Metagenome / Metatranscriptome Family F083353

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083353
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	88 residues
Representative Sequence	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGFPVDSAVLQQSTDPQALLGIADHFYWLNNGPAAAPLYARAEKLFSE
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.82 %
% of genes near scaffold ends (potentially truncated)	93.81 %
% of genes from short scaffolds (< 2000 bps)	90.27 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.451 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.274 % of family members)
Environment Ontology (ENVO)	Unclassified (24.779 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.133 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.39% β-sheet: 0.00% Coil/Unstructured: 42.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00376	MerR	3.54
PF09278	MerR-DNA-bind	2.65
PF13560	HTH_31	1.77
PF13411	MerR_1	1.77
PF00487	FA_desaturase	0.88
PF00561	Abhydrolase_1	0.88
PF05866	RusA	0.88
PF13643	DUF4145	0.88
PF13538	UvrD_C_2	0.88
PF07510	DUF1524	0.88
PF03235	DUF262	0.88
PF00440	TetR_N	0.88
PF00578	AhpC-TSA	0.88
PF00753	Lactamase_B	0.88
PF13361	UvrD_C	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	2.65
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.88
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.88
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.88
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.45 %
Unclassified	root	N/A	26.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.45 %
Unclassified	root	N/A	26.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.45 %
Unclassified	root	N/A	26.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.41 %
Unclassified	root	N/A	26.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.65 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.02 %
Unclassified	root	N/A	26.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.02 %
Unclassified	root	N/A	26.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.02 %
Unclassified	root	N/A	26.55 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.85 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.77 %
Chloroflexi bacterium RBG_13_60_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_60_13	0.88 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.02 %
Unclassified	root	N/A	26.55 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.19 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.77 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.88 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.88 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.88 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.88 %
Chloroflexi bacterium RBG_13_60_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_60_13	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.02 %
Unclassified	root	N/A	26.55 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6.19 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.77 %
Spirosomaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	0.88 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.88 %
Chloroflexi bacterium RBG_13_60_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_60_13	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.02 %
Unclassified	root	N/A	26.55 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	4.42 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.77 %
Dyadobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter	0.88 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.88 %
Chloroflexi bacterium RBG_13_60_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_60_13	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.02 %
Unclassified	root	N/A	26.55 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	4.42 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.77 %
Dyadobacter flavalbus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → Dyadobacter flavalbus	0.88 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.88 %
Chloroflexi bacterium RBG_13_60_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_60_13	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001082\|JGI12664J13189_1004416	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300001593\|JGI12635J15846_10290982	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300001593\|JGI12635J15846_10313790	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	975	Open in IMG/M
3300004080\|Ga0062385_11287826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300004631\|Ga0058899_11564203	Not Available	606	Open in IMG/M
3300005467\|Ga0070706_102063522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	516	Open in IMG/M
3300005542\|Ga0070732_10868795	Not Available	551	Open in IMG/M
3300005554\|Ga0066661_10572242	Not Available	673	Open in IMG/M
3300005602\|Ga0070762_10559404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300005712\|Ga0070764_10686976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300006028\|Ga0070717_10994256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300006052\|Ga0075029_100618997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300006057\|Ga0075026_100994415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	521	Open in IMG/M
3300006059\|Ga0075017_100013483	All Organisms → cellular organisms → Bacteria → Proteobacteria	5223	Open in IMG/M
3300009174\|Ga0105241_11483535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300009523\|Ga0116221_1332302	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300009524\|Ga0116225_1268344	Not Available	764	Open in IMG/M
3300009552\|Ga0116138_1105087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300009623\|Ga0116133_1030002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1343	Open in IMG/M
3300009665\|Ga0116135_1190323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	781	Open in IMG/M
3300009700\|Ga0116217_10993481	Not Available	514	Open in IMG/M
3300010379\|Ga0136449_100749085	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300010379\|Ga0136449_102248952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300010379\|Ga0136449_103515985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300011120\|Ga0150983_16614523	Not Available	636	Open in IMG/M
3300012096\|Ga0137389_11647838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012200\|Ga0137382_11239027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012205\|Ga0137362_10614910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300012359\|Ga0137385_11641628	Not Available	507	Open in IMG/M
3300012362\|Ga0137361_11049938	Not Available	735	Open in IMG/M
3300012927\|Ga0137416_11268239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012986\|Ga0164304_11475140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300014156\|Ga0181518_10358580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300014156\|Ga0181518_10364272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300014158\|Ga0181521_10496480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300014162\|Ga0181538_10277901	Not Available	916	Open in IMG/M
3300014493\|Ga0182016_10430660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300014501\|Ga0182024_10662181	Not Available	1295	Open in IMG/M
3300014502\|Ga0182021_10835712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300014657\|Ga0181522_10726463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	607	Open in IMG/M
3300014838\|Ga0182030_10081084	All Organisms → cellular organisms → Bacteria → Acidobacteria	4684	Open in IMG/M
3300017823\|Ga0187818_10328456	Not Available	674	Open in IMG/M
3300017925\|Ga0187856_1177012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300017928\|Ga0187806_1369217	Not Available	515	Open in IMG/M
3300017940\|Ga0187853_10252456	Not Available	809	Open in IMG/M
3300017946\|Ga0187879_10256984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300018002\|Ga0187868_1311421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300018006\|Ga0187804_10478640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300018023\|Ga0187889_10275620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300018030\|Ga0187869_10338235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	721	Open in IMG/M
3300018035\|Ga0187875_10496740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300018043\|Ga0187887_10347856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300018044\|Ga0187890_10125111	Not Available	1483	Open in IMG/M
3300018047\|Ga0187859_10524831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300018062\|Ga0187784_11262453	Not Available	586	Open in IMG/M
3300018090\|Ga0187770_11189966	Not Available	616	Open in IMG/M
3300018433\|Ga0066667_12266206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300020581\|Ga0210399_10702056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300020583\|Ga0210401_10341679	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300021168\|Ga0210406_11351568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300021170\|Ga0210400_10023167	All Organisms → cellular organisms → Bacteria	4832	Open in IMG/M
3300021171\|Ga0210405_10089302	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300021180\|Ga0210396_11214487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300021407\|Ga0210383_10077345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2784	Open in IMG/M
3300021407\|Ga0210383_11389770	Not Available	584	Open in IMG/M
3300021432\|Ga0210384_10668560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300021433\|Ga0210391_11549966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300021474\|Ga0210390_11310527	Not Available	580	Open in IMG/M
3300021479\|Ga0210410_10048001	All Organisms → cellular organisms → Bacteria	3715	Open in IMG/M
3300021559\|Ga0210409_10415448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1203	Open in IMG/M
3300023250\|Ga0224544_1001331	All Organisms → cellular organisms → Bacteria → Acidobacteria	3367	Open in IMG/M
3300024288\|Ga0179589_10525484	Not Available	550	Open in IMG/M
3300025412\|Ga0208194_1034567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	793	Open in IMG/M
3300026984\|Ga0208732_1026596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300027609\|Ga0209221_1135321	Not Available	619	Open in IMG/M
3300027745\|Ga0209908_10174944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	577	Open in IMG/M
3300027869\|Ga0209579_10065696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1919	Open in IMG/M
3300027889\|Ga0209380_10436828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300028906\|Ga0308309_10387210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1197	Open in IMG/M
3300029636\|Ga0222749_10258091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300029636\|Ga0222749_10577288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300029889\|Ga0246001_1065093	Not Available	735	Open in IMG/M
3300029986\|Ga0302188_10168794	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300030007\|Ga0311338_10685217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300030007\|Ga0311338_10746779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300030399\|Ga0311353_11157604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300030503\|Ga0311370_11641899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300030618\|Ga0311354_11079445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	734	Open in IMG/M
3300030763\|Ga0265763_1015166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300030862\|Ga0265753_1120180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300031010\|Ga0265771_1027742	Not Available	527	Open in IMG/M
3300031028\|Ga0302180_10038181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2965	Open in IMG/M
3300031057\|Ga0170834_112520745	Not Available	667	Open in IMG/M
3300031231\|Ga0170824_113305980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300031258\|Ga0302318_10202352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300031469\|Ga0170819_13431903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300031525\|Ga0302326_10313318	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300031525\|Ga0302326_10655558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_60_13	1546	Open in IMG/M
3300031753\|Ga0307477_10765128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300031754\|Ga0307475_10209562	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300031788\|Ga0302319_11539464	Not Available	590	Open in IMG/M
3300031823\|Ga0307478_10251452	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300031962\|Ga0307479_11246852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300032160\|Ga0311301_11694865	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → Dyadobacter flavalbus	761	Open in IMG/M
3300032160\|Ga0311301_12962443	Not Available	512	Open in IMG/M
3300032783\|Ga0335079_11218815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300032805\|Ga0335078_11650514	Not Available	706	Open in IMG/M
3300032898\|Ga0335072_10902473	Not Available	827	Open in IMG/M
3300032955\|Ga0335076_11081815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300032955\|Ga0335076_11812757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300033822\|Ga0334828_092260	Not Available	757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.22%
Aquatic	Environmental → Aquatic	23.89%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.95%
Freshwater	Environmental → Aquatic → Freshwater	21.24%
Peat	Environmental → Terrestrial → Peat	13.27%
Sediment	Environmental → Aquatic → Sediment	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.27%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.77%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10044162	3300001082	Forest Soil	VGRLVPRWAAFVAAPVVVFLAICSYYAYTRHYRTALGNAAGSPVDSAALQQSTDPQALLGIADHFYWLNNGPAAAP
JGI12635J15846_102909822	3300001593	Forest Soil	VGRLVPRWAAFVAAPVVVFLAICSYYAYTRHYRTALGNAAGSPVDSAALQQSTDPQALLGIADHFYWLNNGPA
JGI12635J15846_103137902	3300001593	Forest Soil	RVPGWAGFVAAPVVVFLTICSYYAYTRHYPTVSGNAASSPVESAALQQSTDPQTLLGTADHFYWLNNGPAAAPHEIGNETIQSLWWI*
Ga0062385_112878262	3300004080	Bog Forest Soil	VVFLTICSYYAYTRHYRTVSGNATASPVDSAVLQHSTDPQALLGIADHFYWLNNGPAAAPLYARAEKLFSERGD
Ga0058899_115642031	3300004631	Forest Soil	MGRPVPRLASFAIASVAAFLIICSYYAYTRQHRTARTSEASSSIDSADPEQSTDPQALLAVADHLYWLNNGPAAAPLYAQAEKLFSERGD
Ga0070706_1020635221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VVFLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSERG
Ga0070732_108687952	3300005542	Surface Soil	VGRCVPVWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNANGSPVDSAVLQQSTDPQVLLGIADHFYWLNNGP
Ga0066661_105722421	3300005554	Soil	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNATDFPVDSAVLQQSTNPQALLRIADHFYWLNNGPA
Ga0070762_105594042	3300005602	Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYVRAEELFSERGDARNELYAKVGRLRSEAETMSFVDLSRFLNEQLQNPIVQTD
Ga0070764_106869761	3300005712	Soil	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASFPVDFAALQQSTDPEALLGFADHFYWLNNGPAAAPLYARAEQLFSERDDARNELHAK
Ga0070717_109942562	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VGRRVPGWAAFVVAVVALLTICGYYAYTRHYRTLSGNTPSSPVDSAAVEHSTDPKALLGIADHFYWLNNGPAAAPFFARAEKRFAAEGDRRNELYAKVGRLRSQAETMSFVDLSRILNEQLQTPIVQ
Ga0075029_1006189971	3300006052	Watersheds	VVFLTICSYYAYTRHYRTVSGNAPGSPIDSAVLQQSTDPQALLGIADHFYWLNNGPAAAPLYARAEELLSERGDARDELHAKVGRLRSEAETM
Ga0075026_1009944151	3300006057	Watersheds	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGSPIDSAVLQQSTDPDALLGIADHFYWLNNGPAARPLYARAEKLFSERGDARNE
Ga0075017_1000134831	3300006059	Watersheds	VGRRVPRWVTFVATPIVAFLTICSYSAYTRHNRTASGSEGHLPTESAVLRQSTDPHALLAAADHFYWLSNGPAAAPLFAKAEELFAAEGDSRNELHAKVGRLRSRAETMSFVDLSRILNEQLQT
Ga0105241_114835351	3300009174	Corn Rhizosphere	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAARSPVDSAVLQQSTDPQALLGVADHFYWLNNGPAAAPLYAKAEKVFSERGDTRNELHAKVGRLRSEAETMSFVDLSRFLNE
Ga0116221_13323022	3300009523	Peatlands Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRYYRTALGNGAGSPIDSAVLQLSTDPQALLGIADHFYW
Ga0116225_12683441	3300009524	Peatlands Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGSPIDSEVLQQSTDPEALLGIADHFYWLNNGPAAGPL
Ga0116138_11050872	3300009552	Peatland	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTALGNAAGFPVDSSVLQQSSDPQALLGIADHFYWLNNGTAAAPLYARAEKLFSERGDARNELHSRVGRLRS
Ga0116133_10300021	3300009623	Peatland	MGRRVPGWAGLVAAPVVLFLTICSYCAYTRHCRTVSGNAAGSPIDFAVLHQSNDPQALLGMADHFYWLNNGPAAMPLYARAEKLFSERGDARNEL
Ga0116135_11903231	3300009665	Peatland	MGRRVPGWAGLVAAPVVLFLTICSYCAYTRHCRTVSGNAAGSPIDFAVLHQSNDPQALLGMADHFYWLNNGPAAAPLYTRAEKLFSERGDA
Ga0116217_109934811	3300009700	Peatlands Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGSPIDSAVLQQSTDPQALLGIADHFYWLNNGPAAAP
Ga0136449_1007490851	3300010379	Peatlands Soil	MGRRVPGWAGFTVAPVVVFLTICTYYAYTRHHRAVSANATGSPINLAILLQSTDPQALLSVANHFYWLNNGPAAGPLFARAEKLFAAEGDSRNELYAKVGRL
Ga0136449_1022489521	3300010379	Peatlands Soil	MGRRVPGWTGFIAAPVVVFLTICFYYAYTRHCRTVSGNASGSRIDSAVLQQSNDPQALLGMADHFYWLNNGPAAAPLYARAEKLFSERGDVRNELHAKVGRLRSEAETM
Ga0136449_1035159851	3300010379	Peatlands Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGSPIDSEVLQQSTDPEALLGIADHFYWLNNGPAAAPLYARA
Ga0150983_166145231	3300011120	Forest Soil	MGRPVPRWASFAIASVAAFLIICSYYAYTRQHRTARASEASSSIDSADPEQSTDPQALLAVADHLYWLNNGPAAAPLYAQAEKLFSERGDARNELH
Ga0137389_116478382	3300012096	Vadose Zone Soil	MGRRVPAWAGLAAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPQALLSSADHFYWLNNGPAAAPLYARAENLFSERGDTRNELHAKVGRLRSE
Ga0137382_112390271	3300012200	Vadose Zone Soil	VVAPTVVFLTICSYYAYTRHYRTASGNAASSPVNSAALQQSTDPQALLSAADHFYWLNNGPAATPLYARAEKLFSERGDARNELFAKVGRL*
Ga0137362_106149101	3300012205	Vadose Zone Soil	VVFLTVCSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSERGDA
Ga0137385_116416281	3300012359	Vadose Zone Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTCHYRTAFGNAASSPVNSAALKLSTDP
Ga0137361_110499381	3300012362	Vadose Zone Soil	MGGRVPRWAGFVAAPTVVFLTICSYYAYTRHYRTASGNAASSPVNSSALQQSTDPHALLSAADHFYWLNNGP
Ga0137416_112682391	3300012927	Vadose Zone Soil	VVFLTICSYYAYTRHYRTVSGNAAGSLVDSAVLQRSTDPQALLGIADHLYWVNNGPAAAPLYARSEKLFSERGDTGNELHAKIGRLRSEAETMSFVDLSRFLNEQLQNPIVQ
Ga0164304_114751401	3300012986	Soil	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTALGNATGSHVDSAVLQQSTDPQALLGIADHFYWLNNGPAAAPLYARAEKLFSERGDARNELHSKVGRLRS
Ga0181518_103585801	3300014156	Bog	VGRRVPRWAGFVVAPVVVFLTICSYCAYSRHYRTALGNAAGFPVDSSVLQQSSDPQALLGIADHFYWLNNGPAAGPLYARAEKLFSERGAARNELYAKVGHLRSLAETMSFVDLSRILNE
Ga0181518_103642722	3300014156	Bog	VVFLTICSYYAYTRHYRTALGNAAGSPIDSAVLQLSTDPQALLGTADHFYWLNNGPAAAPLYARAEKLFSERG
Ga0181521_104964802	3300014158	Bog	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGSPVDSAALQQSTDPQALLGIADHFYWLNNGPAAAPLYARAEKLFSERSDTRNELHAKVGRLRSEAETMSFVDLSRFL
Ga0181517_106301401	3300014160	Bog	VVFLTICSYYAYTRHYRTAFGNAAGSPVDSAVLQQSNDPQALLGTADHFYWLNNGPAAAPLYARAEKLF
Ga0181538_102779012	3300014162	Bog	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTALGNAAGSPIDSGVLQRSTDPEALLGIA
Ga0182016_104306602	3300014493	Bog	MGRRVPGWASFLAAPVVVFLTICSYYVYTRHYRTGNAVGSPIDSAILQQSTDPQALLGIADHFYWLNNGPAAAPLYARAE
Ga0182024_106621812	3300014501	Permafrost	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGYPIDTAVLQQSTDPEALLGIADHFYWLNNG
Ga0182021_108357121	3300014502	Fen	VVFLTICSYYAYTRHYRTALGNATGSSIDSAVLQLSTDPEALLGIADHFYWLNNGPAAAPLYARAEKLFSERGDTRNELH
Ga0181522_107264632	3300014657	Bog	MGRRVPGWAGFVAAPVVVFLTIGSYYAYTRHYRTVSDHAVGSPVDSAVLQQSTDPQVLLGIADHFYWLSNGPAAAPLYARAE
Ga0182030_100810841	3300014838	Bog	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGSPIDSEVLQQSTDPEALLGIADHFYWLNNGPAAAPLYARAEKLFSERSDARNELHAK
Ga0187818_103284561	3300017823	Freshwater Sediment	VGRRVPGWAAFVAAPVVVFLTICSYYAYFRHYRTASGNAAGSPVDSAVLQQSTDPEALLGIADH
Ga0187856_11770121	3300017925	Peatland	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHHRAVSGNAAGSPIDSAVLQLSTDPQALLGIADHFYWLNNGPAATPLYARAEKLFSERGDA
Ga0187806_13692171	3300017928	Freshwater Sediment	VGRGVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAATSPVDSAALQQSSDPQALLSSADHLYWLNNGPAATPLYARAEKLFSERGDARNELYAKVG
Ga0187853_102524561	3300017940	Peatland	VGRRVPRWAGFVAAPVVVFLAICSYYAYTRHYRTVSGNLAGSPVDSAVLQQSTDPQVLLDIADHFYWLNNGTAAAP
Ga0187879_102569841	3300017946	Peatland	VGRRVPGWASFVVAPVVVFLTICSYYAYTRHYRTALGNAAGSPIDSAVLQRSTDPEALLGIADHFYWLNNGPAAAPLYARAEKLFSERGDARNELHAKVGRLRS
Ga0187868_13114211	3300018002	Peatland	MGRRVPGWASFVVAPVVVFLTICSYYAYTRHYRTALGNAAGSPIDSAVLQLSTDPQALLGTADHFYWLNNGPAAAPLYARAEQLLSERGDARN
Ga0187804_104786401	3300018006	Freshwater Sediment	VSRRVPGWAGYVAAPVVVFLTICSYYAYSHHYRTVSGKAASSPVDSAVLQQSTDPEALLRVADHLYWLNNGPAAAPLYARAEQLFSERSDA
Ga0187889_102756201	3300018023	Peatland	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGFPVDSTVLQQSTDPQALLGTADHFYWLNNGPAAAPLYAKAEKLFSERSDARNELHAKVGRLRSEAETMSF
Ga0187869_103382352	3300018030	Peatland	MGRRVPGWAGFAVAPVVVFLTICSYYVYIRHYRAVSGNATGSPINSAVLLQSTDPQVLLGIANHFYW
Ga0187875_104967401	3300018035	Peatland	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGFPVDSAVLQQSTDPQALLGIADHFYWLNNGPAAAPLYARAEKLFSE
Ga0187887_103478561	3300018043	Peatland	VVFLTICSYCAYTRHRTVSGNAAGSELDAAHLQQSTDPLPLLAVADHFYWLNNGPAAAPLYARAEKLFSERGDARNELDAKVGRLRSEAEMMSFVDLSRI
Ga0187890_101251111	3300018044	Peatland	MGRGVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPQVLLSFADHFY
Ga0187859_105248311	3300018047	Peatland	VSRRVPGWAGFVAAPIVVFLTICSYYAHTVHHRTGSGNATGSPVDSAVLQQSTDPQALLRIADHFYWLNNGPAAAPLYARAENLF
Ga0187784_112624531	3300018062	Tropical Peatland	MGRRVPGWAVFVAAPVAVLLTICSYYAYIRHYRTVSSNAAGSPVDSAVLQPSTDPQALLDIADHFYWLSNGPAAAPLYSRAEKLFSERG
Ga0187770_111899661	3300018090	Tropical Peatland	MGGRVPRWASFVVAPIMVFLAICSYYAYTRHYRSVSGSAARSVVDSTRLQQSIDPQELL
Ga0066667_122662061	3300018433	Grasslands Soil	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYPTVSGNASGSPGDSAVLQQSTDPEALLGIADHFYWLNNGPAAAPIYARAEKLLSERGDSRNELYATVGSDRSEAQTMAFV
Ga0210399_107020562	3300020581	Soil	MGRPVPRLASFAIASVAAFLIICSYYAYTRQHRTARTSEASSSIDSADPEQSTDPQALLTVADHLYWLNNGPAAAPLYAKAEKLFSERADARNELHAKVGR
Ga0210401_103416793	3300020583	Soil	MGRRVSGWAGSVAAPVVVFLTICSYYACTRYYRTVSGNAARSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSERGDARN
Ga0210406_113515681	3300021168	Soil	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTLSSNAAGSPVDSAVIQQSTDPQALLGIADHFYWLNNGPAAAPLYARAEKLFSERGDARNELH
Ga0210400_100231671	3300021170	Soil	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAVLQQSTDPQALLSSADHFYWLNNGP
Ga0210405_100893024	3300021171	Soil	MGRPVPRWASFAIASVAAFLIICSYYAYIRQHRTARASEASSSIDSADPEQSTDPQALLAVADHLYWLNNGPAAAPLYAQAEKLFSERGDARNELHAKVGRLRSEAET
Ga0210396_112144871	3300021180	Soil	LVAAPVVVFLTVCSYYAFTRFYRTASGNPGGSGIDSAVLQQSLDPQALLGIADHFYWLNNGPAAAPLYASAEKLFSNRGDARNELHA
Ga0210383_100773458	3300021407	Soil	VGGRVPRWAAFVVAPTVVFLTICSYYAYTRHYRTVSGNAAGSPVDSAVLQQSNDPQALLSSADHFYWLNNGPAATPLYARAEKLFSERGDA
Ga0210383_113897701	3300021407	Soil	MGRRVPGWACFVAAPVVVFLTICSYYAYTRHYRTVSGYAAGSPVDSAVLQQSSDPQALL
Ga0210384_106685602	3300021432	Soil	MGRRVSGWAGSVAAPVVVFLTICSYYACTRYYRTVSGNAASSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYA
Ga0210391_115499661	3300021433	Soil	VSRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNATGSPVDSAVLQQSTDPQALLSTADHFYWLNNGPAAAPLYARA
Ga0210390_113105271	3300021474	Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASFPVDSAALQQSTDPEALLGFADHF
Ga0210410_100480011	3300021479	Soil	MGRRVRGWAGLVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAAPQQFTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSERGDARNEL
Ga0210409_104154483	3300021559	Soil	VGKRVPGWASFVAAPVVVFLTICSYYAYTRHYRAVSGNAASSPVDSAALQQSTDPKALLGIADHFYWLNNGPAAAPI
Ga0224544_10013312	3300023250	Soil	VGRRIPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPRTLLGFADHFYWLNNGPAAAPLYARAEKLFSERGDARNELYASPIPWAMDEA
Ga0179589_105254841	3300024288	Vadose Zone Soil	VAAPVVVFLAICSYCAYTRHRTVSGNAAGSAVDSADLQQSTDPLPLLAAADHFYWLNNGPAAAP
Ga0208194_10345671	3300025412	Peatland	MGRRVPGWAGLVAAPVVLFLTICSYCAYTRHCRTVSGNAAGSPIDFAVLHQSNDPQALLGMADHFYWLNNGPAAAPLYTR
Ga0208732_10265961	3300026984	Forest Soil	VGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPFDSAALQQSTDPKALLGIADHFYWLNNGPAAAPLYAGAEKLFSERGDKRSELHAKVGRLRSEAETMSFVDL
Ga0209221_11353212	3300027609	Forest Soil	VGRRVPGWRGFVAASVVVFLTICSYYAYTRHYRTASGNVAGSSVDSAALQQSTNPQVLLAAADHFY
Ga0209908_101749441	3300027745	Thawing Permafrost	RIPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPRTLLGFADHFYWLNNGPAAAPLYARAEKLFSERGDARNELYASPIPWAMDEA
Ga0209579_100656961	3300027869	Surface Soil	VGGRVPGWAAFLAAPVVVLLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSERGDARNELYAK
Ga0209380_104368281	3300027889	Soil	VGKRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGDTAGFPIDSAVLQQSTDPEALLGIADHFYWLNNGPAAAPLYARAEQ
Ga0308309_103872103	3300028906	Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPIDSAALQQSTDPQALLSSADHFYW
Ga0222749_102580912	3300029636	Soil	MGRRVSGWAGSVAAPVVVFLTICSYYACTRYYRTVSGNAARSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSER
Ga0222749_105772881	3300029636	Soil	MGRRVPGWACFVAAPVVVFLTICSYYAYTRHYRTVASNAASSPVDSAALKQSTDPQALLSSADHFYWLNNGPAATPLYARAEKL
Ga0246001_10650931	3300029889	Peat	MGRGVPGWAGFVAAPVVVFLTICSYYAYTHHYRTVSGNAAGSPIDSAVLQESTDPEALLRIADHFYWLNNGPAAAPLYA
Ga0311369_111142151	3300029910	Palsa	VVFLTICSYYAYTHHHRTALGNAAGSPVDSVALQQSTDSQALLGTADHFYWLNNGPAAAPLYARAEKL
Ga0302188_101687941	3300029986	Bog	VGRRVPGWASFVVAPVVVFLTICSYYAYTRHYRTVSGNAAGSPIDSEVLQQSTDPEAL
Ga0311338_106852171	3300030007	Palsa	VGRRVPGWAGFAAAPVVVFLTICSYYAYTHHHRTALGNAAGSPVDSVALQQSTDSQALLGTADHFYWLNNGPAAAPLYARAEKLFSDRRDTRNELHAKVGRLRSQAETMSFVDLSRFLDE
Ga0311338_107467791	3300030007	Palsa	VGRRVPGWASFVVAPVVVFLTICSYYAYTRHYRTALGNATGSSIDSAVLQLSTDPQALLGIADHFYWLNNGPAAAPIYARAEK
Ga0311353_111576041	3300030399	Palsa	VGRRVPGWAGFVAAPVVVLLTICSYCAYTRHRTVSGNAAGSAVDSADLQQSTDPLPLLAVADHFYWLNNGPAAAPLYARAEKLFSERGDARNELHAK
Ga0311370_116418991	3300030503	Palsa	VGRRVPRWAAFVAAPVVVFLALCSYYAYTRHYQAALGNAAGSPVDSEVLQRSTDPQALLGIADHFYWLNNGPAAAPIYARAEKLFSDRGDARNELYAKVG
Ga0311354_110794451	3300030618	Palsa	VGRRVPRWAAFVAAPVVVFLALCSYYAYTRHYQAALGNAAGSPVDSEVLQRSTDPQALLGIADHFYWLNNGPAAAPIYARAEK
Ga0265763_10151661	3300030763	Soil	MGRPVPRWASFAIAPVAAFLIICSYYAYTRQHRTARASEASSSIDSADPKQRTDPQALLAVADHLYWLNNGPAAAPLYAQAEKLISERGDARNELHAKVGRLRSEAETMSF
Ga0265753_11201801	3300030862	Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAASSPVDSAALQQSTDPQALLSSADHFYWLNNGPAAAPLYARAEKLFSERGDPRNELHSKVGR
Ga0265771_10277422	3300031010	Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYQTVSGNAASSPVDSAALQQSTDPQALISSADRFYWLNNGPA
Ga0302180_100381811	3300031028	Palsa	VVFLTICSYYAYTHHHRTALGNAAGSPVDSVALQQSTDSQALLGTADHFYWLNNGPAAAPLYARAEKLFSDRRDTRNELHAKVGRLRSQAETMSF
Ga0170834_1125207451	3300031057	Forest Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAARSPVDSAALQQSTDPQALLGVAD
Ga0170824_1133059802	3300031231	Forest Soil	VGRRIPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGYAAGSPFDSAVLQQSTDPQALLGIADHFYWLNNGPAAVPLYARAEKLFSERGDARNELHAKVGRLRSEAETM
Ga0302318_102023521	3300031258	Bog	VGRRVPGWASFVVAPVVVFLTICSYYAYTRHYRTALGNGAGSPIDSAVLQLSTDPQALLGTADHFYWLNNGPAAVPLYARAEKLFSERGDARNELHAKVGR
Ga0170819_134319032	3300031469	Forest Soil	VVFLTICSYYAYTRHYRTVSGNATGSPVDSAVLEQSTDPQALLGIADHFYWLNNGPAAAPLYARAEKLFLER
Ga0302326_103133181	3300031525	Palsa	VGRRIPGWAGFVAAPVVVFLTICSYYAYTRHNRTVSGNAAGSPIDSAVLQQSTDPQALLGVADHFYWLNNGPAAAP
Ga0302326_106555581	3300031525	Palsa	MGRRVPAWAGLAAAPVVVFLTICSYYAYTRHYRTVSGDTAGFPIDSAVLQQSTDPEALLGIADHFYWLNNGPAAAPLYARAEQLFPERDDARNELHAKVGQLRSEA
Ga0307477_107651281	3300031753	Hardwood Forest Soil	VGRRVPGWAGFVATPVVVFLTICSYYAYPRHYRTVSGNATSSPVDSTALQRSTDPQARLGIADHFYWLNNGPAAAPFYARAEKLFSERGDARNELHAKVGRLRSEAETRPEGPLPSIYSA
Ga0307475_102095621	3300031754	Hardwood Forest Soil	VARRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNATGSPVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSE
Ga0302319_115394641	3300031788	Bog	VGRRVPGWCGFVAASVVVFLTICSYYAYTRHYRIASGNVAGSSVDSAALQQSTNPQVLLAAADHFYWLNNGPASAPLFAS
Ga0307478_102514522	3300031823	Hardwood Forest Soil	VARRVPGWAGFVAAPVVVFLTICSYHAYTRHYRTVSGNAASSSVDSAALQQSTDPQALLSSADHFYWLNNGPAATPLYARAEKLFSERGD
Ga0307479_112468521	3300031962	Hardwood Forest Soil	VSPSGWEWLLPSYYFYSRFHRTFAFNALSSAHAIHDPETSRDPKALLAEATQLYWLSNGPKAAPLFAKAEELFAAEGDTRNEIYAKVGRLRSQAETMSFVDLSRILNEQLQTPIVQKDSRLRL
Ga0311301_116948651	3300032160	Peatlands Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTASGDVAGSFVDSAGLQQSTDPQ
Ga0311301_129624431	3300032160	Peatlands Soil	VGRRVPRWAAFVAAPVVVFLAICSYYAYTRHYHTALGNAAGSPVDSAVLQQSTDPQALLGIADHFYWLNNGPAAG
Ga0335079_112188151	3300032783	Soil	VGKRVPGWAGFVATPVVVLLTICSYYAYTRHYRTSGNATGSPVDSAVLQQSADPKALLGIADHFYWLNNGPAAAPLFARAEKLFAAEGDSRNELYAKVGRLRSQAETMSFVDLSRILNEQLQTPLVKND
Ga0335078_116505142	3300032805	Soil	VVAPTVVFLTICSYYAYTRHYRTASGNAASSPVNSAALQQSTDPQALLSAADHFY
Ga0335072_109024731	3300032898	Soil	MGRRVPAWAGFAVAPVVVFLTICSYYSYTRHYQAVSGNATGSPINSAALLQSTDPQALLGIANHFYWLNNGPAAGPLFARAEKLFAAEGDSRNELYAKVGRLRTQAETM
Ga0335076_110818151	3300032955	Soil	VRESVPRWVPFAAAPVVFLTICSYYAYTRHYRPVPGNGTGPPIPSVVLQRSTDPKALLGIADHFYWLSNGPAAAPLYARAEKLFAAEGDSRNEIYAKVGRLRSQAETMS
Ga0335076_118127571	3300032955	Soil	VGKRVPGWAGFVATPVVVLLTICSYYAYTRHYRTSGNATGSPVDSAVLQQSADPKALLGIADHFYWLNNGPTAAPIYAKAEKLFAAEGDSRNELYAKVGRLRSQAETMSFVDLSRILYEQ
Ga0334828_092260_3_188	3300033822	Soil	MGRRVPGWAGFVAAPVVVFLTICSYYAYTRHYRTVSGNAAGSPIDSEVLQQSTDPEALLGIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083353

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences