NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F083357

Metagenome Family F083357

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083357
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 43 residues
Representative Sequence MKLHVSAYNGHRQVSTTIKKSLYICVTRVDVEISMHQSPVCSNI
Number of Associated Samples 7
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.88 %
Associated GOLD sequencing projects 4
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.115 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 30.56%    Coil/Unstructured: 69.44%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF00009GTP_EFTU 0.89



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.12 %
All OrganismsrootAll Organisms0.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001544|JGI20163J15578_10081023All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Cucujiformia1930Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001544Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002125Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4Host-AssociatedOpen in IMG/M
3300002127Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3Host-AssociatedOpen in IMG/M
3300002175Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5Host-AssociatedOpen in IMG/M
3300002185Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300027904Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027984Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20163J15578_1005720163300001544Termite GutMKLHVLAYNDHCQVSTTIKKSLYICVRRVDVEISMHRDLYI
JGI20163J15578_1006091123300001544Termite GutMKLHVSACKGHRQVSTTIKESLYIYVGRVDVVISMHQSPVCSNI*
JGI20163J15578_1008102323300001544Termite GutMKLHVSAYNGNHQVSTTIKKSLYICVGRVDVEISVHQSPVRSNI*
JGI20163J15578_1011644443300001544Termite GutVKLHVSACNGHRQVSTTIKKSLYICVRRVDEEISMHH
JGI20163J15578_1012629023300001544Termite GutMKLHVSVYNGHRQVSIPIKGSLYICVRRVDVEISMHQSPV*
JGI20163J15578_1026392733300001544Termite GutILIMKLHVSAYNGHRQVSTMIKKVYIAVSGCVDVEIFMHQSPVCSNI*
JGI20163J15578_1028069733300001544Termite GutMKLHDSACNGHRQISTTIKKSLYICVRRVDVEISMHQSPV
JGI20163J15578_1028565833300001544Termite GutMKLHVSAYNGHHQVSTTIKKNYIAVGGRVDVEISMHQSPVCSNI*
JGI20163J15578_1032162513300001544Termite GutMKLHVSACNGQRQVSTPIKKSLYICVGCVDVEISMHQYPVA
JGI20163J15578_1033476213300001544Termite GutMKHVSAYNGHRQVSTTIKKNLYICVRRVDVVEITMHQSPVCSNI*
JGI20163J15578_1034903633300001544Termite GutMKLRVSAYNGNRQVSTTIKKSLYICVRRVDVEISMHQS
JGI20163J15578_1040681423300001544Termite GutMKLHVSAYNGHRHVSTTIKKSLYICVRRVDVEISMHQSPV
JGI20163J15578_1044923213300001544Termite GutGHRQVSTTIKKNLYICVRRVDVEISMHQSPVCSNI*
JGI20163J15578_1054397833300001544Termite GutMNLHVSAYNGHRQVSTTIKKSLYVCVRRVDVEISMHQSPV
JGI20163J15578_1056849823300001544Termite GutLHVSAYNGHRQVSTTIKKSLYICVGCVDVEISMHQSPICSNI*
JGI20163J15578_1057348323300001544Termite GutMKLHVSACNGHHQVSTTIKKSLCICVGRVDEEISMYQSSVCSNI*
JGI20163J15578_1059779913300001544Termite GutYILIMKLHVSAYNGHRHVSTTIKKSLYISVGCVDVEISMHQSPVCSNI*
JGI20163J15578_1063736113300001544Termite GutMKLHVSAYDGQRQVSTTIKKSLYICVGRVDVEISMHQSPVC
JGI20165J26630_1011305143300002125Termite GutMKLHVAAYNGYRQVSTTIKKSLYICVRRVYVEISMHQSPVCTNI*
JGI20165J26630_1021288323300002125Termite GutERCYILIMKLHVSAYNGHRQVSTMIKKVYIAVSGCVDVEIFMHQSPVCSNI*
JGI20165J26630_1028262823300002125Termite GutMKLHVSAHNGHRQVSTTIKKNLYICVGRVDVEISMHQSPVCSNI*
JGI20165J26630_1032827623300002125Termite GutMELHVSACNGHRQVYTTIKKSLYICVRRVDVEISMHQSPV
JGI20165J26630_1032981333300002125Termite GutYNGHRQVSTTIKSLYICVGRVDVEISMHQSPVCSNI*
JGI20165J26630_1037959723300002125Termite GutMKLRVSASDGHRRVSTTIKKSLYICVGRVDVEISMHQSSVCTNI*
JGI20165J26630_1041732413300002125Termite GutMLYILIMKLHVSAYNGHRQVSTTIKKSLYICVECVDVEISMHQ
JGI20165J26630_1049915123300002125Termite GutMLYSNMKLHVSAYNGHRQVSTTSRYICVGRVDVEISMHQSPVCSNI*
JGI20165J26630_1052118813300002125Termite GutMKLHVSAYDGQRQVSTTIKKSLYICVRRVDVEISMHQSPVCSNI
JGI20165J26630_1052210113300002125Termite GutMKLHVSACNGHHQVSTPIKKSLYICVGRVDVEISMHQSPV
JGI20165J26630_1058869423300002125Termite GutMKLHVSVYNGHRQVSTTIKKSLYICVRGVDVEISM
JGI20165J26630_1075768713300002125Termite GutMKLHVSAYNGHRQVSTTIKKSLYICVTRVDVEISMHQSPVCSNI*
JGI20165J26630_1077235623300002125Termite GutMKLHVSACKGHRQVSTTIKESLYIYVRRVDVVISMHQSPVCSNI*
JGI20165J26630_1079978013300002125Termite GutCYILIMKLHVSAYNGHRRVSTTIKKSLYICGGRVDVEISMHQSPVCSNI*
JGI20164J26629_1029075023300002127Termite GutRCYILIMKLHVSAYNGHRQVSTMIKKSHIAVSGCVDVEIFMHQSPVCSNI*
JGI20164J26629_1044736913300002127Termite GutVSACNGHRQVSTTIKKSLYICVRRVDEEISMHQPPVCSNI*
JGI20166J26741_1001889013300002175Termite GutMKLHISAYNEHRQVSTTIKKSLYICVGCVDVEISMHQSPVCS
JGI20166J26741_1001917623300002175Termite GutMKLHVSACNGNRQVSKTIKKSLYICVRRVDVEISMHQSPVCSN
JGI20166J26741_1002553323300002175Termite GutKLHVSACNGHRQVSTTIKKSLYICVGCVDVEISMHPTPVCSNI*
JGI20166J26741_1006852213300002175Termite GutMKLHVSPYNGHRQVSTPIKKSLYICVGCVDVEISMHQSP
JGI20166J26741_1008800713300002175Termite GutLIMKLHVSACNGHRQVSTTIKKSLYICVRRVDEEISMHQPPVCSNI*
JGI20166J26741_1009474963300002175Termite GutGHRQVSTTIKKSLYICVGRVDVEISMHQSPVCSHI*
JGI20166J26741_1009531223300002175Termite GutMKLHVSACKGHRQVSTTIKKSLYICVRRVDVEISMHREFRKM
JGI20166J26741_1015223623300002175Termite GutHVSACNGHHQVFTTIKKSLYMCVGRVDVEISMHKSPVCSDI*
JGI20166J26741_1015797253300002175Termite GutMKLHVSAYNGHRQVSTTIKKSLYICVRRVDVQISMHQ
JGI20166J26741_1015835043300002175Termite GutMKLHVSAYNGHSQVSTTIKKGLYICVRRVDVEISMHQSPVCSNI
JGI20166J26741_10220559163300002175Termite GutMKLHVSVCNGYHQVSTTIKKSLYICVGRIDDEISMHQSPVCSDI*
JGI20166J26741_1029623813300002175Termite GutMKLHVSAYNGHRQVSTTIKKSLHICVGAVDVEISMHQSPVCSII*
JGI20166J26741_1038362743300002175Termite GutMKLHVSAYNGHHQVSTTIKKNHIAVGGRVDVEISMHQSPVCSNI*
JGI20166J26741_1076401513300002175Termite GutMKLHVSAYNGHRQVSTTIKKSLYICVRRVDVEISMHQSPVCSNTSCVD*
JGI20166J26741_1100938243300002175Termite GutMKLYVSAYNGHRQVSTTIKKSLYICVRRVDVEISMH
JGI20166J26741_1114657213300002175Termite GutMKLHVSGYNGHRQVSTMIKKSLYICVGCVDVEISMHQSP
JGI20166J26741_1134907213300002175Termite GutMKLHVSAYNGHRQVSTTIKKSLYICGGRVDVEISMHQSPIYSNV*
JGI20166J26741_1143193713300002175Termite GutMKLHASAYNGHRQVSTTIKKSLYICVGRVDVEISMHQ
JGI20166J26741_1147660053300002175Termite GutMKLHVSAYNGHRQVSIPIKGSLYICVGCVDVEISMHQSPIALDNRATGD*
JGI20166J26741_1149121243300002175Termite GutMKLHASTSNGHRQVSTTIKKSLYICGGFVDVEISMYQSPLCSNI*
JGI20166J26741_1149121263300002175Termite GutMKLHVSACNGHRQASTTIKKILYICVGRIDVEISMRQSPVCSNI*
JGI20166J26741_1150581333300002175Termite GutMKLHVSVYNGHRQVSTTIKKSLYICVRGVDVEISMHQSPVCSN
JGI20166J26741_1151732513300002175Termite GutSACNGHRQVSTTIKKILYICVRRVDVEISMHQSPVCSNI*
JGI20166J26741_1156377313300002175Termite GutMKLHVSAYDGHHQVSIPIKGSLYI*VGGVDVEISMHQFPVV
JGI20166J26741_1158028043300002175Termite GutVSAYNGHRQVSTTIKKSLYICVGRVDVEISMHQSPA*
JGI20166J26741_1161632343300002175Termite GutMKLHVSAYNGHRQVSTTIKKSLYICVRGVDVEISMHQSPVC
JGI20166J26741_1165880133300002175Termite GutMKLHDSACNGHRQISTTIKKSLYICVRRVDVEISMHQSPVCSNI
JGI20166J26741_1167831133300002175Termite GutMKLRVSAYNGNRQVSTTIKKSLYICVRRVDVEISMHQSPV
JGI20166J26741_1168066713300002175Termite GutMLYSDMKLHVSAYDGHRQVSIPIKGSLYI*VGGRGVDVEISMHQFP
JGI20166J26741_1172545843300002175Termite GutLHVSAYNGHRQVSTTIKKSLYICVGRVDVEISMYPSPVCSNI*
JGI20166J26741_1172764413300002175Termite GutHVSAYNGHRQVSTTIKKSLYICVRRVDVEISMHESPVFPNI*
JGI20166J26741_1175746123300002175Termite GutMKLHVSAYNGRRQVSTTIKKSLYICVRRVDVEISMHQYPLCFNI*
JGI20166J26741_1176119763300002175Termite GutLIMKLHVSACNGHRQVSTTIKKSLYICVGRVDVEISVHQSPVCSNI*
JGI20166J26741_1178927133300002175Termite GutMNLHVSAYNGHRQVSTTIKKSLYVCVRRVDVEISMHQSPVCSNI
JGI20166J26741_1183888313300002175Termite GutNGHRQVSTTIKKSLYICVGCVDVEISVHQSPVCANI*
JGI20166J26741_1184534733300002175Termite GutMKLHVSACNGHRQASTTINKSLYICMGRIDVEISMHQSPVCSNI*
JGI20166J26741_1185765243300002175Termite GutMKLHISAYNGHRQVSIPIKESIYIRVGCVDVEFSVHQSPVAEQQGIDA*
JGI20166J26741_1188172743300002175Termite GutMKLHVSAYNGHRQVSTPIKKSLYICVGRVDVEISMHQCIVA*
JGI20166J26741_1198927833300002175Termite GutVSACNGHRQVSTMIKKSLYICVGCVDVEISMHQSRVRSNI*
JGI20166J26741_1198983023300002175Termite GutMKLHVSAYNGHHQVSTAIKKSLYICVRRVDVEISMHQSPVCSNI
JGI20166J26741_1200321723300002175Termite GutVVNQPTSLERCYILIMKLHVSAYNGHRRVSTTIEKSLYICVGRVVVEISMHQSPVCSNV*
JGI20166J26741_1202886723300002175Termite GutMLYSNMTLHASAYNGHRQVSIPIKGSLYI*VGGGVDVEISMHQ
JGI20166J26741_1206979123300002175Termite GutMKLHDSAYSGHHQVYIPIKGSLYI*VGGVDVEISMHQFPVALLSS
JGI20166J26741_1208806133300002175Termite GutSLERCYILIMKLHVSAYNGHRHVSTTIKKSLYISVGCVDVEISMHQSPVCSNI*
JGI20166J26741_1211633233300002175Termite GutMKLHVSTYNGHRQVSTTIKKSLYICVRRVDVEISMHQSPV
JGI20166J26741_1214974923300002175Termite GutMKPHVSAYNGHRQVSTTTKKSLYSVSGRVDVEISMHQSPVCSNI*
JGI20166J26741_1223253713300002175Termite GutMKLHVSAYNGHRQVSTTIKKSLYICVGCVDVEISMHQSP
JGI20166J26741_1223447113300002175Termite GutMKLHVSVYNGHLQVSIPIKGSLYI*VGGVDVEISMHQFPV
JGI20163J26743_1033862913300002185Termite GutMLYILIMKLHVSAYNGHRQVSTTIKKSLYICVECVDVEISMHQSPVC
JGI20163J26743_1037834013300002185Termite GutMLYSDMKLHVSAYNGHRQVSIPIKGSLYV*VGGGVDVEIS
JGI20163J26743_1045021723300002185Termite GutHVSAYNGHRQVSTTIKKSLYICVGRVDVEISMHQSPLCSNI*
JGI20163J26743_1045344513300002185Termite GutMKLHISAYNEHRQVSTTIKKSLYICVGCVDVEISMHQSPVCSN
JGI20163J26743_1047906623300002185Termite GutMKLHVSAYNGHRQVTTTIKKGLYICVRRIDEEISMHQSPVCSNI*
JGI20163J26743_1054671313300002185Termite GutMKLHVSVYNGHLQVSIPIKGSLYI*VGGVDVEISMHQFPVALLSS
JGI20163J26743_1067299613300002185Termite GutMKLHVSAYNGHRHVSTTIKKSLYISVGCVDVEISMHQSPVCSNI*
JGI20163J26743_1069184813300002185Termite GutMKLHVSGCNGHRHVSAMIKKSLYICVGRVDVEISMQQSPVCSNI*
JGI20163J26743_1071888723300002185Termite GutMKLHVLAYKGHRQVSTTIKKSLYICVRRVDVEISMHQSPVCS
JGI20163J26743_1075167513300002185Termite GutMKLHVSACNSHHQVSTTIKKSLYICVGRVDVEISMHQSHV
JGI20163J26743_1076069113300002185Termite GutMKLHVSADNSHRQVSTAIKKSQYICVGRVDVEISMHQSPVCSNI*
JGI20163J26743_1080228623300002185Termite GutMKLHVSACNGHRQVSTTIKKSLYICVRRVDVEISMHQSQGTD
JGI20163J26743_1088756113300002185Termite GutERCYILIMKLHVSAYNGHRQVSTPIKKSLYICVRRVDVEISMHQSPVCSNI*
JGI20163J26743_1091674713300002185Termite GutMKLHVSAYNGHRQVSTMIKKSLYICVGRVDVEISMHQSPVCSNI*
JGI20163J26743_1102980613300002185Termite GutMKLHVSAYNGYRQVSIPIKGSLYICVGCVDVEISMHQSPVALL
JGI20163J26743_1107406533300002185Termite GutHVSACNGHHQVSTTIKKSLCICVGRVDEEISMYQSSVCSNI*
JGI20163J26743_1110551213300002185Termite GutMKLHVSGYNGHHQVSTTIKKSLYICVGRDDVEISMHQSPVFSNI*
JGI20163J26743_1114228113300002185Termite GutMKLHVSACNGHRQVSTPIKKSLYISVGSVDVEISMHQSPVCSNI*
JGI20163J26743_1115158213300002185Termite GutMKLHVSACNGHRQVSTTIEKSLYICVGRTDEEVSM
JGI20163J26743_1115765013300002185Termite GutMKLHVSAYNGHRQVSTPIKKSLYICVGCVDVEISMHQSPVCSII
JGI20163J26743_1121623333300002185Termite GutMKLHVSAYKGHRQVSTTIKKSLYICVRRVDVEISMHQSPVCS
JGI20163J26743_1126293313300002185Termite GutMKLRVSAYNGNRQVSTTIKKSLYICVGRVDVEISMHQSPVCSN
JGI20163J26743_1129048043300002185Termite GutMKLHVSAYDGHHQVSIPIKGSLYI*VGGVDVEISMHQFPVAL
JGI20163J26743_1139184633300002185Termite GutMKLHVSAYNGHRQVSTTIKKSLYICVGRVDVEICMHQSPVCSNI*
JGI20163J26743_1141078933300002185Termite GutMKHVSAYNGHRQVSTTIKKNLYICVGRVDVVEITMHQSPVCSNI*
JGI20163J26743_1144745053300002185Termite GutMKLHASAYNGHRQVSTTIKKSLYICVRRVDVEISMHQS
JGI20163J26743_1145686343300002185Termite GutMKLHVSTCNGHHQVSTTVKKSLYVCVRRVDVEISMHQLMHRDLY
JGI20163J26743_1146644563300002185Termite GutMKLHVLASNGHRQVSTTIKKSLYICVRRVDVEISMHQSPVC
JGI20163J26743_1148491413300002185Termite GutMKLHVSTYNGHRQVSTTIKKSLYICVGRVDVEISMHQSPV
Ga0209737_1058026513300027904Termite GutMLYSDMKLHVSAYDGHRQVSIPIKGSLYIXVGGRGVDVEISMH
Ga0209629_1043954913300027984Termite GutMLYSDMKLHVSAYDGHRQVSIPIKGSLYIXVGGRGVDVEISMHQFPVALLS


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