Metagenome Family F083164

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083164
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	72 residues
Representative Sequence	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.83 %
% of genes near scaffold ends (potentially truncated)	23.01 %
% of genes from short scaffolds (< 2000 bps)	75.22 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.531 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.699 % of family members)
Environment Ontology (ENVO)	Unclassified (19.469 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.32% β-sheet: 0.00% Coil/Unstructured: 50.68%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00589	Phage_integrase	10.62
PF14659	Phage_int_SAM_3	2.65
PF13481	AAA_25	1.77
PF12728	HTH_17	1.77
PF12161	HsdM_N	1.77
PF06739	SBBP	1.77
PF08706	D5_N	0.88
PF12307	DUF3631	0.88
PF13429	TPR_15	0.88
PF02899	Phage_int_SAM_1	0.88
PF00990	GGDEF	0.88
PF00440	TetR_N	0.88
PF08352	oligo_HPY	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.88
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.42 %
Unclassified	root	N/A	18.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.53 %
Unclassified	root	N/A	18.58 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.53 %
Unclassified	root	N/A	18.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.18 %
Unclassified	root	N/A	18.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.10 %
Unclassified	root	N/A	18.58 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.10 %
Unclassified	root	N/A	18.58 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.10 %
Unclassified	root	N/A	18.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.54 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.10 %
Unclassified	root	N/A	18.58 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.77 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.10 %
Unclassified	root	N/A	18.58 %
Mesorhizobium ciceri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium ciceri	0.88 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10030557	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300003218\|JGI26339J46600_10017488	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300004091\|Ga0062387_101032816	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300004633\|Ga0066395_10897387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium ciceri	536	Open in IMG/M
3300005166\|Ga0066674_10246348	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005171\|Ga0066677_10122676	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300005172\|Ga0066683_10062710	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300005187\|Ga0066675_10440070	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005434\|Ga0070709_10617769	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300005435\|Ga0070714_100752429	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005437\|Ga0070710_10713678	Not Available	709	Open in IMG/M
3300005439\|Ga0070711_100741294	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005451\|Ga0066681_10273081	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005518\|Ga0070699_101580613	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005542\|Ga0070732_10009725	All Organisms → cellular organisms → Bacteria → Acidobacteria	5264	Open in IMG/M
3300005542\|Ga0070732_10780200	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005558\|Ga0066698_10535822	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005575\|Ga0066702_10551849	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005598\|Ga0066706_10740278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	780	Open in IMG/M
3300005764\|Ga0066903_103096598	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005921\|Ga0070766_10196161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1260	Open in IMG/M
3300006050\|Ga0075028_100626970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300006059\|Ga0075017_100672527	Not Available	795	Open in IMG/M
3300006173\|Ga0070716_100228569	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300006893\|Ga0073928_10445242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300007982\|Ga0102924_1002572	All Organisms → cellular organisms → Bacteria	19672	Open in IMG/M
3300007982\|Ga0102924_1346839	Not Available	575	Open in IMG/M
3300009012\|Ga0066710_100582193	All Organisms → cellular organisms → Bacteria → Acidobacteria	1696	Open in IMG/M
3300009088\|Ga0099830_10278142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1331	Open in IMG/M
3300009089\|Ga0099828_10696838	Not Available	912	Open in IMG/M
3300009090\|Ga0099827_11419115	Not Available	604	Open in IMG/M
3300009090\|Ga0099827_11656632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300009137\|Ga0066709_100251446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2367	Open in IMG/M
3300009137\|Ga0066709_104545449	Not Available	507	Open in IMG/M
3300009545\|Ga0105237_12311555	Not Available	547	Open in IMG/M
3300009623\|Ga0116133_1000953	All Organisms → cellular organisms → Bacteria → Acidobacteria	8707	Open in IMG/M
3300009624\|Ga0116105_1018027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1471	Open in IMG/M
3300009665\|Ga0116135_1377715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300009839\|Ga0116223_10639685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300010046\|Ga0126384_11442476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010336\|Ga0134071_10102989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1357	Open in IMG/M
3300010337\|Ga0134062_10157791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300010376\|Ga0126381_100012282	All Organisms → cellular organisms → Bacteria	9724	Open in IMG/M
3300012189\|Ga0137388_11328807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300012202\|Ga0137363_11796901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012204\|Ga0137374_10000995	All Organisms → cellular organisms → Bacteria	31433	Open in IMG/M
3300012205\|Ga0137362_11036783	Not Available	698	Open in IMG/M
3300012350\|Ga0137372_10490537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300012354\|Ga0137366_10002429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14276	Open in IMG/M
3300012359\|Ga0137385_11549805	Not Available	527	Open in IMG/M
3300012683\|Ga0137398_10774909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012685\|Ga0137397_10349547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300012922\|Ga0137394_10983201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300012923\|Ga0137359_10556358	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300012927\|Ga0137416_12201849	Not Available	507	Open in IMG/M
3300012930\|Ga0137407_10099165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2493	Open in IMG/M
3300013296\|Ga0157374_11309355	Not Available	747	Open in IMG/M
3300014168\|Ga0181534_10043864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2205	Open in IMG/M
3300014200\|Ga0181526_10235221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300014201\|Ga0181537_10811350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300014501\|Ga0182024_10052219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6454	Open in IMG/M
3300014501\|Ga0182024_10086672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4635	Open in IMG/M
3300014501\|Ga0182024_10446218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1660	Open in IMG/M
3300014501\|Ga0182024_10477371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1591	Open in IMG/M
3300014638\|Ga0181536_10020044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5464	Open in IMG/M
3300017822\|Ga0187802_10077037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300017822\|Ga0187802_10251557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300017943\|Ga0187819_10005042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7239	Open in IMG/M
3300017946\|Ga0187879_10499246	Not Available	675	Open in IMG/M
3300017948\|Ga0187847_10002146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16369	Open in IMG/M
3300017955\|Ga0187817_11110227	Not Available	508	Open in IMG/M
3300017995\|Ga0187816_10065058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1539	Open in IMG/M
3300018006\|Ga0187804_10530639	Not Available	531	Open in IMG/M
3300018017\|Ga0187872_10225825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300018047\|Ga0187859_10015520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4280	Open in IMG/M
3300018431\|Ga0066655_10121947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300018433\|Ga0066667_11395749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300018468\|Ga0066662_11527378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300021180\|Ga0210396_10020801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6079	Open in IMG/M
3300021478\|Ga0210402_10182963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1921	Open in IMG/M
3300021559\|Ga0210409_10063556	Not Available	3445	Open in IMG/M
3300022521\|Ga0224541_1000759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3063	Open in IMG/M
3300022557\|Ga0212123_10605102	Not Available	691	Open in IMG/M
3300022881\|Ga0224545_1001599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4491	Open in IMG/M
3300025412\|Ga0208194_1020182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300025898\|Ga0207692_11150963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300025905\|Ga0207685_10543653	Not Available	617	Open in IMG/M
3300025912\|Ga0207707_11020565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300025944\|Ga0207661_10548448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300026320\|Ga0209131_1027042	All Organisms → cellular organisms → Bacteria → Acidobacteria	3391	Open in IMG/M
3300026536\|Ga0209058_1045733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2539	Open in IMG/M
3300026548\|Ga0209161_10420450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300027109\|Ga0208603_1003719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2542	Open in IMG/M
3300027795\|Ga0209139_10246027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300027825\|Ga0209039_10087458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1352	Open in IMG/M
3300027842\|Ga0209580_10005380	All Organisms → cellular organisms → Bacteria	5444	Open in IMG/M
3300027842\|Ga0209580_10202875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300027854\|Ga0209517_10058472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2835	Open in IMG/M
3300027862\|Ga0209701_10278362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300027903\|Ga0209488_10702784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300028536\|Ga0137415_11465720	Not Available	507	Open in IMG/M
3300029943\|Ga0311340_10303993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1518	Open in IMG/M
3300030007\|Ga0311338_10715144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300030054\|Ga0302182_10432734	Not Available	549	Open in IMG/M
3300030399\|Ga0311353_10377040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300031231\|Ga0170824_107449509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300031837\|Ga0302315_10444045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300031912\|Ga0306921_11750718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300031962\|Ga0307479_10015458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7161	Open in IMG/M
3300032160\|Ga0311301_11383390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300032174\|Ga0307470_11291200	Not Available	597	Open in IMG/M
3300034163\|Ga0370515_0006710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5568	Open in IMG/M
3300034163\|Ga0370515_0295350	Not Available	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.23%
Host-Associated	Host-Associated	1.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.45%
Aquatic	Environmental → Aquatic	24.78%
Plants	Host-Associated → Plants	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.26%
Freshwater	Environmental → Aquatic → Freshwater	19.47%
Peat	Environmental → Terrestrial → Peat	6.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.54%
Sediment	Environmental → Aquatic → Sediment	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.47%
Loam	Environmental → Terrestrial → Soil → Loam	13.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.19%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.54%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_100305572	3300002907	Grasslands Soil	MPTEWLLWRAPLLGKIGGAARSKKLSPAQRSEIAQKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP*
JGI26339J46600_100174882	3300003218	Bog Forest Soil	MKARKLNPHASALGKLGAAARLKKLSPAERSDIARKAGLARNQKLSAEERKRIAALGGKASAGILKGKRKEQL*
Ga0062387_1010328161	3300004091	Bog Forest Soil	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPDERKRIAGLGGKASAGIPKTKRKEQP*
Ga0066395_108973871	3300004633	Tropical Forest Soil	MKARKPNPHASALGKLGAAARFKKLSPAERSEIARKAGLARNQKLSAEERKRIAALGGKASAGIPKSKRKGQP*
Ga0066674_102463482	3300005166	Soil	MKRKVPNPHASALGKLGGAARSKKLSPAERSEIARKAGLARTQRLSPEERKRIAAMGGKASAGTPKTKRKEQP*
Ga0066677_101226762	3300005171	Soil	ASALGKLGGAARSKKLSPSERSQIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTMRKEQP*
Ga0066683_100627102	3300005172	Soil	MMAKKPNPHARALGKLGGLARTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGTPKDKRRRET*
Ga0066675_104400701	3300005187	Soil	MMAKKPNPHARALGKLGGLARTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGTPKDKRRRE
Ga0070709_106177692	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKGKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSLKLSPEERKRIAALGGKASAGIPKTKRKEQP*
Ga0070714_1007524292	3300005435	Agricultural Soil	MTVKKPNPHASALGKLGGKARLKNLTAAERSEIARKAGLARNEKLSAEERQRIAALGGKASAGIPKSKRKEKP*
Ga0070710_107136782	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKGKVPNPHASALGKLGGAARSKKLSPAQRSEIARMAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP*
Ga0070711_1007412942	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTVKKPNPHASALGRLGGKARSKNLTAAERSEIARKAGLARNEKLSAEERQRIAALGGKASAGIPKSKRKEKP*
Ga0066681_102730812	3300005451	Soil	MMAKKPNPHARALGKLGGLARTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGRPKD*
Ga0070699_1015806132	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKRKVPNPHASALGKLGGAARSKKLSPSERSQIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTTRKEQP*
Ga0070732_100097252	3300005542	Surface Soil	MKQKVPNPHASALGKLGGAARSKKLSPAERSELARKAGLARSQKLSPAERRRIAALGGKASAGIPKSKRKEQP*
Ga0070732_107802002	3300005542	Surface Soil	MKRKVPNPHASALGKLGGAARSKKLSPAERSEIARKAGLARSRKLSPEERSRIAALGGKASAGTPKKRKEQP*
Ga0066698_105358222	3300005558	Soil	MMAKKPNPHARALGKLGGLSRTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGTPKDKRRRET*
Ga0066702_105518492	3300005575	Soil	MKHKNPHARALGKLGGKARTEKLSPERRSEIARRAGLARSKKLSADERKRIAALGGKASAGKPKTKRKETV*
Ga0066706_107402782	3300005598	Soil	MKAKKPNPHASALGKLGGVARSKKLSPTQRTEIAQRAGLARSQKLTAEERRRIAALGGRASAGTPKGKRKEQK*
Ga0066903_1030965982	3300005764	Tropical Forest Soil	MKARKPNPHASALGKLGAAARFKKLSPAERSEIARKAGLARNQKLSAEERKRIAALGGKASAGIPKSKRKEQP*
Ga0070766_101961612	3300005921	Soil	MKRKVPNRHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP*
Ga0075028_1006269701	3300006050	Watersheds	VKRRIPNPHASALGKLGGVARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP*
Ga0075017_1006725272	3300006059	Watersheds	MKRKVPNPHASALGKLGGAARSKKLSPAERSEIARKAGLARSQKLSPEERKRIAALGGQASAGVPKTKRKEQP*
Ga0070716_1002285693	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKSKRPNPHARALGKLGGKARTQKLSPQQRSEIARKAGLARTQKLSADERKRISALGGKASAGKPKTKRKETM*
Ga0073928_104452423	3300006893	Iron-Sulfur Acid Spring	MTRRIPNPHASALGKLGGAARSKKLTPAQRTEIARKAGLARSQKLSPAERKRIAALGGKASAGIPKTKRKEQP*
Ga0102924_10025728	3300007982	Iron-Sulfur Acid Spring	VKKRIPNPHASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP*
Ga0102924_13468392	3300007982	Iron-Sulfur Acid Spring	MKCKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSHKLSTDDRKRIAALGGKASAGIPKTKRKEQL*
Ga0066710_1005821931	3300009012	Grasslands Soil	MKQSKNPHARALGKLGGKARTEKLSPERRSEIARKAGLARNQKLSADERKRIAALGGKASAGKPKTKREETL
Ga0099830_102781421	3300009088	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSRKLSPEERKRIAALGGKASAGIPKTKRKEQL*
Ga0099828_106968382	3300009089	Vadose Zone Soil	KRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSRKLSPEERKRIAALGGKASAGIPKTKRKEQL*
Ga0099827_114191151	3300009090	Vadose Zone Soil	MKGKVPNPHASALGKLGGAARSKKLSPAQRCEIARNAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP*
Ga0099827_116566322	3300009090	Vadose Zone Soil	MISKKPNPHAKALGKLGGLARSKKLLPAQRSEIARKAGIARWANLSAKERSQIAALGGKASKGVPKSKRRKE
Ga0066709_1002514462	3300009137	Grasslands Soil	MKQSKNPHARALGKLGGKARTEKLSPERRSEIARKAGLARNQKLSADERKRIAALGGKASAGKPKTKREETL*
Ga0066709_1045454491	3300009137	Grasslands Soil	MKRKVPNPHASALGKLGGAARSKKLSPSERSQIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTMRKEQP*
Ga0105237_123115551	3300009545	Corn Rhizosphere	MKYKNPHARALGKLGGKARTEKLSPERRSEIARKAGLARSQKLSADERRRIAALGGKASAGKPKTKRKETV*
Ga0116133_10009538	3300009623	Peatland	ASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP*
Ga0116105_10180272	3300009624	Peatland	PHASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP*
Ga0116135_13777151	3300009665	Peatland	MKKRTPNPHASALGKLGGAARSKKFSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTRRKE
Ga0116223_106396851	3300009839	Peatlands Soil	MKNKNPHARALGKLGGKARTEKLSPERRSEIARKAGLARSRKLSADERKRIAALGGKASVGKPKTKRKETV*
Ga0126384_114424761	3300010046	Tropical Forest Soil	MKRRVPNPHASALGKLGGVARSKKLSPDERSEIARKAGLARSQKLSPENRKRIAALGGKASAGT
Ga0134071_101029891	3300010336	Grasslands Soil	MMAKKPNPHARALGKLGGLARTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGRPKNKKP
Ga0134062_101577911	3300010337	Grasslands Soil	MMAKKPNPHARALGKLGGLSRTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGRPKDKRRRET*
Ga0126381_10001228211	3300010376	Tropical Forest Soil	MKKKVPNPHASALGKLGGAARSKKLSPAERSEIARKAGLARSQKLSSEERKRIAALGGKASAGTPKTKRKEQP*
Ga0137388_113288071	3300012189	Vadose Zone Soil	MKNKNPHARALGKLGGKARTEKLSPERRSEIARKAGLARSQKLSADERKRIAALGGKASAGKPK
Ga0137363_117969011	3300012202	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSTEERKRIAAMGGKASVGTPKKKRKEQP*
Ga0137374_1000099535	3300012204	Vadose Zone Soil	MKQKVPNPHASALGKLGGAARSKKLSPAERSEIARKAGLARSRKLSPEERSRIAALGGKASAGTPKKRKEQP*
Ga0137362_110367831	3300012205	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLSPVQRSEIARKAGLARSQKLSSDERKRIAALGGKASAGIPKTKRKEQP*
Ga0137372_104905372	3300012350	Vadose Zone Soil	MKRRVPNPHASALGKLGGAARSKKLSPAERSEIARKAGLARTQKLSPEERKRIAAMGGKASAGIPKTKRKEQP*
Ga0137366_1000242913	3300012354	Vadose Zone Soil	MKHKNPHARALGKLGGKARTEKLSPERRSEIARGAGLARSKKLSADERKRIAALGGKASAGKPKAKRKETV*
Ga0137385_115498051	3300012359	Vadose Zone Soil	MPMKGKVPNPHASALGKLGGAARSKKWSPAQRSEIARNAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP*
Ga0137398_107749091	3300012683	Vadose Zone Soil	PNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP*
Ga0137397_103495471	3300012685	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLTPAQRTEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTMRKEQP*
Ga0137394_109832012	3300012922	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLSPSERSQIARKAGLARSQKLSSEERKRIAALGGKASAGIPKTMRKERP*
Ga0137359_105563582	3300012923	Vadose Zone Soil	MKRRVPNPHASALGKLGGAARSKKLSPAERSEIASKAGVARSQKLSPEARKRIAAMGGRASAGTPKTKRKEQR*
Ga0137416_122018492	3300012927	Vadose Zone Soil	ASALGKLGGAARSKKLSPAERSEIARKAGLARSQKLSPEERKRIAALGGKASAGTPKTKRKEQP*
Ga0137407_100991652	3300012930	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLSPAERSEIARRAGLARSQKLSPDERKRIAALGGKASAGIPKTKRKEQL*
Ga0157374_113093552	3300013296	Miscanthus Rhizosphere	MPMRGKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSLKLSPEERKRIAALGGKASAGISKNKRKEQP*
Ga0181534_100438643	3300014168	Bog	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPDERKRIAALGGKASAGIPKTKRKEQP*
Ga0181526_102352212	3300014200	Bog	ALGKLGGVARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGKASAGVPKTKRKEQP*
Ga0181537_108113502	3300014201	Bog	MKKKVPNPHASALGKLGGAARSKKLSPAERTEIAQKAGIARSLKLSPEERKRIAALGGRASRGIPKTKERNDQ*
Ga0182024_100522197	3300014501	Permafrost	MKRRIPNPHASALGKLGGAARSKKLTPAQRTEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP*
Ga0182024_100866725	3300014501	Permafrost	VKKRIPNPHASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLGPEERKRIAGLGGKASAGIPKTKRKEQP*
Ga0182024_104462182	3300014501	Permafrost	MKKIPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARNQKLSSEERKRIAGLGGKASAGIPKTKRKEQP*
Ga0182024_104773713	3300014501	Permafrost	MKKKIPNPHASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPNSPWQNC*
Ga0181536_100200442	3300014638	Bog	MKHKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGRASAGIPKTKRKEQT*
Ga0187802_100770372	3300017822	Freshwater Sediment	MKRRIPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Ga0187802_102515571	3300017822	Freshwater Sediment	MKNKNPHARALGKLGGKARTEKLSPERRSEIARKAGLARSQKLSADERQRIAALGGKASAGKPKTKRKETV
Ga0187819_100050422	3300017943	Freshwater Sediment	MKHKKLNPHARALGKLGGKARTEKLSPERRSEIARIAGLARSQKLSADERKRISALGGKASAGKPKTKRKETV
Ga0187879_104992461	3300017946	Peatland	MKRKVPNPHASALGKLGGVARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGKASAGVPKTKRKEQP
Ga0187847_100021463	3300017948	Peatland	VKKRIPNPHASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP
Ga0187817_111102271	3300017955	Freshwater Sediment	RIPNPHASALGKLGGAARSKKLSPAQRSQIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Ga0187816_100650583	3300017995	Freshwater Sediment	MKRRIPNPHASALGKLGGAARSKKLSPAQRSQIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Ga0187804_105306392	3300018006	Freshwater Sediment	ARALGKLGGKARTDKLSPERRSEIARKAGLARSQKLSADERKRISALGGKASAGKPKTKRKETV
Ga0187872_102258252	3300018017	Peatland	VKKRIPNPHASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERERIAGLGGKASAGIPKTKRKEQP
Ga0187859_100155202	3300018047	Peatland	MKKRTPNPHASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTRRKEQS
Ga0066655_101219472	3300018431	Grasslands Soil	MMAKKPNPHARALGKLGGLARTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGTPKDKRRRET
Ga0066667_113957491	3300018433	Grasslands Soil	MKHKNPHARALGKLGGKARTEKLSPERRSEIARRAGLARSKKLSADERKRIAALGGKASAGKPKTKRKETL
Ga0066662_115273782	3300018468	Grasslands Soil	VKRKVLNPHASALGKLGGAARSKKLSPAERSEIARKAGLARSQKLSPEERKRIAALGGKASAGTPKTK
Ga0210396_100208016	3300021180	Soil	MKRRIPNPHASALGKLGGAARSKKLTPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP
Ga0210402_101829632	3300021478	Soil	MKNKNPHARALGKLGGKARTEKLSPERRSEIARIAGLARSQKLGANERKRIAALGGKASAGKPKTKRKEKQ
Ga0210409_100635562	3300021559	Soil	VKRKVPNPHASALGKLGGAARSKKLSPAQRSQIARKAGLARSQKLSPEERKRIAALGGKASAGIAKTKRKEQP
Ga0224541_10007595	3300022521	Soil	MKRRIPNPHASALGKLGGAARSKKLTPAQRTEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Ga0212123_106051021	3300022557	Iron-Sulfur Acid Spring	MKCKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSHKLSTDDRKRIAALGGKASAGIPKTKRKEQL
Ga0224545_10015996	3300022881	Soil	MKKRILNPHASALGKLGGAARSKKLSPAQRSEIARKAGIARSQKLSPGERKRIAGLGGKASAGIAKTKRKEQP
Ga0208194_10201822	3300025412	Peatland	ASALGKLGGAARSKKLSPAQRTEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP
Ga0207692_111509631	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTVKKPNPHASALGKLGGKARLKNLTAAERSEIARKAGLARNEKLSAEERQRIAALGGKASAGIPKSK
Ga0207685_105436532	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARMAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Ga0207707_110205651	3300025912	Corn Rhizosphere	MTVKKPNPHASALGRLGGKARSKNLTAAERSEIARKAGLARNEKLSAEERQRIAALGGKASAGVPKSKRKEKP
Ga0207661_105484482	3300025944	Corn Rhizosphere	QDRVSGMTVKKPNPHASALGRLGGKARSKNLTAAERSEIARKAGLARNEKLSAEERQRIAALGGKASAGVPKSKRKEKP
Ga0209131_10270422	3300026320	Grasslands Soil	MPTEWLLWRAPLLGKIGGAARSKKLSPAQRSEIAQKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP
Ga0209058_10457334	3300026536	Soil	MMAKKPNPHARALGKLGGLSRTKKLTSAQRSEIARKAGIARWENLNAKERSRIAALGGKASKGTPKDKRRRET
Ga0209161_104204501	3300026548	Soil	MKAKKPNPHASALGKLGGVARSKKLSPTQRTEIAQRAGLARSQKLTAEERRRIAALGGRASAGTPKGKRKEQK
Ga0208603_10037191	3300027109	Forest Soil	MKRRIPNPHASALGKLGGAARSKKLTPAQRTEIARKAGLARSQKLSPAERKRIAALGGKASAGIPKTKRKEQP
Ga0209139_102460271	3300027795	Bog Forest Soil	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPDERKRIAGLGGKASAGIPKTKRKEQP
Ga0209039_100874582	3300027825	Bog Forest Soil	MKARKLNPHASALGKLGAAARLKKLSPAERSDIARKAGLARNQKLSAEERKRIAALGGKASAGILKGKRKEQL
Ga0209580_100053802	3300027842	Surface Soil	MKQKVPNPHASALGKLGGAARSKKLSPAERSELARKAGLARSQKLSPAERRRIAALGGKASAGIPKSKRKEQP
Ga0209580_102028752	3300027842	Surface Soil	MTVKKPNPHASALGKLGGKARSKSLTAAERSEIARKAGLARNEKLSAEERQRIAALGGKASAGIPKSKRKEKP
Ga0209517_100584727	3300027854	Peatlands Soil	MKNKNPHARALGKLGGKARTEKLSPERRSEIARKAGLARSRKLSADERKRIAALGGKASVGKPKTKRKETV
Ga0209701_102783622	3300027862	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSRKLSPEERKRIAALGGKASAGIPKTKRKEQL
Ga0209488_107027841	3300027903	Vadose Zone Soil	MKRKVPNPHASALGKLGGAARSKKLTPAQRSEIARKAGLARSQKLSPEERKRIAGLGGKASAGIPKTKRKEQP
Ga0137415_114657201	3300028536	Vadose Zone Soil	ASALGKLGGAARSKKLSPAERSEIARKAGLARSQKLSPEERKRIAALGGKASAGTPKTKRKEQP
Ga0311340_103039933	3300029943	Palsa	MKRKVPNPHASALGKLGGAARSKKLTPAQRSEIARTAGLARSQKLSPDERKRIAGLGGKASARIPKTKRKEQP
Ga0311338_107151442	3300030007	Palsa	MKRKVLNPHASALGKLGGAARSKKLTPAQRSEIARKAGLARSQKLSPDERKRIAGLGGKASAGIPKTKRKEQP
Ga0302182_104327342	3300030054	Palsa	KVPNPHASALGKLGGAARSKKLTPAQRSEIARTAGLARSQKLSPDERKRIAGLGGKASARIPKTKRKEQP
Ga0311353_103770401	3300030399	Palsa	LARVLLMKRKVPNPHASALGKLGGAARSKKLTPAQRSEIARTAGLARSQKLSPDERKRIAGLGGKASARIPKTKRKEQP
Ga0170824_1074495091	3300031231	Forest Soil	PHASALGKLGGTARSKKLSPAQRSEIARKAGLARSQKLSTEERKRIAGLGGKASAGIPKTKRKEQP
Ga0302315_104440452	3300031837	Palsa	MKRRIPNPHASALGKLGGAARSKKLTPAQRTEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKLKE
Ga0306921_117507182	3300031912	Soil	MKKKIPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARIQKLSVEDRKRIAALGGRASAGIPKSKGKEQP
Ga0307479_100154584	3300031962	Hardwood Forest Soil	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGRARSQKLSSEERKRIAALGGKASAGIPKTKQKEQP
Ga0311301_113833901	3300032160	Peatlands Soil	MKRKVPNPHASALGKLGGAARSKKLSPAQRSEIARKAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Ga0307470_112912002	3300032174	Hardwood Forest Soil	MKGKVPNPHASALGKLGGAARSKKLSPAQRSEIARNAGLARSQKLSPEERKRIAALGGKASAGIPKTKRKEQP
Ga0370515_0006710_2699_2929	3300034163	Untreated Peat Soil	MGSLKRRIPNPHASALGKLGGPARSKKLTPARRTEIARKAGLARSQQQSPEERKRLAALGGKASAGIRKTKRKEQP
Ga0370515_0295350_369_584	3300034163	Untreated Peat Soil	MKQKVPNPHASALGKLGGAARSKKLTPAERTAIARKAGLARSQKLSPEERSRISGLGGSASKGTPKTKRKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083164

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences