NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F083385

Metagenome Family F083385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083385
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 57 residues
Representative Sequence MSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQ
Number of Associated Samples 72
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 98.23 %
% of genes near scaffold ends (potentially truncated) 98.23 %
% of genes from short scaffolds (< 2000 bps) 93.81 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.372 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(40.708 % of family members)
Environment Ontology (ENVO) Unclassified
(93.805 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.575 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 29.09%    Coil/Unstructured: 70.91%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00386C1q 8.85
PF09636XkdW 5.31
PF16778Phage_tail_APC 5.31



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.37 %
All OrganismsrootAll Organisms32.74 %
unclassified Hyphomonasno rankunclassified Hyphomonas0.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10006990Not Available6107Open in IMG/M
3300000117|DelMOWin2010_c10055550All Organisms → Viruses → environmental samples → uncultured Mediterranean phage1706Open in IMG/M
3300000117|DelMOWin2010_c10099480Not Available1070Open in IMG/M
3300000117|DelMOWin2010_c10112941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium967Open in IMG/M
3300000117|DelMOWin2010_c10125437Not Available889Open in IMG/M
3300001355|JGI20158J14315_10120942Not Available852Open in IMG/M
3300001450|JGI24006J15134_10053633All Organisms → Viruses → environmental samples → uncultured virus1631Open in IMG/M
3300001450|JGI24006J15134_10102876Not Available1022Open in IMG/M
3300001460|JGI24003J15210_10082698Not Available966Open in IMG/M
3300001460|JGI24003J15210_10175798Not Available523Open in IMG/M
3300001472|JGI24004J15324_10050053Not Available1249Open in IMG/M
3300001472|JGI24004J15324_10070299Not Available977Open in IMG/M
3300001472|JGI24004J15324_10070309All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300001472|JGI24004J15324_10107143Not Available707Open in IMG/M
3300001963|GOS2229_1028734Not Available1769Open in IMG/M
3300003474|NAP4_1125345Not Available542Open in IMG/M
3300006027|Ga0075462_10046145All Organisms → Viruses → environmental samples → uncultured virus1389Open in IMG/M
3300006735|Ga0098038_1076014All Organisms → Viruses → environmental samples → uncultured Mediterranean phage1182Open in IMG/M
3300006752|Ga0098048_1052276Not Available1281Open in IMG/M
3300006789|Ga0098054_1156853Not Available839Open in IMG/M
3300006810|Ga0070754_10146229All Organisms → Viruses → Predicted Viral1133Open in IMG/M
3300006810|Ga0070754_10161840Not Available1063Open in IMG/M
3300006810|Ga0070754_10175744All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300006810|Ga0070754_10185858Not Available976Open in IMG/M
3300006810|Ga0070754_10198386Not Available936Open in IMG/M
3300006810|Ga0070754_10225815All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon864Open in IMG/M
3300006869|Ga0075477_10108746Not Available1181Open in IMG/M
3300006916|Ga0070750_10105865Not Available1300Open in IMG/M
3300006916|Ga0070750_10117893All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1220Open in IMG/M
3300006916|Ga0070750_10163950All Organisms → Viruses → Predicted Viral1000Open in IMG/M
3300006916|Ga0070750_10167868Not Available986Open in IMG/M
3300006916|Ga0070750_10205058All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae871Open in IMG/M
3300006919|Ga0070746_10126715Not Available1257Open in IMG/M
3300006919|Ga0070746_10168505Not Available1058Open in IMG/M
3300006919|Ga0070746_10194975Not Available967Open in IMG/M
3300006919|Ga0070746_10218311All Organisms → Viruses → environmental samples → uncultured virus901Open in IMG/M
3300006919|Ga0070746_10225363All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae884Open in IMG/M
3300006920|Ga0070748_1132665All Organisms → Viruses → environmental samples → uncultured virus933Open in IMG/M
3300006922|Ga0098045_1013817Not Available2238Open in IMG/M
3300007344|Ga0070745_1085484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.1249Open in IMG/M
3300007344|Ga0070745_1100073All Organisms → Viruses → Predicted Viral1134Open in IMG/M
3300007640|Ga0070751_1066128Not Available1547Open in IMG/M
3300007640|Ga0070751_1173266All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon851Open in IMG/M
3300008012|Ga0075480_10227455unclassified Hyphomonas → Hyphomonas sp.974Open in IMG/M
3300009071|Ga0115566_10829543All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04508Open in IMG/M
3300009433|Ga0115545_1292255All Organisms → Viruses → environmental samples → uncultured virus542Open in IMG/M
3300009435|Ga0115546_1036994All Organisms → Viruses → Predicted Viral1945Open in IMG/M
3300010148|Ga0098043_1216613Not Available527Open in IMG/M
3300010151|Ga0098061_1226777Not Available656Open in IMG/M
3300017727|Ga0181401_1057231Not Available1053Open in IMG/M
3300017729|Ga0181396_1039236Not Available942Open in IMG/M
3300017742|Ga0181399_1051870Not Available1070Open in IMG/M
3300017744|Ga0181397_1076058Not Available900Open in IMG/M
3300017750|Ga0181405_1048963Not Available1116Open in IMG/M
3300017755|Ga0181411_1052232All Organisms → Viruses → Predicted Viral1258Open in IMG/M
3300017755|Ga0181411_1080070Not Available979Open in IMG/M
3300017757|Ga0181420_1033610All Organisms → Viruses → environmental samples → uncultured virus1678Open in IMG/M
3300017758|Ga0181409_1079686Not Available987Open in IMG/M
3300017760|Ga0181408_1067697Not Available942Open in IMG/M
3300017763|Ga0181410_1092705Not Available881Open in IMG/M
3300017764|Ga0181385_1259529Not Available520Open in IMG/M
3300017767|Ga0181406_1085856Not Available957Open in IMG/M
3300017768|Ga0187220_1074653Not Available1022Open in IMG/M
3300017776|Ga0181394_1071083All Organisms → Viruses → Predicted Viral1143Open in IMG/M
3300017776|Ga0181394_1140451All Organisms → Viruses → environmental samples → uncultured virus754Open in IMG/M
3300017782|Ga0181380_1141415All Organisms → Viruses → environmental samples → uncultured virus822Open in IMG/M
3300020174|Ga0181603_10170928Not Available924Open in IMG/M
3300020388|Ga0211678_10031644Not Available2615Open in IMG/M
3300020388|Ga0211678_10177270Not Available903Open in IMG/M
3300021957|Ga0222717_10059164Not Available2465Open in IMG/M
3300021958|Ga0222718_10076811Not Available2024Open in IMG/M
3300021958|Ga0222718_10498143Not Available589Open in IMG/M
3300021959|Ga0222716_10345134All Organisms → Viruses → environmental samples → uncultured virus883Open in IMG/M
3300021964|Ga0222719_10253119Not Available1169Open in IMG/M
3300022068|Ga0212021_1136390Not Available501Open in IMG/M
3300022074|Ga0224906_1074900Not Available1034Open in IMG/M
3300022167|Ga0212020_1087958Not Available520Open in IMG/M
3300022178|Ga0196887_1050807Not Available1057Open in IMG/M
3300022183|Ga0196891_1054651Not Available722Open in IMG/M
3300025120|Ga0209535_1077921Not Available1271Open in IMG/M
3300025120|Ga0209535_1095546Not Available1079Open in IMG/M
3300025120|Ga0209535_1096757Not Available1068Open in IMG/M
3300025120|Ga0209535_1159170Not Available698Open in IMG/M
3300025120|Ga0209535_1219474Not Available513Open in IMG/M
3300025137|Ga0209336_10043565All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium1429Open in IMG/M
3300025137|Ga0209336_10057933Not Available1181Open in IMG/M
3300025137|Ga0209336_10079756Not Available957Open in IMG/M
3300025137|Ga0209336_10085049Not Available916Open in IMG/M
3300025137|Ga0209336_10086516All Organisms → Viruses → environmental samples → uncultured virus906Open in IMG/M
3300025151|Ga0209645_1116824Not Available850Open in IMG/M
3300025168|Ga0209337_1028982All Organisms → Viruses → Predicted Viral3099Open in IMG/M
3300025508|Ga0208148_1021915All Organisms → Viruses → environmental samples → uncultured virus1806Open in IMG/M
3300025508|Ga0208148_1023825Not Available1711Open in IMG/M
3300025632|Ga0209194_1024890Not Available1975Open in IMG/M
3300025645|Ga0208643_1059112All Organisms → Viruses → Predicted Viral1149Open in IMG/M
3300025645|Ga0208643_1082330All Organisms → Viruses → environmental samples → uncultured virus915Open in IMG/M
3300025652|Ga0208134_1082422All Organisms → Viruses → environmental samples → uncultured virus927Open in IMG/M
3300025759|Ga0208899_1115378Not Available975Open in IMG/M
3300025769|Ga0208767_1096446Not Available1196Open in IMG/M
3300025769|Ga0208767_1101230Not Available1153Open in IMG/M
3300025769|Ga0208767_1203569Not Available662Open in IMG/M
3300025771|Ga0208427_1087140Not Available1095Open in IMG/M
3300025803|Ga0208425_1044535Not Available1119Open in IMG/M
3300025822|Ga0209714_1175746Not Available527Open in IMG/M
3300025853|Ga0208645_1131110All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300025889|Ga0208644_1091889Not Available1518Open in IMG/M
3300025889|Ga0208644_1129324Not Available1191Open in IMG/M
3300025890|Ga0209631_10147162Not Available1276Open in IMG/M
(restricted) 3300027861|Ga0233415_10313345Not Available742Open in IMG/M
3300034374|Ga0348335_020832All Organisms → Viruses → Predicted Viral3158Open in IMG/M
3300034374|Ga0348335_098291Not Available929Open in IMG/M
3300034375|Ga0348336_095631All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300034418|Ga0348337_051653Not Available1646Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous40.71%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine23.01%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater15.93%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.42%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine4.42%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine4.42%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.77%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.77%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.89%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.89%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.89%
EstuarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300003474Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025822Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1000699083300000116MarineMSYIGRGIDQIDNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQ
DelMOWin2010_1005555013300000117MarineMYIGRNIDSINNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYT
DelMOWin2010_1009948043300000117MarineMSSSYIGRSVDAIDNISSLDVLTFNGSSTTFNLTQNSVAFVPVSADALQIQ
DelMOWin2010_1011294113300000117MarineMSSSYIGRSVDAINNISSLDVLTFNGSDATFNLTQNSVAFVPVSADALQIQIDG
DelMOWin2010_1012543733300000117MarineMSYIGRGIDQIDNISTLDNLTFNGSDATFNLTQNSVAFVPVSADALQIQIDG
JGI20158J14315_1012094233300001355Pelagic MarineMSYIGRGIDQIDNISTLDNLTFNGSDATFNLTQNSVAFVPVSADALQIQIDGV
JGI24006J15134_1005363343300001450MarineMSYIGRGIDQIDNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQI
JGI24006J15134_1010287643300001450MarineMSYIGRNIDSIDNIATLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDG
JGI24003J15210_1008269833300001460MarineMSYIGRNIDSIDNIATLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQ
JGI24003J15210_1017579833300001460MarineMSYIGRGIDQIDNISTLDNLSFNGSSATFNLTQNSVAFVPVSADALQIQIDG
JGI24004J15324_1005005313300001472MarineMYIGRNIDSINNIATLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDG
JGI24004J15324_1007029913300001472MarineMSSHLGRGIDQIDNISTLDNLSFNGSSATFNLTQNSVAFVPVSADALQIQIDG
JGI24004J15324_1007030913300001472MarineMSYIGRNIDSIDNIATLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGV
JGI24004J15324_1010714313300001472MarineMSYIGRNIDSINNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQI
GOS2229_102873423300001963MarineMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTCS
NAP4_112534533300003474EstuarineMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVI
Ga0075462_1004614513300006027AqueousMSYIGRGIDQIDNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVI
Ga0098038_107601443300006735MarineMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGILQSGNYTVSGS
Ga0098048_105227613300006752MarineMSYIGRGIDQIDNISTLDNLSFSGSTATFNLTQNSVAFVPVSADALQIQIDGV
Ga0098054_115685333300006789MarineMSYIGRGIDQIDNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVS
Ga0070754_1014622913300006810AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQS
Ga0070754_1016184033300006810AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQ
Ga0070754_1017574443300006810AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTCSGSQ
Ga0070754_1018585813300006810AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQI
Ga0070754_1019838613300006810AqueousMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGSTVT
Ga0070754_1022581533300006810AqueousMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQI
Ga0075477_1010874643300006869AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQS
Ga0070750_1010586543300006916AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGST
Ga0070750_1011789333300006916AqueousMYIGRNIDSINNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGVIQSG
Ga0070750_1016395013300006916AqueousMSYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVS
Ga0070750_1016786813300006916AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVS
Ga0070750_1020505833300006916AqueousMSSSYIGRSVDAINNISTLDNLSFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVI
Ga0070746_1012671543300006919AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQID
Ga0070746_1016850513300006919AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQ
Ga0070746_1019497533300006919AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNTVAFNIVSVDALQIQIDGIIQVGNFTQTGA
Ga0070746_1021831113300006919AqueousMSYIGRGIDQIDNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQIDG
Ga0070746_1022536313300006919AqueousMSSSYIGRSVDAINNISTLDNLTFNGSDATFNLTQNGVAFTPVSSSALNIQI
Ga0070748_113266513300006920AqueousMSYIGRGIDQIDNISTLDNLTFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYT
Ga0098045_101381763300006922MarineMSYIGRGIDQIDNISTLDNLSFSGSTATFNLTQNSVAFVPVSADALQIQIDGVIQSGN
Ga0070745_108548433300007344AqueousMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGS
Ga0070745_110007313300007344AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGV
Ga0070751_106612833300007640AqueousMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGSTVTFDFT
Ga0070751_117326613300007640AqueousMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTV
Ga0075480_1022745513300008012AqueousMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNGVAFTPVSADALQIQIDGVIQSGNYTVSGSTV
Ga0115566_1082954313300009071Pelagic MarineMSYIGRGIDQIDNISTLDNLTFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQ
Ga0115545_129225533300009433Pelagic MarineMSYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVI
Ga0115546_103699413300009435Pelagic MarineMSYIGRNIDSINNISTLDNLSFNGVLQTFNLTQNSVAFVPVSADALQIQIDGVIQ
Ga0098043_121661333300010148MarineMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQAN
Ga0098061_122677733300010151MarineMSYIGRSVDAIDNISTLDNLSFNGSDATFNLTQNSVAFTPVSADALQIQID
Ga0181401_105723113300017727SeawaterMSYIGRGIDQIDNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGSTVTF
Ga0181396_103923633300017729SeawaterMSYIGRGIDQIDNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSG
Ga0181399_105187043300017742SeawaterMSSSYIGRSVDAINNISSLDVLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGN
Ga0181397_107605813300017744SeawaterMSSSYIGRSVDAIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTV
Ga0181405_104896343300017750SeawaterMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSG
Ga0181411_105223213300017755SeawaterMSSSYIGRSVDAINNISSLDVLSFNGSDATFNLTQNSVAFVPVSADALQIQIDG
Ga0181411_108007043300017755SeawaterMSNYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGST
Ga0181420_103361013300017757SeawaterMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDWHGNTPKSN
Ga0181409_107968613300017758SeawaterMSSSYIGRSVDAINNISSLDVLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTV
Ga0181408_106769713300017760SeawaterMSSSYIGRSVDAINNISSLDVLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQ
Ga0181410_109270533300017763SeawaterMSNYIGRGIDQIDNISTLDNLSFNGSDATFNLTKNGVAFTPVSSSALNIQIDGVI
Ga0181385_125952933300017764SeawaterMSYIGRGIDQIDNISTLDNLSFSGSTATYNLTQNSVAFVPVSADALQIQIDGVIQSG
Ga0181406_108585613300017767SeawaterMSYIGRGIDQIDNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGVIQS
Ga0187220_107465343300017768SeawaterMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFNIVSVDALQIQIDGIIQVGN
Ga0181394_107108343300017776SeawaterMSYIGRGIDQIDNISTLDNLTFNGSDATFNLTQNSVAFVPVSADALQIQ
Ga0181394_114045113300017776SeawaterMSYIGRGIDQIDNISTLDNLSFSGSTATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYT
Ga0181380_114141533300017782SeawaterMSYIGRGIDQIDNISTLDNLSFSGSTATFNLTQNSVAFVPVSADALQIQIDGVIQ
Ga0181603_1017092833300020174Salt MarshMYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGSTVTFDFT
Ga0211678_1003164413300020388MarineMSNYIGRSVDAINNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQI
Ga0211678_1017727013300020388MarineMSYIGRGIDQIDNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDG
Ga0222717_1005916413300021957Estuarine WaterMSYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYT
Ga0222718_1007681153300021958Estuarine WaterMSYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGV
Ga0222718_1049814313300021958Estuarine WaterMSSSYIGRSVDAINNISSLDVLTFNGSDATFNLTQNSVAFVPVSADALQIQIDGV
Ga0222716_1034513413300021959Estuarine WaterMSYIGRGIDQIDNISTLDNLTFNGSDATFNLTQNSVAFVPVSADALQIQIDGVI
Ga0222719_1025311933300021964Estuarine WaterMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSG
Ga0212021_113639033300022068AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTCSGSQ
Ga0224906_107490013300022074SeawaterMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGS
Ga0212020_108795823300022167AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVI
Ga0196887_105080743300022178AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVS
Ga0196891_105465133300022183AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYT
Ga0209535_107792143300025120MarineMSYIGRGIDQIDNISTLDNLSFNGSSTTFNLTQNSVAFVPVSADALQIQIDGV
Ga0209535_109554613300025120MarineMSSYLGRGIDQIDNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSG
Ga0209535_109675713300025120MarineMSSYIGRGIDQIDNISTLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQIDGVIQAN
Ga0209535_115917033300025120MarineMSSSYIGRSVDAIDNISSLDVLTFNGSLQTFNLTQNSVAFVPVSADALQIQIDG
Ga0209535_121947423300025120MarineMSYIGRGIDQIDNISTLDNLSFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGS
Ga0209336_1004356533300025137MarineMYLGRGIDQIDNIATLDNLSFNGSDTVFNLTQNSVAFNIISVSALQIQIDGII
Ga0209336_1005793313300025137MarineMSYIGRGIDQIDNISTLDNLSFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQSGNY
Ga0209336_1007975633300025137MarineMSYIGRNIDSIDNIATLDNLSFNGSLQTFNLTQNSVAFVPVSADALQIQI
Ga0209336_1008504913300025137MarineMSSSYIGRSVDAIDNISSLDVLTFNGSLQTFNLTQNSVAFVPVSADALQIQIDGV
Ga0209336_1008651613300025137MarineMSYIGRGIDQIDNISTLDNLSFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVI
Ga0209645_111682413300025151MarineMSYIGRGIDQIDNISTLDNLSFSGSTATYNLTQNSVAFVPVSADALQI
Ga0209337_102898213300025168MarineMSYIGRGIDQIDNISTLDNLSFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQ
Ga0208148_102191553300025508AqueousMSYIGRGIDQIDNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTCSG
Ga0208148_102382513300025508AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDG
Ga0209194_102489013300025632Pelagic MarineMSYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQS
Ga0208643_105911213300025645AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQI
Ga0208643_108233033300025645AqueousMSYIGRGIDQIDNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYT
Ga0208134_108242213300025652AqueousMSYIGRGIDQIDNISTLDNLTFNGSSTTFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTCSGSQ
Ga0208899_111537843300025759AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQ
Ga0208767_109644613300025769AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTCS
Ga0208767_110123043300025769AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNY
Ga0208767_120356913300025769AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQID
Ga0208427_108714013300025771AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNY
Ga0208425_104453513300025803AqueousMSYIGRGIDQIDNISTLDNLSFNGSSATFNLTQNSVAFVPVSADALQIQIDGVIQANN
Ga0209714_117574633300025822Pelagic MarineMSYIGRGIDQIDNISTLDNLTFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNY
Ga0208645_113111013300025853AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSG
Ga0208644_109188953300025889AqueousMSYIGRGIDQIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQADN
Ga0208644_112932443300025889AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGN
Ga0209631_1014716213300025890Pelagic MarineMYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGSTVTF
(restricted) Ga0233415_1031334513300027861SeawaterMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQA
Ga0348335_020832_2965_31563300034374AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGS
Ga0348335_098291_772_9273300034374AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDG
Ga0348336_095631_1_1623300034375AqueousMSYIGRNIDSINNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVI
Ga0348337_051653_1455_16463300034418AqueousMYIGRGIDSIDNISTLDNLSFNGSDATFNLTQNSVAFVPVSADALQIQIDGVIQSGNYTVSGST


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