Metagenome Family F083390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083390
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	43 residues
Representative Sequence	MKHAAQLFPIALQELIEIGEKGMKQREQRERAKHVARPRETRA
Number of Associated Samples	80
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.19 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.292 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (30.088 % of family members)
Environment Ontology (ENVO)	Unclassified (91.150 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.460 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.89% β-sheet: 0.00% Coil/Unstructured: 52.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04002	RadC	2.65
PF09304	Cortex-I_coil	1.77
PF14279	HNH_5	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	2.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
All Organisms	root	All Organisms	40.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
cellular organisms	root	All Organisms → cellular organisms	33.63 %
Viruses	superkingdom	All Organisms → Viruses	7.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	16.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.65 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.65 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.88 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	16.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.65 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.65 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.88 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.54 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.65 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.65 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.65 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	3.54 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2.65 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.65 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.65 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	3.54 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	2.65 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.65 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	2.65 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	3.54 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.65 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.65 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	2.65 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	3.54 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	2.65 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.65 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	2.65 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.29 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	3.54 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2.65 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.65 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	2.65 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10030496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	2972	Open in IMG/M
3300000101\|DelMOSum2010_c10067958	All Organisms → Viruses → Predicted Viral	1661	Open in IMG/M
3300000115\|DelMOSum2011_c10144652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	713	Open in IMG/M
3300000117\|DelMOWin2010_c10050220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1847	Open in IMG/M
3300000117\|DelMOWin2010_c10056107	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300001450\|JGI24006J15134_10039890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1993	Open in IMG/M
3300001460\|JGI24003J15210_10059999	Not Available	1228	Open in IMG/M
3300001460\|JGI24003J15210_10061375	Not Available	1208	Open in IMG/M
3300001460\|JGI24003J15210_10181918	Not Available	508	Open in IMG/M
3300001472\|JGI24004J15324_10048307	Not Available	1279	Open in IMG/M
3300001472\|JGI24004J15324_10059939	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300001472\|JGI24004J15324_10076076	Not Available	921	Open in IMG/M
3300001472\|JGI24004J15324_10119718	Not Available	647	Open in IMG/M
3300001472\|JGI24004J15324_10133465	Not Available	593	Open in IMG/M
3300004461\|Ga0066223_1003313	Not Available	815	Open in IMG/M
3300006737\|Ga0098037_1079093	Not Available	1156	Open in IMG/M
3300006752\|Ga0098048_1017170	All Organisms → cellular organisms → Bacteria	2461	Open in IMG/M
3300006789\|Ga0098054_1105204	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1055	Open in IMG/M
3300006793\|Ga0098055_1125577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	995	Open in IMG/M
3300006803\|Ga0075467_10108474	Not Available	1644	Open in IMG/M
3300006803\|Ga0075467_10275652	Not Available	903	Open in IMG/M
3300006803\|Ga0075467_10575628	Not Available	576	Open in IMG/M
3300006810\|Ga0070754_10054731	Not Available	2093	Open in IMG/M
3300006810\|Ga0070754_10291272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	735	Open in IMG/M
3300006874\|Ga0075475_10302273	Not Available	660	Open in IMG/M
3300006916\|Ga0070750_10287166	Not Available	706	Open in IMG/M
3300006919\|Ga0070746_10428933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	589	Open in IMG/M
3300006922\|Ga0098045_1119947	Not Available	614	Open in IMG/M
3300006924\|Ga0098051_1124383	Not Available	687	Open in IMG/M
3300006925\|Ga0098050_1016137	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300007229\|Ga0075468_10047534	All Organisms → Viruses → Predicted Viral	1469	Open in IMG/M
3300007276\|Ga0070747_1057814	All Organisms → Viruses → Predicted Viral	1475	Open in IMG/M
3300007276\|Ga0070747_1096249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1095	Open in IMG/M
3300007345\|Ga0070752_1045481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	2043	Open in IMG/M
3300007346\|Ga0070753_1304909	Not Available	568	Open in IMG/M
3300009024\|Ga0102811_1418783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	508	Open in IMG/M
3300009050\|Ga0102909_1133835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	597	Open in IMG/M
3300009074\|Ga0115549_1225204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	596	Open in IMG/M
3300009079\|Ga0102814_10251643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	961	Open in IMG/M
3300009433\|Ga0115545_1158460	Not Available	787	Open in IMG/M
3300009435\|Ga0115546_1164432	Not Available	778	Open in IMG/M
3300009435\|Ga0115546_1294585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	553	Open in IMG/M
3300011252\|Ga0151674_1003479	Not Available	557	Open in IMG/M
3300011258\|Ga0151677_1055116	All Organisms → Viruses → Predicted Viral	1380	Open in IMG/M
3300013010\|Ga0129327_10840378	Not Available	524	Open in IMG/M
3300017697\|Ga0180120_10417967	Not Available	525	Open in IMG/M
3300017710\|Ga0181403_1111703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	571	Open in IMG/M
3300017713\|Ga0181391_1078390	Not Available	757	Open in IMG/M
3300017717\|Ga0181404_1062192	Not Available	932	Open in IMG/M
3300017717\|Ga0181404_1127904	Not Available	618	Open in IMG/M
3300017719\|Ga0181390_1097887	Not Available	788	Open in IMG/M
3300017720\|Ga0181383_1116118	Not Available	718	Open in IMG/M
3300017726\|Ga0181381_1026842	Not Available	1300	Open in IMG/M
3300017726\|Ga0181381_1089292	Not Available	656	Open in IMG/M
3300017726\|Ga0181381_1125188	Not Available	537	Open in IMG/M
3300017734\|Ga0187222_1124444	Not Available	577	Open in IMG/M
3300017734\|Ga0187222_1153924	Not Available	511	Open in IMG/M
3300017748\|Ga0181393_1070015	Not Available	932	Open in IMG/M
3300017750\|Ga0181405_1176291	Not Available	522	Open in IMG/M
3300017750\|Ga0181405_1187965	Not Available	503	Open in IMG/M
3300017755\|Ga0181411_1020054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2170	Open in IMG/M
3300017756\|Ga0181382_1030672	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1628	Open in IMG/M
3300017756\|Ga0181382_1118780	Not Available	705	Open in IMG/M
3300017757\|Ga0181420_1072325	Not Available	1083	Open in IMG/M
3300017765\|Ga0181413_1253304	Not Available	518	Open in IMG/M
3300017768\|Ga0187220_1214402	Not Available	579	Open in IMG/M
3300017768\|Ga0187220_1217198	Not Available	574	Open in IMG/M
3300017771\|Ga0181425_1229712	Not Available	577	Open in IMG/M
3300017779\|Ga0181395_1069538	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1144	Open in IMG/M
3300017779\|Ga0181395_1206219	Not Available	609	Open in IMG/M
3300017782\|Ga0181380_1205397	Not Available	660	Open in IMG/M
3300017783\|Ga0181379_1053519	Not Available	1541	Open in IMG/M
3300017786\|Ga0181424_10305337	Not Available	660	Open in IMG/M
3300018416\|Ga0181553_10136269	Not Available	1476	Open in IMG/M
3300020165\|Ga0206125_10078455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1466	Open in IMG/M
3300022072\|Ga0196889_1101460	Not Available	524	Open in IMG/M
3300022074\|Ga0224906_1125761	Not Available	738	Open in IMG/M
3300022178\|Ga0196887_1020119	Not Available	1987	Open in IMG/M
3300022178\|Ga0196887_1024955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1729	Open in IMG/M
3300022183\|Ga0196891_1049942	Not Available	761	Open in IMG/M
3300022187\|Ga0196899_1077193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1026	Open in IMG/M
3300022187\|Ga0196899_1130516	Not Available	715	Open in IMG/M
3300025048\|Ga0207905_1007242	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2023	Open in IMG/M
3300025070\|Ga0208667_1008658	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300025070\|Ga0208667_1059794	Not Available	596	Open in IMG/M
3300025070\|Ga0208667_1060328	Not Available	593	Open in IMG/M
3300025083\|Ga0208791_1038162	Not Available	878	Open in IMG/M
3300025083\|Ga0208791_1042358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	818	Open in IMG/M
3300025083\|Ga0208791_1068352	Not Available	591	Open in IMG/M
3300025084\|Ga0208298_1009657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2418	Open in IMG/M
3300025084\|Ga0208298_1055230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	770	Open in IMG/M
3300025085\|Ga0208792_1009632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2230	Open in IMG/M
3300025085\|Ga0208792_1046604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	821	Open in IMG/M
3300025098\|Ga0208434_1014020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2124	Open in IMG/M
3300025103\|Ga0208013_1091202	Not Available	777	Open in IMG/M
3300025120\|Ga0209535_1050036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1789	Open in IMG/M
3300025120\|Ga0209535_1143798	Not Available	765	Open in IMG/M
3300025120\|Ga0209535_1210666	Not Available	534	Open in IMG/M
3300025128\|Ga0208919_1074995	All Organisms → Viruses → Predicted Viral	1117	Open in IMG/M
3300025137\|Ga0209336_10114309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	747	Open in IMG/M
3300025508\|Ga0208148_1116157	Not Available	557	Open in IMG/M
3300025543\|Ga0208303_1128272	Not Available	503	Open in IMG/M
3300025630\|Ga0208004_1145472	Not Available	517	Open in IMG/M
3300025645\|Ga0208643_1043732	Not Available	1408	Open in IMG/M
3300025652\|Ga0208134_1043315	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1479	Open in IMG/M
3300025652\|Ga0208134_1137263	Not Available	631	Open in IMG/M
3300025751\|Ga0208150_1074686	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300025806\|Ga0208545_1163666	Not Available	521	Open in IMG/M
3300025853\|Ga0208645_1188935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	741	Open in IMG/M
3300031519\|Ga0307488_10104414	All Organisms → Viruses → Predicted Viral	2060	Open in IMG/M
3300031519\|Ga0307488_10789385	Not Available	527	Open in IMG/M
3300032254\|Ga0316208_1080911	Not Available	857	Open in IMG/M
3300034375\|Ga0348336_149303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	32.74%
Oceanic	Environmental → Aquatic → Marine → Oceanic	30.09%
Strait	Environmental → Aquatic → Marine → Strait	24.78%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.42%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.42%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	31.86%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	30.09%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	24.78%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.42%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.65%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.89%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	30.09%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	25.66%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	24.78%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	4.42%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.54%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.65%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.77%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.77%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.77%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.89%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.89%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.89%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009050	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300032254	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month chalcopyrite	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100304969	3300000101	Marine	MKHATQLFPIAVSRLIEIGEKARKQREDRERAKHVARP
DelMOSum2010_100679581	3300000101	Marine	LKHATQLFPIALQELIAIGEKGMKQREKGELAKRVARPRETRA
DelMOSum2011_101446524	3300000115	Marine	MTHHATQLFPIALDRLLEIGEKARKQREQRERAGHVARPRETR
DelMOWin2010_100502201	3300000117	Marine	MKHAKQLFPIALQELLEIGEKARKQREQRERAERV
DelMOWin2010_100561076	3300000117	Marine	MNHAAKLFPIALDRLLEIGEKARKQREQRERAKHVARPRETRACKHA
JGI24006J15134_100398901	3300001450	Marine	MEGETSMTHHATQLFPIALQELIEIGEKGMKQREDRER
JGI24003J15210_100599996	3300001460	Marine	MKHHASQLFPIALDRLIAIGEKGKKQREDRERAKRGALPRETGACMHAA
JGI24003J15210_100613755	3300001460	Marine	MTHHAEQLFPIAVSRLIEIGEKARKQREDRERAKRGALPRETGACMQAAC
JGI24003J15210_101819182	3300001460	Marine	MNHATQLFPIALDRLIEIGEKGMKQKEQRERAERGARPRETRACKQVA
JGI24004J15324_100483074	3300001472	Marine	MKHATQLFPIAVSRLLEIGEKARKQREDGERAGRVARPRETRACM
JGI24004J15324_100599391	3300001472	Marine	MTHHAEQLFPIALQELIEIGEKARKQREDRERAKHVALPRET
JGI24004J15324_100760764	3300001472	Marine	MKHATKLFPIALQELLEIGEKARKQREQGERAKRGALPRETGACMHAAC
JGI24004J15324_101197181	3300001472	Marine	MKHATKLFPIAVSRLIEIGEKGMKQREDRERAERGALPRETGACKHV
JGI24004J15324_101334651	3300001472	Marine	MKHHAEQLFPIALQELIEIGEKARKQREDRERAKHVAL
Ga0066223_10033134	3300004461	Marine	MKHHAKQLFPIALQELIAIGEKARKQREQRERAGHVARPRET
Ga0098037_10790935	3300006737	Marine	MKHATQLFPIALQELLEIGEKGIKQREQRERAKHEARPRETRACKHGARG
Ga0098048_10171701	3300006752	Marine	MNHASQLFPIALQELIEIGEKGMKQREQRERAKRVARPRET
Ga0098054_11052044	3300006789	Marine	MKHASQLFPIALQELLEIGEKARKQREQRERAEHVARPRGARACMHAAR
Ga0098055_11255775	3300006793	Marine	MKHAKQLFPIALQELIEIGEKGKKQREQRERAGHV
Ga0075467_101084741	3300006803	Aqueous	MNHATQLFPIALDRLIEIGEKGMKQREDRERAGHVARPRETGACMH
Ga0075467_102756525	3300006803	Aqueous	MKHAKQLFPIALQELIEIGEKARKQREDRERAKRGALPRETGACMHA
Ga0075467_105756283	3300006803	Aqueous	MNHASQLFPIALDRLLEIGEKARKQREDRERAGRVALPRKPGACMH
Ga0070754_100547311	3300006810	Aqueous	MKHASQLFPIALDRLLEIGEKARKQREDRERAGRVALPRKPGACMHAA
Ga0070754_102912721	3300006810	Aqueous	MTHHAAQLFPIALDRLIEIGEKGMKQREQGERAGRVARPRETRACMQV
Ga0075475_103022734	3300006874	Aqueous	MTHHAAKLFPIALDRLLAIGEKGMKQREQRERAKHVARPRETRAC
Ga0070750_102871664	3300006916	Aqueous	MKHAKQLFPIALQELIEIGEKARKQREQRERAKHV
Ga0070746_104289331	3300006919	Aqueous	MNHHATQLFPIALDRLLEIGEKARKQREQKELAKHVARPR
Ga0098045_11199473	3300006922	Marine	MKHASEMFPEALKQLLEIGEKGMKQREQRERAKQASKASFTRAC
Ga0098051_11243831	3300006924	Marine	MKHAAQLFPIALQELIEIGEKGMKQREQRERAKHVARPRETRA
Ga0098050_10161376	3300006925	Marine	MNHASQLFPIALQELIEIGEKGMKQREQRERAKRVARPRETRA
Ga0075468_100475341	3300007229	Aqueous	MKHHATKLFPIALQELIAIGEKGMKQREQGERAKRGARPRET
Ga0070747_10578141	3300007276	Aqueous	MKHHATKLFPIALQELIAIGEKGMKQREQGERAKRGARPRETR
Ga0070747_10962494	3300007276	Aqueous	MKHHATQLFPIALQELIAIGEKGMKQREQGERAKRGARPRE
Ga0070752_10454811	3300007345	Aqueous	MNHHATKLFPIALQELIAIGEKGMKQREQGERAKRGARPRETR
Ga0070753_13049093	3300007346	Aqueous	MKHATQLFPIALDRLIAIGEKARKQREQRERAGHGA
Ga0102811_14187832	3300009024	Estuarine	MNHAAKLFSIALQELIEIGEKARKQREDRERAKRVARPRETRACKQVA
Ga0102909_11338353	3300009050	Estuarine	LNHAAKLFPIALQELIEIGEKGMKQREDRERAKRGARPRETRACMQV
Ga0115549_12252043	3300009074	Pelagic Marine	MTHHATKLFPIALQELIEIGEKARKQREQGERAGHVARPRE
Ga0102814_102516434	3300009079	Estuarine	MNHAAKLFPIALQELIEIGEKARKQREDRERAKRVARPRETRACKHVAC
Ga0115545_11584601	3300009433	Pelagic Marine	LFPIALSRLLEIGEKGMKQREDRERAKHVARPRETRVCMHAMHEEKQA*
Ga0115546_11644321	3300009435	Pelagic Marine	MKHASEIFPEALKQLLEIGEKGMKQREERERAKHVARPR
Ga0115546_12945851	3300009435	Pelagic Marine	LKHASQLFPIALDRLLEIGEKARKQREDRERAKHVARPRETRACMHV
Ga0151674_10034793	3300011252	Marine	MTHHASQLFPIAVSRLIEIGEKAREQREREKRGARPRETRA
Ga0151677_10551165	3300011258	Marine	MTHHAKQLFPIALDRLLEIGEKARKQREDGERAGRVARPRETRACKHGARGQSFT
Ga0129327_108403781	3300013010	Freshwater To Marine Saline Gradient	MKHAKQLFPIALQELIEIGEKARKQREDRERAKRG
Ga0180120_104179671	3300017697	Freshwater To Marine Saline Gradient	MKHAKQLFPIALDRLLEIGEKGMKQREDRERARRGARPRETRACMHVACKQSF
Ga0181403_11117031	3300017710	Seawater	MNHAEQLFPIALQELIAIGEKARKQREDRERAKRAALPRKPGAC
Ga0181391_10783903	3300017713	Seawater	MKHANEIFPEALKQLLEIGEKARKQREDRERAKRVALPRKPGACMQVAF
Ga0181404_10621921	3300017717	Seawater	MTHHASQLFPIALQELIEIGEKARKQREDRERAKHVARPRETR
Ga0181404_11279043	3300017717	Seawater	MKHAKQLFPIALQELLEIGEKARKQRDRAKQVARPRETR
Ga0181390_10978874	3300017719	Seawater	MKHAAQLFPIAVSRLIEIGEKARKQREDRERAERGALPRETGACMHAACKQTF
Ga0181383_11161184	3300017720	Seawater	MTHHAAKLFPIALDRLIAIGEKGMKQREKGELAKR
Ga0181381_10268426	3300017726	Seawater	MTHHAEQLFPIAVSRLIEIGEKGKKQREDRERAKRGALPRETGA
Ga0181381_10892923	3300017726	Seawater	MKHAAKLFPIALQELLEIGEKARKQREQRERAGHVA
Ga0181381_11251882	3300017726	Seawater	MNHATKLFPIALQELLEIGEKARKQREQRERAGHVA
Ga0187222_11244442	3300017734	Seawater	MKHAEKLFPIAVSRLIEIGEKARKQREQRERAKQASKASFTRACKHAMHEEKQA
Ga0187222_11539242	3300017734	Seawater	MKHANEIFPEALKQLLEIGEKARKQREQRERAKHVARPRGA
Ga0181393_10700151	3300017748	Seawater	MKHHATKLFPIALQELIAIGEKARKQREKGERAKRGARPRET
Ga0181405_11762913	3300017750	Seawater	MTHHASQLFPIALQELLEIGEKGMKQREDRERAKQASTASFTRAC
Ga0181405_11879653	3300017750	Seawater	MTHHATQLFPIALDRLIEIGEKARKQREQRERAGHVAR
Ga0181411_10200545	3300017755	Seawater	MNHAEQLFPIALQELIAIGEKARKQREDRERAKRAALPRKPGA
Ga0181382_10306721	3300017756	Seawater	MKHHAKQLFPIALDRLLEIGDKARKQREQRERAGRGALPR
Ga0181382_11187804	3300017756	Seawater	MTHHAAKLFPIALDRLIAIGEKGMKQREKGELAKRGARLRETRAC
Ga0181420_10723251	3300017757	Seawater	MKHATQLFPIAVQELIEIGEKGMKQREDRERAKRGALPRETGA
Ga0181413_12533043	3300017765	Seawater	MTHHAAKLFSIALQELIEIGEKARKQREQRERAKHV
Ga0187220_12144021	3300017768	Seawater	MKHHAKQLFPIALDRLLEIGEKARKQREDKERAKHVARPRETRACMHGA
Ga0187220_12171983	3300017768	Seawater	MTHHATKLFPIAVQELIAIGEKARKQREDRDRAKHVARPRETRACMHAGKE
Ga0181425_12297122	3300017771	Seawater	MKHASQLFPIALQELIEIGEKARKQREDRERAKHGARPRETRACK
Ga0181395_10695383	3300017779	Seawater	MKHATQLFPIALQELIAIGEKGKKQREDRERAERGALPRETGACKQAARKE
Ga0181395_12062193	3300017779	Seawater	MTHHAEQLFPIALQELIAIGEKARKQREQRERAKQVARPRETRACMQ
Ga0181380_12053973	3300017782	Seawater	MKHASQLFPIALDRLLEIGEKARKQREQRERAEHGARH
Ga0181379_10535192	3300017783	Seawater	MKHAKQLFPIALDRLLEIGEKARKQREDRERAKHVARPRETRACMHAWCK
Ga0181424_103053374	3300017786	Seawater	MNHAAQLFPIALQELIEIGEKARKQREDRERAGHGARPRETRACMHAC
Ga0181553_101362691	3300018416	Salt Marsh	MKHAKQLFPIALQELLEIGEKARKQREQRERAEHVARPRG
Ga0206125_100784555	3300020165	Seawater	MKHATQLFPIALDRLLAIGEKGMKQREKRERAGRVARPRETRA
Ga0196889_11014601	3300022072	Aqueous	MTHHATQLFPIALQELIEIGEKGMKQREDRERAKQ
Ga0224906_11257611	3300022074	Seawater	MKHHAAQLFPIALDRLIEIGEKARKQREDRERAKRGALPRETGACMHAARK
Ga0196887_10201195	3300022178	Aqueous	MTHHAKQLFPIALQELIEIGEKARKQREGRERAKHVARPRETRAC
Ga0196887_10249554	3300022178	Aqueous	MNHHATKLFPIALQELIAIGEKGMKQREQGERAKRGARPRETRA
Ga0196891_10499421	3300022183	Aqueous	MKHAKQLFPIALQELLEIGEKARKQREDRERAGHVARPRETRACMH
Ga0196899_10771934	3300022187	Aqueous	MNHAAKLFPIALDRLLAIGEKARKQREQRERAGRVARPRETR
Ga0196899_11305163	3300022187	Aqueous	MNHATQLFPIALQELIAIGEKGMKQREKGELAKRVARPRET
Ga0207905_10072426	3300025048	Marine	MKHHAAKLFPIALQELIEIGEKARKQREKEGRALQDAWPREAR
Ga0208667_10086587	3300025070	Marine	MNHASQLFPIALQELIEIGEKGMKQREQRERAKRVARPRETRAC
Ga0208667_10597941	3300025070	Marine	MKHASQLFPIALQELLEIGEKARKQREQRERAKHVARPREARACMHA
Ga0208667_10603281	3300025070	Marine	MTHHASQLFPIALQELLEIGDKGMKQREQRERAKHEARP
Ga0208791_10381621	3300025083	Marine	MKHASEMFPEALKQLIEIGDKARKQREQRERAGHV
Ga0208791_10423581	3300025083	Marine	MTHHAAQLFPIALQELLEIGEKGMKQREKRERAKHVARPRE
Ga0208791_10683522	3300025083	Marine	MKHAKQLFPIALQELIEIGEKGKKQREQRERAGHVALPRKPGACMHAA
Ga0208298_10096571	3300025084	Marine	MKHAAQLFPIALQELLEIGEKGMKQREKRERAKHVARPRETRAC
Ga0208298_10552301	3300025084	Marine	MTHHAAQLFPIALQELLEIGEKGMKQREKRERAKHVARPRETRAC
Ga0208792_10096326	3300025085	Marine	MKHAKQLFPIALDRLLEIGEKGKKQREQRERAGHVAL
Ga0208792_10466041	3300025085	Marine	MNHAAQLFPIALDRLLEIGEKGKKQREQRERAGHVALPR
Ga0208434_10140201	3300025098	Marine	MKHAAQLFPIALQELLEIGEKGMKQREKRERAKHVARPRETRA
Ga0208013_10912023	3300025103	Marine	MKHASQLFPIALQELIEIGEKGMKQREQRERAKHEARPRETRACKHGARGQSF
Ga0209535_10500361	3300025120	Marine	MTHHATQLFPIALDRLIEIGEKARKQREDRERAGQVARPRETRACMHAACKE
Ga0209535_11437984	3300025120	Marine	MTHHATQLFPIALQELIEIGEKGMKQREDRERAKRGALPRETGAC
Ga0209535_12106662	3300025120	Marine	MTHHAKQLFPIALQELLEIGEKGMKQREQRERAKRGALPRE
Ga0208919_10749951	3300025128	Marine	MKHATQLFPIALQELLEIGEKGKKQREQRERAEHVARPRETRACMHGAR
Ga0209336_101143094	3300025137	Marine	MKHAAKLFPIALDRLLEIGEKARKQREDRERAKRAALPRKPGACMHA
Ga0208148_11161573	3300025508	Aqueous	MNHATQLFPIALDRLIEIGEKARKQRERAKHGARPRETRACMHVAC
Ga0208303_11282721	3300025543	Aqueous	MKHASQLFPIALDRLIEIGEKARKQRERAKHGARPRETRAC
Ga0208004_11454722	3300025630	Aqueous	MKHAKQLFPIALQELIEIGEKARKQRQDKERAMRVALPRKPGACMHA
Ga0208643_10437321	3300025645	Aqueous	MKHAKQLFPIALQELIEIGEKARKQREDRERAKRGALPRKPGACMHAMH
Ga0208134_10433151	3300025652	Aqueous	MNHATKLFPIALQELIAIGEKGMKQREQGERAKRGARPRETRA
Ga0208134_11372631	3300025652	Aqueous	MKHAKQLFPIALQELIEIGEKARKQREQRKRAGRVALPRETGACMHAA
Ga0208150_10746861	3300025751	Aqueous	MKHAKQLFPIALQELLEIGEKARKQREQRERAKRVARPRETRACMHVAC
Ga0208545_11636661	3300025806	Aqueous	MKHAKQLFPIAVSRLIEIGEKARKQREQRERAKRGALPRKPG
Ga0208645_11889354	3300025853	Aqueous	MTHHAAQLFPIALDRLIEIGEKGMKQREDRERAKHVARPRETRACMH
Ga0307488_101044141	3300031519	Sackhole Brine	MNHAAKLFPIALQELIAIGEKARKQREKGERAKRGALPRETGAC
Ga0307488_107893852	3300031519	Sackhole Brine	MKHHATQLFPIALQELIEIGDKGMKQREHRERAKQAS
Ga0316208_10809111	3300032254	Microbial Mat	MKHASQLFPIALQELLEIGEKARKQREDRERAKHVA
Ga0348336_149303_549_698	3300034375	Aqueous	MKHAAKLFPIAVSRLIEIGEKGIKQREDRERAKRVALPRKPGACMHAACR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083390

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences