Metagenome / Metatranscriptome Family F083318

Basic Information
Family ID	F083318
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	54 residues
Representative Sequence	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRRAE
Number of Associated Samples	100
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.82 %
% of genes near scaffold ends (potentially truncated)	62.83 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (92.035 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (11.504 % of family members)
Environment Ontology (ENVO)	Unclassified (28.319 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.363 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.27% β-sheet: 0.00% Coil/Unstructured: 70.73%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00180	Iso_dh	23.01
PF08450	SGL	15.04
PF03600	CitMHS	5.31
PF07366	SnoaL	4.42
PF02567	PhzC-PhzF	3.54
PF13602	ADH_zinc_N_2	2.65
PF07883	Cupin_2	0.88
PF01638	HxlR	0.88
PF14559	TPR_19	0.88
PF06745	ATPase	0.88
PF02626	CT_A_B	0.88
PF02673	BacA	0.88
PF13453	zf-TFIIB	0.88
PF13581	HATPase_c_2	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	15.04
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	15.04
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	3.54
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.88
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.04 %
Unclassified	root	N/A	7.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.04 %
Unclassified	root	N/A	7.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.04 %
Unclassified	root	N/A	7.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.47 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	16.81 %
Unclassified	root	N/A	7.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	16.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.96 %
Unclassified	root	N/A	7.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	8.85 %
Unclassified	root	N/A	7.96 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	7.08 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.85 %
Unclassified	root	N/A	7.96 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	7.08 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.85 %
Unclassified	root	N/A	7.96 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	7.08 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.85 %
Unclassified	root	N/A	7.96 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	7.08 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.85 %
Unclassified	root	N/A	7.96 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	7.08 %
Dactylosporangium aurantiacum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium aurantiacum	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17491740	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
2166559005\|cont_contig85873	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
2170459012\|GOYVCMS02IC3B1	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300000953\|JGI11615J12901_10035952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	543	Open in IMG/M
3300000956\|JGI10216J12902_101336261	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300001535\|A3PFW1_10491021	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300002074\|JGI24748J21848_1062052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300004114\|Ga0062593_102903047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	548	Open in IMG/M
3300004156\|Ga0062589_101898607	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300004479\|Ga0062595_100907430	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005166\|Ga0066674_10256330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	828	Open in IMG/M
3300005177\|Ga0066690_10748256	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005178\|Ga0066688_10215536	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300005186\|Ga0066676_11171572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	504	Open in IMG/M
3300005290\|Ga0065712_10177962	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300005295\|Ga0065707_10820666	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005330\|Ga0070690_100646579	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300005343\|Ga0070687_100589378	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300005356\|Ga0070674_100019934	All Organisms → cellular organisms → Bacteria → Proteobacteria	4272	Open in IMG/M
3300005435\|Ga0070714_101708960	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005436\|Ga0070713_101899466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	578	Open in IMG/M
3300005451\|Ga0066681_10185493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300005467\|Ga0070706_100192270	All Organisms → cellular organisms → Bacteria → Proteobacteria	1907	Open in IMG/M
3300005598\|Ga0066706_10202114	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300005598\|Ga0066706_11532524	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005764\|Ga0066903_100785385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1699	Open in IMG/M
3300005764\|Ga0066903_101377530	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005764\|Ga0066903_101720613	Not Available	1195	Open in IMG/M
3300005764\|Ga0066903_108009740	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005834\|Ga0068851_10118702	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300005841\|Ga0068863_101088937	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005985\|Ga0081539_10311053	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300006163\|Ga0070715_10304848	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300006163\|Ga0070715_10965473	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300006358\|Ga0068871_100253245	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300007076\|Ga0075435_100866331	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300009012\|Ga0066710_102069719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	839	Open in IMG/M
3300009012\|Ga0066710_104421035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	525	Open in IMG/M
3300009137\|Ga0066709_101766609	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300009792\|Ga0126374_11905833	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010048\|Ga0126373_10472736	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300010373\|Ga0134128_11704141	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300010373\|Ga0134128_12889376	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300010376\|Ga0126381_101975525	Not Available	841	Open in IMG/M
3300010376\|Ga0126381_105157381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	500	Open in IMG/M
3300010398\|Ga0126383_10986283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	931	Open in IMG/M
3300010398\|Ga0126383_12292457	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010401\|Ga0134121_12976633	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300012198\|Ga0137364_11412682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300012200\|Ga0137382_10656376	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012201\|Ga0137365_10318652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1151	Open in IMG/M
3300012211\|Ga0137377_10488389	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300012231\|Ga0137465_1158752	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012285\|Ga0137370_10781619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	592	Open in IMG/M
3300012353\|Ga0137367_10797212	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012685\|Ga0137397_10464706	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300012957\|Ga0164303_10625383	Not Available	713	Open in IMG/M
3300012986\|Ga0164304_11109712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	633	Open in IMG/M
3300012989\|Ga0164305_10888250	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300013765\|Ga0120172_1114621	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300014745\|Ga0157377_11261766	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300015241\|Ga0137418_10319050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	1293	Open in IMG/M
3300015374\|Ga0132255_101251963	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300016404\|Ga0182037_10965064	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300016404\|Ga0182037_11356053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	628	Open in IMG/M
3300018066\|Ga0184617_1189807	Not Available	611	Open in IMG/M
3300018073\|Ga0184624_10081656	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300018075\|Ga0184632_10040091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2012	Open in IMG/M
3300018433\|Ga0066667_11018829	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300019356\|Ga0173481_10502996	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300019867\|Ga0193704_1086352	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300019869\|Ga0193705_1069651	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300019890\|Ga0193728_1109846	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300020012\|Ga0193732_1003129	All Organisms → cellular organisms → Bacteria	2931	Open in IMG/M
3300020018\|Ga0193721_1059583	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300021086\|Ga0179596_10228337	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300021560\|Ga0126371_11403036	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300021560\|Ga0126371_11520815	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300022756\|Ga0222622_10023886	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300022756\|Ga0222622_11412398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300025315\|Ga0207697_10130641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1085	Open in IMG/M
3300025905\|Ga0207685_10322188	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300025906\|Ga0207699_10867490	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300025929\|Ga0207664_11660922	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300025935\|Ga0207709_10227524	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300025936\|Ga0207670_10719570	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300025960\|Ga0207651_10576114	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300026078\|Ga0207702_10901632	Not Available	876	Open in IMG/M
3300026088\|Ga0207641_10270076	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300026295\|Ga0209234_1149799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300026305\|Ga0209688_1005507	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300026540\|Ga0209376_1318969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	599	Open in IMG/M
3300026552\|Ga0209577_10688035	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300028381\|Ga0268264_11313644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium aurantiacum	733	Open in IMG/M
3300028536\|Ga0137415_10579505	Not Available	932	Open in IMG/M
3300028824\|Ga0307310_10261144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300030945\|Ga0075373_11590236	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1025804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	1219	Open in IMG/M
3300031152\|Ga0307501_10207582	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300031231\|Ga0170824_125012432	Not Available	557	Open in IMG/M
3300031446\|Ga0170820_12988609	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300031469\|Ga0170819_12429034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300031474\|Ga0170818_114549094	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031718\|Ga0307474_11120780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	622	Open in IMG/M
3300031833\|Ga0310917_10491218	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300031910\|Ga0306923_11013445	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300031942\|Ga0310916_11327387	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300031942\|Ga0310916_11702946	Not Available	510	Open in IMG/M
3300031954\|Ga0306926_10304937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1971	Open in IMG/M
3300032001\|Ga0306922_10847017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	953	Open in IMG/M
3300032180\|Ga0307471_102620398	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300033289\|Ga0310914_11187118	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.96%
Host-Associated	Host-Associated	14.16%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.76%
Plants	Host-Associated → Plants	14.16%
Aquatic	Environmental → Aquatic	6.19%
Modeled	Engineered → Modeled	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.85%
Sediment	Environmental → Aquatic → Sediment	5.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.60%
Loam	Environmental → Terrestrial → Soil → Loam	13.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01625330	2088090014	Soil	MMNLFGAPGGKALWKERSYLFGEEFRRYIEKDLMIRPLHPDAKPLGAFNIALGKE
cont_0873.00005720	2166559005	Simulated	GDDEPFGAPGGKAFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFSIGQSAR
N56_07711290	2170459012	Grass Soil	MNLVCAPDGKAFWKDRAYMFGDEFRRYVESDLMKREPHPAAKPMGAFSIGQSAT
JGI11615J12901_100359522	3300000953	Soil	MMNHFGAPGGKALWKERSYLFGEEFRRYIENDVMTREPHPDAKPMGAFPIGQSAT*
JGI10216J12902_1013362611	3300000956	Soil	GGKALWKERSYLFGEEFRRYIENDLMRRPPHPDAKPLGAFSIGPRAD*
A3PFW1_104910211	3300001535	Permafrost	GWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGRRAE
JGI24748J21848_10620522	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKRXPHPDAKPLGAFPIGRHAE*
Ga0062593_1029030472	3300004114	Soil	MNLVGAPGGKALWKDRAYMFGEQFRRYVEDDLMKRAPHPDAKPMGAFSIGRPSE*
Ga0062589_1018986072	3300004156	Soil	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKRGPHPDAKPLGAFPIGGGAE*
Ga0062595_1009074301	3300004479	Soil	VCAPDGKAFWKDRGYMFGEEFRRDVENDLMQRPPHPDAKPLGAFPIGQRAE*
Ga0066674_102563303	3300005166	Soil	MGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFPIGVRAE*
Ga0066690_107482562	3300005177	Soil	MNLVCAPGGKAFWKDRAYMFGDQFRRYVESDLMTREPHPDAKPMGAFSIGRSVG*
Ga0066688_102155361	3300005178	Soil	MNLVCAPGGKAFWKDRAYMFGDQFRRYVESDLMTREPHPDAKPMGAFSIGGVS
Ga0066676_111715721	3300005186	Soil	MNLVCAPGGKAFWKERSYLFGDEFRRYIEDDLMKRELHPDAKPMGAFSIGRRAE*
Ga0065712_101779622	3300005290	Miscanthus Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKRGPHPDAKPLGAFPIGRHAE*
Ga0065707_108206661	3300005295	Switchgrass Rhizosphere	MNLVCALGGKAFWKDRGYMFGDEFRRYVENDLMKRDPHPDAKPLGAFPIG
Ga0070690_1006465791	3300005330	Switchgrass Rhizosphere	MNLVCAPGGKAFWKERSYLFGEEFRRYVEDDLMKRTPHPEAKPMGAFSIGRQAR*
Ga0070687_1005893782	3300005343	Switchgrass Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIG
Ga0070674_1000199342	3300005356	Miscanthus Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRRAE*
Ga0070714_1017089602	3300005435	Agricultural Soil	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRHAE*
Ga0070713_1018994661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDPMKREPHPDAKPLGAFPIGRRAE*
Ga0066681_101854931	3300005451	Soil	MNLTGAPGGKSLWKERAYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGRQES
Ga0070706_1001922703	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNLFGAPGGRALWKERSYLFGEEFRRYIENDLMIRPPHPDAKPLGAFTIGRPAE*
Ga0066706_102021141	3300005598	Soil	GKAFWKDGGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRRAE*
Ga0066706_115325242	3300005598	Soil	SSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGQPAK*
Ga0066903_1007853852	3300005764	Tropical Forest Soil	MNLVCAPGGKAVLERSAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFSISQPAE*
Ga0066903_1013775302	3300005764	Tropical Forest Soil	CAPGGKAFWKDRAYMFGDEFRRYIDDDLIKRKPHPEAKPMGVFPIGPCAE*
Ga0066903_1017206131	3300005764	Tropical Forest Soil	ERSYLSGEEFCCYIENDPTLRPSHPDAKQLGAFSIGPRTD*
Ga0066903_1080097401	3300005764	Tropical Forest Soil	FWKDRAYMFGDEFRRYIEDDLIKREPHLKAKPLGAFTLGSTPEQTPAR*
Ga0068851_101187021	3300005834	Corn Rhizosphere	KAFWKDRAYMFGDEFRRHIENDLMKRQPHPDAKPMGAFSLGQSAEQESAR*
Ga0068863_1010889372	3300005841	Switchgrass Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPISRRAE*
Ga0081539_103110531	3300005985	Tabebuia Heterophylla Rhizosphere	MNLVGAPGGKAFWKDRAYMYGDEFRQYIESDLMKRQPHPDAKPMGVFSIGRPAD*
Ga0070715_103048482	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	NLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKRTPHSDAKPMGAFSIGRRAE*
Ga0070715_109654731	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKRGPHPDAKPLGAFPIGR
Ga0068871_1002532451	3300006358	Miscanthus Rhizosphere	MMNLVIAPGGREFWNERGYLFGEDFRRHVEKDLMMRKPHAKAKPMGAFSIGGGGS*
Ga0075435_1008663312	3300007076	Populus Rhizosphere	MMNLIGAPGGKALWRERAYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGKPSN*
Ga0066710_1020697192	3300009012	Grasslands Soil	MNLIGAPGGKGLWKERAYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGQRAE
Ga0066710_1044210352	3300009012	Grasslands Soil	MNLIGTPGGKGLWKERAYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGRPSE
Ga0066709_1017666092	3300009137	Grasslands Soil	NLVCAPGGKVFWKDRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIRQSAT*
Ga0126374_119058331	3300009792	Tropical Forest Soil	PGGKAFWKQRSYLFGEEFRRYVENDIMKRPPHPDAKPLGAFSIGPGTE*
Ga0126373_104727361	3300010048	Tropical Forest Soil	EQVMMNLFGAPGGKAFWKERSYLFGEEFRRYIENDLMKREPHPDAKPLGAFSIAPRTE*
Ga0134128_117041412	3300010373	Terrestrial Soil	CAPGGKAFWKERAYLLGDEFRRFIENDLMTREPHPDAKPMGVIPIGQSAK*
Ga0134128_128893762	3300010373	Terrestrial Soil	CAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFPIGQSAT*
Ga0126381_1019755252	3300010376	Tropical Forest Soil	WEQVMMNLFGAPGGKALWKERSYLFGDEFRRYIEDDLMKREPHPDAKPMGAFSIGRSAEQEPAG*
Ga0126381_1051573811	3300010376	Tropical Forest Soil	LCAPDGKAFWKDRAYMFGDEFRRYIEDDVMKKKPHPDAKPMGPFSIGQLPE*
Ga0136847_131098803	3300010391	Freshwater Sediment	LVAAPGGKAFRKERGYLFGDDFRRHVESEIMTRKPHLDAKSMGAFRIGSGDGSRGAA*
Ga0126383_109862831	3300010398	Tropical Forest Soil	GKAFWKDRAYMFGDEFRCYIDDDLIKREPHPDAKPMGVFSLGSTPEQTPTR*
Ga0126383_122924573	3300010398	Tropical Forest Soil	RLELVIMNLVCALGGRTFWKGRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIAEVRNNELA*
Ga0134121_129766331	3300010401	Terrestrial Soil	GAPGGKAFWRDRAYMFGDEFRRYIDDDLIKREPHPDAKPMGVFSIGPGTE*
Ga0137364_114126821	3300012198	Vadose Zone Soil	MDWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFPIGQPAK*
Ga0137382_106563761	3300012200	Vadose Zone Soil	IFAGGKEFWKERGYLFGEEFRHHVEDDLMKREPHPDARPMGAFSIGRPAK*
Ga0137365_103186521	3300012201	Vadose Zone Soil	MMNLFGAPGGKALWNEGSYLFGEEFRRYIENDLMKREPHPDAKPLGAFSIGGGTK*
Ga0137377_104883893	3300012211	Vadose Zone Soil	MNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKREPHPDARPMGAFSIGQPAK*
Ga0137465_11587522	3300012231	Soil	MGWELLMMNLVAAPGGKAFWKERGYLFGDAFRRHVETEIMAKKPHADAKPMGAFSIGSYT
Ga0137370_107816192	3300012285	Vadose Zone Soil	MDWELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGRPAE*
Ga0137367_107972122	3300012353	Vadose Zone Soil	NLIGAPGGKGLWKERAYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFSIGRPSE*
Ga0137397_104647062	3300012685	Vadose Zone Soil	MGWELVIMNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKREPHPDARPMDAFTIGRGAE*
Ga0164303_106253832	3300012957	Soil	ELVIMNLVCAPGGKAVWKERAYMFGDEVRRYIENDLMKREPHPDAKPMGAFAIGPPAK*
Ga0164304_111097121	3300012986	Soil	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPISRGAE*
Ga0164305_108882502	3300012989	Soil	LWRCWELVLMNLVCAPGGKTFWKERGYMFGDEFRRYVESDLMKREPHPDAKPMGAFPIGHG*
Ga0120172_11146212	3300013765	Permafrost	LLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGRRAE*
Ga0157377_112617661	3300014745	Miscanthus Rhizosphere	PGGKAFWKERGYMFGGEFRRYVESDLMKREPHPDAKPMGAFSIGRPAE*
Ga0137418_103190502	3300015241	Vadose Zone Soil	MNLVCAPGGKAFWKDRGYMFGEEFRRHVEDDLMKREPHPDARPMGAFTIGRGAE*
Ga0132255_1012519633	3300015374	Arabidopsis Rhizosphere	MMNLFGAPGGKAFWKDRAYMFGEEFRRHVEDDLMKRTPHPDAKPMGAFRIGPRAE*
Ga0182037_109650642	3300016404	Soil	WELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIDDDLIKRQPHPDAKPMGVFSIGQRPE
Ga0182037_113560533	3300016404	Soil	MMNLFGAPGGKAFWKERAYMFGDEFRRYIDDDLIKREPHP
Ga0184617_11898072	3300018066	Groundwater Sediment	LGAGHHEPLSARPVARPFWKERAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIGRPAE
Ga0184624_100816562	3300018073	Groundwater Sediment	MNLNDLNLVCAPGSKAFWKDRAYMFGDEFRRYVENDLMKREPHPAAKPMGAFPIGQR
Ga0184632_100400913	3300018075	Groundwater Sediment	LIMNLVSSAGGKGFWKERGYLFGEEFRRHVEDDLMKRTPHADAKPMGAFSIGRPSE
Ga0066667_110188291	3300018433	Grasslands Soil	MGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFPIGVRAE
Ga0173481_105029962	3300019356	Soil	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRRAE
Ga0193704_10863522	3300019867	Soil	GGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGRRAE
Ga0193705_10696512	3300019869	Soil	WELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPMGAFSIGRRAE
Ga0193728_11098463	3300019890	Soil	VIMNLVCAPGGKAFWKERGYMFGGEFRRYVESDLMKREPHPDAKPMGAFPIGQR
Ga0193732_10031291	3300020012	Soil	APGGKAFWKERAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIGRPAE
Ga0193721_10595832	3300020018	Soil	VCAPGGKAFWKDRAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIGRPAE
Ga0179596_102283371	3300021086	Vadose Zone Soil	MNLVCAPGGKAFWKERAYMFGDEFRQYIESDLMKRQPHPDAKPMGAFSISPGAE
Ga0126371_114030361	3300021560	Tropical Forest Soil	ELVIMNLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFPIGQSAA
Ga0126371_115208151	3300021560	Tropical Forest Soil	MNLVCAPGGKAFWKDRAYMFGDEFRRYIDDDLIKREPHPDAKPMGVFSISGVTD
Ga0222622_100238864	3300022756	Groundwater Sediment	MNRVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRAAE
Ga0222622_114123982	3300022756	Groundwater Sediment	VSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRAPHPDAKPMGAFSIGSPAN
Ga0207697_101306411	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVGAPGGKALWKDRAYMFGDEFRRHIENDLMKREPHPDAKPMGAFSIGRPSE
Ga0207685_103221882	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVCASGGKAFWKERAYMFGDEFRHYIETDLMKREPHPDAKPMGAFAIGQPVK
Ga0207699_108674901	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LVIMNLVCAPGGKAFWKERAYMFGDEFRRYIETDLMKREPHPDAKPMGAFAIGQPVK
Ga0207664_116609222	3300025929	Agricultural Soil	GWEFVIMNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRHAE
Ga0207709_102275241	3300025935	Miscanthus Rhizosphere	LVGAPGGKAFWKDRAYMFGDEFRRHIESDLMKRQPHPDAKPMGAFSLGQSTEQESAR
Ga0207670_107195702	3300025936	Switchgrass Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKRGPHPDAKPLGAFPIGRHAEGL
Ga0207651_105761141	3300025960	Switchgrass Rhizosphere	CASGGKAFWKDRGYMFGEEFRRHVEDDLMKRTPHSDAKPMGAFSIGRRAE
Ga0207702_109016321	3300026078	Corn Rhizosphere	MNLFGAPGGKVLWKERNYLFGEEFRRYIENDLMKREPHPDAKPLGAFSISQAQSN
Ga0207641_102700762	3300026088	Switchgrass Rhizosphere	MNLVCAPGGKAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPISRRAE
Ga0209234_11497991	3300026295	Grasslands Soil	NLVGAPGGKALWKDRAYMFGDEFRRYIENDLMKREPHPDAKPMGAFSIGRRRIDVASSRC
Ga0209688_10055071	3300026305	Soil	PGGREFWRERGYLFGEEFRRHVENGLMKREPHPDAKPMGAFSIGREG
Ga0209376_13189692	3300026540	Soil	MGWELLIMNLVSSPGGKKFWKERGYLFGEEFRRHVEDDLMKRTPHPDAKPLGAFPIGQPA
Ga0209577_106880352	3300026552	Soil	VIMNLVCAPGGTAFWKDRGYMFGEEFRRYVENDLMKREPHPDAKPLGAFPIGRRAE
Ga0268264_113136443	3300028381	Switchgrass Rhizosphere	IMNLVGAPGGKALWKDRAYMFGDEFRRHIENDLMKREPHPDAKPMGAFSIGRPSE
Ga0137415_105795052	3300028536	Vadose Zone Soil	VIMNLVCAPGGKTFWNERAYMFGDEFRRYIENDVMKREPHPDAKPMGAFSIAQAQSN
Ga0307310_102611441	3300028824	Soil	ELLIMNLVSSPGGKEFWKERGYLFGEEFRRHVEDDLMKRTPHSDAKPMGAFSIGRRAE
Ga0075373_115902361	3300030945	Soil	WQHVIMNLVGAPGGKAFWKDRAYMFGDEFRRHIEDDLMKREPHPDAKPMGAFSIAQAQSN
(restricted) Ga0255311_10258042	3300031150	Sandy Soil	MMNLVNAPGGKEFWDERGYLFGDEFRGHVENDIMMRVPHVKAKPMGAFSIGGTS
Ga0307501_102075822	3300031152	Soil	ELLIMNLVSSPDGKEFWKERGYLFGEEFRRRVEDDLMKRTPHPDAKPMGAFSIGRRRIDVASSRC
Ga0170824_1250124321	3300031231	Forest Soil	MNLVGAPGGKEFWKDRAYMFGDEFRRYIETDLMNREPHPDAKPMGAFSLGRSAEQESAR
Ga0170820_129886093	3300031446	Forest Soil	MGWQHVIMNLVGAPGGKAFWKERAYMFGDEFRQHIENDLMKREPHPDAKPM
Ga0170819_124290342	3300031469	Forest Soil	WQHVIMNLVGAPGGKALWKDRAYMFGDEFRRHIEDDLIKRQPHPDAKPMGVFSISQRSE
Ga0170818_1145490941	3300031474	Forest Soil	MNLLCAPGSKVFWKDRGYMFAEEFRHYVEDDLMKRTPHPDAKPMGAFPIGQRSE
Ga0307474_111207802	3300031718	Hardwood Forest Soil	MNLIGAPGGKALWKERAYLFDDEFRRHVEEDLMKRTPHRDAKPLGAFSIGKK
Ga0310917_104912182	3300031833	Soil	IIMNFTGAPGGKAFWKERAYLFGEEFRRHVEDDLMKRTLHPDAKPFGVFSIAGIK
Ga0306923_110134451	3300031910	Soil	MMNLFGAPGGKAFWKERAYMFGDEFRRYIDDDLIKREPHPDAKPMGAFSIGQRPE
Ga0310916_113273871	3300031942	Soil	NLVCAPGGKAFWKDRAYMFGDEFRRYIEDEVMKKQPHPDAKPMGVFSIGQRSE
Ga0310916_117029462	3300031942	Soil	MMNFFGAPGGKDFWKERGYMFGDEFRRYIEDDLIKREPHPGAKPLGAFSIGQPNE
Ga0306926_103049372	3300031954	Soil	PGGKAFWKERAYMFGDEFRRYIDDDLIKREPHPDAKPMGAFSIGQRPE
Ga0306922_108470171	3300032001	Soil	MMNLFGAPGGKAFWKERAYMFGDEFRRYIDDDLIKREPHPDAKPMG
Ga0307471_1026203982	3300032180	Hardwood Forest Soil	APGGKAFWKERAYMFGDEFRRYIENDLMKREPHPDAKPMGAFSIGRSAEEEPAR
Ga0310914_111871182	3300033289	Soil	MMNLFGAPGGKAFWKERAYMFGDEFRRYIDDDLIKREPHPDAKPMGVFSIAGVTD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters