Metagenome / Metatranscriptome Family F083337

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083337
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	50 residues
Representative Sequence	MPRIPIFRLGGAPDKPALPKLAASTPSVSLEGLSVGVDNLRHDVVLSP
Number of Associated Samples	96
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.82 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.805 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (12.389 % of family members)
Environment Ontology (ENVO)	Unclassified (22.124 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.982 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04389	Peptidase_M28	23.89
PF00483	NTP_transferase	3.54
PF01850	PIN	2.65
PF01230	HIT	1.77
PF02687	FtsX	0.88
PF13451	zf-trcl	0.88
PF00730	HhH-GPD	0.88
PF01165	Ribosomal_S21	0.88
PF13231	PMT_2	0.88
PF04014	MazE_antitoxin	0.88
PF03795	YCII	0.88
PF04185	Phosphoesterase	0.88
PF01029	NusB	0.88
PF00578	AhpC-TSA	0.88
PF00085	Thioredoxin	0.88
PF11412	DsbC	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.88
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.88
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.88
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.88
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.88
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.88
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.81 %
Unclassified	root	N/A	6.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.81 %
Unclassified	root	N/A	6.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.81 %
Unclassified	root	N/A	6.19 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.07 %
Unclassified	root	N/A	6.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	42.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	36.28 %
Unclassified	root	N/A	6.19 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	42.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.28 %
Unclassified	root	N/A	6.19 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.28 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	25.66 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.81 %
Unclassified	root	N/A	6.19 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.28 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	25.66 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	11.50 %
Unclassified	root	N/A	6.19 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.28 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	25.66 %
Unclassified	root	N/A	6.19 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.42 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.28 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	25.66 %
Unclassified	root	N/A	6.19 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.42 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10805413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	538	Open in IMG/M
3300001867\|JGI12627J18819_10033667	All Organisms → cellular organisms → Bacteria → Acidobacteria	2126	Open in IMG/M
3300002245\|JGIcombinedJ26739_100832664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	804	Open in IMG/M
3300002245\|JGIcombinedJ26739_101657470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	538	Open in IMG/M
3300004080\|Ga0062385_11124537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	533	Open in IMG/M
3300004082\|Ga0062384_100406723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	878	Open in IMG/M
3300004091\|Ga0062387_100819868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	695	Open in IMG/M
3300005177\|Ga0066690_10524592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	795	Open in IMG/M
3300005332\|Ga0066388_100989829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1406	Open in IMG/M
3300005336\|Ga0070680_100778036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	824	Open in IMG/M
3300005533\|Ga0070734_10124650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1504	Open in IMG/M
3300005534\|Ga0070735_10422802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	797	Open in IMG/M
3300005534\|Ga0070735_10757234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	573	Open in IMG/M
3300005541\|Ga0070733_10791515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	637	Open in IMG/M
3300005764\|Ga0066903_106630096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005883\|Ga0075299_1027059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	599	Open in IMG/M
3300005950\|Ga0066787_10068362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300005952\|Ga0080026_10015824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1799	Open in IMG/M
3300006052\|Ga0075029_100027421	All Organisms → cellular organisms → Bacteria → Proteobacteria	3217	Open in IMG/M
3300006052\|Ga0075029_100277889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1064	Open in IMG/M
3300006086\|Ga0075019_10646161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300006163\|Ga0070715_10044257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1881	Open in IMG/M
3300006175\|Ga0070712_100747997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	836	Open in IMG/M
3300006797\|Ga0066659_10864724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300006800\|Ga0066660_10886454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300006806\|Ga0079220_12042490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300006854\|Ga0075425_102078251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300007982\|Ga0102924_1346190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300009012\|Ga0066710_100061698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4737	Open in IMG/M
3300009616\|Ga0116111_1121364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300009672\|Ga0116215_1166797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300010043\|Ga0126380_10857193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	750	Open in IMG/M
3300010046\|Ga0126384_10306917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307	Open in IMG/M
3300010358\|Ga0126370_12344235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010360\|Ga0126372_12595075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300010376\|Ga0126381_101508730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	971	Open in IMG/M
3300010376\|Ga0126381_104426490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	543	Open in IMG/M
3300010379\|Ga0136449_101728782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300012189\|Ga0137388_11101072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	731	Open in IMG/M
3300012207\|Ga0137381_10603460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300012357\|Ga0137384_10033338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4236	Open in IMG/M
3300012929\|Ga0137404_10702118	All Organisms → cellular organisms → Bacteria → Acidobacteria	915	Open in IMG/M
3300012971\|Ga0126369_10254812	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300012988\|Ga0164306_11133863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	652	Open in IMG/M
3300013296\|Ga0157374_12004993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300015374\|Ga0132255_100659731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1551	Open in IMG/M
3300017823\|Ga0187818_10070334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1507	Open in IMG/M
3300017823\|Ga0187818_10479366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	557	Open in IMG/M
3300017924\|Ga0187820_1125116	Not Available	757	Open in IMG/M
3300017924\|Ga0187820_1167384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	670	Open in IMG/M
3300017924\|Ga0187820_1293269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300017933\|Ga0187801_10129257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	974	Open in IMG/M
3300017936\|Ga0187821_10355561	Not Available	592	Open in IMG/M
3300017942\|Ga0187808_10377980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	646	Open in IMG/M
3300017955\|Ga0187817_10328061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	976	Open in IMG/M
3300017955\|Ga0187817_10793460	Not Available	605	Open in IMG/M
3300017955\|Ga0187817_10930783	Not Available	556	Open in IMG/M
3300017961\|Ga0187778_10114338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1684	Open in IMG/M
3300017970\|Ga0187783_10269153	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300018006\|Ga0187804_10410411	Not Available	601	Open in IMG/M
3300018007\|Ga0187805_10052997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1823	Open in IMG/M
3300018007\|Ga0187805_10441581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	606	Open in IMG/M
3300018043\|Ga0187887_10775856	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300018085\|Ga0187772_10933440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300018085\|Ga0187772_11151158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300018085\|Ga0187772_11271488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300018085\|Ga0187772_11359928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	526	Open in IMG/M
3300018090\|Ga0187770_10397293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300018090\|Ga0187770_11016862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300020579\|Ga0210407_11293804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300021168\|Ga0210406_10298701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1310	Open in IMG/M
3300021170\|Ga0210400_10598542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300021432\|Ga0210384_11277687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	639	Open in IMG/M
3300021475\|Ga0210392_10495380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	900	Open in IMG/M
3300021479\|Ga0210410_10690869	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300021479\|Ga0210410_10810234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300021560\|Ga0126371_13436155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	535	Open in IMG/M
3300025910\|Ga0207684_11251031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300025928\|Ga0207700_10715721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	894	Open in IMG/M
3300026004\|Ga0208416_1011772	Not Available	677	Open in IMG/M
3300026078\|Ga0207702_12441340	Not Available	510	Open in IMG/M
3300026300\|Ga0209027_1063967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1371	Open in IMG/M
3300026304\|Ga0209240_1145037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300027505\|Ga0209218_1137450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027568\|Ga0208042_1057558	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300027625\|Ga0208044_1144500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300027729\|Ga0209248_10258751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	506	Open in IMG/M
3300027745\|Ga0209908_10112242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	685	Open in IMG/M
3300027842\|Ga0209580_10292843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	810	Open in IMG/M
3300027853\|Ga0209274_10455428	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027898\|Ga0209067_10826038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300027908\|Ga0209006_10589617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300027986\|Ga0209168_10290693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	804	Open in IMG/M
3300028536\|Ga0137415_11347575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300028792\|Ga0307504_10113554	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300029636\|Ga0222749_10553857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	626	Open in IMG/M
3300030503\|Ga0311370_11032760	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300030878\|Ga0265770_1023207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	998	Open in IMG/M
3300030991\|Ga0073994_10047783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1239	Open in IMG/M
3300031090\|Ga0265760_10230003	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031231\|Ga0170824_100454029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	820	Open in IMG/M
3300031231\|Ga0170824_121218506	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031708\|Ga0310686_116633464	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300031712\|Ga0265342_10361247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	755	Open in IMG/M
3300031715\|Ga0307476_10329050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1123	Open in IMG/M
3300031715\|Ga0307476_10736651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	730	Open in IMG/M
3300031718\|Ga0307474_11095668	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	630	Open in IMG/M
3300031879\|Ga0306919_11029981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	629	Open in IMG/M
3300031938\|Ga0308175_100492696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300031962\|Ga0307479_10385897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1385	Open in IMG/M
3300032205\|Ga0307472_100062059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2394	Open in IMG/M
3300032955\|Ga0335076_10096123	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300033004\|Ga0335084_11510520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.45%
Aquatic	Environmental → Aquatic	22.12%
Plants	Host-Associated → Plants	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.57%
Freshwater	Environmental → Aquatic → Freshwater	17.70%
Sediment	Environmental → Aquatic → Sediment	3.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.27%
Loam	Environmental → Terrestrial → Soil → Loam	12.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.04%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	12.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	12.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.08%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026004	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_108054133	3300001593	Forest Soil	MPRIPIFRLGGAPDKSEAPKLTAATPSVSLEGISVGVDNLRHDVVLSPRFVELGRAQVAR
JGI12627J18819_100336671	3300001867	Forest Soil	MPRIPIFRLGGAPEKPDLPNLAASTPFVSLEGLTVGVDN
JGIcombinedJ26739_1008326642	3300002245	Forest Soil	MPRIPIFRLGGAPDKSDAPKLAAATPSVSLEGISVGVDNLRHDVVLSPRFVELGRAQ
JGIcombinedJ26739_1016574703	3300002245	Forest Soil	MPRIPIFRLGGAPEKPALPTLATSTPVVALEGISVGVDNLRHDVVLSPRFVELAR
Ga0062385_111245372	3300004080	Bog Forest Soil	LPRIPIFRLGGTPEVVALPELVSSTPTVIMEGLAVGVDNLRHDV
Ga0062384_1004067232	3300004082	Bog Forest Soil	MPRLPIFRLGSAPEKQALPNLMASTPFVSLEGLSLGVDNLRHDVVLSPRFVEAARAHLARLI
Ga0062387_1008198682	3300004091	Bog Forest Soil	MPRLPIFRLGGAPEKPALPNLAASTPFVSLEGLSVGVDNLRHDVVLSARFV
Ga0066690_105245922	3300005177	Soil	MPRIPIFRLGGASQRGALPELLAFAPSVSLQGLSVGVDNLRHDVVLS
Ga0066388_1009898293	3300005332	Tropical Forest Soil	MPRIPIFRLGGSPEKPELPNLAASTPFVSLEGLNVGVDNLR
Ga0070680_1007780363	3300005336	Corn Rhizosphere	MPKIPIFRLGGRPDKPALPKLAASTPLVALDGISVGVDNLRHDVVLSPKFAELVRAQI
Ga0070734_101246501	3300005533	Surface Soil	MPRLPIFRLGGAPEKPALPNLAASTPFVSLEGLSVGVDNLRHDVVLST
Ga0070735_104228022	3300005534	Surface Soil	MPRIPIFRLGGAPEKPAAPNLAASTPFVSLEGLSVGVDNLRHDVLL
Ga0070735_107572341	3300005534	Surface Soil	MPRIPIFRLGGASDKPAPPKLASSIPSVSLEGIAVGVDNLRHDVVLSPRVV
Ga0070733_107915151	3300005541	Surface Soil	MPRLPIFRLGGSPDKPALPNLSASTPFVSLEGLMVGVDNLRHDVVLSPRFVELARAQITRLIA
Ga0066903_1066300961	3300005764	Tropical Forest Soil	MPRIPIFRLGGAPEKPALPNLAAATPFVSLEGLTVGVDNLRHDVVLSPKFVELARAQIAR
Ga0075299_10270591	3300005883	Rice Paddy Soil	MPKIPIFRLGGRPDKPALPNLDASTPVVLLEGIPVGVDNLRHDVVLSPKFAELARA
Ga0066787_100683621	3300005950	Soil	MPRLPIFRLGGAPEKPAPPNLAASTPFVSLEGISVGVDNLR
Ga0080026_100158241	3300005952	Permafrost Soil	MPRLPIFRLGGAPDKPELPSLAASTPFVSLEGLSVGVDNLRHDVVLSARF
Ga0075029_1000274213	3300006052	Watersheds	MPRIPIFRLGGAADKPAPPNLASSTPFVSLEGLCLGVDNLRHDVY
Ga0075029_1002778891	3300006052	Watersheds	MPRIPIFRLGGAPEKPTLPDLAAATPSISLEGLSVGVDNLRHD
Ga0075019_106461612	3300006086	Watersheds	MPRIPIFRLGGAPDKPALPNLASSTPFVSLEGLCLGVDNLRHDVYLSPR
Ga0070715_100442571	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIPIFRLGGTPEKPELPNLSASTPFVSLEGLTVGVDNLRHDVVLSPKFMELGRAQIAR
Ga0070712_1007479972	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLPIFRLGGAPDKPKLPSLAASTPSISLEGLSVGVDNLRHDVVLSQRFVEMGRAQVVR
Ga0066659_108647241	3300006797	Soil	MPKIPIFRLGGRPDKAALPKLAASVPAFVLEGIAVGVDNLRHDVVLSPKFSELSRIHIA
Ga0066660_108864543	3300006800	Soil	MPRIPIFRLGGAPDKAPLPELAAGAPSLSLEGLSVGVD
Ga0079220_120424902	3300006806	Agricultural Soil	MPRIPIFRLGGSSDKPALPNLSASTPCVALEGLMVGVDNLRHDVVL
Ga0075425_1020782511	3300006854	Populus Rhizosphere	MPRLPIFRLGGAPEKPAHPSLSASTPFVALDGLSVGVDNLRHDVVLSP
Ga0102924_13461901	3300007982	Iron-Sulfur Acid Spring	MPRIPIFRLGGAPDKPALPNLAASTPFVSLEGISVGVDNLRHDVLL
Ga0066710_1000616988	3300009012	Grasslands Soil	MPRIPFFRLGQAPETPGLPALAESALSISLEGLSVGVDNLRHDVALSPRF
Ga0116111_11213642	3300009616	Peatland	MPRIPIFRLGGAPDKPALPNLAASTPSISLERLSVGVDNLRHDVVLSPRFVELGRAQIAR
Ga0116215_11667971	3300009672	Peatlands Soil	MPRIPIFRLGGAPERPAPPNLAASTPFVSLEGISVGVDNL
Ga0126380_108571931	3300010043	Tropical Forest Soil	MPRIPIFRLGGTPEKPELPNLSASTPFVSLDGLTVGVDNLRHDVVLSPKFVELARAQIAR
Ga0126384_103069171	3300010046	Tropical Forest Soil	MPRIPIFRLGGSSDKPALPNLSASTPYVSLEGLMVGVDN
Ga0126370_123442352	3300010358	Tropical Forest Soil	MPRLPIFRLGGAPDKPALPNLAASTPFVSLEGLSVGVDNLR
Ga0126372_125950751	3300010360	Tropical Forest Soil	MPRIPIFRLGGAPEKPELPNLAASTPFVSLEGLTVGVDNLRHDVVLSPKFVELARLQ
Ga0126381_1015087301	3300010376	Tropical Forest Soil	MPRIPIFRLGGSSDKPALPNLSASTPFVALEGLMVGVDNLRHDVVLSPRFVELA
Ga0126381_1044264901	3300010376	Tropical Forest Soil	MPRIPIFRLGGAPEKPELPNLSASTPFISLEGITVGVDNLRHDVLL
Ga0136449_1017287821	3300010379	Peatlands Soil	MPRIPIFRLGGAPDKPALPNLAASTPSISLERLSVGVDNLRHDVVLSPRFVE
Ga0137388_111010722	3300012189	Vadose Zone Soil	MPRIPFFRLGQAPETPGLPLLAESALSISLEGLSVGVDNLRHDVALSPRFLDAARAQMVR
Ga0137381_106034603	3300012207	Vadose Zone Soil	MPRIPIFRLGGAPDKPTLPNLAASTPFVSLEGLSVGVDNLRHDVVLSPRFVELARV
Ga0137384_100333381	3300012357	Vadose Zone Soil	MPRIPFFRLGQAPETPGLPALAESALSISLEGLSVGVDNLRHDVALSPRFLDAARAQMARLVVRH
Ga0137404_107021182	3300012929	Vadose Zone Soil	MPRIPIFRLGGASETSGPPDLAVSTPSISLEGLTVGVDNIRHDVVLSPRFMDTGRA*
Ga0126369_102548121	3300012971	Tropical Forest Soil	MPRIPIFRLGGSPEKPELPNLAASTPFVSLEGLNVGVD
Ga0164306_111338632	3300012988	Soil	MPKIPIFRLGGRPDKPALPKLAASTPLVALAGISVGV
Ga0157374_120049932	3300013296	Miscanthus Rhizosphere	MPRIPIFRLGGAPDTQAPPHLAASTPFVSLEGISVGVDNLRHDVVLSPK
Ga0132255_1006597311	3300015374	Arabidopsis Rhizosphere	MPRIPIFRLGGTPEKPELPNLSASTPFVSLEGLTVGVDNLR
Ga0187818_100703343	3300017823	Freshwater Sediment	MPRIPIFRLGGAPDTPTPPTLIASTPFISLEGISVGVDNLRHDVLLSP
Ga0187818_104793661	3300017823	Freshwater Sediment	MPRIPIFRLGGTPEKPALPNLSASTPFISLEGIMVGVDNLRHDVVLSPRFVELA
Ga0187820_11251162	3300017924	Freshwater Sediment	MPKIPIFRLGGRPDKPALPSLSASTPFIALEGISVGVD
Ga0187820_11673842	3300017924	Freshwater Sediment	MPRIPIFRLGGAPERSELPNLSASTPFVSLEGLTVGDNLRHDVVLS
Ga0187820_12932691	3300017924	Freshwater Sediment	MPRLPIFRLGGAPDKPGLPSLAASTPSISLEGLSVGVDNLRHDVVLSP
Ga0187801_101292571	3300017933	Freshwater Sediment	MPRIPIFRLGGTPEKPALPNLSASTPFISLEGIMVGVDNLRH
Ga0187821_103555611	3300017936	Freshwater Sediment	MPKIPIFRLGGRPDKPALPSLAASTPFIALEGISVGVDNLRHDV
Ga0187808_103779801	3300017942	Freshwater Sediment	MPRIPIFRLGGAPEKPELPNLSASTPFVSLEGIAVGVDNLRHDV
Ga0187817_103280611	3300017955	Freshwater Sediment	MPRIPIFRLGGAPEKPELPNLSASTPFVSLEGIAVGVDNL
Ga0187817_107934601	3300017955	Freshwater Sediment	MPKIPIFRLGGRPDKPALPNLAASTPFIALEGISVGVDNLRHDVVL
Ga0187817_109307831	3300017955	Freshwater Sediment	MPKIPIFRLGGRPDKPALPNLAASTPFIELEGISVGVDNLRHDVVLSPRFVELARAQ
Ga0187778_101143381	3300017961	Tropical Peatland	MPRLPIFRLGGTPEKPELPELAASAPSISLEGLSLGVDNVRHD
Ga0187783_102691531	3300017970	Tropical Peatland	MPRIPIFRLGGAPEKPALPDLASSTPFVSLDGLSLGVDNLRHDV
Ga0187804_104104111	3300018006	Freshwater Sediment	MPKIPIFRLGGRPDKPALPSLAASTPFIALEGISVGVDNL
Ga0187805_100529971	3300018007	Freshwater Sediment	MPRIPIFRLGGAPEKPELPNLSASTPFVSLEGIAVGVDNLRHDVVL
Ga0187805_104415811	3300018007	Freshwater Sediment	MPRIPIFRLGGAPEKPALPSLAASTPLLSLEGLAVGVDNLRHDVVLSPRVMEAARAHIARLI
Ga0187887_107758561	3300018043	Peatland	MPRIPIFRLGGAPEKPAPPNLAASTPFVSLEGLSVGVDNLRHDVVLSPRFVE
Ga0187772_109334402	3300018085	Tropical Peatland	MPRIPIFRLGGAPEKPALPNLAASTPFVSLEGLTVGVDNLRHDVVLSPKFVELARAQIARLI
Ga0187772_111511581	3300018085	Tropical Peatland	MPRIPIFRLGGAPEKPALPDLAAATPSISLEGVSLGVDNLRHDVVL
Ga0187772_112714881	3300018085	Tropical Peatland	MPRIPIFRLGGAPEKPALPDLTAATPAVSLEGLSLGVDNLRHDVV
Ga0187772_113599282	3300018085	Tropical Peatland	MPRIPIFRLGGTPEKPELPELAASAPSISLEGLSLGVD
Ga0187770_103972931	3300018090	Tropical Peatland	MPRIPIFRLGSAPEKPALPDLAAATPGISLEGLSLGVDNLRHDVVLSS
Ga0187770_110168621	3300018090	Tropical Peatland	MPRIPIFRLGGAPEKPALPNLAASMPFVSLEGLTVGVDNLRHDVVLSPKFVELARAQIARLII
Ga0210407_112938041	3300020579	Soil	MPRIPIFRLGGAPEKPAPPNLAASTPFISLEGISVGVDNLR
Ga0210406_102987013	3300021168	Soil	MPRLPIFRLGGAPDKPALPELLAAAPSITLEGLAVGVDNLRHD
Ga0210400_105985421	3300021170	Soil	MPRIPIFRLGGAPEKPAVPDLASSTPFVSLEGLSLGVDNLRHDVVL
Ga0210384_112776871	3300021432	Soil	MPRIPFFRLGQAPETPGLPALAESALSISLEGLSVGVDNLRHDVALSPRFLDAARAQMA
Ga0210392_104953801	3300021475	Soil	MPRLPIFRLGVAPEKPAPPNLAASTPFVSLDGLSVGVDNLRHDVVLSPKFVELG
Ga0210410_106908692	3300021479	Soil	MPRIPIFRLGASREQPALSKLASATPFISLKGLAVGVDNLRH
Ga0210410_108102341	3300021479	Soil	MPRLPIFRLGGAPDKPELPSLAASTPFVSLEGLSVGVDNLRHDVVLSPKFM
Ga0126371_134361551	3300021560	Tropical Forest Soil	MPRLPIFRLGGAPEKPAHPNLSASTPFVSLDGLSVGVDN
Ga0207684_112510311	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIPIFRLGGAPDKPGLPSLAASTPFISLEGLSVGVDNLRHDVVLSQRFVELGRAQIAR
Ga0207700_107157211	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPRIPIFRLGGGSDKPAPPNLAASTPFISLEGIAVGV
Ga0208416_10117721	3300026004	Rice Paddy Soil	MPKIPIFRLGGRPDKPALPNLDASTPVVLLEGIPVGVDNLRHDVVLSPKFAELARAHIARVLT
Ga0207702_124413402	3300026078	Corn Rhizosphere	MPKIPIFRLGGRPDKPALPNLDTSTPVVLLEDIPVGVDNLRH
Ga0209027_10639671	3300026300	Grasslands Soil	MPKIPIFRLGGRPDKAALPKLAASVPAFVLEGIAVGVDNLRHDVVLSPKFSE
Ga0209240_11450371	3300026304	Grasslands Soil	MPRIPIFRLGGAPDKAAPELAAATPSLSLEGLSVGVDNLRHDVVLSVRVADAARAQIARS
Ga0209218_11374502	3300027505	Forest Soil	VHSAIDSMPRIPIFRLGGAPEKPALPDLSSSTPYVSLEGLALGVDNLRHDVILSTRVVEAVRAQV
Ga0208042_10575581	3300027568	Peatlands Soil	MPRIPIFRLGGAPDKPALPSLAASTPLISLEGLAVGVDNLRHDVVLSPRFTEVARAHI
Ga0208044_11445002	3300027625	Peatlands Soil	MPRLPIFRLGGAPDKPELPNLAASTPFVSLEGLSVGVDNLRHDVVLSTRFVEAARG
Ga0209248_102587511	3300027729	Bog Forest Soil	MPRIPFFRLGAAPEKPELPALATSVPAVSLTGLAVGVDNLRHDVVLSTKFADATRAQ
Ga0209908_101122422	3300027745	Thawing Permafrost	MPRIPIFRLGGAPDKPALPKLAASTPSVSLEGLSVGVDNLRHDVVLSP
Ga0209580_102928432	3300027842	Surface Soil	MPKIPIFRLGGRPDKPALPKLAASTPLVALAGISVGVDNLRHDVVLSPKFAELAR
Ga0209274_104554282	3300027853	Soil	MPRLPIFRLGGAPEKPAPPNLAASTPFVALEGISVGVDNLRHDVVLSPKFVELARAQIARLIA
Ga0209067_108260381	3300027898	Watersheds	MPRIPIFRLGGAPDKPALPNLASSTPFVSLEGLCLGVDNL
Ga0209006_105896172	3300027908	Forest Soil	MPRLPIFRLGGTPDKPELPNLAASTPFVSLEGLSVGVDNLRHDVLLSARFMEAARSQ
Ga0209168_102906932	3300027986	Surface Soil	MPRIPIFRLGGAPEKPAAPNLAASTPFVSLEGLSVGVDNLRHDVLLS
Ga0137415_113475751	3300028536	Vadose Zone Soil	MPRIPIFRLGGSPDKTAPPELAAATPSLSLEGLFVGVDNLRHDVVLSARFADAARAQIARSI
Ga0307504_101135542	3300028792	Soil	MPRIPIFRLGGAPDKPELPNLLASTPFVSLDGLSVGVDNLRHDVV
Ga0222749_105538572	3300029636	Soil	MPRIPIFRLGGAPDKPALPNLAASTPFVALEGLSVG
Ga0311370_110327602	3300030503	Palsa	MPKLPILRMGGTPERIPPPELSASRVFVSLEGLAVGVDNLRHDVRLSPRFVEAARA
Ga0265770_10232072	3300030878	Soil	MPRIPFFRLGAAPDKPELPALATSVPAVSLTGLAVGVDNLRHDVVLSTKFADATRALIARQIARH
Ga0073994_100477831	3300030991	Soil	MPRIPIFRLGGSPDKAAPPELAAATPSLSLDGLSVGVDNLRHDV
Ga0265760_102300031	3300031090	Soil	MPRLPIFRLGGAPEKPAPPTLAASTPFVSLEGISVGVDNLRHDVVL
Ga0170824_1004540292	3300031231	Forest Soil	MPRIPIFRLGGAPEKPAAPNLAASTPFVSLEGLSVGVDNLRHDVVLSPKFVEL
Ga0170824_1212185061	3300031231	Forest Soil	MPRLPIFRLGGAPDKPELPNLAASTPFVSLEGLSVGV
Ga0310686_1166334643	3300031708	Soil	MPRLPIFRLGSAPDKPAPPNLAASTPFVSLEGLSVGVDNLRHDVVLSPRFVELGRAQ
Ga0265342_103612471	3300031712	Rhizosphere	MPRIPIFRLGGAPEKPAPPNLAASTPFITLEGISVGVDNLRHDVVLSPKF
Ga0307476_103290501	3300031715	Hardwood Forest Soil	MPRIPIFRLGGAPDKPALPKLAASTPSVSLEGLSVGVDNLRHDVVLSPKLSELGRA
Ga0307476_107366512	3300031715	Hardwood Forest Soil	MPRIPIFRLGGAPDKPGLPALAASTPSISLERLSVGVDNLRHDVVLSPRFVELGRAQIARLI
Ga0307474_110956681	3300031718	Hardwood Forest Soil	MPRIPIFRLGGAPEMPALPELASSLPSISLEGLSVGVDNLRHDVVLSPR
Ga0306919_110299811	3300031879	Soil	MPRIPIFRLGGSPEKPALPTLSASTPFVSLEGLSVGVDNLRHDVVL
Ga0308175_1004926961	3300031938	Soil	MPKIPIFRLGGRPDKPALPKLAASTPLVALDGISVGVDNLRHDVVLSPK
Ga0307479_103858973	3300031962	Hardwood Forest Soil	MPRIPIFRLGGASQRGALPELSASVPSGSLQGLSVGVDNLRHDVVLS
Ga0307472_1000620591	3300032205	Hardwood Forest Soil	MPRIPYFRLGQAPETPGLPALAESALSISLEGLSVGVDNLRHDVALS
Ga0335076_100961231	3300032955	Soil	MPRIPIFRLGGAPEKPALPNLAASTPFVSLDGIAVGVDNLRHDVVLSPRFVDLAR
Ga0335084_115105202	3300033004	Soil	MPRIPIFRLGGSPDKPALPNLSASTPFVSLEGLSVGVDNLRHDVVLSPKFAEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083337

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences