NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F083274

Metagenome Family F083274

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083274
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 55 residues
Representative Sequence VQVGDLVVRTYGEGQRPRALIVGWYKPSMAEVVWVGTDRVVQFGTKYLEVISASR
Number of Associated Samples 62
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 92.04 %
% of genes near scaffold ends (potentially truncated) 17.70 %
% of genes from short scaffolds (< 2000 bps) 69.03 %
Associated GOLD sequencing projects 46
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (69.912 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(46.903 % of family members)
Environment Ontology (ENVO) Unclassified
(96.460 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.150 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.61%    β-sheet: 37.35%    Coil/Unstructured: 59.04%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF13203DUF2201_N 5.31
PF09967DUF2201 2.65
PF07728AAA_5 2.65
PF030614HBT 1.77
PF01541GIY-YIG 0.88
PF07883Cupin_2 0.88
PF10431ClpB_D2-small 0.88
PF06745ATPase 0.88
PF01569PAP2 0.88
PF11160Hva1_TUDOR 0.88
PF00383dCMP_cyt_deam_1 0.88
PF00069Pkinase 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.54


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.91 %
All OrganismsrootAll Organisms30.09 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876008|none_p224107Not Available513Open in IMG/M
3300002511|JGI25131J35506_1010994All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300002514|JGI25133J35611_10183212All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax → unclassified Halobacteriovorax → Halobacteriovorax sp.557Open in IMG/M
3300002518|JGI25134J35505_10010842Not Available3037Open in IMG/M
3300002518|JGI25134J35505_10027658All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1638Open in IMG/M
3300002518|JGI25134J35505_10032613Not Available1448Open in IMG/M
3300002519|JGI25130J35507_1000424All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.13396Open in IMG/M
3300002519|JGI25130J35507_1023157All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1405Open in IMG/M
3300005425|Ga0066859_10085918Not Available948Open in IMG/M
3300005551|Ga0066843_10060854Not Available1119Open in IMG/M
3300005604|Ga0066852_10146492Not Available827Open in IMG/M
3300006164|Ga0075441_10006546Not Available5093Open in IMG/M
3300006736|Ga0098033_1005045Not Available4577Open in IMG/M
3300006736|Ga0098033_1006216All Organisms → Viruses → Predicted Viral4043Open in IMG/M
3300006738|Ga0098035_1152460Not Available785Open in IMG/M
3300006751|Ga0098040_1097370Not Available888Open in IMG/M
3300006753|Ga0098039_1214003All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon651Open in IMG/M
3300006754|Ga0098044_1267471Not Available659Open in IMG/M
3300006789|Ga0098054_1170033Not Available800Open in IMG/M
3300006789|Ga0098054_1268507Not Available613Open in IMG/M
3300006923|Ga0098053_1067277Not Available731Open in IMG/M
3300008050|Ga0098052_1012333Not Available4346Open in IMG/M
3300008050|Ga0098052_1121039Not Available1053Open in IMG/M
3300008050|Ga0098052_1292165Not Available617Open in IMG/M
3300008216|Ga0114898_1003518Not Available7559Open in IMG/M
3300008216|Ga0114898_1024404Not Available2069Open in IMG/M
3300008216|Ga0114898_1202782Not Available549Open in IMG/M
3300008217|Ga0114899_1076873Not Available1149Open in IMG/M
3300008219|Ga0114905_1001695Not Available11893Open in IMG/M
3300008219|Ga0114905_1066902All Organisms → Viruses → Predicted Viral1292Open in IMG/M
3300008219|Ga0114905_1083338All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300008219|Ga0114905_1117552Not Available908Open in IMG/M
3300008220|Ga0114910_1044426Not Available1444Open in IMG/M
3300008220|Ga0114910_1201101Not Available548Open in IMG/M
3300008952|Ga0115651_1327675Not Available920Open in IMG/M
3300009173|Ga0114996_10004081Not Available17718Open in IMG/M
3300009173|Ga0114996_10434218Not Available1001Open in IMG/M
3300009370|Ga0118716_1189551All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium982Open in IMG/M
3300009414|Ga0114909_1108347Not Available757Open in IMG/M
3300009418|Ga0114908_1003820Not Available6877Open in IMG/M
3300009418|Ga0114908_1028726All Organisms → cellular organisms → Bacteria2115Open in IMG/M
3300009425|Ga0114997_10100204All Organisms → cellular organisms → Bacteria1770Open in IMG/M
3300009605|Ga0114906_1019860Not Available2767Open in IMG/M
3300009605|Ga0114906_1027729All Organisms → cellular organisms → Bacteria2277Open in IMG/M
3300009605|Ga0114906_1068493All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300009605|Ga0114906_1073851Not Available1259Open in IMG/M
3300009605|Ga0114906_1238770Not Available596Open in IMG/M
3300009786|Ga0114999_10089859Not Available2697Open in IMG/M
3300010883|Ga0133547_10868116Not Available1762Open in IMG/M
3300017775|Ga0181432_1000478Not Available8394Open in IMG/M
3300017775|Ga0181432_1001458All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon5081Open in IMG/M
3300017775|Ga0181432_1010623All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium2238Open in IMG/M
3300017775|Ga0181432_1015483Not Available1917Open in IMG/M
3300017775|Ga0181432_1033232Not Available1391Open in IMG/M
3300017775|Ga0181432_1055352Not Available1118Open in IMG/M
3300017775|Ga0181432_1058812Not Available1089Open in IMG/M
3300017775|Ga0181432_1065667All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300017775|Ga0181432_1093938Not Available888Open in IMG/M
3300017775|Ga0181432_1099490Not Available865Open in IMG/M
3300017775|Ga0181432_1145843Not Available725Open in IMG/M
3300017775|Ga0181432_1155646Not Available704Open in IMG/M
3300017775|Ga0181432_1159329Not Available697Open in IMG/M
3300017775|Ga0181432_1240898Not Available570Open in IMG/M
3300017775|Ga0181432_1273756All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300017775|Ga0181432_1277135Not Available531Open in IMG/M
3300017775|Ga0181432_1286416Not Available522Open in IMG/M
3300020458|Ga0211697_10511528All Organisms → cellular organisms → Bacteria501Open in IMG/M
(restricted) 3300024517|Ga0255049_10318093Not Available715Open in IMG/M
3300025066|Ga0208012_1004930All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2731Open in IMG/M
3300025072|Ga0208920_1000459All Organisms → cellular organisms → Bacteria10648Open in IMG/M
3300025078|Ga0208668_1031469Not Available1034Open in IMG/M
3300025078|Ga0208668_1047258Not Available804Open in IMG/M
3300025112|Ga0209349_1044842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium1409Open in IMG/M
3300025122|Ga0209434_1000363Not Available23006Open in IMG/M
3300025122|Ga0209434_1003456Not Available6764Open in IMG/M
3300025122|Ga0209434_1014655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2788Open in IMG/M
3300025122|Ga0209434_1178054Not Available563Open in IMG/M
3300025125|Ga0209644_1106657Not Available664Open in IMG/M
3300025125|Ga0209644_1107183All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300025131|Ga0209128_1009935All Organisms → cellular organisms → Bacteria4815Open in IMG/M
3300025131|Ga0209128_1015972All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax → unclassified Halobacteriovorax → Halobacteriovorax sp.3444Open in IMG/M
3300025133|Ga0208299_1000845Not Available25346Open in IMG/M
3300025133|Ga0208299_1010771Not Available4547Open in IMG/M
3300025133|Ga0208299_1034217Not Available2079Open in IMG/M
3300025141|Ga0209756_1077892Not Available1498Open in IMG/M
3300025141|Ga0209756_1277457Not Available602Open in IMG/M
3300025251|Ga0208182_1063554All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300025267|Ga0208179_1021137All Organisms → Viruses → Predicted Viral1778Open in IMG/M
3300025267|Ga0208179_1114608All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300025274|Ga0208183_1012804Not Available2029Open in IMG/M
3300025280|Ga0208449_1021987All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1990Open in IMG/M
3300025282|Ga0208030_1008110Not Available4078Open in IMG/M
3300025282|Ga0208030_1031695All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1631Open in IMG/M
3300025305|Ga0208684_1023082All Organisms → Viruses → Predicted Viral1928Open in IMG/M
3300025305|Ga0208684_1042120Not Available1292Open in IMG/M
3300025305|Ga0208684_1080789All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300025873|Ga0209757_10180088Not Available666Open in IMG/M
3300026205|Ga0208406_1066030Not Available863Open in IMG/M
3300027714|Ga0209815_1007280Not Available5573Open in IMG/M
3300027779|Ga0209709_10191183Not Available961Open in IMG/M
3300027844|Ga0209501_10010475Not Available7804Open in IMG/M
3300027847|Ga0209402_10211817Not Available1257Open in IMG/M
3300028039|Ga0256380_1005550Not Available1911Open in IMG/M
3300028039|Ga0256380_1011760All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium1403Open in IMG/M
3300031605|Ga0302132_10494667Not Available538Open in IMG/M
3300031627|Ga0302118_10005972Not Available6155Open in IMG/M
3300031627|Ga0302118_10361462Not Available659Open in IMG/M
3300031757|Ga0315328_10556194Not Available658Open in IMG/M
3300031801|Ga0310121_10033089Not Available3611Open in IMG/M
3300031801|Ga0310121_10318305Not Available906Open in IMG/M
3300032132|Ga0315336_1015515Not Available5606Open in IMG/M
3300032278|Ga0310345_11604897Not Available636Open in IMG/M
3300034629|Ga0326756_018683Not Available807Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine46.90%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean24.78%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater15.04%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.65%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.77%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.77%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.77%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.77%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.89%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.89%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine0.89%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876008Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-3LG-Deep1200EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300005425Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199EnvironmentalOpen in IMG/M
3300005551Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89AEnvironmentalOpen in IMG/M
3300005604Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008952Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7umEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009370Combined Assembly of Gp0127930, Gp0127931EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020458Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026205Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028039Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300mEnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300032132Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_22410722236876008Marine EstuarineLKAGDLVARTYGEGQRPVALLVGWYSTTMAEVIWAGTDRVVQFGTEYLEVISESR
JGI25131J35506_101099453300002511MarineVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFSTEYLEVLNESR*
JGI25133J35611_1018321223300002514MarineMKVGDLVVRTYGEGQRPVALLIGWWNPGAQMERLLAEVIWVGGSGRIVQFGAKYLETI
JGI25134J35505_1001084243300002518MarineVKVGDLVVRTYGEGQHPMAIIVGWVPNRRNYVKIKWLGSDRIVQFSIKYLEVISASR*
JGI25134J35505_1002765873300002518MarineVKVGDLVVRTYGEGQHPMAIIVGWVPNRRNYVKIKWLGSDRIVQFSIK
JGI25134J35505_1003261343300002518MarineVQVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKYLEMLNASR*
JGI25130J35507_100042413300002519MarineQVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKYLEMLNASR*
JGI25130J35507_102315723300002519MarineMKVGDLVARTYGEGQRPMAIIVGWWSDSMAEVIWLGTDKIVQFGTEYLEVISESL*
Ga0066859_1008591833300005425MarineVKVGDLVVRTYGEGQRPMAIIVGWVPNRRNYVKIKWLGSDRIVQFSIKYLEVISASR*
Ga0066843_1006085443300005551MarineVKIGDLVTRTYGEGQRPWAIIVGWYSDTMAEVVWLGTDRVVQFGTEYLEVISEGR*
Ga0066852_1014649243300005604MarineMKVGDLVARTYGEGQRPAAIIVGWYSDTMAEVVWFGTDRVVQFGTEYLEVISEGR*
Ga0075441_10006546153300006164MarineVKVGDLVARTYGEGQRPMAIIVGWWQPAGRTNALPIAEVIWLGADRIVQFGAEYLEVISANR*
Ga0098033_1005045103300006736MarineMKIGDLVVRTYGEGQRPIALVVGWSGDYLAKVIWLGTNIRVVEFGTKYLEPINESR*
Ga0098033_100621653300006736MarineMQVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKYLEMLNASR*
Ga0098035_115246043300006738MarineMKVGDLVVRTYGEGQRPMAIIIGWWSDAMAEVIWLGTGRVVQFGAEYLEVISESR*
Ga0098040_109737033300006751MarineVKVGDLVVRTYGEGQRPVALLVGWYSTMTAEVIWTGSDRIVQFAAKHLETLDNE*
Ga0098039_121400323300006753MarineMAGESMKVGDLVVRTYGEGQRPTAIIVGWWSPEMAEVMWAGTDRVVQFGSKHLKVINASR
Ga0098044_126747133300006754MarineMKVGDLVVRTYGEGQRPVALIVGMRPTPTVAEVIWQGTDKVELFAKKYLELISASR*
Ga0098054_117003313300006789MarineAFQKRKIGVNQMQVGKLVKDLQVGDLVERTYGEGQRPIAIIVGWYKPTMAEVIWQGTDRVVQFGTKYLEVIQCK*
Ga0098054_126850733300006789MarineMQVGDLVVRTYGEGQRPVALIVGWYKPTMAEVIWLGSDRIVQFGAKYLEVIKCK*
Ga0098053_106727713300006923MarineVGDLVERTYGEGQRPIAIIVGWYKPTMAEVIWQGTDRVVQFGTKYLEVIQCK*
Ga0098052_101233383300008050MarineMQVGKLVKDLQVGDLVERTYGEGQRPIAIIVGWYKPTMAEVIWQGTDRVVQFGTKYLEVIQCK*
Ga0098052_112103943300008050MarineMAGESMKVGDLVVRTYGEGQRPTAIIVGWWSPEMAEVMWAGTDRVVQFGSK
Ga0098052_129216513300008050MarineMKVGDLVVRTYGEGQRPVALIVGMRPTPTVAEVIWQGTDKVELFAKKYLELISAS
Ga0114898_100351813300008216Deep OceanVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFATK
Ga0114898_102440423300008216Deep OceanVQVGDLVVRTYGEGQRPRALIVGWYKPSMAEVVWVGTDRVVQFGTKYLEVISASR*
Ga0114898_120278213300008216Deep OceanMKVGDLVVRTYGEGQRPVATIVGWRNTRIVEVIWVGSSEIVQFAAKYLEVLND*
Ga0114899_107687353300008217Deep OceanMKIGDLVERTYGEGQRPVALIVGWYKPISAEVIWQGTDKVVQFAKKYLKVINESR*
Ga0114905_1001695113300008219Deep OceanMKVGDLVVRTYGEGQRPTALIVGWYKPRTHKNLAEVIWTGTDKIVQFGTKYLEVISANR*
Ga0114905_106690213300008219Deep OceanMQVGDLVVRTYGEFPRPMAIIVGWYNTKMAEVIWTGTNKVRQFGAKYLEVISENR*
Ga0114905_108333853300008219Deep OceanVQVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFATKYLEVLNESR*
Ga0114905_111755233300008219Deep OceanMLVGDLVMRTYGESQRPVALIVGWYKPSVAEVIWLSADKRVHTIGRKHLEVISESR*
Ga0114910_104442623300008220Deep OceanVQVGDLVVRTYGEGQRPVATIVGWRNTRIVEVIWVGSSEIVQFAAKYLEVLND*
Ga0114910_120110123300008220Deep OceanMKIGDLVERTYGEGQRPVALIVGWYKPISAEVIWQGTDKVVQFAKKYLKVINASR*
Ga0115651_132767513300008952MarineMKVGDLVVRTYGEGQRPMAIIVGWYTPISAEVTWLGTDKVELFAKKYLEKIKCK*
Ga0114996_10004081153300009173MarineMEIGDLVVRTYGEGQRPTALIVDWYKPTMAEVIWCGSDRVVQFGTEYLEVINESR*
Ga0114996_1043421823300009173MarineMKVGDLVARTYGEGQRPWAIIVGWYNDTMAEVIWSGADRIVQFGTEYLEVISEGR*
Ga0118716_118955123300009370MarineVKIGDLVARTYGEGQRPAAIIVGWYSDTMAEVIWLGTDRVVQFGTEYLEVINEGR*
Ga0114909_110834713300009414Deep OceanMKVGDLVERTFGEGQRPVALIVGWYTPISAEVIWQGTDKVVQFAKKYLKVINESR*
Ga0114908_1003820193300009418Deep OceanMQVGDLVMRTYGEGQRPVALIVGWYKPSVAEVIWLGADKRVHTIGRKHLEVISESR*
Ga0114908_102872623300009418Deep OceanMQVGDLVVRTYGEFPRPMAIIVGWYNTKMAEVIWTGTDKVRQFGAKYLEVINASR*
Ga0114997_1010020433300009425MarineMKVGDLVVRTYGEGQRPWALLVGLHDHASMAEVIWTGSDRIVQCGTYYLEVLSESR*
Ga0114906_1019860103300009605Deep OceanVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFATKYLEVLNESR*
Ga0114906_102772953300009605Deep OceanMQVGDLVMRTYGEGQRPVALIVGWYKPSVAEVIWLSADKRVHTIGRKHLEVISESR*
Ga0114906_106849323300009605Deep OceanMKVGDLVVRTYGEGQRPVATIVGWRNTRIVEVIWVGSIEIVQFAAKYLEVLNESR*
Ga0114906_107385123300009605Deep OceanMKIGDLVVRTYGEGQRPVAILIGWWNDTMVEVIWCGTDRIVQFGTEYLEVFSESR*
Ga0114906_123877033300009605Deep OceanVQVGDLVVRTYGEGQRPIAIIVGWHKEPIMAEVIWTGTDRIVQFGTKYLELINASR*
Ga0114999_1008985973300009786MarineVKVGDLVARTYGEGQRPAAIIVGWYSNTMAEVVWLGTNRVVQFGTEYLEVISEGR*
Ga0133547_1086811663300010883MarineMKIGDLVVRAYGEGQRPTALIVGWYKPTMAEVLWTGTNRIVQFGTKYLEVVSASR*
Ga0181432_100047813300017775SeawaterVKVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKY
Ga0181432_1001458193300017775SeawaterVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKYLEMLSASR
Ga0181432_101062313300017775SeawaterVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGS
Ga0181432_101548343300017775SeawaterMKVGDLVVRTYGEGQRPTAIIVGWYNDRIADVMWAGADRVVQFGLKYLEPVNECR
Ga0181432_103323213300017775SeawaterMQVGDLVVRTYGEGQRPTAIIVGWYTPISAEVIWQGTDKVELFAKKYLEVISASR
Ga0181432_105535213300017775SeawaterRLSMQVGDLVARTYGEGQRPVAIIVGWYKPTMAEVIWLGTDRIVQFGAEYLEVINASR
Ga0181432_105881213300017775SeawaterGDLVVRTYGEGQRPMAIIVGWYTPISAEVIWLGTDKVVQFGTKYLEKINASR
Ga0181432_106566743300017775SeawaterVQVGDLVVRTYGEGQRPRALVVGFGYKPSIAKIIWLGTDGIIQFGTSHLKVINASR
Ga0181432_109393823300017775SeawaterMKVGDLVARTYGEGQRPMALIVGWYKPTVAEVRWLGTDKVVQFAKKHLEVISANR
Ga0181432_109949043300017775SeawaterMKVGDLVVRTYGEGQRPVALLVGWYKKTVAEVIWLGTDRIVQFGTKYLETVNESR
Ga0181432_114584313300017775SeawaterMQVGDLVVRTYGEFPRPMAIIVGWYNTKMAEVIWAGTDKVHQIGAEYLE
Ga0181432_115564623300017775SeawaterVKVGDLVVRTYGEGRRPTAIIVGWYDDRMAEIMWVGIDGVFQFGAKYLEVISAAR
Ga0181432_115932913300017775SeawaterMQVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKY
Ga0181432_124089823300017775SeawaterMKIGDLVARTYGEGQRPMAIVVGWRNNNLAEVIWLGTNRIVQFGAEYLEVISASR
Ga0181432_127375623300017775SeawaterMKVGDLVVRTYGEGQRPMAIIVGRRNTRIVEVIWVGYSEIVQFAAKYLEVLNESR
Ga0181432_127713513300017775SeawaterVKIGDLVARTYGEGQRPMAIIVGWWQPAGRHPAMPFAEIIWLGTDRIVRFGAEYLEVISASR
Ga0181432_128641613300017775SeawaterMQVGDLVVRTYGEGQRPTALIVGWYKPSVAEVIWQGTDKVVQFAKKYLEVIK
Ga0211697_1051152823300020458MarineVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFATKYLEVLNESR
(restricted) Ga0255049_1031809323300024517SeawaterMQVGDLVARTYGEGQRPVALIVGWYKPTMAEVIWLGSDRIVQFGTKYLEVIQCK
Ga0208012_100493093300025066MarineMKVGDLVVRTYGEGQRPVALIVGMRPTPTVAEVIWQGTDKVELFAKKYLELISASR
Ga0208920_100045953300025072MarineVKVGDLVVRTYGEGQRPMAIIVGWVPNRRNYVKIKWLGSDRIVQFSIKYLEVISASR
Ga0208668_103146943300025078MarineMQVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKYLEMLNASR
Ga0208668_104725823300025078MarineMKIGDLVVRTYGEGQRPIALVVGWSGDYLAKVIWLGTNIRVVEFGTKYLEPINESR
Ga0209349_104484253300025112MarineVKVGDLVVRTYGEGQRPMAIIVGWVPNRRNYVKIKWLGSDRIVQFSIDYLEVISASR
Ga0209434_1000363133300025122MarineVQVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKYLEMLNASR
Ga0209434_1003456103300025122MarineMKVGDLVARTYGEGQRPMAIIVGWWSDSMAEVIWLGTDKIVQFGTEYLEVISESL
Ga0209434_101465563300025122MarineMKIGDLVVRTYGEGQRPIALVVGWSGDYLAKVIWLGTNTRVVEFGTKYLEPINESR
Ga0209434_117805433300025122MarineFLQLLKRVEYKMKVGDLVVRTYGEGQRPMAIIIGWWSDAMAEVIWLGTGRVVQFGAEYLEVISESR
Ga0209644_110665733300025125MarineMQVGDLVVRTYGEFPRPMAIIVGWYNTKMAEVMWTGTDKVRQFGTEYLEVISASR
Ga0209644_110718333300025125MarineVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFSTEYLEVLNESR
Ga0209128_1009935153300025131MarineVKVGDLVVRTYGEGQHPMAIIVGWVPNRRNYVKIKWLGSDRIVQFSIKYLEVISASR
Ga0209128_1015972123300025131MarineMKVGDLVVRTYGEGQRPVALLIGWWNPGAQMERLLAEVIWVGGSGRIVQFGAKYLETISESR
Ga0208299_1000845483300025133MarineMQVGDLVVRTYGEGQRPRALVVGFGYKPSIAKIIWLGTDAIIQFGTSHLEVIQCKEAI
Ga0208299_101077193300025133MarineMQVGKLVKDLQVGDLVERTYGEGQRPIAIIVGWYKPTMAEVIWQGTDRVVQFGTKYLEVIQCK
Ga0208299_103421753300025133MarineMQVGDLVVRTYGEGQRPVALIVGWYKPTMAEVIWLGSDRIVQFGAKYLEVIKCK
Ga0209756_107789253300025141MarineMKVGDLVVRTYGEGQRPMAIIVGWWQTAGRNAALPIAEVIWQGTDRVVLFGAQYLEVISESR
Ga0209756_127745713300025141MarineQVGDLVVRTYGEGQRPRALIVGWYKPSVAEVIWLGTDEVQQFAKKYLEMLNASR
Ga0208182_106355423300025251Deep OceanMKVGDLVVRTYGEGQRPVATIVGWRNTRIVEVIWVGSSEIVQFAAKYLEVLNESR
Ga0208179_102113773300025267Deep OceanVQVGDLVVRTYGEGQRPRALIVGWYKPSMAEVVWVGTDRVVQFGTKYLE
Ga0208179_111460823300025267Deep OceanMKVGDLVVRTYGEGQRPVATIVGWRNTRIVEVIWVGSSEIVQFAAKYLEVLND
Ga0208183_101280433300025274Deep OceanMKIGDLVERTYGEGQRPVALIVGWYKPISAEVIWQGTDKVVQFAKKYLKVINASR
Ga0208449_102198763300025280Deep OceanMQVGDLVVRTYGEFPRPMAIIVGWYNTKMAEVIWTGTNKVRQFGAKYLEVISENR
Ga0208030_100811093300025282Deep OceanVQVGDLVVRTYGEGQRPRALIVGWYKPSMAEVVWVGTDRVVQFGTKYLEVISASR
Ga0208030_103169533300025282Deep OceanMQVGDLVVRTYGEFPRPMAIIVGWYNTKMAEVIWTGTDKVRQFGAKYLEVINASR
Ga0208684_102308213300025305Deep OceanMKVGDLVVRTYGEGQRPTALIVGWYKPRTHKNLAEVIWTGTDKIVQFGTKYLEVISANR
Ga0208684_104212033300025305Deep OceanMKIGDLVERTYGEGQRPVALIVGWYKPISAEVIWQGTDKVVQFAKKYLKVINESR
Ga0208684_108078913300025305Deep OceanVQVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFATKYLEVLNESR
Ga0209757_1018008813300025873MarineVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFSTEY
Ga0208406_106603023300026205MarineVKIGDLVTRTYGEGQRPWAIIVGWYSDTMAEVVWLGTDRVVQFGTEYLEVISEGR
Ga0209815_100728033300027714MarineVKVGDLVARTYGEGQRPMAIIVGWWQPAGRTNALPIAEVIWLGADRIVQFGAEYLEVISANR
Ga0209709_1019118313300027779MarineMKVGDLVVRTYGEGQRPWALLVGLHDHASMAEVIWTGSDRIVQCGTYYLEVLSESR
Ga0209501_10010475123300027844MarineMEIGDLVVRTYGEGQRPTALIVDWYKPTMAEVIWCGSDRVVQFGTEYLEVINESR
Ga0209402_1021181733300027847MarineVKVGDLVARTYGEGQRPAAIIVGWYSNTMAEVVWLGTNRVVQFGTEYLEVISEGR
Ga0256380_100555043300028039SeawaterMQVGDLVERTYGEGQRPIAVIVGWYSKPIMAEVIWLGTDKVVQFGTSYLEVINASR
Ga0256380_101176023300028039SeawaterMTIPPQKYKIGDLVARTYGEGQRPVAIIVGWYNTTMAEVIWAGTDRVVQFGTEYLEVINENR
Ga0302132_1049466733300031605MarineMKIGDLVVRAYGEGQRPTALIVGWYKPTMAEVLWTGTNRIVQFGTKYLEVVSASR
Ga0302118_1000597273300031627MarineMKVGDLVVRTYGEGRRPWALLVGWYNPSIAEVIWHGTDRVVQFGSRWLEVLSESR
Ga0302118_1036146233300031627MarineMQIGDLVVRTYGEGQRPIALIVGWYKASMAEVLWTGTDRVVQFGTKYLEVVSANR
Ga0315328_1055619423300031757SeawaterMKVGDLVVRTYGEGQRPMAIIVGWYTPISAEVIWLGTDKVVQFGTKYLEKINASR
Ga0310121_1003308933300031801MarineVKVGDLVARTYGEGQRPWAIIVGWWKDSMAEVIWLGTDRIVQFGAEYLEVVSESR
Ga0310121_1031830543300031801MarineVKVGDLVARAYGEGQRPMAIIVGWWNDSMAEVIWLGADRIVQFGAEYLEVVSESR
Ga0315336_101551523300032132SeawaterVQVGDLVVRTYGEGQRPMAIIVGWYKPTMAEVIWLGTSRIVQFGTKYLEAISASR
Ga0310345_1160489723300032278SeawaterMKVGDLVARTYGEGQRPMALIVGWYKPTVAEVRWLGTDKVVQFAKKHLEVISASR
Ga0326756_018683_122_2893300034629Filtered SeawaterVKVGDLVVRTYGEGQRPMAIIVGWVNLDYVKIKWLGSDRIVQFGIEYLEVLNESR


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