NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F083243

Metagenome Family F083243

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083243
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 48 residues
Representative Sequence MANTKKIFDYTKRKDGFMGRENRRYWLVNTKTGKRKRITEEQYHDTRY
Number of Associated Samples 78
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 27.43 %
% of genes near scaffold ends (potentially truncated) 23.01 %
% of genes from short scaffolds (< 2000 bps) 96.46 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (90.265 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(66.372 % of family members)
Environment Ontology (ENVO) Unclassified
(93.805 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.150 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.53%    β-sheet: 23.68%    Coil/Unstructured: 65.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A90.27 %
All OrganismsrootAll Organisms9.73 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876008|none_p464270Not Available561Open in IMG/M
3300000116|DelMOSpr2010_c10098966Not Available1104Open in IMG/M
3300001450|JGI24006J15134_10112906Not Available954Open in IMG/M
3300001450|JGI24006J15134_10215187Not Available575Open in IMG/M
3300001450|JGI24006J15134_10236279Not Available533Open in IMG/M
3300001589|JGI24005J15628_10178536All Organisms → Viruses → environmental samples → uncultured virus615Open in IMG/M
3300001717|JGI24522J20083_1010790Not Available536Open in IMG/M
3300001728|JGI24521J20086_1008484Not Available901Open in IMG/M
3300001728|JGI24521J20086_1015074Not Available611Open in IMG/M
3300001731|JGI24514J20073_1019999Not Available607Open in IMG/M
3300001743|JGI24515J20084_1004023Not Available1332Open in IMG/M
3300002511|JGI25131J35506_1025043Not Available821Open in IMG/M
3300002511|JGI25131J35506_1049588Not Available582Open in IMG/M
3300002511|JGI25131J35506_1052151Not Available567Open in IMG/M
3300002511|JGI25131J35506_1064117Not Available512Open in IMG/M
3300002760|JGI25136J39404_1025626Not Available1077Open in IMG/M
3300002760|JGI25136J39404_1045924Not Available809Open in IMG/M
3300002760|JGI25136J39404_1048114Not Available790Open in IMG/M
3300002760|JGI25136J39404_1071135Not Available649Open in IMG/M
3300002760|JGI25136J39404_1090179All Organisms → Viruses → environmental samples → uncultured virus576Open in IMG/M
3300004448|Ga0065861_1019869Not Available703Open in IMG/M
3300006164|Ga0075441_10341246Not Available545Open in IMG/M
3300006165|Ga0075443_10019207All Organisms → cellular organisms → Bacteria2295Open in IMG/M
3300006311|Ga0068478_1196573Not Available880Open in IMG/M
3300006311|Ga0068478_1227537Not Available689Open in IMG/M
3300006325|Ga0068501_1108161Not Available1398Open in IMG/M
3300006338|Ga0068482_1514953Not Available600Open in IMG/M
3300006340|Ga0068503_10243221Not Available2165Open in IMG/M
3300006736|Ga0098033_1040549Not Available1387Open in IMG/M
3300006736|Ga0098033_1195903Not Available560Open in IMG/M
3300006738|Ga0098035_1139581Not Available828Open in IMG/M
3300006738|Ga0098035_1188572All Organisms → Viruses → environmental samples → uncultured virus691Open in IMG/M
3300006750|Ga0098058_1035753Not Available1431Open in IMG/M
3300006752|Ga0098048_1232050Not Available541Open in IMG/M
3300006753|Ga0098039_1276787Not Available562Open in IMG/M
3300006793|Ga0098055_1190110Not Available782Open in IMG/M
3300006802|Ga0070749_10274058Not Available951Open in IMG/M
3300006802|Ga0070749_10713298Not Available536Open in IMG/M
3300006919|Ga0070746_10109221Not Available1374Open in IMG/M
3300006923|Ga0098053_1042455All Organisms → Viruses → environmental samples → uncultured virus950Open in IMG/M
3300006923|Ga0098053_1125042Not Available515Open in IMG/M
3300006925|Ga0098050_1138763Not Available614Open in IMG/M
3300006926|Ga0098057_1172265Not Available528Open in IMG/M
3300006929|Ga0098036_1236974Not Available552Open in IMG/M
3300008050|Ga0098052_1267377Not Available651Open in IMG/M
3300008470|Ga0115371_11368781Not Available628Open in IMG/M
3300009422|Ga0114998_10169914Not Available1044Open in IMG/M
3300009422|Ga0114998_10317110Not Available730Open in IMG/M
3300009526|Ga0115004_10203897Not Available1184Open in IMG/M
3300009622|Ga0105173_1019341Not Available1020Open in IMG/M
3300010150|Ga0098056_1177484Not Available715Open in IMG/M
3300010151|Ga0098061_1323303Not Available528Open in IMG/M
3300010155|Ga0098047_10399534All Organisms → Viruses → environmental samples → uncultured virus514Open in IMG/M
3300012950|Ga0163108_11034518Not Available530Open in IMG/M
3300017702|Ga0181374_1032006Not Available919Open in IMG/M
3300017721|Ga0181373_1012822Not Available1571Open in IMG/M
3300017726|Ga0181381_1111117Not Available577Open in IMG/M
3300017773|Ga0181386_1199313Not Available602Open in IMG/M
3300017775|Ga0181432_1236187Not Available576Open in IMG/M
3300017775|Ga0181432_1245727All Organisms → Viruses → environmental samples → uncultured virus564Open in IMG/M
3300020421|Ga0211653_10062090Not Available1681Open in IMG/M
3300021443|Ga0206681_10166377Not Available863Open in IMG/M
3300021443|Ga0206681_10297545Not Available626Open in IMG/M
3300021791|Ga0226832_10323885Not Available633Open in IMG/M
3300021977|Ga0232639_1273325Not Available647Open in IMG/M
3300022053|Ga0212030_1053878Not Available572Open in IMG/M
3300022178|Ga0196887_1081455Not Available756Open in IMG/M
3300025042|Ga0207889_1008685Not Available959Open in IMG/M
3300025043|Ga0207907_119744Not Available618Open in IMG/M
3300025045|Ga0207901_1009835Not Available1339Open in IMG/M
3300025045|Ga0207901_1029895Not Available740Open in IMG/M
3300025045|Ga0207901_1042611Not Available607Open in IMG/M
3300025045|Ga0207901_1043302Not Available601Open in IMG/M
3300025045|Ga0207901_1058986Not Available502Open in IMG/M
3300025046|Ga0207902_1020612Not Available773Open in IMG/M
3300025049|Ga0207898_1034003All Organisms → Viruses → environmental samples → uncultured virus646Open in IMG/M
3300025052|Ga0207906_1009881Not Available1345Open in IMG/M
3300025066|Ga0208012_1065205Not Available515Open in IMG/M
3300025072|Ga0208920_1015222Not Available1693Open in IMG/M
3300025072|Ga0208920_1042085Not Available928Open in IMG/M
3300025082|Ga0208156_1096792Not Available533Open in IMG/M
3300025103|Ga0208013_1047471Not Available1175Open in IMG/M
3300025109|Ga0208553_1004266Not Available4397Open in IMG/M
3300025109|Ga0208553_1132441Not Available557Open in IMG/M
3300025110|Ga0208158_1153607Not Available521Open in IMG/M
3300025118|Ga0208790_1009256Not Available3632Open in IMG/M
3300025120|Ga0209535_1108402Not Available975Open in IMG/M
3300025120|Ga0209535_1154915Not Available716Open in IMG/M
3300025120|Ga0209535_1212407Not Available530Open in IMG/M
3300025122|Ga0209434_1194158Not Available529Open in IMG/M
3300025122|Ga0209434_1201808Not Available515Open in IMG/M
3300025125|Ga0209644_1058818Not Available886Open in IMG/M
3300025125|Ga0209644_1101293Not Available681Open in IMG/M
3300025125|Ga0209644_1128379Not Available604Open in IMG/M
3300025125|Ga0209644_1141857Not Available573Open in IMG/M
3300025125|Ga0209644_1176676Not Available508Open in IMG/M
3300025137|Ga0209336_10169825Not Available561Open in IMG/M
3300025138|Ga0209634_1096486Not Available1318Open in IMG/M
3300025138|Ga0209634_1116449Not Available1149Open in IMG/M
3300025138|Ga0209634_1221433Not Available706Open in IMG/M
3300025257|Ga0207899_1066998All Organisms → Viruses → environmental samples → uncultured virus534Open in IMG/M
3300025259|Ga0207876_1050626All Organisms → Viruses → environmental samples → uncultured virus540Open in IMG/M
3300025266|Ga0208032_1019511Not Available1979Open in IMG/M
3300025652|Ga0208134_1061223Not Available1151Open in IMG/M
3300025873|Ga0209757_10037802Not Available1393Open in IMG/M
3300025873|Ga0209757_10256480Not Available556Open in IMG/M
(restricted) 3300027865|Ga0255052_10475647Not Available613Open in IMG/M
3300031519|Ga0307488_10287807Not Available1065Open in IMG/M
3300031861|Ga0315319_10180952Not Available1058Open in IMG/M
3300032278|Ga0310345_11640591Not Available628Open in IMG/M
3300032278|Ga0310345_12116279Not Available546Open in IMG/M
3300032360|Ga0315334_10788740All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300032820|Ga0310342_101693452Not Available754Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine66.37%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.31%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine4.42%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.54%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.54%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.65%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.65%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.65%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids1.77%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.89%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.89%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.89%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.89%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.89%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine0.89%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.89%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876008Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-3LG-Deep1200EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001717Marine viral communities from the Pacific Ocean - LP-47EnvironmentalOpen in IMG/M
3300001728Marine viral communities from the Pacific Ocean - LP-46EnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006311Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000mEnvironmentalOpen in IMG/M
3300006325Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300017702Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaGEnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300021443Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300021977Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS925 _150kmerEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025043Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025257Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)EnvironmentalOpen in IMG/M
3300025259Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027865 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031861Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_46427012236876008Marine EstuarineMVNTKKTYDYTKRKDGFMGRENRRYWRIDLKTGKRKRITEKE
DelMOSpr2010_1009896643300000116MarineMANTKKYYDYTQRKDCFMGSENRRYWLVNLETGKRKKITEDQYHDKYYHDKY*
JGI24006J15134_1011290623300001450MarineMANTKKFYDYTKRKDCFMGRENRRYWLILKNGKKKRITEKQYHDVLL*
JGI24006J15134_1021518723300001450MarineMANIKKYYDYTKRKDCFMGSENRRYWLVNLKTGKRKRITEDQYHGKH*
JGI24006J15134_1023627923300001450MarineMDSTKKYYDYTKRKDCFMGVENRRYWLVNLKTGKRKRITEDQYHDKH*
JGI24005J15628_1017853623300001589MarineMANTKKIFDYTKRKDGFIGRENRRYWLVNTKTGKRKRITEEQYHDTRY*
JGI24522J20083_101079023300001717MarineMSHTPNTKKIWDYPKRKDCFMGRXNRRYWLVDLKTGKKKRITEKQFHGDWANVS*
JGI24521J20086_100848423300001728MarineMANTRKYYDYTKRKDGFMGQENRRYWLILKNGKKKRITEAQYNDTRI*
JGI24521J20086_101507423300001728MarineMANTKKIWDYPKRKDGFMGRENRRYWLVDLKTGKKKRITEKQFHGDWANVS*
JGI24514J20073_101999923300001731MarineMSHTRNTKKIWDYPKRKDCFMGRENRRYWLVNTKTGKKKRITEKQFHGDWAHVS*
JGI24515J20084_100402323300001743MarineMFQVSVMANTKKIFTYTKNKDDFMGRENRRYWIINLKTGKKKKITEAQFHDPRI*
JGI25131J35506_102504323300002511MarineMANTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYNDTRI*
JGI25131J35506_104958813300002511MarineMLHIRNTKKIWDYPKRKDCFMGRENRRYWLVNTKTGKKKRITEKQFHGDWANVS*
JGI25131J35506_105215113300002511MarineMANTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYHDPRI*
JGI25131J35506_106411723300002511MarineMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHDPRI*
JGI25136J39404_102562623300002760MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSHYKTS*
JGI25136J39404_104592423300002760MarineM*LMENIKKFYDYTKRKDGFMGRENRRYWLVNTNTGKKKRITEKEYEKSS*
JGI25136J39404_104811423300002760MarineMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHDTRI*
JGI25136J39404_107113513300002760MarineMQNTKKIYDYTKRKDCFMGRENRRYWLVNLKTGKKKRITEEQYHGPKH*
JGI25136J39404_109017923300002760MarineMKAITKKIYDYTKRKDEFMGRENRRYWLVNLKTGKKKRITEKAFDA*
Ga0065861_101986923300004448MarineMVNTKKTYDYTKRKDGFMGRENRRYWRIDLKTGKRKRITEKEYHGKH*
Ga0075441_1034124623300006164MarineMSHILNTKKIWDYPKRKDCFMGRENRRYWLVNTKTGKKKRITEKQFHGDWANVS*
Ga0075443_1001920763300006165MarineMKTNKKYYDYTKREDCFMGRENRRYWLVNLKTGKRKKITENQYHDKH*
Ga0068478_119657323300006311MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYSDSPHKTS*
Ga0068478_122753723300006311MarineMIKKFHDYTKNKDDFMGRENRRYWLVNTKTGKKKRITEKQYNDSHYKTS*
Ga0068501_110816123300006325MarineMINKFHDYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYHDTRI*
Ga0068482_151495313300006338MarineMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHD
Ga0068503_1024322143300006340MarineMYHMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHDPRI*
Ga0098033_104054943300006736MarineMANTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYHDTRI*
Ga0098033_119590313300006736MarineMSHTRNTKKIWDYPKRKDGFMGRENRRYWLVDLKTGKKKRITEKQFHGDWAHVS*
Ga0098035_113958113300006738MarineKKIWDYPKRKDCFMGRENRRYWLVNTKTGKKKRITEKQFHGDWANVS*
Ga0098035_118857223300006738MarineMKETKKIWDYPKRKDCFMGRENRRYWLILKNGKKKRITEKQFHGDW
Ga0098058_103575323300006750MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSPHKTS*
Ga0098048_123205023300006752MarineMANTKKIFDYKPNKDGFMGRENRRYWLVNLKTGKRKRITEEQYHDTRY*
Ga0098039_127678713300006753MarineMANTKKIFTYTKNRDDFMGRENRRYWIINLKTGKKKKITEAQFHSRKVA*
Ga0098055_119011023300006793MarineMQNTKKTWDYPKRKDGFMGRENRRYWLVDLKTGKKKRITEKQYAKH*
Ga0070749_1027405823300006802AqueousMANTKKYYDYTKRKDCFMGSENRRYWLVNLETGKRKKITEDQYHEKN*
Ga0070749_1071329813300006802AqueousQKLKILVMVNTKKTYDYTKRKDGFMGRENRRYWRIDLKTGKRKRITEKEYHGKH*
Ga0070746_1010922113300006919AqueousMVNTKKTYDYTKRKDGFMGRENRRYWRIDLKTGKRKRIT
Ga0098053_104245513300006923MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITE
Ga0098053_112504213300006923MarineMANTKKIFDYKPNKDGFMGRENRRYWLVNLKTGKRKRITEEQY
Ga0098050_113876313300006925MarineMANTKKIFDYKPNKDGFMGRENRRYWLVNLKTGKRKRITEEQYQDTRY*
Ga0098057_117226523300006926MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDS
Ga0098036_123697423300006929MarineMANTKKFYDYSKRKDRFMGRENRRYWLILKNGKKKRITEAQYHDTRI*
Ga0098052_126737723300008050MarineMVNTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYHDTRI*
Ga0115371_1136878123300008470SedimentMKTDKKYYDYTKREDCFMGRENRRYWLVNLKTGKRKRITEDQYHDKH*
Ga0114998_1016991423300009422MarineMANIKKYYDYTKRKDCFMGSENRRYWLVNLETGKRKKITEDQYHDKYYHDKH*
Ga0114998_1031711033300009422MarineYYDYTKRKDCFMGVENRRYWLVNLKTGKRKRITEDQYHEKN*
Ga0115004_1020389723300009526MarineMANIKKYYDYTKRKDCFMGSENRRYWLVNLETGKRKKITEDQYHDKYYHDKY*
Ga0105173_101934113300009622Marine OceanicMIKKFFDYTKNKDGFMGQENRRYWLILKNGKKIRITEKQYEKI*
Ga0098056_117748413300010150MarineMIKKFHDYTKNKDNFMGRENRRYWLINTKTGEKKRITEKQYNDSPHKTS*
Ga0098061_132330313300010151MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSRHKTS*
Ga0098047_1039953423300010155MarineMKEITKKIYDYTKRKDEFMGRENRRYWLVNLKTGKKKRITEKEFDA*
Ga0163108_1103451813300012950SeawaterMANTKKIFTYTKNKDDFMGRENRRYWIINLKTGKKKKITEAQFHDPRI*
Ga0181374_103200623300017702MarineMANTKKIFTYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSRHKTS
Ga0181373_101282263300017721MarineAGTQKLKILVMANTKKTYDYTKRKDGFMGRENRRYWCIDLKTGKRKRITEKEYHGKH
Ga0181381_111111723300017726SeawaterMANTKKIFDYTKRKDGFIGRENRRYWLVNTKTGKRKRITEEQYHDTRY
Ga0181386_119931323300017773SeawaterMANTKKIFGYTKRKDGFMGRENRRYWLVDLKTGKKKRITEKQFHGDWAHVS
Ga0181432_123618723300017775SeawaterMRNTKKIWDYPKRKDGFMGRENRRYWLINTKTGKKIRITEKQYYGI
Ga0181432_124572713300017775SeawaterMKAITKKIYDYTKRKDEFMGRENRRYWLVNLKTGKKKRITEKEFDA
Ga0211653_1006209023300020421MarineMANTKKTYDYTKRKDGFMGRENRRYWCIDLKTGKRKRITEKEYHGKH
Ga0206681_1016637723300021443SeawaterMANTKKIFTYTKNKDDFMGRENRRYWIINLKTGKKKKITEAQFHDPRI
Ga0206681_1029754523300021443SeawaterMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDTHYKTS
Ga0226832_1032388523300021791Hydrothermal Vent FluidsMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSPHKTS
Ga0232639_127332513300021977Hydrothermal Vent FluidsMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQL
Ga0212030_105387813300022053AqueousMVNTKKTYDYTKRKDGFMGRENRRYWRIDLKTGKRKRITEKEYHGKH
Ga0196887_108145513300022178AqueousMANTKKYYDYTQRKDCFMGSENRRYWLVNLETGKRKKITEDQYHDKYYHDKH
Ga0207889_100868523300025042MarineMKEITKKIYDYTKRKDEFMGRENRRYWLVNLKTGKKKRITEKEFDA
Ga0207907_11974413300025043MarineMFQVSVMANTKKIFTYTKNKDDFMGRENRRYWIINLKTGKKKKITEAQFHDPRI
Ga0207901_100983513300025045MarineMANTRKYYDYTKRKDGFMGQENRRYWLILKNGKKKRIT
Ga0207901_102989513300025045MarineMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHDTRF
Ga0207901_104261123300025045MarineMANTKKFYDYTQRKDGFMGVENRRYWIINLKTGKKKRITEEQYFNDSYI
Ga0207901_104330223300025045MarineMANTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYHDTRI
Ga0207901_105898623300025045MarineMIKKFHDYTKRKDGFMGRENRRYWLINTKTGKKIRITEKQYYGI
Ga0207902_102061223300025046MarineMIKKFHDYTKRKDGFMGRENRRYWLINTKTGKKIRITGKQYHGI
Ga0207898_103400333300025049MarineMKAITKKIYDYTKRKDEFMGRENRRYWLVNLKTGKKKRITEKAFDA
Ga0207906_100988143300025052MarineMANTRKYYDYTKRKDGFMGQENRRYWLILKNGKKKRITEAQYNDTRI
Ga0208012_106520523300025066MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSRHKTS
Ga0208920_101522253300025072MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQY
Ga0208920_104208543300025072MarineKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSPHKTS
Ga0208156_109679213300025082MarineMSYILNTKKIYDYTKRKDEFMGHENRRYWLVNLKTGKKKRITEKQFHGD
Ga0208013_104747123300025103MarineMANTKKIFDYKPNKDGFMGRENRRYWLVNLKTGKRKRITEEQYHDTRY
Ga0208553_1004266123300025109MarineMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEK
Ga0208553_113244113300025109MarineACYIWKTLMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYNDSRHKTS
Ga0208158_115360723300025110MarineMANTKKIFDYKPNKDGFMGRENRRYWLVNLKTGKRKRITE
Ga0208790_100925683300025118MarineMIKKFHDYTKNKDDFMGHENRRYWLINTKTGEKKRITEKQYNDSRHKTS
Ga0209535_110840213300025120MarineMANTKKYYDYTKRKDCFMGVENRRYWLVNLKTGKRKRITEDQYHEKN
Ga0209535_115491523300025120MarineMFVMVNTRKTYDYTKRKDGFMGRENRRYWLIDLKTGKRKKITEEEYHEKKFSRE
Ga0209535_121240723300025120MarineFDYTKRKDGFMGRENRRYWLVNTKTGKRKRITEEQYHDTRY
Ga0209434_119415813300025122MarineMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHDPRI
Ga0209434_120180813300025122MarineLKIYHMANTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYHDTRI
Ga0209644_105881823300025125MarineMANTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYNDTRI
Ga0209644_110129313300025125MarineMANTKKIFTYTKNKDDFMGRENRRYWLILKNGKKKRITEAQYHDPRI
Ga0209644_112837913300025125MarineMRNTKKIWDYPKRKDGFMGRENRRYWLVNTKTGKKKRITEAQF
Ga0209644_114185713300025125MarineMYHMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHDPRI
Ga0209644_117667613300025125MarineMKEITKKIYDYTKRKDEFMGRENRRYWLVNLKTGKKKRITEKAFNA
Ga0209336_1016982513300025137MarineMDSTKKYYDYTKRKDCFMGVENRRYWLVNLKTGKRKRITEDQYHDKH
Ga0209634_109648623300025138MarineMANTKKYYDYTKRKDCFMGSENRRYWLVNLKTGKRKRITEDQYHGKH
Ga0209634_111644923300025138MarineMANIKKYYDYTKRKDCFMGSENRRYWLVNLETGKRKRITKDQYHGKH
Ga0209634_122143323300025138MarineMANIKKYYDYTKRKDCFMGSENRRYWLVNLKTGKRKRITEDQYHGKH
Ga0207899_106699823300025257Deep OceanMKETKKIWDYPKRKDCFMGRENRRYWLVNTKTGKKKRITEKQFHGDWAYVS
Ga0207876_105062633300025259Deep OceanETKKIWDYPKRKDCFMGRENRRYWLVNTKTGKKKRITEKQFHGDWAYVS
Ga0208032_101951143300025266Deep OceanMKTNKKYYDYTKREDCFMGRENRRYWLVNLKTGKRKKITENQYHDKH
Ga0208134_106122323300025652AqueousMANTKKYYDYTQRKDCFMGSENRRYWLVNLETGKRKKITEDQYHDKYYHDKY
Ga0209757_1003780233300025873MarineMENIKKFYDYTKRKDGFMGRENRRYWLVNTNTGKKKRITEKEYEKSS
Ga0209757_1025648023300025873MarineMSHTPNTKKIYDYTKRKDCFIGRENRRYWLVNTKTGKKKKITEEQYHDPKH
(restricted) Ga0255052_1047564723300027865SeawaterMANTKKIFDYTKRKDGFMGRENRRYWLVNTKTGKRKRITEEQYHDTRY
Ga0307488_1028780713300031519Sackhole BrineMANTKKIFDYTKRKDGFIGRENRRYWLVNTKTGKRKRITEEQYH
Ga0315319_1018095223300031861SeawaterMANTKKIFTYTKNKDDFMGRENRRYWIINLKTGKKKRITEAQFHDPRI
Ga0310345_1164059113300032278SeawaterMIKKFFDYTKNKDDFMGRENRRYWLIDTKTGKKKRITEKEYEKTNHNTSLAS
Ga0310345_1211627923300032278SeawaterMIKKFHDYTKNKDDFMGRENRRYWLINTKTGEKKRITEKQYSDSPHK
Ga0315334_1078874023300032360SeawaterMKKHKKTWDYPKNKYGFMGRENRRYWLILKNGKKKRITEKQFDGIQA
Ga0310342_10169345213300032820SeawaterMANTKKIFTYTKNKDDFMGRENRRYWIVNLKTGKKKRITEAQYHDTRI


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