Metagenome / Metatranscriptome Family F083324

Basic Information
Family ID	F083324
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	50 residues
Representative Sequence	VPLDVVIGRALAWCVHPSASWRRLPASGRVLLVAAYVSASYVTVLTLLFIV
Number of Associated Samples	100
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.96 %
% of genes near scaffold ends (potentially truncated)	41.59 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (75.221 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (10.620 % of family members)
Environment Ontology (ENVO)	Unclassified (28.319 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.478 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.96% β-sheet: 0.00% Coil/Unstructured: 43.04%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04679	DNA_ligase_A_C	10.62
PF13088	BNR_2	2.65
PF08241	Methyltransf_11	2.65
PF00072	Response_reg	1.77
PF00756	Esterase	1.77
PF00069	Pkinase	1.77
PF02687	FtsX	1.77
PF06439	3keto-disac_hyd	1.77
PF10041	DUF2277	1.77
PF09361	Phasin_2	0.88
PF00226	DnaJ	0.88
PF00313	CSD	0.88
PF03965	Penicillinase_R	0.88
PF02811	PHP	0.88
PF05638	T6SS_HCP	0.88
PF07676	PD40	0.88
PF12704	MacB_PCD	0.88
PF16861	Carbam_trans_C	0.88
PF04519	Bactofilin	0.88
PF00857	Isochorismatase	0.88
PF13517	FG-GAP_3	0.88
PF01850	PIN	0.88
PF08388	GIIM	0.88
PF13360	PQQ_2	0.88
PF13565	HTH_32	0.88
PF16576	HlyD_D23	0.88
PF01636	APH	0.88
PF13263	PHP_C	0.88
PF13637	Ank_4	0.88
PF13432	TPR_16	0.88
PF13564	DoxX_2	0.88
PF00989	PAS	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	10.62
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.08
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.88
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.88
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.88
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.22 %
Unclassified	root	N/A	23.89 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.05 %
Unclassified	root	N/A	23.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.19 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.77 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	29.20 %
Unclassified	root	N/A	23.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.54 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.77 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.88 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.32 %
Unclassified	root	N/A	23.89 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	2.65 %
Acidobacteria bacterium 13_1_40CM_2_64_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_64_6	0.88 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.88 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.88 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.32 %
Unclassified	root	N/A	23.89 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2.65 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.88 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.88 %
Capsulimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales	0.88 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
Acidobacteria bacterium 13_1_40CM_2_64_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_64_6	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.32 %
Unclassified	root	N/A	23.89 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	2.65 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.88 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.88 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Capsulimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae	0.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.88 %
Acidobacteria bacterium 13_1_40CM_2_64_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_64_6	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.32 %
Unclassified	root	N/A	23.89 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	2.65 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.88 %
Capsulimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas	0.88 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.88 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.88 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.88 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.88 %
Acidobacteria bacterium 13_1_40CM_2_64_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_64_6	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.32 %
Unclassified	root	N/A	23.89 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	2.65 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.88 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.88 %
Sinorhizobium medicae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium medicae	0.88 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.88 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.88 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.88 %
Acidobacteria bacterium 13_1_40CM_2_64_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_64_6	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH01BLX1H	Not Available	504	Open in IMG/M
3300002568\|C688J35102_120012610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300004114\|Ga0062593_100025356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	3250	Open in IMG/M
3300004156\|Ga0062589_100018845	All Organisms → cellular organisms → Bacteria	3192	Open in IMG/M
3300004156\|Ga0062589_100924645	Not Available	806	Open in IMG/M
3300004157\|Ga0062590_100913018	Not Available	824	Open in IMG/M
3300004643\|Ga0062591_102754809	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005172\|Ga0066683_10004472	All Organisms → cellular organisms → Bacteria	6600	Open in IMG/M
3300005175\|Ga0066673_10429353	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005293\|Ga0065715_10121885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2213	Open in IMG/M
3300005295\|Ga0065707_10445502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300005295\|Ga0065707_10744365	Not Available	621	Open in IMG/M
3300005345\|Ga0070692_10897199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300005468\|Ga0070707_100432419	All Organisms → cellular organisms → Bacteria → Acidobacteria	1277	Open in IMG/M
3300005468\|Ga0070707_101734603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300005549\|Ga0070704_101764797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005557\|Ga0066704_10635880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300005569\|Ga0066705_10518406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	744	Open in IMG/M
3300005576\|Ga0066708_10362564	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005617\|Ga0068859_100461336	Not Available	1366	Open in IMG/M
3300005713\|Ga0066905_100092404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2027	Open in IMG/M
3300005764\|Ga0066903_100210912	All Organisms → cellular organisms → Bacteria → Proteobacteria	2925	Open in IMG/M
3300005764\|Ga0066903_100745691	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300006031\|Ga0066651_10196312	Not Available	1067	Open in IMG/M
3300006046\|Ga0066652_100086535	All Organisms → cellular organisms → Bacteria → Proteobacteria	2488	Open in IMG/M
3300006237\|Ga0097621_101243336	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300006847\|Ga0075431_100969125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300006852\|Ga0075433_10722456	Not Available	872	Open in IMG/M
3300006894\|Ga0079215_10487464	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300006903\|Ga0075426_10022001	All Organisms → cellular organisms → Bacteria	4558	Open in IMG/M
3300006918\|Ga0079216_11312326	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300007004\|Ga0079218_11839403	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300007265\|Ga0099794_10704397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009012\|Ga0066710_100003494	All Organisms → cellular organisms → Bacteria	13431	Open in IMG/M
3300009012\|Ga0066710_102711422	Not Available	706	Open in IMG/M
3300009029\|Ga0066793_10677980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	586	Open in IMG/M
3300009038\|Ga0099829_10683870	Not Available	853	Open in IMG/M
3300009088\|Ga0099830_10295300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium medicae	1292	Open in IMG/M
3300009088\|Ga0099830_10543350	Not Available	950	Open in IMG/M
3300009090\|Ga0099827_10085427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2475	Open in IMG/M
3300009094\|Ga0111539_10045391	All Organisms → cellular organisms → Bacteria	5260	Open in IMG/M
3300009094\|Ga0111539_12506515	Not Available	598	Open in IMG/M
3300009094\|Ga0111539_12862138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009137\|Ga0066709_100954281	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300009153\|Ga0105094_10051085	All Organisms → cellular organisms → Bacteria → Proteobacteria	2292	Open in IMG/M
3300009153\|Ga0105094_10947608	Not Available	509	Open in IMG/M
3300009610\|Ga0105340_1470357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300010046\|Ga0126384_10840475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300010047\|Ga0126382_10839165	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300010166\|Ga0126306_11693124	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300010301\|Ga0134070_10343081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300010329\|Ga0134111_10057519	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300010358\|Ga0126370_12332009	Not Available	530	Open in IMG/M
3300010399\|Ga0134127_11157953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300011120\|Ga0150983_15254330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	846	Open in IMG/M
3300011270\|Ga0137391_11434940	Not Available	536	Open in IMG/M
3300011445\|Ga0137427_10146520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300012202\|Ga0137363_10426995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300012203\|Ga0137399_11134027	Not Available	658	Open in IMG/M
3300012212\|Ga0150985_109741818	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300012363\|Ga0137390_10845859	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300012396\|Ga0134057_1341906	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012901\|Ga0157288_10425958	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012917\|Ga0137395_10991494	Not Available	602	Open in IMG/M
3300012989\|Ga0164305_10984577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300014154\|Ga0134075_10135210	Not Available	1051	Open in IMG/M
3300014302\|Ga0075310_1131128	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300015201\|Ga0173478_10225530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300015371\|Ga0132258_10596761	All Organisms → cellular organisms → Bacteria	2772	Open in IMG/M
3300015371\|Ga0132258_11566843	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300015374\|Ga0132255_101791716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300015374\|Ga0132255_103347295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300018063\|Ga0184637_10211834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300018429\|Ga0190272_13229489	Not Available	508	Open in IMG/M
3300018433\|Ga0066667_10439824	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1063	Open in IMG/M
3300018482\|Ga0066669_10535616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_64_6	1018	Open in IMG/M
3300018482\|Ga0066669_11877838	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300019362\|Ga0173479_10067261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300019377\|Ga0190264_11691469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300019870\|Ga0193746_1029875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300021344\|Ga0193719_10034785	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300021432\|Ga0210384_10218033	All Organisms → cellular organisms → Bacteria → Acidobacteria	1717	Open in IMG/M
3300023072\|Ga0247799_1079454	Not Available	573	Open in IMG/M
3300024055\|Ga0247794_10132907	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300025321\|Ga0207656_10464306	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300025910\|Ga0207684_11726089	Not Available	504	Open in IMG/M
3300025911\|Ga0207654_10097795	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300025922\|Ga0207646_10558412	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300025924\|Ga0207694_10653780	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300025927\|Ga0207687_11656347	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300025934\|Ga0207686_10325189	Not Available	1150	Open in IMG/M
3300025942\|Ga0207689_11628860	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300025986\|Ga0207658_10168044	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300025986\|Ga0207658_10353604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	1280	Open in IMG/M
3300026067\|Ga0207678_10094236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	2558	Open in IMG/M
3300026537\|Ga0209157_1139034	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300026550\|Ga0209474_10001483	All Organisms → cellular organisms → Bacteria	22795	Open in IMG/M
3300027846\|Ga0209180_10316455	Not Available	893	Open in IMG/M
3300027862\|Ga0209701_10153843	Not Available	1402	Open in IMG/M
3300027876\|Ga0209974_10444971	All Organisms → cellular organisms → Eukaryota → Sar	513	Open in IMG/M
3300028884\|Ga0307308_10463245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300028906\|Ga0308309_10967048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	738	Open in IMG/M
3300031231\|Ga0170824_107461424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300031421\|Ga0308194_10160408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300031720\|Ga0307469_12259030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300031824\|Ga0307413_11054126	Not Available	700	Open in IMG/M
3300031940\|Ga0310901_10583273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300033811\|Ga0364924_044986	Not Available	932	Open in IMG/M
3300034125\|Ga0370484_0103135	Not Available	745	Open in IMG/M
3300034147\|Ga0364925_0171728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300034151\|Ga0364935_0042226	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300034817\|Ga0373948_0055558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.99%
Host-Associated	Host-Associated	23.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.57%
Plants	Host-Associated → Plants	23.01%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.85%
Sediment	Environmental → Aquatic → Sediment	2.65%
Floodplain	Environmental → Terrestrial → Floodplain	2.65%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.87%
Loam	Environmental → Terrestrial → Soil → Loam	12.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083324

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_06520620	2124908008	Soil	VPFDVVLGRALAWCANPYAAWRRLPASGRVLLVAAYVSAGYVTVLTLLLIS
C688J35102_1200126102	3300002568	Soil	MNEIVPLDVALGRALACCLHPVASWRLLPAHGRVVLVAAYVSASYVTVFAALCFA*
Ga0062593_1000253564	3300004114	Soil	MDVAIGRALACCVHPVVAWRRLTAYGRVGLVAAYVSASYVTMLAALLLA*
Ga0062589_1000188454	3300004156	Soil	MDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA*
Ga0062589_1009246451	3300004156	Soil	LSGSVPLDIVIGRAVAYCMYPWASWRRLPALGRLMLVAAYVSASYVAVLALLLIA*
Ga0062590_1009130182	3300004157	Soil	MTFEVVTGRALAFCVHPLSAWHRLPTSGRVLLVAAYVSASYALVLTALFIV*
Ga0062591_1027548093	3300004643	Soil	FCAHPFASWRLLPASGRVLLVAAYVSASYVTVLTALLLA*
Ga0066683_100044725	3300005172	Soil	VPLDIVIGRALACCVYPSASWRRLPATGRVLLVAAYVGAGYVTVLTLLFIA*
Ga0066673_104293531	3300005175	Soil	VLLPAVIGRLLAYGLHPCAAWRRLPASGRAWLVAAYVSASYVAVLAFLLNARRF*
Ga0065715_101218853	3300005293	Miscanthus Rhizosphere	MDVVLGRALACCAHPVLSWRRLPAYGRVGLVAAYVSASYVTVLTALLFA*
Ga0065707_104455022	3300005295	Switchgrass Rhizosphere	MDVAIGRALACCVHPVVAWRRSTAYGRVGLVAAYVSASYVTMLAALLLA*
Ga0065707_107443652	3300005295	Switchgrass Rhizosphere	MDVVIGRALACCAHPVLSWRRLPAYGRVGLVAAYVSASYVTVLAALLLA*
Ga0070692_108971992	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTGGVPMDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA*
Ga0070707_1004324193	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVPFDVVIGRSLACCAHPAVAWRRLPASGRVLLIAAYVSASYVTVLTLLLIV*
Ga0070707_1017346031	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPVDVAIGRSLACCAHPAAAWRRLPASGRVLLVAAYVSAGYVTVLSLLLIAR*
Ga0070704_1017647972	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	IGRSLACCVHPSASWRRLSAPGRVLLVAAYVSASYVAVLTLLFIV*
Ga0066704_106358801	3300005557	Soil	MPLEVVIGRALACCVHPSASWRRLPASGRVLLVAAYVSASYATVLMLLFIA*
Ga0066705_105184062	3300005569	Soil	IPVVIGRSLACCLHPWAAWRRLPASGRAWLVAAYVSASYVAVLAFLLNA*
Ga0066708_103625642	3300005576	Soil	VLLPAVIGRLLAYGLHPCAAWRRLPASGRAWLVAAYVSASYVAVLAFLLNA*
Ga0068859_1004613363	3300005617	Switchgrass Rhizosphere	ACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA*
Ga0066905_1000924043	3300005713	Tropical Forest Soil	VPLELAIGRALACCAHPAISWRRLPASGRVMLVAAYVSASYVTVLTLLMLI*
Ga0066903_1002109122	3300005764	Tropical Forest Soil	LVSRVPLDVAMGRSLAYAMNPTTSWRRLSARGRVGLVAAYVSASYVAVLMLLFAFRSP*
Ga0066903_1007456911	3300005764	Tropical Forest Soil	VRLAVFLGRSFTYCRYPCAAWRRLPASGRALLLAAYAGVSYVTVLALLLIA*
Ga0066651_101963122	3300006031	Soil	MPLEVVTGRALAFCAHPLSAWDRLPASGRILLVAAYVSASYAIVLMALFIA*
Ga0066652_1000865354	3300006046	Soil	VRLPVFLGRSFIYCLYPCAGWRRLPASGRALLLAAYVGVSYVTVLALLLIA*
Ga0070715_101923152	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTGVPLDVAIGRALACCVHPVASWRLLPAYGRVVLVAAYVSASY
Ga0097621_1012433363	3300006237	Miscanthus Rhizosphere	VVAMKTGVPLDVAIGRALACCVHPVASWRLLPAYGRVVLVAAYVSASYVTVLTALLLA*
Ga0075431_1009691251	3300006847	Populus Rhizosphere	AQLEGVPFDVLIGRTLAWWVHPQASWRHLKATGRVVLVAAYVSAGYVTVLTLLLIA*
Ga0075433_107224562	3300006852	Populus Rhizosphere	MGRALALCVHPLAAWRRLPASGRVLLVAAYVSASYLIVLSALFIV*
Ga0079215_104874642	3300006894	Agricultural Soil	LPDFVPFDVVIGRVLACCVHPRASWRILPARGRLMLVAAYVSASYMTVLTLLFIA*
Ga0075426_100220013	3300006903	Populus Rhizosphere	MPLEVVIGRGLACCVHPSASWRRLPASGRVFLVAAYVSASYATVLTLLFIA*
Ga0079216_113123261	3300006918	Agricultural Soil	WCAHPYLSWRRLPASGRVLLVAAYVSASYVTVLTLLLVA*
Ga0079218_118394032	3300007004	Agricultural Soil	VSFEARLGRSLAFCAYPEAAWRRLPARGRALLVTAYLLAAYVTVLSALLAL*
Ga0099794_107043972	3300007265	Vadose Zone Soil	VPFDVVIGRSLACCAHPAVAWRRLPASGRVLLIAAYVSASYVTVLALLLIV*
Ga0066710_1000034943	3300009012	Grasslands Soil	MPLEVVIGRALACCVHPSASWRRLPAPGRVLLVAAYVSASYVTVLMLLFIG
Ga0066710_1027114221	3300009012	Grasslands Soil	VPLDVVIGRALAFSVHPSASWRRLPASGRVLLIAAYVSASYVTVLTLLFIG
Ga0066793_106779801	3300009029	Prmafrost Soil	TWNRCCSASRVPLDVVIGRALAWCVHPSASWRRLPASGRVLLVAAYVSASYVTVRTLLFIV*
Ga0099829_106838701	3300009038	Vadose Zone Soil	VPLDVVIGRALAFSVHPSASWRRLPASGRVLLVAAYVSASYVTVLTLLFIV*
Ga0099830_102953001	3300009088	Vadose Zone Soil	LAYCVHPSASWRRLPATGRALLIAAFVSASYVTVLILLLIV*
Ga0099830_105433501	3300009088	Vadose Zone Soil	VPLDVVIGRALAFSVHPSASCSRLPASGRVLLVAAYVSASYVTVLTLLFIV*
Ga0099827_100854272	3300009090	Vadose Zone Soil	VPFDVVIGRSLACCAHPVVAWRRLPASGRVLLIAAYVSASYLTVLTLLLVV*
Ga0111539_100453915	3300009094	Populus Rhizosphere	VIDVPFDVAIGRALAWCAHPYLSWGRLPASGRVVLVAAYVSAGYVTVLTLLLIA*
Ga0111539_125065152	3300009094	Populus Rhizosphere	VIGVPFDVAIGRALAWCALPHLSWRRLPASGRVLLVAAYVSAGYVTVLTLLLIA*
Ga0111539_128621382	3300009094	Populus Rhizosphere	VPLDIVLGRALACCAHPWASWRLLPARGRLWLVAAYVSASYVTVLSLLLIA*
Ga0066709_1009542812	3300009137	Grasslands Soil	MPLEVVIGRALACCVHPSASWRRLPAPGRVLLVAAYVSASYVTVLMLLFIG*
Ga0105094_100510851	3300009153	Freshwater Sediment	GRALAWCVHPVAAWQRLPARGRVLLVAAYVGASYTTVLSLLFMV*
Ga0105094_109476081	3300009153	Freshwater Sediment	VPLDLFIGRALAWCVHPVAAWQRLPARGRVVLVAAYVSASYTTVLTVLFLV*
Ga0105340_14703571	3300009610	Soil	IRSVPIDVVLGRALAWCANPYASWRRLPASGRVWLVAAYVSASYVTVLTLLLIS*
Ga0126384_108404752	3300010046	Tropical Forest Soil	MSGTVPLELAIGRALACCAHPAISWRRLPASGRVMLVAAYVSASYVTVLTLLLLI*
Ga0126382_108391652	3300010047	Tropical Forest Soil	MPYEVVMGRALAFYVHPLAAWRRLPTSHRALLLAAYASAGYLIVLAALFIV*
Ga0126306_116931241	3300010166	Serpentine Soil	AWCAHPYASWRRLPASGRVLLVAAYVSASYVTVLTVLLVARI*
Ga0134070_103430812	3300010301	Grasslands Soil	VPLDIVIGRALACCVYPSASWRRLPASGRVLLVAAYVSASYATVLMLLFI
Ga0134111_100575192	3300010329	Grasslands Soil	VPLDIVIGRALACCVYPSASWRRLPATGRVLLVAAYGGAGYVTVLTLLFIA*
Ga0126370_123320091	3300010358	Tropical Forest Soil	MPYEVVMGRALAFYVHPVAAWRRLPTSHRALLLAAYASAGYLIVLAALFIV*
Ga0134127_111579532	3300010399	Terrestrial Soil	VEPLLLSAGLVALDVLIGRALAWCLHPAAAWQRLPAGGRVLLVAAYVSASYMTVLTLLLIA*
Ga0150983_152543301	3300011120	Forest Soil	RWNRCCSAGTMPLDVVVGRALAHCVHPSVSWRRLPASGRVLLVAAYVSASYVTVLTLLFLIV*
Ga0137391_114349401	3300011270	Vadose Zone Soil	MTPEVVVGRALAYCAHPSASWRRLPAPGRALLVAAYVSASYVTVLILLFIV*
Ga0137427_101465202	3300011445	Soil	VPSDVAIERALTCCVDATISWRRLPASGRVQLVAAYVSASYVTVLDAAPR
Ga0137363_104269953	3300012202	Vadose Zone Soil	CVHPYASWRQLSASGRAWLIAAYVGAGYLTVLSLLFIV*
Ga0137399_111340273	3300012203	Vadose Zone Soil	YPAAAWRRLPASGRVLLLAAYVSASYVTVLTLLFVV*
Ga0150985_1097418182	3300012212	Avena Fatua Rhizosphere	MAYSIVIGRSLAYCVHPWASWRRLPASGRTMLVAAYAGASYVTVLTLLLVK*
Ga0137390_108458592	3300012363	Vadose Zone Soil	VAPAGPVPLDVVIGRALAFSVHPSASWRRLPASGRVLLVAAYVSASYVTVLTLLFIV*
Ga0134057_13419061	3300012396	Grasslands Soil	IGRGLACCVHPSASWRRLPASGRVLLVAAYVSASYATVLMLLFIR*
Ga0157288_104259583	3300012901	Soil	LACCVHPVVAWRRLTAYGRVGLVAAYVSASYVTMLAALLLA*
Ga0137395_109914942	3300012917	Vadose Zone Soil	VLLPAVIGRLLAYGLHPCAAWRRLPAPGRAWLVAAYVSASYVTVLAFLLTA*
Ga0164305_109845772	3300012989	Soil	MKTGVPLDVAIGRALACCVHPVASWRLLPAYGRVVLVAAYVSASYVTVLTALLLA*
Ga0134075_101352102	3300014154	Grasslands Soil	ACCVYPSASWRRLPATGRVLLVAAYVGAGYVTVLTLLFIA*
Ga0075310_11311282	3300014302	Natural And Restored Wetlands	EVFLGRSAAFCVHPFAAWRRLPTTGRVLLVGVYFSGSYVGVLTALLIG*
Ga0173478_102255302	3300015201	Soil	MTFEVVTGRALAFCVHPLSAWHRLPTSGRVLLVAAYVSASYAIVLMALFIV*
Ga0132258_105967613	3300015371	Arabidopsis Rhizosphere	VLPVFLGRSFIYCLYPCAAWRRLPASGRALLLAAYAGVSYVTVLTLLLIA*
Ga0132258_115668434	3300015371	Arabidopsis Rhizosphere	AHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA*
Ga0132255_1017917162	3300015374	Arabidopsis Rhizosphere	GPVPPRRVIGRALEGGVHALISWRRLAVSGRVPLVAAYVSASYATVLNRGANPDVVA*
Ga0132255_1033472952	3300015374	Arabidopsis Rhizosphere	MTAGVPMDVVIGRFLACCAHPVLSWRRLPAFGRVGLVAAYVSASYVTVLTALLLA*
Ga0184637_102118343	3300018063	Groundwater Sediment	VPINVVIGRALACCVYPLASWRRLPASGRVALVAAYVSAGYVTVLTLLFIV
Ga0190272_132294891	3300018429	Soil	IGRALAWCVHPAAAWHRLPARGRVLLVAAYVSASYMTVLTLLFIV
Ga0066667_104398241	3300018433	Grasslands Soil	VPLDIVIGRALACCVYPSASWRRLPATGRVLLVAAYVGAGYVTVLTLLFIA
Ga0066669_105356161	3300018482	Grasslands Soil	VLLPAVIGRLLAYGLHPCAAWRRLPASGRAWLVAAYVSASYVAVLVFLLNA
Ga0066669_118778381	3300018482	Grasslands Soil	AVLSPVVIGRSLACCLHPWAAWRRLPASGRAWLVAAYVSASYVTVLAVLLIA
Ga0173479_100672612	3300019362	Soil	MTFEVVTGRALAFCVHPLSAWHRLPTSGRVLLVAAYVSASYALVLTALFIV
Ga0190264_116914692	3300019377	Soil	CLQPAPAWRRLPASGRALLVAAYVSDSYVTVLTLLFMCHAKG
Ga0193746_10298751	3300019870	Soil	MRLLVPLDVAIGRALACCVHPSASWRLLPASGRVLLVAAYVSASYVTVLTLLFVA
Ga0193719_100347853	3300021344	Soil	MDVVIGRALACGAHPSASWRRLPASGRVLLVAAYVSASYVTVLTLLFIL
Ga0210384_102180332	3300021432	Soil	MPLDVVVGRALAHCVHPSVSWRRLPASGRVLLVAAYVSASYVTVLLLCFIV
Ga0247799_10794542	3300023072	Soil	MDVAIGRALACCVHPVVAWRRLTAYGRVGLVAAYVSASYVTMLAALLLA
Ga0247794_101329073	3300024055	Soil	MDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207656_104643063	3300025321	Corn Rhizosphere	MTGGVPMDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207684_117260891	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPLEAVVGRALAYCVHPSASWRRLPARGRVLLVAAYVSASYVTVLILLFMV
Ga0207654_100977951	3300025911	Corn Rhizosphere	PMDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207646_105584123	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVPFDVVIGRSLACCAHPAVAWRRLPASGRVLLIAAYVSASYVTVLTLLLIV
Ga0207694_106537803	3300025924	Corn Rhizosphere	AMTGGVPMDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207687_116563473	3300025927	Miscanthus Rhizosphere	LACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207686_103251893	3300025934	Miscanthus Rhizosphere	VVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207689_116288601	3300025942	Miscanthus Rhizosphere	ACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207658_101680441	3300025986	Switchgrass Rhizosphere	VPMDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTALLLA
Ga0207658_103536043	3300025986	Switchgrass Rhizosphere	MDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTVLTAL
Ga0207678_100942362	3300026067	Corn Rhizosphere	MDVVIGRTLACCAHPVLSWRRLPAHGRVVLVAAYVSASYAIVLMALFIA
Ga0209157_11390343	3300026537	Soil	DVPLDVVIGRGLACCVHPSASWRRLPASGRVLLVAAYVSASYATVLTLLFIA
Ga0209474_100014836	3300026550	Soil	VLLPAVIGRLLAYGLHPCAAWRRLPASGRAWLVAAYVSASYVAVLAFLLNA
Ga0209180_103164551	3300027846	Vadose Zone Soil	LAFSVHPSASWRRLPASGRVLLVAAYVSASYVTVLTLLFIV
Ga0209701_101538432	3300027862	Vadose Zone Soil	VPLDVVIGRALAFSVHPSASWRRLPASGRVLLVAAYVSASYVTVLTLLFIV
Ga0209974_104449712	3300027876	Arabidopsis Thaliana Rhizosphere	LIGRALAWCVHPVAAWQRLPARGRVLLVAAYVGASYTTVLAVLLMA
Ga0307308_104632451	3300028884	Soil	LAYCVHPSAAWRRLPTSGRVLLVAAYVSASYVTVLTALFIV
Ga0308309_109670482	3300028906	Soil	AHPSASWRRLPAPGRALLVAAYVGVSYVTVLILLFIV
Ga0170824_1074614241	3300031231	Forest Soil	VVIGRAVACCVHPSASWRRLPAPGRVLLVAAYVSASYVTVLTLLFFLV
Ga0308194_101604082	3300031421	Soil	RSLAYCVHPSAAWRRLPTSGRVLLVAAYVSASYVTVLTALFIV
Ga0307469_122590302	3300031720	Hardwood Forest Soil	HVPIEVVIGRSLACCVHPSVSWRRLPASGRVLLVAAYVSASYVAVLTLLFIV
Ga0307413_110541262	3300031824	Rhizosphere	MDVPFDVAIGRALAWCAHPYLSWRRLPASGRVLLVAAYVSASYVTVLTLLLVA
Ga0310901_105832732	3300031940	Soil	IEVAQEIDVPFDVAIGRALAWCAHPYLSWGRLPASGRVVLVAAYVSAGYVTVLTLLLIA
Ga0364924_044986_368_481	3300033811	Sediment	VYPFASWRRLPASGRVALVAAYVSAGYVTVLTLLFIV
Ga0370484_0103135_467_622	3300034125	Untreated Peat Soil	VPLDVVIGRALAWCVHPSASWRRLPASGRVLLVAAYVSASYVTVLTLLFIV
Ga0364925_0171728_655_792	3300034147	Sediment	MPSDVAIERALTCCVDAAISWRRLPASGRVQLVAAYVSASYVTVLD
Ga0364935_0042226_2_121	3300034151	Sediment	YCVYPWASWRRLPARGRLMLVAAYVSASYVTVLALLLMV
Ga0373948_0055558_531_680	3300034817	Rhizosphere Soil	MDVVIGRALACCAHPVLSWRRLPAHGRVVLVAAYVSASYVTMLAALLLA

Hidden Markov Model


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