Metagenome / Metatranscriptome Family F083311

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083311
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	91 residues
Representative Sequence	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPPAGQSTEPRA
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.76 %
% of genes near scaffold ends (potentially truncated)	30.97 %
% of genes from short scaffolds (< 2000 bps)	82.30 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.487 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.398 % of family members)
Environment Ontology (ENVO)	Unclassified (28.319 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 26.44% Coil/Unstructured: 73.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01381	HTH_3	2.65
PF07883	Cupin_2	1.77
PF00196	GerE	1.77
PF01266	DAO	1.77
PF02899	Phage_int_SAM_1	1.77
PF13560	HTH_31	1.77
PF13401	AAA_22	1.77
PF03704	BTAD	1.77
PF08031	BBE	0.88
PF01565	FAD_binding_4	0.88
PF01370	Epimerase	0.88
PF04264	YceI	0.88
PF12695	Abhydrolase_5	0.88
PF13489	Methyltransf_23	0.88
PF13424	TPR_12	0.88
PF14690	zf-ISL3	0.88
PF02784	Orn_Arg_deC_N	0.88
PF00486	Trans_reg_C	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.77
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.77
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.77
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.77
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.88
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.88
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.88
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.49 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.49 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.49 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	61.95 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.95 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	55.75 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	32.74 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	6.19 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	5.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.74 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	6.19 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.88 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.74 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	6.19 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.88 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.88 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.74 %
Nocardioides terrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	6.19 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	3.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Actinomadura logoneensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura logoneensis	0.88 %
Jatrophihabitans telluris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	0.88 %
Actinoplanes subtropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes subtropicus	0.88 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	32.74 %
Nocardioides terrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	6.19 %
Amycolatopsis sp. FDAARGOS 1241	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	3.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.77 %
Actinomadura logoneensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura logoneensis	0.88 %
Jatrophihabitans telluris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	0.88 %
Actinoplanes subtropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes subtropicus	0.88 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04YMRRX	Not Available	510	Open in IMG/M
2166559006\|FI_contig08902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300002245\|JGIcombinedJ26739_100360038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300005434\|Ga0070709_10088146	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300005435\|Ga0070714_100626467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1034	Open in IMG/M
3300005440\|Ga0070705_100447630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300005518\|Ga0070699_100007082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	9738	Open in IMG/M
3300005614\|Ga0068856_100490407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300005921\|Ga0070766_10217867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1200	Open in IMG/M
3300006163\|Ga0070715_10432356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300006175\|Ga0070712_100147959	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300006176\|Ga0070765_100097674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	2530	Open in IMG/M
3300006903\|Ga0075426_11248162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300007076\|Ga0075435_101620711	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010343\|Ga0074044_10546715	Not Available	756	Open in IMG/M
3300010360\|Ga0126372_11447995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300010362\|Ga0126377_12570445	Not Available	585	Open in IMG/M
3300010366\|Ga0126379_10180878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2005	Open in IMG/M
3300010373\|Ga0134128_10349070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	1654	Open in IMG/M
3300010876\|Ga0126361_10360664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes subtropicus	809	Open in IMG/M
3300010876\|Ga0126361_10982646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2285	Open in IMG/M
3300010937\|Ga0137776_1377086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300011107\|Ga0151490_1460716	Not Available	652	Open in IMG/M
3300011119\|Ga0105246_11938880	Not Available	567	Open in IMG/M
3300012351\|Ga0137386_10699894	Not Available	728	Open in IMG/M
3300012502\|Ga0157347_1057533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300015371\|Ga0132258_12339561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1339	Open in IMG/M
3300015371\|Ga0132258_12410175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura logoneensis	1318	Open in IMG/M
3300015372\|Ga0132256_101365450	Not Available	821	Open in IMG/M
3300015373\|Ga0132257_102301216	Not Available	698	Open in IMG/M
3300016341\|Ga0182035_10430722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300016357\|Ga0182032_10952170	Not Available	732	Open in IMG/M
3300016357\|Ga0182032_11121420	Not Available	675	Open in IMG/M
3300016371\|Ga0182034_11276053	Not Available	640	Open in IMG/M
3300016422\|Ga0182039_10680044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300016445\|Ga0182038_10732423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300017926\|Ga0187807_1012277	Not Available	2631	Open in IMG/M
3300017933\|Ga0187801_10096033	Not Available	1121	Open in IMG/M
3300017961\|Ga0187778_10021918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3913	Open in IMG/M
3300017972\|Ga0187781_11308319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	535	Open in IMG/M
3300018058\|Ga0187766_10014633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4477	Open in IMG/M
3300018058\|Ga0187766_10147767	Not Available	1458	Open in IMG/M
3300018086\|Ga0187769_10140732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1761	Open in IMG/M
3300018090\|Ga0187770_10137088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1856	Open in IMG/M
3300020579\|Ga0210407_10558387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300020580\|Ga0210403_10193588	Not Available	1668	Open in IMG/M
3300020581\|Ga0210399_10097527	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300020583\|Ga0210401_10537264	Not Available	1031	Open in IMG/M
3300021088\|Ga0210404_10484234	Not Available	698	Open in IMG/M
3300021178\|Ga0210408_10030784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	4248	Open in IMG/M
3300021178\|Ga0210408_11088839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300021178\|Ga0210408_11110651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	608	Open in IMG/M
3300021401\|Ga0210393_10674923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300021402\|Ga0210385_10071533	Not Available	2364	Open in IMG/M
3300021406\|Ga0210386_10434117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	1133	Open in IMG/M
3300021420\|Ga0210394_10299051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1412	Open in IMG/M
3300021432\|Ga0210384_10110410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2465	Open in IMG/M
3300021475\|Ga0210392_10097526	Not Available	1927	Open in IMG/M
3300021478\|Ga0210402_10523755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1100	Open in IMG/M
3300021478\|Ga0210402_10927877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	797	Open in IMG/M
3300021478\|Ga0210402_12022879	Not Available	502	Open in IMG/M
3300024222\|Ga0247691_1062964	Not Available	560	Open in IMG/M
3300025898\|Ga0207692_10171742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300025906\|Ga0207699_10352132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	1040	Open in IMG/M
3300025915\|Ga0207693_10162156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1759	Open in IMG/M
3300025928\|Ga0207700_11083657	Not Available	716	Open in IMG/M
3300026078\|Ga0207702_10100786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2549	Open in IMG/M
3300026088\|Ga0207641_12306587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300026557\|Ga0179587_11175338	Not Available	505	Open in IMG/M
3300027080\|Ga0208237_1056199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	584	Open in IMG/M
3300027172\|Ga0208098_1013398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides terrae	771	Open in IMG/M
3300027908\|Ga0209006_10036312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4455	Open in IMG/M
3300031231\|Ga0170824_104987833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300031543\|Ga0318516_10067806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1973	Open in IMG/M
3300031544\|Ga0318534_10806771	Not Available	527	Open in IMG/M
3300031546\|Ga0318538_10370089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300031564\|Ga0318573_10113629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1400	Open in IMG/M
3300031640\|Ga0318555_10400666	Not Available	743	Open in IMG/M
3300031679\|Ga0318561_10529509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300031713\|Ga0318496_10077253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1761	Open in IMG/M
3300031715\|Ga0307476_10407276	Not Available	1005	Open in IMG/M
3300031718\|Ga0307474_10120396	Not Available	1970	Open in IMG/M
3300031768\|Ga0318509_10645695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300031769\|Ga0318526_10094231	Not Available	1191	Open in IMG/M
3300031778\|Ga0318498_10313894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300031795\|Ga0318557_10205530	Not Available	899	Open in IMG/M
3300031797\|Ga0318550_10193708	Not Available	983	Open in IMG/M
3300031799\|Ga0318565_10378919	Not Available	686	Open in IMG/M
3300031819\|Ga0318568_10801255	Not Available	584	Open in IMG/M
3300031821\|Ga0318567_10229924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1039	Open in IMG/M
3300031879\|Ga0306919_11494888	Not Available	509	Open in IMG/M
3300031890\|Ga0306925_10114674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2879	Open in IMG/M
3300031894\|Ga0318522_10281700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300031912\|Ga0306921_12462911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300031959\|Ga0318530_10508992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300032008\|Ga0318562_10173130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1247	Open in IMG/M
3300032035\|Ga0310911_10811517	Not Available	541	Open in IMG/M
3300032054\|Ga0318570_10461476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300032066\|Ga0318514_10168484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1141	Open in IMG/M
3300032067\|Ga0318524_10323184	Not Available	799	Open in IMG/M
3300032174\|Ga0307470_11493258	Not Available	561	Open in IMG/M
3300032180\|Ga0307471_101003029	Not Available	1002	Open in IMG/M
3300032261\|Ga0306920_101613381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300032770\|Ga0335085_10051798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	5545	Open in IMG/M
3300032770\|Ga0335085_10354490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	1718	Open in IMG/M
3300032770\|Ga0335085_10687909	Not Available	1139	Open in IMG/M
3300032782\|Ga0335082_10031089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5660	Open in IMG/M
3300032783\|Ga0335079_10022911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7148	Open in IMG/M
3300032805\|Ga0335078_10145760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3356	Open in IMG/M
3300032829\|Ga0335070_10308888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1531	Open in IMG/M
3300032892\|Ga0335081_10087864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4677	Open in IMG/M
3300033134\|Ga0335073_10495593	Not Available	1397	Open in IMG/M
3300033158\|Ga0335077_11514390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.27%
Host-Associated	Host-Associated	9.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.61%
Plants	Host-Associated → Plants	9.73%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.54%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.04%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.77%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.77%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_03234780	2070309004	Green-Waste Compost	MDSYLMFLNCPAYMDNNGAARCGLPAEVHYRYTVNSTDGPLESAKISCPCGHHFNGPIEYLTVPEQPTATAVSASLPSPAGQSTEPRARSAEQRP
FI_00874330	2166559006	Grass Soil	MDSYLMFLNCPAYMDSNGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASPPPPAGQSTEPRTRRARERP
JGIcombinedJ26739_1003600382	3300002245	Forest Soil	MDSHAMFLNCPGYMDNDGATRCGLPAEVEYRYILNSTDGPLEGAKIRCARGHSFNGPIECLTVQPAAAAVSASPPPLTVSDAVPHL*
Ga0070709_100881464	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASPPPTGQSTEPRTRRAGERP*
Ga0070714_1006264672	3300005435	Agricultural Soil	MDSYLMFLNCPANVDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPTATAVSASLPPPAGQSTEPRARWAGERP*
Ga0070705_1004476301	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQSAATAESASPPPAGQSTEPRA*
Ga0070699_1000070826	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTLPEQPAAATESASPPPAGQSTEPRARWDGERP*
Ga0068856_1004904073	3300005614	Corn Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVRCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAASASPARSAGQSARPRDRWEEERS*
Ga0070766_102178673	3300005921	Soil	FLNCPAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTAPASPAAAPTVQSAPPHARGAGERS*
Ga0070715_104323562	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESARISCPRGHHFNGPIDCLTVPEQPAATAASASPPPTGQSTEPRA*
Ga0070712_1001479591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GGTRCGLPAEVEYRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPAATAVPASLPPPAGQSTEPRARWAGERP*
Ga0070765_1000976741	3300006176	Soil	MDSHATFLNCPAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTALASPAAAPTVQSAPPHARGAGERS*
Ga0075426_112481622	3300006903	Populus Rhizosphere	MDSHAMFLNCPAYMDKDGGTRCALPAEVEYRYTMNSTDGPLESAKISCPRGHHFNGPIDYLTVPEQPAATAVSASLPPSAGQSTELRARWAGERP*
Ga0075435_1016207112	3300007076	Populus Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIDYLTVPEQPAATAVSASLPPSAGQSTEPRARWAGERP*
Ga0074044_105467151	3300010343	Bog Forest Soil	MFLNCPAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPAATTAPASPAAAPTVQSAPPHGRGEGERS*
Ga0126372_114479952	3300010360	Tropical Forest Soil	MDSYLMFLNCPAYMDKDRAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIECLTVPAQPAAAAVSASPPPAGQSARPRARWDGERS*
Ga0126377_125704452	3300010362	Tropical Forest Soil	PGSTPAGASAPKENAMDNHAMFLNCPAYMDEDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPKQPIATTASASPPPAPIVQSAPPHARWAGERS*
Ga0126379_101808785	3300010366	Tropical Forest Soil	MDNHAMFLNCPAYMDEDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLALPEQPTATTASASPPPAPAVQSAPLHARWEGERS*
Ga0134128_103490701	3300010373	Terrestrial Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQSAATAESASPPPTGQSTEPRA*
Ga0126361_103606642	3300010876	Boreal Forest Soil	MDSHAMFLNCPAYMDNHGAARCGLPAEVEYRYILNSTDGPLEGAKIRCARGHSFNGPIECLTVQPAAAAVSASPPPPLT
Ga0126361_109826462	3300010876	Boreal Forest Soil	MDSHAMFLNCPAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTAPASPAAAPTVQSAPPHARGEGERS*
Ga0137776_13770862	3300010937	Sediment	MDSYLMFLNCPAYMDQDGAGRCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPPAGQNTEPRA*
Ga0151490_14607162	3300011107	Soil	DSYLMFLNCPANMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPAATAVPASLPPPGGQSTEPRTRWAEERP*
Ga0105246_119388801	3300011119	Miscanthus Rhizosphere	CAPASKENAMDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPAATAVPASLPPPGGQSTEPRARWAGERP*
Ga0137386_106998941	3300012351	Vadose Zone Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPVDCLTVPEQSAATAESASPPPTGQSTEPRA*
Ga0157347_10575331	3300012502	Arabidopsis Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAASASPPRSAGQSTRPRDRWEEERS*
Ga0132258_123395613	3300015371	Arabidopsis Rhizosphere	DKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPPAGQNTEPRA*
Ga0132258_124101751	3300015371	Arabidopsis Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPALTAESASPPPTGQSTEPRP*
Ga0132256_1013654502	3300015372	Arabidopsis Rhizosphere	MDSYLMFLNCPANLDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPALTAESASPPPTGQSTEPRP*
Ga0132257_1023012161	3300015373	Arabidopsis Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPTTTAVSASLPPSAGQSTESRARWAGEQP*
Ga0182035_104307222	3300016341	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPTGQSTEPRP
Ga0182032_109521702	3300016357	Soil	DSYLMFLNCPAHMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPCGHHFNGPIDCLTVPEQPTASAVSASLPSPAGHSTEPRA
Ga0182032_111214202	3300016357	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIECLTMPEQPAPAAVSASPPPAGPSARQRARWDGERS
Ga0182034_112760531	3300016371	Soil	MDSYLMFLNCPAYMYNDGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWDGERP
Ga0182039_106800441	3300016422	Soil	MDSYLMFLNCPAYMDKDRAARCGLPAEVHCRYTMNSTDGPLESAKISCPCGHHFNGPIDCLTVPEQPTATAVSASLPSPAGHSTEPRA
Ga0182038_107324232	3300016445	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASLPSPAGHSTEPRA
Ga0187807_10122774	3300017926	Freshwater Sediment	MDKDGGTRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTASASPPPTPTVQSAPPHARREGERP
Ga0187801_100960332	3300017933	Freshwater Sediment	MDKDGGTRCGLPAEVEYRYTMNSTAGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTASASPPPTPTVQSAPPHARREGERP
Ga0187778_100219183	3300017961	Tropical Peatland	MRHYHPQGLDAQRASASKENVLDIHAMFLTCPAYMDNDGTTRCGLPAEVEYRYTVNSTDGPLESAKISCPRGHHFNGPIECLLVPEQPAATAVSAGLPPPPTVQSARLRARWDGERS
Ga0187781_113083191	3300017972	Tropical Peatland	MDSYLMFLNCPAYTDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAAPASPPPAGQTTEPRA
Ga0187766_100146333	3300018058	Tropical Peatland	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEAPATAARSASPMRGRRD
Ga0187766_101477672	3300018058	Tropical Peatland	MDSRPMFLICPAYLDNDGARRCGLPAEVQVRYPMDSTGGPLQSAKISCPRGHHFSAPIEYLTVRQSPATAAISASPARGRRD
Ga0187769_101407322	3300018086	Tropical Peatland	MDSYLVFLNCPAYTDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAAPASPPPAGQTTEPRA
Ga0187770_101370883	3300018090	Tropical Peatland	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAAPASPPPAGQTTEPRA
Ga0210407_105583873	3300020579	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQSAATTESASPPRPA
Ga0210403_101935884	3300020580	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPVDCLTRPEQSAATAESASPPPTGQSTEPRA
Ga0210399_100975271	3300020581	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPVDCLTVPEQSAATAESASPPPTGQSTEPRA
Ga0210401_105372641	3300020583	Soil	NAMDSHATFLNCPAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTALASPAAAPTVQSAPPHARGVGERS
Ga0210404_104842342	3300021088	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPVDCLTVPEQPAATAESASPPPAGQSTEPRA
Ga0210408_100307841	3300021178	Soil	MDSYLMFLNCPANVDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPVEYLTVPEQPTVTAVSASLPPPAGQSTEPRAR
Ga0210408_110888391	3300021178	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPPAGQSTEPRA
Ga0210408_111106511	3300021178	Soil	MDSHATFLNCPAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTALASPAAAPTVQSAPPHARGVGERS
Ga0210393_106749231	3300021401	Soil	MDSHTMFLNCPAYMDNDGATRCGLPAEVECRYILNSTDGPLEGAKIRCARGHFFNGPIECLTVQPAAAAVSASPPPPLTVSGGVPHL
Ga0210385_100715332	3300021402	Soil	MDSHAMFLNCPAYMDKDGGTRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTAAASPPPAPTVQSAPPHARREGERP
Ga0210386_104341171	3300021406	Soil	MDSHAMFLNCPAYMDKDGGTRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTALASPAAAPT
Ga0210394_102990514	3300021420	Soil	MDSYLMFLNCPANVDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPVEYLTVPEQPTVTAVSASLPPPAGQSTEPRARWAGERP
Ga0210384_101104103	3300021432	Soil	MDSYLMFLNCPANVDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPVEYLTVPEQPTATTVSASLPPPAGQSTEPRARWAGERP
Ga0210392_100975263	3300021475	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHRRYTVNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQSAATAESASPPAGQSTEPRA
Ga0210402_105237553	3300021478	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQSAATAESAS
Ga0210402_109278771	3300021478	Soil	MDSHAMFLNCPADMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTASASPPPAPTAQSALPHGRQEGERP
Ga0210402_120228792	3300021478	Soil	MDSYLMFLNCPANMDNNGAARCGLPAEVHYRYTLNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPTATAVSAS
Ga0247691_10629641	3300024222	Soil	MDSHMMFLNCPANMDNNGAARCGLPAEVQYRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPTTTAVSASLPPSAGQSTESRARWAGEQP
Ga0207692_101717422	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESARISCPRGHHFNGPIDCLTVPEQPAATAASASPPPTGQSTEPRA
Ga0207699_103521321	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASPPPTGQSTEPRTRRAGERP
Ga0207693_101621561	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YMDSNGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASPPPTGQSTEPRTRRAGERP
Ga0207700_110836571	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFLNCPAYMDKDGGTRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIDYLTLPEQPTATTASASPPPAPTVQSAPPHARREGERP
Ga0207702_101007861	3300026078	Corn Rhizosphere	LNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASPPPTGQSTEPRTRRAGERP
Ga0207641_123065872	3300026088	Switchgrass Rhizosphere	MDSYLMFLNCPAYMDKDGAARCGLPAEVRCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAASASPARSAGQSARPRDRWEEERS
Ga0179587_111753381	3300026557	Vadose Zone Soil	MDSYLMFLNCPANVDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTASASPPPAPTVQSTPPHARREGQRP
Ga0208237_10561991	3300027080	Forest Soil	PGMADLDRQHRPNRRRTPGSTLTRASAPKENAMDSHATFLNCPAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTALASPAAAPTVQSAPPHARGVGERS
Ga0208098_10133981	3300027172	Forest Soil	PAYMDKDGATRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTAPASPAAAPTVQSAPPHARGEGERS
Ga0209006_100363122	3300027908	Forest Soil	MDSHAMFLNCPAYMDNDGATRCGLPAEVEYRYILNSTDGPLEGAKIRCARGHFFNGPIECLTVPPATAAVSASPPPPLTVSGAVPHL
Ga0170824_1049878331	3300031231	Forest Soil	MDSHAMFLNCPAYMDKDGGTRCGLPAEVEYRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPKQPTAAAVSASLPSPAGQSTEPRADGTP
Ga0318516_100678064	3300031543	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPCGHHFNGPIDCLTVPEQPTATAVSASLPSPAGHSTEPRA
Ga0318534_108067711	3300031544	Soil	SYLMFLNCPAYMDNNGAARCGLPAEVHCRYTMTSTDGPLESAKISCPRGHHFNGPIECLTMPEQPAPAAVSASPPPAGPSARQRARWDGERS
Ga0318538_103700892	3300031546	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWDGERP
Ga0318573_101136292	3300031564	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHCRYTMTSTDGPLESAKISCPRGHHFNGPIECLTMPEQPAPAAVSASPPPAGPSARQRARWDGERS
Ga0318555_104006661	3300031640	Soil	AYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPCGHHFNGPIDCLTVPEQPTATAVSASLPSPAGHSTEPRA
Ga0318561_105295092	3300031679	Soil	MDSYLMFLNCPAYMDKDGATRCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTMPEQPAATAESASPPPTGQSTEPRP
Ga0318496_100772532	3300031713	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPLAGQSERPRARWDGEPP
Ga0307476_104072761	3300031715	Hardwood Forest Soil	MDSYLMFLNCPANMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIEYLTVPEQPTATAVPASLPAPAGQSTEPRADGTP
Ga0307474_101203962	3300031718	Hardwood Forest Soil	MDSHAMFLNCPAYMDKDGGARCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTASASPPPAPTVQSAPPHARREGERP
Ga0318509_106456952	3300031768	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPLAGQSE
Ga0318526_100942312	3300031769	Soil	MDSYLMFLNCPAHMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPCGHHFNGPIEYLTVPEQPTATTVSASLPSPASQSTEPRARWAGERP
Ga0318498_103138942	3300031778	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPSAGQGTQPRP
Ga0318557_102055302	3300031795	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPCGHHFNGPIDCLTVPEQPTASAVSASLPSPAGHSTEPRA
Ga0318550_101937082	3300031797	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASLPSPAGHSTEPRA
Ga0318565_103789191	3300031799	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPCGHHFNGPIEYLTVPEQPTATTVSASLPSPASQS
Ga0318568_108012552	3300031819	Soil	MDGYLMFLNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIECLTVPEQPAAAAVSASPPPAGQSARPRARWEGERS
Ga0318567_102299241	3300031821	Soil	MDSYLMFLNCPAYMDKDGATRCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWDGERP
Ga0306919_114948881	3300031879	Soil	SGRRSAPKENAMDSYLMFLNCPAYMYNDGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWDGERP
Ga0306925_101146741	3300031890	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMTSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWDGERP
Ga0318522_102817001	3300031894	Soil	MDSYLMFLNCPANMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPLAGQSERPRAR
Ga0306921_124629111	3300031912	Soil	AMDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWDGERP
Ga0318530_105089921	3300031959	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHCRYTMTSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASLPSPAGHSTEPRA
Ga0318562_101731302	3300032008	Soil	MDSFLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWDGERP
Ga0310911_108115172	3300032035	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAVSASLPSPAGHSTEPRA
Ga0318570_104614761	3300032054	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLSVPEQPAATAESASPPPAGQSERPRARWD
Ga0318514_101684842	3300032066	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPLAGQSERPRARWDGEPP
Ga0318524_103231843	3300032067	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPCGHHFNGPIEYLTVPEQPTATTVSASLPSPASQSTEPRARWAGERP
Ga0307470_114932582	3300032174	Hardwood Forest Soil	MDSHAMFLNCPAYMDKDGGTRCGLPAEVEYRYTMNSTDGPLESAKISCPRRHHFNAPIEYLTLPEQPTATTASASPPPAPTVQRAPPHARREGERP
Ga0307471_1010030291	3300032180	Hardwood Forest Soil	MDSYLMFLNCPANMDNNGAARCGLPAEVHYRYTMNSTDGPLASAKISCPRGHHFNGPIEYLTVPEQPAATAVPASLPPPAGQSTEPRARWA
Ga0306920_1016133812	3300032261	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPTATAAPASPPPAGQNTEPRP
Ga0335085_100517983	3300032770	Soil	MDSFLMFLNCPAYMDKDGASRCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQSAATAESASPPPAGQGTEPRAWWAGERP
Ga0335085_103544902	3300032770	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPPAGQGTEPRP
Ga0335085_106879091	3300032770	Soil	LNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRSHHFNGPIECLTVPEQSAPATVSASPPPAGQSARPRARWDGERS
Ga0335082_100310893	3300032782	Soil	MDSYLMFLNCPAYMDNNGAARCGLPAEVHYRYTMNSTDGPLESAKISCPRGHHFNGPIECLTVPEQPAATAESASPPPAGQGTGPRP
Ga0335079_100229116	3300032783	Soil	MDSYLMFLNCPAYMDKDGAGRCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPPAGQGTEPRA
Ga0335078_101457601	3300032805	Soil	LTLPGAKDDMMHHNHPQSLDAQRASASKENVMDIHAMFLTCPAYMDNDGTTRCGLPAEVEYRYTVNSTDGPLESAKINCPRGHHFNGPIECLIVPEQPAATAVSASLPPPPTVQRARLRARWEGERA
Ga0335070_103088882	3300032829	Soil	MDSYLMFLNCPAFMDNNGAARCGLPAEVHSRYTMNSTDGPLESAKISCPRGHHFNGPIECLTVLEQSAAAAVSASPPPAGQSARPRARWDGERS
Ga0335081_100878644	3300032892	Soil	MHHNHPQSLDAQRASASKENVMDIHAMFLTCPAYMDNDGTTRCGLPAEVEYRYTVNSTDGPLESAKINCPRGHHFNGPIECLIVPEQPAATAVSASLPPPPTVQRARLRARWEGERA
Ga0335073_104955933	3300033134	Soil	MDSYLMFLNCPAYMDKDGAARCGLPAEVHFRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPGATAESASRPPAGQGTEPRP
Ga0335077_115143901	3300033158	Soil	NAMDSYLMFLNCPAYMDKDRAARCGLPAEVHCRYTMNSTDGPLESAKISCPRGHHFNGPIDCLTVPEQPAATAESASPPPAGQGTGPRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083311

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences