NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F083368

Metagenome Family F083368

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083368
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 45 residues
Representative Sequence MQVYNVRKLHFQANLCEVFAEDKQQHYCGDLVLGWAVLQKTVFNH
Number of Associated Samples 5
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 4
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal corpus
(100.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.53%    β-sheet: 0.00%    Coil/Unstructured: 42.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00076RRM_1 2.65
PF00078RVT_1 2.65
PF13465zf-H2C2_2 0.88
PF14160FAM110_C 0.88
PF06093Spt4 0.88



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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001463|JGI24021J15306_10083428Not Available2637Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Ecteinascidia TurbinataHost-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001463Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 1Host-AssociatedOpen in IMG/M
3300001539Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2Host-AssociatedOpen in IMG/M
3300001689Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 4Host-AssociatedOpen in IMG/M
3300001913Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 3Host-AssociatedOpen in IMG/M
3300027611Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24021J15306_1000428933300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFADDKQQHYCGDLVLGWVVLQKTVFNH*
JGI24021J15306_1000998963300001463Ecteinascidia TurbinataMQAYNVRKLHFQANLCEVFAEDKQQHYCGDIVLRWAVREVLT*
JGI24021J15306_10013647113300001463Ecteinascidia TurbinataMQVYHVKKLHFQVNLCEVFAGDKQQHYCGDLVLGWAVLQKTVFNQ*
JGI24021J15306_10017610123300001463Ecteinascidia TurbinataMRVYNVEKLHFQANLCEVFAEDKQQHYCEDLVLGWAVLQKPVFNH*
JGI24021J15306_1001837843300001463Ecteinascidia TurbinataVYNVRKSHFQANLCEVFAEDKQQHYCGDLVLELEVLQKADFNHEQTGFPSKL*
JGI24021J15306_10027798113300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCGDLVLGWAVLQKTVFNH*
JGI24021J15306_1002964313300001463Ecteinascidia TurbinataVRKLHFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNH*
JGI24021J15306_1003174723300001463Ecteinascidia TurbinataMQVYNVIKLHFQANLCEVFAENKYCGDLVLGWEVLQKTVFNR*
JGI24021J15306_1003534183300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCGDLVLGWVVLQKTLFNH*
JGI24021J15306_1004101913300001463Ecteinascidia TurbinataVYNVRELHFQANLCEVFAEDKQQHYCGDLVLGWVVLQ
JGI24021J15306_1005900743300001463Ecteinascidia TurbinataMQVHDVTKLHFQTNLCESFAEDKQQHYCGDLILGWVVLQKTVFKH*
JGI24021J15306_1006064533300001463Ecteinascidia TurbinataMQVYDVRELHFQANLRKDFAEDKQQHYCEDSVIGWEVLQKTVFNH*
JGI24021J15306_1006253073300001463Ecteinascidia TurbinataMQVYNVRELHFQANLCEVFAEDKQQYYCGDLVLGWAILQKTVFNHE*
JGI24021J15306_1006279943300001463Ecteinascidia TurbinataMQVYNVSKLHFQANLSEVFAKDKAALGCCGDSFLRWAVLQKTVSKHDFSEKVGEI*
JGI24021J15306_1006894433300001463Ecteinascidia TurbinataMQVYNVRILHFQANLCEVFTEDTQQHYCGDLGLGWAVLQKTVFHH*
JGI24021J15306_1007253433300001463Ecteinascidia TurbinataMQVYNVKELHFQANLCEVFAEDKQQHYCEDLVLGSAVLQKAVFNH*
JGI24021J15306_1007532123300001463Ecteinascidia TurbinataMQVYKVRKLRFQANLCEAFAEKKQQHYCGDLVLGWAIFQKTDFNH*
JGI24021J15306_1008342843300001463Ecteinascidia TurbinataMQVYHVRKLHFQANLCDVFAEDKQQHYCGDLVLGWAVLQKTDFNH*
JGI24021J15306_1009125943300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLSEVFSEDKQQNYWGDLLLGWAVLQKTVFKH*
JGI24021J15306_1009320313300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCEDLILGWAVLQKTVFNH*
JGI24021J15306_1010084623300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCEDLVLGWTVLQKTVFNH*
JGI24021J15306_1010434113300001463Ecteinascidia TurbinataMQVYNVSKSIMLHFQANLCEVFVEEQKQHYCGDFVSGWAVFF
JGI24021J15306_1010916723300001463Ecteinascidia TurbinataMQVYNVRKLPFQANLCEVFAEDKKQHYCEDFGLGWAVLQKTDFNH*
JGI24021J15306_1010985923300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYWGDLVLGWAVLQKTVFNH*
JGI24021J15306_1011022823300001463Ecteinascidia TurbinataMQVHNVRKLHFQANLCEVFAEDKQQHYCEDLILGWAVLQKTDFNH*
JGI24021J15306_1011809713300001463Ecteinascidia TurbinataKLHFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNH*
JGI24021J15306_1014227113300001463Ecteinascidia TurbinataMQVNNVRELHFQANLCEVFAKDKQQHYCGDLVLGWAVLQKT
JGI24021J15306_1017610413300001463Ecteinascidia TurbinataMQVYNARKVHFQANLSDVFAEDKQHHYCEDFGFGWAVLQKTDFNH*
JGI24021J15306_1018439323300001463Ecteinascidia TurbinataMQVYVRKLYFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNNY*
JGI24021J15306_1021514723300001463Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCGDLFSGWAVLQKTVFNHE*
JGI24021J15306_1021582823300001463Ecteinascidia TurbinataMEVYNVRELHFQANLCEVFAEDKQQHYCGDLVSGWAVLQKTDFNH*
JGI24021J15306_1021625923300001463Ecteinascidia TurbinataMQVCIVRKLHFQVNLCKVFAEDKQQHYCEDLVLGWAVLQKTVFNH*
JGI24021J15306_1023953213300001463Ecteinascidia TurbinataMQVYNVRKLHFQENLCEVFAEDKQQHYCEDFGLGWAVLQKTDFNH*
JGI24022J15233_10000129533300001539Ecteinascidia TurbinataMQVYNVRQLRFQANLCEVFAEDKQQHYCGDLVLGWAVLQKTDF
JGI24022J15233_10005199123300001539Ecteinascidia TurbinataMQVYNVRKLHYQANLCEVFAEDKQQHYFEDVILGWAVLQKLSSTIS*
JGI24022J15233_1001062223300001539Ecteinascidia TurbinataMQVHNVRKLHFQANLCEAFAEDKQQHYCGDLVLGWAVWQKTVFIH*
JGI24022J15233_1001161453300001539Ecteinascidia TurbinataMQVYHVRKLHFQANLCDVFAEDKQQHYCGDLVLAWAVLQKTDFNH*
JGI24022J15233_10018585133300001539Ecteinascidia TurbinataMQRYNLRKLNFQANLCEVFAENKQHYCCGDLVLGWAVLQKTVFNH*
JGI24022J15233_1002601323300001539Ecteinascidia TurbinataMQMYNARKFHFQANLCEVFAEDKQQHYCGDFVLGWVVLQTVFNH*
JGI24022J15233_10031240103300001539Ecteinascidia TurbinataMQVNNVRELHFQANLCEVFAKDKQQHYCGDLVLGWAVLQKTDFNHQ*
JGI24022J15233_1003197913300001539Ecteinascidia TurbinataNVRKLHFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNH*
JGI24022J15233_1004606153300001539Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAENKQQHYCEDLVLGWAVLQKTVFNH*
JGI24022J15233_1005997113300001539Ecteinascidia TurbinataKMQVYNVRKLHFQANLCEVFAEDKQQHYCEDLILGWAVLQKTVFNH*
JGI24022J15233_1006897663300001539Ecteinascidia TurbinataMQLYKVRKLHFKANLCEVFAEDKQQHHCGDLVLGWAILQKTDFNH*
JGI24022J15233_1010335523300001539Ecteinascidia TurbinataMHVYNVRKSHFQANLCEVFAEDKQQHYCGDLVLELEVLQKADFNHEQTGFPSKL*
JGI24022J15233_1012023723300001539Ecteinascidia TurbinataMQLHNVRKLHFQANLCEVSAQDKQQHYCGDLVLGWAVLQKTVFNH*
JGI24022J15233_1013906413300001539Ecteinascidia TurbinataYNVRKLHFQANLCEVFAEDKQQHYCGDLVLGWAVLQKTVFNH*
JGI24022J15233_1014413033300001539Ecteinascidia TurbinataMPVYKVRKLHFQASLCEVFAEDTQQHYCRELVLGWAILQKTDFNH*
JGI24022J15233_1016236713300001539Ecteinascidia TurbinataMQMYNVRKLHFQANLCEVFAEDKQRHYCGDLVLGWAVLQKTVFN
JGI24022J15233_1017290923300001539Ecteinascidia TurbinataMQVYDVRKLHFQANLCEVLAEDKQQHYCEDLVLGWAVLQKTVFNH*
JGI24022J15233_1017631713300001539Ecteinascidia TurbinataMYNVRKLHFQANLCEVFAEDKQRHYCGDLVLGWAVLQKTVF
JGI24022J15233_1021255123300001539Ecteinascidia TurbinataYFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTAFNH*
JGI24022J15233_1023003523300001539Ecteinascidia TurbinataMQVYNVRKLHFQASLCEIFAEDKQQHYCEDFGLGWAVLQKTDFNH*
JGI24022J15233_1024511923300001539Ecteinascidia TurbinataMEVYNVRELHFQANLCEVFAEDKQQHYCRDLVSGWAVLQKTDFNH*
JGI24159J19872_1002144153300001689Ecteinascidia TurbinataMQRYNVRKLNFQANLCEVFAENKQHYCCGDLVLGWAVLQKTVFNH*
JGI24159J19872_1003226213300001689Ecteinascidia TurbinataHFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNH*
JGI24159J19872_1003305863300001689Ecteinascidia TurbinataMQIYNGKKLHLQANLCEVFAENKMQNYCSNIVLVLRLEVLQKTVFNH*
JGI24159J19872_1003338913300001689Ecteinascidia TurbinataRIQKQTAQNLKMQVYNVRKLHFQANLCEVFAEDKQKRYCGNLVLGWAIFQKTVFNH*
JGI24159J19872_1004357243300001689Ecteinascidia TurbinataMEVYNVRTFHFQANLCEVFAEDKQQHYCGDLVLGWVALQKTISNHQ*
JGI24159J19872_1004891423300001689Ecteinascidia TurbinataMQVYHVKKLHFQVILCEVFAEDKQQHYCGDLVLGWAVLQNTVFNH*
JGI24159J19872_1005303033300001689Ecteinascidia TurbinataMQVYDVRELHFQANLRKVFAEDKQQHYCEDSVIGWEVLQKTVFNH*
JGI24159J19872_1005567713300001689Ecteinascidia TurbinataWLSRTQKQTAQNLKMQVYNVRKLHFQAKLCEVFAEDKQQHNCGDLVLGWAALLKTVFNH*
JGI24159J19872_1005968423300001689Ecteinascidia TurbinataMQVYNVRKLHFQTNLCEVFAEDKQQHYCGDLVLGWAVLQKSVCNH*
JGI24159J19872_1006021143300001689Ecteinascidia TurbinataMHVYNVGKLHFQANLCEVISEDKQQHYCGDLVLGWVVLQKTVSNH*
JGI24159J19872_1006279343300001689Ecteinascidia TurbinataMQVYNVRKLYFQANLYEVFAKDKQQHYCGDLVSGWAVLQKTVFNH*
JGI24159J19872_1006366413300001689Ecteinascidia TurbinataVYNVRKLHFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNH*
JGI24159J19872_1006535573300001689Ecteinascidia TurbinataMQVNNVRELHFQANLCEVFAKDKQQHYCGDLVLGWAVLQKTD
JGI24159J19872_1009385213300001689Ecteinascidia TurbinataMQEYNVRKLHFQANLCEVFAEGKQQHYCEDLVLGWAVLQKTVINHQQTGFPSKL*
JGI24159J19872_1015179423300001689Ecteinascidia TurbinataMQVYNVRKLPFQANLCGMFSKDKQQHNYGDLVLGWVVMQKTVFNHY*
JGI24159J19872_1016074413300001689Ecteinascidia TurbinataKMQVYNVRKLHFQANLCEVFAEDKQQHYCGDLVLGWVILQKTVTNH*
JGI24159J19872_1016872933300001689Ecteinascidia TurbinataLETQVYNVRKLHFQANLSDVFAEDKQQHYCGDLVLGWVVLQKTVFNH*
JGI24159J19872_1021454913300001689Ecteinascidia TurbinataQLHNVRKLHFQANLCEVSAQDKQQHYCGDLVLGWAVLQKTVFNH*
JGI24158J21664_10000763463300001913Ecteinascidia TurbinataMQVYNVRQLRFQANLCEVFAEDKQQHYCGDLVLGWAVLQKTD
JGI24158J21664_1002051923300001913Ecteinascidia TurbinataMQVYNVRKLHFQENHFEVFAEDKKQHYCGDLILGWAVLQKIVFSHK*
JGI24158J21664_1005438463300001913Ecteinascidia TurbinataMQMYNVRKLHFQANLCEVFAEDKQRHYCGDLVLGWAVLQ
JGI24158J21664_1006413253300001913Ecteinascidia TurbinataMQVYNVRNLHFQANICEVFAEGKQQHYCGDLVLGWVVLQKTVFNH*
JGI24158J21664_1007082343300001913Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAENKYCGDLVLGWEVLQKTVFNR*
JGI24158J21664_1010760553300001913Ecteinascidia TurbinataQKQTAQNLKMQVYNVRKLHFQANLCEVFAEDKQQHNCGDLVLGWAALLKTVFNH*
JGI24158J21664_1012729813300001913Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCGDLVLGWVILQKTVTNH*
JGI24158J21664_1018317813300001913Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCGDLVLGWVVLQKTVFN
Ga0210059_1000046223300027611Ecteinascidia TurbinataMQVYNVRQLRFQANLCEVFAEDKQQHYCGDLVLGWAVLQKTDFNH
Ga0210059_1000240373300027611Ecteinascidia TurbinataMQVYNVRKLHYQANLCEVFAEDKQQHYFEDVILGWAVLQKLSSTIS
Ga0210059_1000577373300027611Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCEDLVLGWTVLQKTVFNH
Ga0210059_100135653300027611Ecteinascidia TurbinataMQVYNVRNLQFQVNLCDVSAEDKQQHYGGDQVLGWAVLQKTVFNH
Ga0210059_1003453103300027611Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCEDLILGWAVLQKTVFNH
Ga0210059_1006535123300027611Ecteinascidia TurbinataMKMQVYVRKLYFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTAFNH
Ga0210059_1007181143300027611Ecteinascidia TurbinataMDSVQVYNVRKLHFQKNLIEVFAXDIQQHYCEDLVLGWAVLQKIVFNHL
Ga0210059_100755733300027611Ecteinascidia TurbinataMQVYNVRKLPFQANLCEVFAEDKKQHYCEDFGLGWAVLQKTDFNH
Ga0210059_1012785103300027611Ecteinascidia TurbinataMKVQVYVRKLYFQANLCEVFTEDKQQHYCEDLVLGWAVLQKTVFNH
Ga0210059_101430373300027611Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKKHHYCGDLVLGWAVLQKTVFNH
Ga0210059_101562593300027611Ecteinascidia TurbinataMQVYNVRKLHFQASLCEIFAEDKQQHYCEDFGLGWAVLQKTDFNH
Ga0210059_101721313300027611Ecteinascidia TurbinataMQVYDVRKLHFQANLCEVLAEDKQQHYCEDLVLGWAVLQKTVFNH
Ga0210059_102010043300027611Ecteinascidia TurbinataMQVYNIRKLHFQANLCGVFAEDKQQHYCEDLVLGWAVLQKTVFNH
Ga0210059_102128813300027611Ecteinascidia TurbinataMQVYHVRKLHFQANLCDVFAEDKQQHYCGDLVLAWAVLQKTDFNH
Ga0210059_102169073300027611Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNH
Ga0210059_102447653300027611Ecteinascidia TurbinataMQVYVRNVHFQANLXEVYAEDKQQHYCEDLVLGWAVLQKTVFNH
Ga0210059_102697543300027611Ecteinascidia TurbinataMQVYKVRKLRFQANLCEAFAEKKQQHYCGDLVLGWAIFQKTDFNH
Ga0210059_102903013300027611Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQHCCGDLVLGWAVLQKTVF
Ga0210059_103960823300027611Ecteinascidia TurbinataMQVYNVRKLHFQENLCEVFAEDKQQHYCEDFGLGWAVLQKTDFNH
Ga0210059_104165133300027611Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFAEDKQQRYCEDLVLGWVVLQKAVFNH
Ga0210059_104202843300027611Ecteinascidia TurbinataMYNVRKLHFQANLCEVFAEDKQRHYCGDLVLGWAVLQKTVFNH
Ga0210059_104322123300027611Ecteinascidia TurbinataMQVYHVSKLYFQANLCEVFVEDKQQHYCGDLVLEWAVLQKTVFNHQ
Ga0210059_104331143300027611Ecteinascidia TurbinataMQVHNVRKLHFQTNLCQGLAENKQQRYCGDLVLRWVVLQKTVCNH
Ga0210059_104540213300027611Ecteinascidia TurbinataMKMQVYVRKLYFQANLCEVFAEDKQQHYCEDLVLGWAVLQKTVFNNY
Ga0210059_104659233300027611Ecteinascidia TurbinataMQVYNVRKLHFQANLCEVFADDKQQHHCGDLVLGWVVLQKTVFNH
Ga0210059_105170643300027611Ecteinascidia TurbinataMQVYDVRELHFQANLRKDFAEDKQQHYCEDSVIGWEVLQKTVFNH
Ga0210059_105182653300027611Ecteinascidia TurbinataMQVNNVRELHFQANLCEVFAKDKQQHYCGDLVLGWAVLQKTDFNHQ
Ga0210059_105582123300027611Ecteinascidia TurbinataMQVYNVRILHFQANLCEVFTEDTQQHYCGDLGLGWAVLQKTVFHH
Ga0210059_106365123300027611Ecteinascidia TurbinataMHVYNVRKSHFQANLCEVFAEDKQQHYCGDLVLELEVLQKADFNHEQTGFPSKL
Ga0210059_106375753300027611Ecteinascidia TurbinataMQVHDVTKLHFQTNLCESFAEDKQQHYCGDLILGWVVLQKTVFKH
Ga0210059_106601113300027611Ecteinascidia TurbinataMQVCSVGKLHFQANLCEDFAEDKQQHYCGDLVLGXAVLQKIVFNH
Ga0210059_107215243300027611Ecteinascidia TurbinataMQVHNVRKLHFQANLCEVFAEDKQQHYCEDLILGWAVLQKTDFNH
Ga0210059_107215423300027611Ecteinascidia TurbinataMQVYNARMLHFQANLFEVFAEDTIVQHYFTIEQHYCEDFGLGWAVLQKTDFNH


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