RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPLLSPGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG*
Ga0068857_10124237313300005577Corn RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESL
Ga0070702_10066849123300005615Corn, Switchgrass And Miscanthus RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0068861_10027341523300005719Switchgrass RhizosphereMQSNEHTAIGTISDVTKSLDPVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMITGGLLFPQGDEVEVIGATDDEGVRAGWIVEGLQIELSTVRGPVLTSIVESLSVREREG*
Ga0068861_10094014023300005719Switchgrass RhizosphereMRPNEHTAIGTISDITKSLERIESGAASLSVALPLLSPGTQITAHTRNTCYQMEVMDGPARRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSIVESLSVRQRES*
Ga0068861_10142665113300005719Switchgrass RhizosphereMRPNEHTAIGTITDITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLLVR
Ga0075420_10025178023300006853Populus RhizosphereMRFNEHTAIGTISNITKSLEGLEPGPGSLSVALPLLSPGTQIIAHTRNTCYQMEVMDGPARRVLISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESISVRQREG*
Ga0111539_1079938013300009094Populus RhizosphereMQSNEHTAIGTISDATKSLERAESGSTSLSVSLPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGAADDEGVRVGWIVEGLQIE
Ga0105245_1243080213300009098Miscanthus RhizosphereMPSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVL
Ga0075418_1083818823300009100Populus RhizosphereVYVFFAEFVPDQDDPFAEAWMRFNEHTAIGTISNITKSLEGLEPGPGSLSVALPLLSPGTQIIAHTRNTCYQMEVMDGPARRGLISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESISVRQREG*
Ga0105242_1165856223300009176Miscanthus RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQSEG*
Ga0134127_1173624923300010399Terrestrial SoilWMRSNQQTAIGTMSDITKSLERIESGSAALSVALPLLSAGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG*
Ga0134123_1316268613300010403Terrestrial SoilMRLNERTVIGTISDITKSLERLESGFASPSVALPSLSPGTQITAQTRNTCYQMEVMDGPAGRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSI
Ga0127502_1057723223300011333SoilPNREVWMPSNEHTAFGTISDITKSLERVESGPPSLSVALPSLSPGTHITIHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQVELSTVRGPVLTSIVESLSVRQREG*
Ga0137421_110300023300012039SoilVKVVLGVRFSGGDSFHQKKPNREAGMPSNEHTAIGTISDITKSLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0157309_1005664023300012895SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGVLLFPEGDEGEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0157283_1005361013300012907SoilISDVTKSLERVESGSPSLSVSLPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0157307_101290323300013096SoilIRSIRRRPNREAGMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG*
Ga0157374_1265929213300013296Miscanthus RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVES
Ga0132258_1303028923300015371Arabidopsis RhizosphereMQSNEHTAIGTISDATKSLERAESGSTSLSVSLPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG*
Ga0132256_10012870623300015372Arabidopsis RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPFLSPGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG*
Ga0132257_10069966723300015373Arabidopsis RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPLLSPGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG*
Ga0132255_10038646323300015374Arabidopsis RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQCEG*
Ga0132255_10219970623300015374Arabidopsis RhizosphereMQSNEHTAIGTISDATKSLERAESGSTSLSVSLPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG*
Ga0163161_1062137113300017792Switchgrass RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG
Ga0184616_1006063323300018055Groundwater SedimentMPSNEHTAIGTISDITKSLERVEAGSPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0184628_1002444533300018083Groundwater SedimentMPSNEHTAIGTISDITKNLERVGAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0184628_1020122713300018083Groundwater SedimentMRSNQQTAIGTMSDITKSLERIESGSAALSVALPLLSAGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGAEVELIGASDDEGVRVGWIVEGLQIELSTVRGPVLT
Ga0190270_1011713133300018469SoilMRSNQQTAIGTMSDITKSLERMESGSAALSVALPLLSAGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGAEVELIGASDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQSEG
Ga0190274_1217699523300018476SoilMRPNEHTAIGTISDITKSLERIESGAASLSVALPLLSPGTQITAHTRNTCYQMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRMGWIVEGLQIELSTVRGPVLTSIVESLSVRQRES
Ga0190274_1348194723300018476SoilGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0190271_1001487423300018481SoilMRSNQQTAIGTMSDITKSLERIESGSAALSVALPLLSAGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGAEVELIGASDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQSEG
Ga0190271_1003458713300018481SoilTAIGTISDITKSLERVESGSPSLSVALPSLSPGTHITVHTRNTCYHMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0190271_1061254713300018481SoilMPSNEHTAIGTISDITKSLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0173482_1003998823300019361SoilMPSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0173479_1056787523300019362SoilMPSNEHTAIGTISDITKSLERVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0247792_111560213300022880SoilMRPNEHTAIGTITDITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTS
Ga0247754_110515713300023102SoilMRPNEHTAIGTITDITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0207682_1000439353300025893Miscanthus RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG
Ga0207682_1000992433300025893Miscanthus RhizosphereMRLNERTVIGTISDITKSLERLESGFASPSVALPSLSPGTQITAQTRNTCYQMEVMDGPAGRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSIVESLSVRQRES
Ga0207688_1000663143300025901Corn, Switchgrass And Miscanthus RhizosphereMQSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0207645_1006456533300025907Miscanthus RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0207645_1065136813300025907Miscanthus RhizosphereMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVL
Ga0207643_1038670223300025908Miscanthus RhizosphereMQSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0207681_1106824923300025923Switchgrass RhizosphereMRLNERTVIGTISDITKSLERLEPGFASPSVALPSLSPGTQITAQTRNTCYQMEVMDGPAGRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSIVESLSVRQRES
Ga0207690_1048551223300025932Corn RhizosphereMQSNEHTAIGTISDVTKSLDPVESGSPSLSVALPLLSRGTHITVHTRNTCYRMEVIDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVR
Ga0207670_1125989713300025936Switchgrass RhizosphereMRPNEHTAIGTITDITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVD
Ga0207704_1141295213300025938Miscanthus RhizosphereMRSNQQTAIGTMSDITKSLERMESGSAALSVALPLLSAGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGAEVELIGASDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQ
Ga0207679_1146773713300025945Corn RhizosphereMRPNEHTAIGTITDITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSV
Ga0207676_1031786123300026095Switchgrass RhizosphereTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0207675_10055761723300026118Switchgrass RhizosphereMQSNEHTAIGTISDVTKSLDPVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMITGGLLFPQGDEVEVIGATDDEGVRAGWIVEGLQIELSTVRGPVLTSIVESLSVREREG
Ga0207428_1068589323300027907Populus RhizosphereMQSNEHTAIGTISDATKSLERAESGSTSLSVSLPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELS
Ga0268265_1012295013300028380Switchgrass RhizosphereMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQ
Ga0247828_1017725923300028587SoilMPSNEHTAIGTISDITKSLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLT
Ga0247825_1000740133300028812SoilMQSNEHTAIGTISDLTKSLERVESGSPSLSVALPSLSPGTHITVHTRNTCYHMEVMDGSARRVMISGGLLFPQGDEVEVIGAADDEGVRVGWILEGFQIELSTVRGPVLTSIVESLSVRQREG
Ga0307498_1002394623300031170SoilMQSNEHTAIGTISDVTKSLERVESGSPSLSVSLPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG
Ga0307499_1006817323300031184SoilMRPNEHTAIGTISDITKSLERIESGSALLSVALPLLSPGTQITAHTRNTCYQMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRMGWIVEGLQIELSTVRGPVLTSIVESLSVRQRES
Ga0307500_1000717933300031198SoilMRPNDHTAIGTISDITKSLERIESGSALLSVALPLLSPGTQITAHTRNTCYQMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRTGWIVEGLQIELSTVRGPVLTSIVESLSVRQRES
Ga0310888_1010487323300031538SoilMPSNEHTAIGTISDVTKSLERVESGSPSLSVSLPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0310887_1035387313300031547SoilMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0307468_10053951113300031740Hardwood Forest SoilMRPNEHTAIGTISDITKSLERIESGSASLSVALPLLLPGTQITAHTRNTCYQMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRMGWIVEGLQIELSTVRGPVLTSIVESLSVRQRES
Ga0310907_1006955613300031847SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG
Ga0310892_1056280523300031858SoilMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPV
Ga0310893_1001128333300031892SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELS
Ga0310901_1005969513300031940SoilKNLERVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0310901_1042870013300031940SoilMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIV
Ga0310885_1003621423300031943SoilMPSNEHTAIGTISDITKNLERAESGSPPLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0310885_1076589123300031943SoilRLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0310902_1087736513300032012SoilERAESGSPPLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0310906_1005891333300032013SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSPARGPVLTSIVDS
Ga0310906_1033774923300032013SoilMPSNEHTAIGTISNITKNLERAESGSPPLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0310899_1032128713300032017SoilEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPKGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQREG
Ga0310890_1046164423300032075SoilMPSNEHTAIGTISNITKNLERAESGSPPLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPHGDEVEVIGATDDEGVRVGWIVEGFQIELSTVRGPVLTSIVESLSVRQREG
Ga0310890_1087133623300032075SoilMRPNEHTAIGTITDITKSLERLESGSGSLSVSLPVLLPGTEITAHTRNTCYHMEVMDGPARRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPDLT
Ga0310895_1008132113300032122SoilVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0315910_1001656143300032144SoilMRVNERTAIGTRSDVAKSLERVEVDSGSVSVALPLLSPGTQITAHTRNTCYRMEVMDGPTRRVMISGGLLFPQGAEVEVIGATDDEGVRVGLIVQGLQIELATVRGPVLTSIVESLSVRQRES
Ga0315910_1023158423300032144SoilMRANEHTAIGTMSDVAKSLERVETGPGLISVALPLLSPGTQITAHTRNTCYRMEVMDGPSRRVMINGGLLFPQGAEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVRQRES
Ga0315912_1000782123300032157SoilMRLNEHTAIGTISDIAKSLERIDAGSGSFSVALPSLSPGTQITAHTRNTCYRMEVMDGASRRVLISGGLLFPQGAEVEVIGATDDEGVRVGWIVQGLQIELATVRGPVLTSIVESLSVRQRES
Ga0315912_1071650623300032157SoilMRLNERTVTGTISDITKSLERIESGFASPSVALPSLSPGTQITAQTRNTCYQMEVMDGPAGRVLISGGLLFPQGAEVEVIGASDDEGVKAGWIVEGLQIELATVRGPVLTSIVESLSVRERES
Ga0315912_1075837113300032157SoilMRPNEYTAIGTISDITKSLERIESGSGSLSVALPLLSPGTEITVHTRNTCYRLEVMDGSARRVMISGGLLFPQGAEVEVIGATDDEGVRVGWIVQGLQIELSTVRGPVLTSIVETLSVRQREGERDQSQH
Ga0315912_1080401513300032157SoilYHSRVRQATSDSCAASVNLRIRILLTDVKAGLGVRFSGGNSFHNKTSQIGRQGMQPNEHTAIGTISDITKSLERVESGSPSRSVALPLLSPGTQITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGLQIELSTVRGPVLTSIVESLSVCQREG
Ga0315912_1136783523300032157SoilMRANEHTAIGTMSDVAKSLERVEAGPGSISVALPLLSPGTQITAHTRNTCYRMEVMDGPARRVIISGGLLFPQGAEVEVIGATDDEGVRVGWLCEGLQIELSTVRGPVLTSIVESLSVRQRES
Ga0310889_1012586823300032179SoilMPSNEHTAIGTISDITKNLERVEAGSPSLSVALSSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDEGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0310889_1041621423300032179SoilMPSNEHTAIGTISNITKNLERAESGSPPLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPHGDEVEVIGATDDEGVRVGWIVEGLQVELSTVRGPVLTSIVESLSVRQREG
Ga0310896_1040348923300032211SoilMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPHGDEVEVIGATDDEGVRVGWIVEGLQVELSTVRGPVLTSIVESLSVRQREG
Ga0314782_152366_26_3973300034661SoilMPSNEHTAIGTISDITKSLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0314784_152031_37_4083300034663SoilMPSNEHTAIGTISDIMKNLERVEAGSPSLSVALPSLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPQGDEVEVIGATDDDGVRVGWIVEGFQIELSTARGPVLTSIVESLSVRQREG
Ga0314786_179659_33_4043300034664SoilMQSNEHTAIGTISDVTKSLERVESGSPSLSVALPLLSPGTHITVHTRNTCYRMEVMDGSARRVMISGGLLFPHGDEVEVIGATDDEGVRVGWIVEGLQVELSTARGPVLKSIVESLSVRQREG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.