Metagenome Family F083198

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083198
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	48 residues
Representative Sequence	MKTMLGLEKTEKEILAFEVSDEALEIAAAKEKAGFTLGACTGLSVCDG
Number of Associated Samples	79
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	35.40 %
% of genes from short scaffolds (< 2000 bps)	81.42 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (19.469 % of family members)
Environment Ontology (ENVO)	Unclassified (23.894 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.212 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.42% β-sheet: 0.00% Coil/Unstructured: 81.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00496	SBP_bac_5	7.96
PF13575	DUF4135	2.65
PF04392	ABC_sub_bind	2.65
PF13474	SnoaL_3	1.77
PF01408	GFO_IDH_MocA	0.88
PF13185	GAF_2	0.88
PF00365	PFK	0.88
PF00890	FAD_binding_2	0.88
PF00115	COX1	0.88
PF13396	PLDc_N	0.88
PF12895	ANAPC3	0.88
PF02582	DUF155	0.88
PF13493	DUF4118	0.88
PF13561	adh_short_C2	0.88
PF07015	VirC1	0.88
PF05545	FixQ	0.88
PF02803	Thiolase_C	0.88
PF13531	SBP_bac_11	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.65
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.88
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.88
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.88
COG1723	Mitochondrial translation protein, Rmd1/RMND1/DUF155 family	Translation, ribosomal structure and biogenesis [J]	0.88
COG4736	Cbb3-type cytochrome oxidase, subunit 3	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.12 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.47 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.27 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	5.31 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.85 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.77 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.19 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.77 %
Starkeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.77 %
unclassified Starkeya	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya	0.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.77 %
Starkeya sp. ORNL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp. ORNL1	0.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102I8Q91	Not Available	530	Open in IMG/M
3300000156\|NODE_c0575883	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1416	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10004073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3966	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10004575	All Organisms → cellular organisms → Bacteria	3193	Open in IMG/M
3300004633\|Ga0066395_10783175	Not Available	571	Open in IMG/M
3300005148\|Ga0066819_1000327	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300005205\|Ga0068999_10078281	Not Available	629	Open in IMG/M
3300005213\|Ga0068998_10159625	Not Available	544	Open in IMG/M
3300005329\|Ga0070683_101640565	Not Available	618	Open in IMG/M
3300005332\|Ga0066388_100002094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11918	Open in IMG/M
3300005332\|Ga0066388_100717191	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300005332\|Ga0066388_104129047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp. ORNL1	740	Open in IMG/M
3300005332\|Ga0066388_104332605	Not Available	723	Open in IMG/M
3300005332\|Ga0066388_108789987	Not Available	501	Open in IMG/M
3300005434\|Ga0070709_10315961	All Organisms → cellular organisms → Bacteria → Proteobacteria	1145	Open in IMG/M
3300005435\|Ga0070714_100743208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	948	Open in IMG/M
3300005459\|Ga0068867_100195104	Not Available	1618	Open in IMG/M
3300005764\|Ga0066903_101960717	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005764\|Ga0066903_104996365	Not Available	704	Open in IMG/M
3300005764\|Ga0066903_108176923	Not Available	535	Open in IMG/M
3300005843\|Ga0068860_101803783	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006041\|Ga0075023_100040203	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300006041\|Ga0075023_100052972	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300006041\|Ga0075023_100098873	Not Available	1006	Open in IMG/M
3300006041\|Ga0075023_100272302	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300006047\|Ga0075024_100688008	Not Available	560	Open in IMG/M
3300006050\|Ga0075028_100007475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4365	Open in IMG/M
3300006050\|Ga0075028_100695206	Not Available	612	Open in IMG/M
3300006050\|Ga0075028_100733302	Not Available	597	Open in IMG/M
3300006057\|Ga0075026_100013071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3616	Open in IMG/M
3300006057\|Ga0075026_100051479	Not Available	1942	Open in IMG/M
3300006057\|Ga0075026_100439237	Not Available	741	Open in IMG/M
3300006057\|Ga0075026_100931697	Not Available	536	Open in IMG/M
3300006172\|Ga0075018_10233231	Not Available	885	Open in IMG/M
3300006353\|Ga0075370_10346539	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	887	Open in IMG/M
3300006806\|Ga0079220_10331400	Not Available	957	Open in IMG/M
3300006904\|Ga0075424_101426070	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300009101\|Ga0105247_10797404	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009792\|Ga0126374_10190155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1288	Open in IMG/M
3300009792\|Ga0126374_10778244	Not Available	728	Open in IMG/M
3300010043\|Ga0126380_10002177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7719	Open in IMG/M
3300010358\|Ga0126370_11543876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	633	Open in IMG/M
3300010360\|Ga0126372_10813150	Not Available	927	Open in IMG/M
3300010360\|Ga0126372_11536624	Not Available	703	Open in IMG/M
3300010361\|Ga0126378_11769076	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300010371\|Ga0134125_12340969	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010376\|Ga0126381_102436263	Not Available	750	Open in IMG/M
3300010376\|Ga0126381_104214523	Not Available	558	Open in IMG/M
3300012476\|Ga0157344_1001983	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300012957\|Ga0164303_10860460	Not Available	630	Open in IMG/M
3300012971\|Ga0126369_11529633	Not Available	757	Open in IMG/M
3300012984\|Ga0164309_10918656	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300013307\|Ga0157372_13083773	Not Available	532	Open in IMG/M
3300014056\|Ga0120125_1029621	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300014968\|Ga0157379_11427986	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300015373\|Ga0132257_101724689	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300016387\|Ga0182040_10767031	Not Available	793	Open in IMG/M
3300017939\|Ga0187775_10078223	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1070	Open in IMG/M
3300017939\|Ga0187775_10126036	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300017944\|Ga0187786_10615583	Not Available	512	Open in IMG/M
3300017947\|Ga0187785_10198679	Not Available	872	Open in IMG/M
3300017947\|Ga0187785_10223818	Not Available	830	Open in IMG/M
3300017959\|Ga0187779_10264043	Not Available	1093	Open in IMG/M
3300017959\|Ga0187779_10396816	Not Available	899	Open in IMG/M
3300017966\|Ga0187776_10318933	Not Available	1016	Open in IMG/M
3300017974\|Ga0187777_10005539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7996	Open in IMG/M
3300017974\|Ga0187777_10166058	Not Available	1478	Open in IMG/M
3300018058\|Ga0187766_10243737	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300018060\|Ga0187765_10010902	All Organisms → cellular organisms → Bacteria	4093	Open in IMG/M
3300018064\|Ga0187773_10055621	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300018064\|Ga0187773_10180493	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1110	Open in IMG/M
3300018067\|Ga0184611_1166477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300018072\|Ga0184635_10014384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2823	Open in IMG/M
3300018073\|Ga0184624_10306775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300018089\|Ga0187774_10119769	Not Available	1332	Open in IMG/M
3300019356\|Ga0173481_10494445	Not Available	621	Open in IMG/M
3300021560\|Ga0126371_10008271	All Organisms → cellular organisms → Bacteria → Proteobacteria	9370	Open in IMG/M
3300021560\|Ga0126371_10296989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1741	Open in IMG/M
3300021560\|Ga0126371_10579532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1271	Open in IMG/M
3300024275\|Ga0247674_1044679	Not Available	533	Open in IMG/M
3300025920\|Ga0207649_10411352	Not Available	1014	Open in IMG/M
3300026089\|Ga0207648_10234286	Not Available	1634	Open in IMG/M
3300026340\|Ga0257162_1034884	Not Available	624	Open in IMG/M
3300027894\|Ga0209068_10022056	All Organisms → cellular organisms → Bacteria	3108	Open in IMG/M
3300027894\|Ga0209068_10044218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2247	Open in IMG/M
3300027894\|Ga0209068_10345484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842	Open in IMG/M
3300027894\|Ga0209068_10436810	Not Available	750	Open in IMG/M
3300027910\|Ga0209583_10337436	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300027910\|Ga0209583_10700616	Not Available	528	Open in IMG/M
3300027915\|Ga0209069_10012026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4162	Open in IMG/M
3300027915\|Ga0209069_10178036	Not Available	1073	Open in IMG/M
3300027915\|Ga0209069_10309535	Not Available	841	Open in IMG/M
3300028796\|Ga0307287_10335962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300031545\|Ga0318541_10003894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6071	Open in IMG/M
3300031546\|Ga0318538_10724630	Not Available	539	Open in IMG/M
3300031744\|Ga0306918_10455534	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300031798\|Ga0318523_10569035	Not Available	559	Open in IMG/M
3300031879\|Ga0306919_11162438	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031910\|Ga0306923_10451651	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300031996\|Ga0308176_12726913	Not Available	526	Open in IMG/M
3300032179\|Ga0310889_10001337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6284	Open in IMG/M
3300032179\|Ga0310889_10039840	Not Available	1785	Open in IMG/M
3300032205\|Ga0307472_101122993	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	745	Open in IMG/M
3300032211\|Ga0310896_10931098	Not Available	504	Open in IMG/M
3300032421\|Ga0310812_10270248	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	751	Open in IMG/M
3300032782\|Ga0335082_10398040	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300033289\|Ga0310914_10831719	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300033433\|Ga0326726_10132370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2260	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.38%
Host-Associated	Host-Associated	9.73%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.49%
Aquatic	Environmental → Aquatic	23.89%
Plants	Host-Associated → Plants	9.73%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.60%
Sediment	Environmental → Aquatic → Sediment	22.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%
Marine	Environmental → Aquatic → Marine	1.77%
Peat	Environmental → Terrestrial → Peat	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	22.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.70%
Loam	Environmental → Terrestrial → Soil → Loam	10.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	22.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.89%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	19.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	16.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_08972060	2170459002	Grass Soil	MKTIGLEKTEKEILAFDVSDAALEIAAGTAKKEKAGFTLGSCTGLSVCDG
FG2_06563770	2189573004	Grass Soil	MTNITMGLEETEGDILAFKVSDHVLEIAAGTAKEKANFTLGACTACLSAG
NODE_05758833	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGFSVCDG*
AF_2010_repII_A1DRAFT_100040737	3300000597	Forest Soil	TEMQILGFEVSDEALESAGDSAKKANFTLGACTGLSVCDG*
AF_2010_repII_A001DRAFT_100045752	3300000793	Forest Soil	MKNTTLGLGETEMEILGFEVSDNALESAAGSAKEKANFTLGACTGXXVCDG*
Ga0066395_107831751	3300004633	Tropical Forest Soil	MAMQTKIEQTEEIFAFDVSDEALEIAAGAEKANFTLGACTGLSVCEG*
Ga0066819_10003272	3300005148	Soil	MKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0068999_100782812	3300005205	Natural And Restored Wetlands	MKSITIAPEQTDGEVLAFEVSDAALEIAAASAKEKANFTLGACSGLSVCPG*
Ga0068998_101596251	3300005213	Natural And Restored Wetlands	MKSITVAPEQIDEEVLTFEVSDAALEIAAASAKEKANFTLGACSGLSVCPG*
Ga0070683_1016405652	3300005329	Corn Rhizosphere	MQKAKVMLESAAEEIVLAFEISDEALEMAAGAALDKANFTLGACTGLSVCDG*
Ga0066388_10000209411	3300005332	Tropical Forest Soil	MKNTTLGLGETEMEILGFEVSDNALESAAGSAKEKANFTLGACTGLSVCDG*
Ga0066388_1007171912	3300005332	Tropical Forest Soil	MKNTTLGLGETEIQILGFEVSDEALEGAAGAAKERANFTLGACTGLSVCDG*
Ga0066388_1041290472	3300005332	Tropical Forest Soil	MKKTEIEILAFEVSDDALESAAGTAKEKANFTLGACTGLSVCDG*
Ga0066388_1043326051	3300005332	Tropical Forest Soil	MQTKIEQTEEIFAFDVSDEALEIAAGAEKANFTLGACTGLSVCEG*
Ga0066388_1087899871	3300005332	Tropical Forest Soil	MKTVGFEKTEKEILAFEVSDEVLEIAAGMAKEKAGFTLGSCTGLSVCDG*
Ga0070709_103159611	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQKAIVMLETSEETVLAFEVSDEALEMAAGAAPEKANFTLGACSGLSVCDG*
Ga0070714_1007432083	3300005435	Agricultural Soil	MQKAKVMLEASEETVLAFEVSDEALEMAAGAAPEKANFTLGACSGLSVCDG*
Ga0068867_1001951042	3300005459	Miscanthus Rhizosphere	GAAGERKDRAMKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0066903_1019607172	3300005764	Tropical Forest Soil	MKTVRVEKTEKEILAFEVSDEVLEIAAGMAKEKAGFTLGSCTGLSVCDG*
Ga0066903_1049963651	3300005764	Tropical Forest Soil	MKKTEIEILAFEVSDDALESAAGTVKERANFTLGACTGLSVCDG*
Ga0066903_1081769231	3300005764	Tropical Forest Soil	MKTVRLEKTEKEILAFEVSDEVLEIAAGMAKEKAGFTLGSCTGLSVCDG*
Ga0068860_1018037833	3300005843	Switchgrass Rhizosphere	AAGERKDRAMKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0075023_1000402033	3300006041	Watersheds	MRNITKQTEEETVTFEVTDEALELAAGAAKEKANFTLGACTGLSVCDG*
Ga0075023_1000529722	3300006041	Watersheds	MKTMFKTEEEILAFEVSDEALETAAGMKEKADFTLGACTGLSVCDG*
Ga0075023_1000988733	3300006041	Watersheds	MKNITIGLEQADEDILAFEVSDETLEIAAGSAKEKANFTLGACSGLSVCPG*
Ga0075023_1002723022	3300006041	Watersheds	MKTMLGLENTEKEILAFEVSDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0075024_1006880082	3300006047	Watersheds	VRNIAKQTEEETVTFEVTDEALELAAGAAKETANFTLGACTGLSVCDG*
Ga0075028_1000074755	3300006050	Watersheds	MKNITIGLEQTDEESLAFEVSDEAIELAASSAEEKANFTLGACSGLSVCPG*
Ga0075028_1006952062	3300006050	Watersheds	MRNIAKQTEEENVTFEVTDEALELAAGAAKEKANFTLGACTGLSVCDG*
Ga0075028_1007333022	3300006050	Watersheds	MMNITIGLEQSDEELLAFEVSDAALEIAGGTAKDKANFTLGA
Ga0075026_1000130711	3300006057	Watersheds	MKNITIGLEQTDEDILAFEVSDETLEIAAGSAKEKANFTLGACSGLSVCPG*
Ga0075026_1000514792	3300006057	Watersheds	MKRITIELEQTEEDILAFEISDETLEVAACSAKEKANFTLGACSGLTVCPG*
Ga0075026_1004392372	3300006057	Watersheds	VRNIAKQTEEETVTFEVTDEALELAAGAAKERANFTLGACTGLSVCDG*
Ga0075026_1009316971	3300006057	Watersheds	MKNITIGLEQTDEESLAFEVSDEAIEIAASSAEEKANFTLGACSGLSVCPG*
Ga0075018_102332313	3300006172	Watersheds	MKTMLGLEKTEKEILAFEVSDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0075370_103465391	3300006353	Populus Endosphere	MKTMLIEKTEKEILAFEISDEALEIAAAKEKACFTLGACTGLSVCDG*
Ga0079220_103314001	3300006806	Agricultural Soil	QIEQEILAFEVSDEALETAAGSEKANFTLGACTGLSVCDG*
Ga0075424_1014260703	3300006904	Populus Rhizosphere	MKTMLIEKTEKEILDFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0105247_107974041	3300009101	Switchgrass Rhizosphere	AGERKDRAMKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0126374_101901552	3300009792	Tropical Forest Soil	LGLGETEMEILGFEVSDNALESAAGSAKEKANFTLGACTGLSVCDG*
Ga0126374_107782441	3300009792	Tropical Forest Soil	MKKATLGLGETEIEILGFEVSDAALESAAGTAKENANFTLGACTGLSV
Ga0126380_100021773	3300010043	Tropical Forest Soil	MKKATLGLGETEIEILGFEVSDAALESAAGTAKENANFTLGACTGLSVCGG*
Ga0126370_115438762	3300010358	Tropical Forest Soil	MKNTTLGLGETEIQILGFEVSDEALEGAAGAAKERANFTLG
Ga0126372_108131502	3300010360	Tropical Forest Soil	MKNTTLGLGETEMEILGFEVSDNALESAAGSAKEKA
Ga0126372_115366242	3300010360	Tropical Forest Soil	MKNATLGLGETEKENFGFEVSDEALESAAGTREKANFTLGACTGLSVCGA*
Ga0126378_117690762	3300010361	Tropical Forest Soil	MKTVGLEKTEKEIVAFEVSDEALEIAAGMAKEKAGFTLGAYTGLSVCEG*
Ga0134125_123409692	3300010371	Terrestrial Soil	ENTEKEILAFEVSDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0126381_1024362631	3300010376	Tropical Forest Soil	ETEMQILGFEVSDEALESAGDSAKKANFTLGACTGLSVCDG*
Ga0126381_1042145231	3300010376	Tropical Forest Soil	MKTVRLEKTEKEILAFEVSDEVLEIAAGMAKEKACFTLGSCTGLSVCDG*
Ga0157344_10019832	3300012476	Arabidopsis Rhizosphere	MKTMLIEKTEKEILAFVISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0164303_108604602	3300012957	Soil	GLEKSEREILAFEVSDAALEIAAGNTKEKVNFTLGAWTGLSA*
Ga0126369_115296332	3300012971	Tropical Forest Soil	EIQILGFEVSDEALEGAAGAAKERANFTLGACTGLSVCDG*
Ga0164309_109186562	3300012984	Soil	TEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0157372_130837731	3300013307	Corn Rhizosphere	RAMKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0120125_10296212	3300014056	Permafrost	MKTMIEQIEEEILAYDVSEEALEVAAGGKEKAGSFTLGACTGLSVCPG*
Ga0157379_114279863	3300014968	Switchgrass Rhizosphere	EKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG*
Ga0132257_1017246891	3300015373	Arabidopsis Rhizosphere	MKTVGFEKTEKEILALEVSDEALEIAAGMAKEKAGFPLGSCTGLSVCDG*
Ga0182040_107670311	3300016387	Soil	AMKKTEIEILAFEVSDDALESAAGTVKERANFTLGACTGLSVCDG
Ga0187775_100782232	3300017939	Tropical Peatland	MKNTTTGLAKLEEEILAFEVTDEALEIAASTKEKANFTLGACTGLSVCDG
Ga0187775_101260361	3300017939	Tropical Peatland	NLTIGLERTEEEIFAFEVSDEAIENAAGSAKEKANFTLGACTGLSVCDG
Ga0187786_102946621	3300017944	Tropical Peatland	MKNTTTGLAKLEEEIVGFEVTDEALEIAASTKEKANFTLGA
Ga0187786_106155832	3300017944	Tropical Peatland	MKNLTIGLERTEEEIFAFEVSDEAIENAAGSAKEKANFTLGACTG
Ga0187785_101986791	3300017947	Tropical Peatland	MKTVGFEKTEKEILAFEVSDEVLEIAAGMAKEKAGFTLGSCTGLSVCDG
Ga0187785_102238183	3300017947	Tropical Peatland	MKNLTIGLERTEEEIFAFEVSDEAIENAAGSAKEKANFTLGAC
Ga0187779_102640433	3300017959	Tropical Peatland	MKNTTTGLDQTDDVFAFEVSDEALESAAGTAKEKANFTLGACTG
Ga0187779_103968162	3300017959	Tropical Peatland	MKYQIEQEVTEILAFEVSDEALEIAAGSEKANFTLGACTGLSVCDG
Ga0187776_103189331	3300017966	Tropical Peatland	MKNLTIGLERTEEEIFAFEVSDEAIENAAGSAKEKANFTLGACTGLSVCDG
Ga0187777_100055394	3300017974	Tropical Peatland	MKNTTTGLDQTDDVFAFEVSDEALESAAGTAKEKANFTLGACTGLSVCDG
Ga0187777_101660581	3300017974	Tropical Peatland	MKTVGLEKTEKEILAFEVSDEVLEIAAGMAKEKAGFTLGSCTGLSVCDG
Ga0187787_101823881	3300018029	Tropical Peatland	MKNTTMGLAKLEEEVLAFEVTDEALEIAAGVKEKANFTLGACTGLSVCDG
Ga0187766_102437372	3300018058	Tropical Peatland	MKTVGIEKTEKEILAFEVSDEVLEIAAGMAKEKAGFTLGSCTGLSVCDG
Ga0187765_100109022	3300018060	Tropical Peatland	MKYQIEQEITEILAFEVSDEALEIAAGSEKANFTLGACTGLSVCDG
Ga0187773_100556212	3300018064	Tropical Peatland	MNDTKGLEQVEQDILAFEIADEALEIAGGKEKAGSFTLGACTGLSVCDG
Ga0187773_101804932	3300018064	Tropical Peatland	MKNTTTGLAKLEEEILVFEVTDEALEIAASTKEKANFTLGACTGLSVCDG
Ga0187773_107674821	3300018064	Tropical Peatland	MKTTTMGLAKLEEEILAFEVTDEALEIAAGAKEKANFTLGACTGLSVCDG
Ga0184611_11664772	3300018067	Groundwater Sediment	PVNKGWMKVMRNIANQIKEETLAFEVTDEALELAAGVAKEKASFTLGACTGLSVCDG
Ga0184635_100143842	3300018072	Groundwater Sediment	MRNIANQIKEETLAFEVTDEALELAAGVAKEKASFTLGACTGLSVCDG
Ga0184624_103067751	3300018073	Groundwater Sediment	KEETLAFEVTDEALELAAGVAKEKASFTLGACTGLSVCDG
Ga0187774_101197691	3300018089	Tropical Peatland	RTNAMNDTMGLEQLEQDILAFDVADEALEIAGGKEKAGSFTLGACTGLSVCDG
Ga0187774_106228462	3300018089	Tropical Peatland	MKNITIGLEHTEEELILAFEASDETLEIAAGSAKEKANFTLGACTGLVECPA
Ga0173481_104944452	3300019356	Soil	MKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0126371_100082715	3300021560	Tropical Forest Soil	MKKATLGLGETEIEILGFEVSDAALESAAGTAKENANFTLGACTGLSVCGG
Ga0126371_102969892	3300021560	Tropical Forest Soil	MKNTTLGLGETEMEILGFEVSDNALESAAGSAKEKANFTLGACTGLSVCDG
Ga0126371_105795322	3300021560	Tropical Forest Soil	MQTKIEQTEEIFAFDVSDEALEIAAGAEKANFTLGACTGLSVCEG
Ga0247674_10446791	3300024275	Soil	MKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLS
Ga0207649_104113523	3300025920	Corn Rhizosphere	TEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0207648_102342862	3300026089	Miscanthus Rhizosphere	KTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0257162_10348841	3300026340	Soil	MKTIGLEKTEKEILAFEVSDETLEIAAGRAKEKAGFTLGSCTGLSVCDG
Ga0209068_100220561	3300027894	Watersheds	MKTMFKTEEEILAFEVSDEALETAAGMKEKADFTLGACTGLSVCDG
Ga0209068_100442183	3300027894	Watersheds	MRNITKQTEEETVTFEVTDEALELAAGAAKEKANFTLGACTGLSVCDG
Ga0209068_103454841	3300027894	Watersheds	MKNITIGLEQTDEESLAFEVSDEAIELAASSAEEKANFTLGACSGLS
Ga0209068_104368101	3300027894	Watersheds	MKNITIGLEQADEDILAFEVSDETLEIAAGSAKEKANFTLGACSGLSVCPG
Ga0209583_103374361	3300027910	Watersheds	MKTMLGLENTEKEILAFEVSDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0209583_107006161	3300027910	Watersheds	VRNIAKQTEEETVTFEVTDEALELAAGAAKERANFTLGACTGLSVCDG
Ga0209069_100120262	3300027915	Watersheds	VRNIAKQTEEETVTFEVTDEALELAAGAAKETANFTLGACTGLSVCDG
Ga0209069_101780362	3300027915	Watersheds	MRNITKQTEEETVTFEVTDEALELAAGAAKEKANFTLGACTGLS
Ga0209069_103095351	3300027915	Watersheds	MKRITIGLEQTEEDILAFEISDETLEVAACSAKEKANFTLGACSGLTVCPG
Ga0307287_103359621	3300028796	Soil	RNWGPVNKGWMKVMRNIANQIKEETLAFEVTDEALELAAGVAKEKASFTLGACTGLSVCD
Ga0318541_100038942	3300031545	Soil	MKTMLGLEKTEKEILAFEVSDDSLEIAAGMAKEKAGFTLGACTGLSVCEG
Ga0318538_107246302	3300031546	Soil	MKTVRLEKTEKEILAFEVSDEVVEIAAGMAKEKAGFTLGSCTGLSVCDG
Ga0306918_104555341	3300031744	Soil	MKKTEIEILAFEVSDDALESAAGTVKERANFTLGACTGLSVCDG
Ga0318523_105690351	3300031798	Soil	MKTMLGLEKTEKEILAFEVSDEVVEIAAGMAKEKAGFTLGSCTGLSVCDG
Ga0306919_111624381	3300031879	Soil	MKTVRLEKTEKEILAFEVSDEVVEIAAGMAKEKAGFTLGSCTGLS
Ga0306923_104516511	3300031910	Soil	MKTVRLEKTEKEILAFEVSDEVVEIAAGMAKEKAGFTLGSC
Ga0308176_127269131	3300031996	Soil	MKNASVMLEKAEEAVLAFEVSDEALEMAAGGALEKANFTLGACSGLSVCDG
Ga0310889_100013376	3300032179	Soil	MKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSV
Ga0310889_100398402	3300032179	Soil	RKDRAMNTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0307472_1011229932	3300032205	Hardwood Forest Soil	RKDRAMKTMLIEKTEKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0310896_109310982	3300032211	Soil	EKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0310812_102702481	3300032421	Soil	GAAGERKDRAMKTMLIEKTVKEILAFEISDEALEIAAAKEKAGFTLGACTGLSVCDG
Ga0335082_103980402	3300032782	Soil	MKMNELEQDLLAFEVSDEVLEIAAGTKEKAASFTLGACTGLSVCDG
Ga0310914_108317193	3300033289	Soil	TEKEILAFEVSDEVVEIAAGMAKEKAGFTLGSCTGLSVCDG
Ga0326726_101323702	3300033433	Peat Soil	MKSITIAPEQTDGEVLAFEVSDAALEIAAASAKEKANFTLGACSGLSVCPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083198

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences