Metagenome / Metatranscriptome Family F083162

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083162
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	54 residues
Representative Sequence	MSSATESPHGSAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP
Number of Associated Samples	92
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.76 %
% of genes near scaffold ends (potentially truncated)	34.51 %
% of genes from short scaffolds (< 2000 bps)	84.07 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.106 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.584 % of family members)
Environment Ontology (ENVO)	Unclassified (30.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.442 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.37% β-sheet: 0.00% Coil/Unstructured: 64.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07228	SpoIIE	11.61
PF04545	Sigma70_r4	7.14
PF00497	SBP_bac_3	4.46
PF02541	Ppx-GppA	4.46
PF00392	GntR	2.68
PF00211	Guanylate_cyc	1.79
PF02656	DUF202	1.79
PF04020	Phage_holin_4_2	0.89
PF03006	HlyIII	0.89
PF03979	Sigma70_r1_1	0.89
PF00528	BPD_transp_1	0.89
PF01471	PG_binding_1	0.89
PF06724	DUF1206	0.89
PF09985	Glucodextran_C	0.89
PF01494	FAD_binding_3	0.89
PF00118	Cpn60_TCP1	0.89
PF03060	NMO	0.89
PF03449	GreA_GreB_N	0.89
PF00496	SBP_bac_5	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	8.93
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.79
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.79
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	1.79
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.89
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.89
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.89
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.89
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.89
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.89
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.89
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.60 %
Unclassified	root	N/A	23.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.95 %
Unclassified	root	N/A	23.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.40 %
Unclassified	root	N/A	23.89 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.19 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.65 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	24.78 %
Unclassified	root	N/A	23.89 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.31 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.65 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.78 %
Unclassified	root	N/A	23.89 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	3.54 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.65 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.78 %
Unclassified	root	N/A	23.89 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.54 %
Subtercola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola	2.65 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	2.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.78 %
Unclassified	root	N/A	23.89 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	3.54 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	2.65 %
Subtercola boreus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	2.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.78 %
Unclassified	root	N/A	23.89 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	3.54 %
Blastococcus sp. PRF04-17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. PRF04-17	2.65 %
Subtercola boreus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	2.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig113204	Not Available	936	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig130688	Not Available	884	Open in IMG/M
2228664022\|INPgaii200_c1170026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	924	Open in IMG/M
2228664022\|INPgaii200_c1170111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	812	Open in IMG/M
3300000953\|JGI11615J12901_11832888	Not Available	576	Open in IMG/M
3300002568\|C688J35102_119713006	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300004081\|Ga0063454_101722851	Not Available	546	Open in IMG/M
3300004153\|Ga0063455_101583776	Not Available	515	Open in IMG/M
3300004157\|Ga0062590_101236033	Not Available	731	Open in IMG/M
3300004480\|Ga0062592_100721507	Not Available	870	Open in IMG/M
3300004643\|Ga0062591_100677009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300005175\|Ga0066673_10059095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1958	Open in IMG/M
3300005175\|Ga0066673_10060238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1941	Open in IMG/M
3300005175\|Ga0066673_10060238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1941	Open in IMG/M
3300005175\|Ga0066673_10722699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300005180\|Ga0066685_10916458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300005338\|Ga0068868_100183811	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300005354\|Ga0070675_102128168	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005366\|Ga0070659_100168204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1794	Open in IMG/M
3300005406\|Ga0070703_10059990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1242	Open in IMG/M
3300005434\|Ga0070709_10030802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3222	Open in IMG/M
3300005437\|Ga0070710_10157764	Not Available	1404	Open in IMG/M
3300005440\|Ga0070705_100149118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1549	Open in IMG/M
3300005518\|Ga0070699_100034884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4347	Open in IMG/M
3300005539\|Ga0068853_101480535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	657	Open in IMG/M
3300005545\|Ga0070695_100063681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2397	Open in IMG/M
3300005545\|Ga0070695_100197184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1436	Open in IMG/M
3300005546\|Ga0070696_100379966	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300005546\|Ga0070696_101713301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300005547\|Ga0070693_100300352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. PRF04-17	1082	Open in IMG/M
3300005549\|Ga0070704_100324140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1292	Open in IMG/M
3300005549\|Ga0070704_100730082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	880	Open in IMG/M
3300005558\|Ga0066698_10323539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300005576\|Ga0066708_10076476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1940	Open in IMG/M
3300005719\|Ga0068861_100187688	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300006031\|Ga0066651_10170175	Not Available	1148	Open in IMG/M
3300006031\|Ga0066651_10476674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300006032\|Ga0066696_10281460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300006046\|Ga0066652_100086726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2486	Open in IMG/M
3300006046\|Ga0066652_100328827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1368	Open in IMG/M
3300006049\|Ga0075417_10190176	Not Available	968	Open in IMG/M
3300006173\|Ga0070716_100320634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300006173\|Ga0070716_100737157	Not Available	757	Open in IMG/M
3300006196\|Ga0075422_10183470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300006755\|Ga0079222_10150924	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300006804\|Ga0079221_10127342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1296	Open in IMG/M
3300006914\|Ga0075436_100108932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1932	Open in IMG/M
3300009011\|Ga0105251_10489104	Not Available	574	Open in IMG/M
3300009094\|Ga0111539_10639028	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300009094\|Ga0111539_13453329	Not Available	508	Open in IMG/M
3300009098\|Ga0105245_11618948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. PRF04-17	699	Open in IMG/M
3300009176\|Ga0105242_11582058	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300010044\|Ga0126310_10002978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6932	Open in IMG/M
3300010100\|Ga0127440_1106533	Not Available	600	Open in IMG/M
3300010321\|Ga0134067_10346002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300010322\|Ga0134084_10159992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300010371\|Ga0134125_11666892	Not Available	694	Open in IMG/M
3300010371\|Ga0134125_12271884	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300010373\|Ga0134128_10609497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1215	Open in IMG/M
3300010375\|Ga0105239_10481031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1411	Open in IMG/M
3300010396\|Ga0134126_10365489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1681	Open in IMG/M
3300010399\|Ga0134127_10384782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1382	Open in IMG/M
3300010401\|Ga0134121_10118301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2236	Open in IMG/M
3300012201\|Ga0137365_10228099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1388	Open in IMG/M
3300012208\|Ga0137376_11353447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300012354\|Ga0137366_10634962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300012356\|Ga0137371_10220309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1484	Open in IMG/M
3300012356\|Ga0137371_11308327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300012951\|Ga0164300_10032169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1937	Open in IMG/M
3300012951\|Ga0164300_11136485	Not Available	513	Open in IMG/M
3300012961\|Ga0164302_10103746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1578	Open in IMG/M
3300012985\|Ga0164308_11132086	Not Available	703	Open in IMG/M
3300012986\|Ga0164304_10331073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1056	Open in IMG/M
3300013297\|Ga0157378_10460296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1264	Open in IMG/M
3300014157\|Ga0134078_10124631	Not Available	989	Open in IMG/M
3300014157\|Ga0134078_10243342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300014157\|Ga0134078_10278329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300015371\|Ga0132258_10695449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2559	Open in IMG/M
3300018027\|Ga0184605_10001744	All Organisms → cellular organisms → Bacteria	7106	Open in IMG/M
3300018027\|Ga0184605_10028993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	2271	Open in IMG/M
3300018054\|Ga0184621_10015085	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300018482\|Ga0066669_10337779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	1244	Open in IMG/M
3300019767\|Ga0190267_11342631	Not Available	537	Open in IMG/M
3300020008\|Ga0193757_1008293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	981	Open in IMG/M
3300020022\|Ga0193733_1074366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300021445\|Ga0182009_10162153	Not Available	1069	Open in IMG/M
3300021510\|Ga0222621_1131333	Not Available	533	Open in IMG/M
3300021951\|Ga0222624_1226555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300025906\|Ga0207699_11064898	Not Available	598	Open in IMG/M
3300025910\|Ga0207684_11046496	Not Available	681	Open in IMG/M
3300025916\|Ga0207663_10116050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	1825	Open in IMG/M
3300025935\|Ga0207709_10542832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	913	Open in IMG/M
3300025949\|Ga0207667_10255368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1793	Open in IMG/M
3300026306\|Ga0209468_1005887	All Organisms → cellular organisms → Bacteria	4752	Open in IMG/M
3300026330\|Ga0209473_1322959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300026342\|Ga0209057_1028123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3006	Open in IMG/M
3300026548\|Ga0209161_10481892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300026550\|Ga0209474_10031068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4002	Open in IMG/M
3300027775\|Ga0209177_10374406	Not Available	564	Open in IMG/M
3300028711\|Ga0307293_10010574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2578	Open in IMG/M
3300028718\|Ga0307307_10028162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. PRF04-17	1585	Open in IMG/M
3300028784\|Ga0307282_10011334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3587	Open in IMG/M
3300028784\|Ga0307282_10037862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2115	Open in IMG/M
3300028881\|Ga0307277_10006923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4357	Open in IMG/M
3300028881\|Ga0307277_10006928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4356	Open in IMG/M
3300028881\|Ga0307277_10075914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300030902\|Ga0308202_1091942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300030990\|Ga0308178_1098030	Not Available	619	Open in IMG/M
3300031421\|Ga0308194_10033195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1228	Open in IMG/M
3300031422\|Ga0308186_1021702	Not Available	623	Open in IMG/M
3300031938\|Ga0308175_102218589	Not Available	616	Open in IMG/M
3300033412\|Ga0310810_10249863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1952	Open in IMG/M
3300034447\|Ga0370544_24109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.07%
Host-Associated	Host-Associated	15.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.65%
Plants	Host-Associated → Plants	15.93%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.42%
Sediment	Environmental → Aquatic → Sediment	3.54%
Freshwater	Environmental → Aquatic → Freshwater	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.41%
Loam	Environmental → Terrestrial → Soil → Loam	21.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.04%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_01991960	2124908045	Soil	MNSTTESPHGNAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP
KansclcFeb2_11104360	2124908045	Soil	MSSATESPRGAAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATPR
INPgaii200_11700262	2228664022	Soil	MSSATESTHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA
INPgaii200_11701111	2228664022	Soil	MSSATESXXGNXQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA
JGI11615J12901_118328882	3300000953	Soil	MNSTTESPHGNAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP*
C688J35102_1197130061	3300002568	Soil	RNERSYKMTSAPDYPDRTAERRQKELTERLCVMPVRRSKGTNFKWSTWKWRLGMRGEAT*
Ga0063454_1017228511	3300004081	Soil	MTSAPESANRTAERRQKELTERLCVTPVRRSKGTNFKWSTWKWRFGMRGEATQ*
Ga0063455_1015837761	3300004153	Soil	MTSVPESANRTAELRQKELTERLCVTPVRRSKGTNFKWSTWKWRFGMRGEATQ*
Ga0062590_1012360331	3300004157	Soil	MNYATESPPGTTQLQRQKELTERLCVLPARRSRAHNWKWSTWKWRLGMRGEATP*
Ga0062592_1007215073	3300004480	Soil	MNSATESPPGTTQLQRQKELTERLCVLPARRSRAHNWKWSTWKWRLGMRGEATP*
Ga0062591_1006770093	3300004643	Soil	FPPLDERSFKMNYATESPPGTTQLQRQKELTERLCVLPARRSRAHNWKWSTWKWRLGMRGEATP*
Ga0066673_100590952	3300005175	Soil	MNPATESPQRTAHVRRQKELTQRLGVLPARRSTGTNLKWSTWKRRLGMRGEATS*
Ga0066673_100602381	3300005175	Soil	MNSATESPVSGTSERQKQLTQRLGVMPVRRSKAGNLKWSTWKWRLRMRGQA*
Ga0066673_100602384	3300005175	Soil	LTSIDLFEIFKMNSATESPPSHGSSERQKQLTQRLGVMPVRRSKAGNLKWSTWKWRLRMRGQA*
Ga0066673_107226991	3300005175	Soil	SPTESPHGSAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP*
Ga0066685_109164581	3300005180	Soil	MNSATESPVSGTSERQKQLTQRLGVMPVRRSKAGNLKWSTWKWRLRM
Ga0068868_1001838113	3300005338	Miscanthus Rhizosphere	MSSATESPHGNAQLLRQKELTERLCITPVRRSKGHNLSWSTWKWRLRMRGKATA*
Ga0070675_1021281681	3300005354	Miscanthus Rhizosphere	MSSATESPHGNEQLRRQKELTERLCITPVRRGKGHNLNWSTWKWRLRMRGKATA*
Ga0070659_1001682042	3300005366	Corn Rhizosphere	MSSATESPHGNEQLRRQKELTERLCITPVRRGKGHNLNWSTWKWRLRMRGKTTA*
Ga0070703_100599901	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	QMNSATKSPPSHGTTEGLRQKLLTERLGVMPARRSKASNLKWSTWKWRLRMRGPA*
Ga0070709_100308022	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNSATKSPPSHGTTEGLRQKLLTERLGVMPARRSKASNLKWSTWKWRLRMRGPA*
Ga0070710_101577642	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNSATESPHGSAQVQRQKELTERLCVLPARRSKGHNLKWSTWKWRLGMRGEATP*
Ga0070705_1001491182	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKTTA*
Ga0070699_1000348843	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNSATKSPPSHGTTERLRQKLLTERLGVMPARRSKASNLEWSTWKWRLGMRGPA*
Ga0068853_1014805351	3300005539	Corn Rhizosphere	TMSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLSWSTWKWRLRMRGKATAS*
Ga0070695_1000636814	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNSATESPHGTGQLQRQKELTERLCVLPARRSRAHNWKWSTWKWRLGMRGQATP*
Ga0070695_1001971842	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATDSSHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKTTA*
Ga0070696_1003799661	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNSATKSPPSHGTAEGARQKLLTERLGILPARRTKASNLKWSTWKWRL
Ga0070696_1017133011	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ATKSPPSHGTTEGLRQKLLTERLGVMPARRSKASNLKWSTWKWRLRMRGPA*
Ga0070693_1003003523	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNSATESPHGTGQLQRQKELTERLCVLPARRSRAHNWKWNTWKWRLGMRGQATP*
Ga0070704_1003241401	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SHGTTEGLRQKLLTERLGVMPARRSKASNLKWSTWKWRLRMRGPA*
Ga0070704_1007300823	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATDSSHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMR
Ga0066698_103235391	3300005558	Soil	MNSATESPPSHGSSERQKQLTQRLGVMPVRRSKAGN
Ga0066708_100764764	3300005576	Soil	LTWIDLFEIFKMNSATESPPSHGSSERQKQLTQRLGVMPVRRSKAGNLKWSTWKWRLRMRGQA*
Ga0068861_1001876883	3300005719	Switchgrass Rhizosphere	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA*
Ga0066651_101701751	3300006031	Soil	MNAMTESPHGDAQMRRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP*
Ga0066651_104766741	3300006031	Soil	MNSATESPVSGTSERQKQLTQRLGVMPVRRSKAGNL
Ga0066696_102814603	3300006032	Soil	MNSATESPPSHGSSERQKQLTQRLGVMPVRRSKAGNLKWSTWKWRLRM
Ga0066652_1000867263	3300006046	Soil	MSSATESPHGSAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP*
Ga0066652_1003288274	3300006046	Soil	MTSAPETQQGTAERRQKELTERLGVMPMRRSKGTNFKWSTWKWRLGMRGEAPRG*
Ga0075417_101901763	3300006049	Populus Rhizosphere	MNAMTESPHGTAQLRRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP*
Ga0070716_1003206343	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNSATESSHGTAQLQRQKELTERLCILPARRSRAHNLKWSTWKWRLGMRGEATP*
Ga0070716_1007371571	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATDSSHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA*
Ga0075422_101834702	3300006196	Populus Rhizosphere	MNAMTESPHGTEQLRRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP*
Ga0079222_101509242	3300006755	Agricultural Soil	MNSATESPAGNAQLQRQKELTERLCVLPARRSKGHNLKWSTWKWRLGMRGEATP*
Ga0079221_101273421	3300006804	Agricultural Soil	SPAGNAQLQRQKELTERLCVLPARRSKGHNLKWSTWKWRLGMRGEATP*
Ga0075436_1001089321	3300006914	Populus Rhizosphere	MNAMTESPHGTAQLRRQKELTERLCITPVRRSKGHNLKWSTWKWR
Ga0105251_104891041	3300009011	Switchgrass Rhizosphere	MNSATESPAGNAQLQRQKELTERLCVLPARRSKGHNLKWSTWKWRLRMRGPA*
Ga0111539_106390281	3300009094	Populus Rhizosphere	KMNAMTESPHGTAQLRRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP*
Ga0111539_134533291	3300009094	Populus Rhizosphere	MNSATESPHGTGQLQRQKELTERLCVLPARRSRAHNWKWSTWKWRLGMRGQ
Ga0105245_116189481	3300009098	Miscanthus Rhizosphere	MNSATESPHGTGQLQRQKELTERLCVLPARRSRAHNWKWSTWKWRLGM
Ga0105242_115820582	3300009176	Miscanthus Rhizosphere	MNPATESPPIHGNEERLRQKMLTERLGVMPVRRSKTSNFKWSTW
Ga0126310_100029788	3300010044	Serpentine Soil	MSSATESPQGSAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP*
Ga0127440_11065331	3300010100	Grasslands Soil	MNAMTESPHGSAQLQRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP*
Ga0134067_103460022	3300010321	Grasslands Soil	MSSPTESPHGSAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP*
Ga0134084_101599923	3300010322	Grasslands Soil	MNSATKSPPSHGTSERQRQLTQRLGVMPVRRSKAGNLKWSTWKWR
Ga0134125_116668922	3300010371	Terrestrial Soil	MNSATKSPPSHGTAEGARQKLLTERLGILPARRTKASNLKWSTWKWRLRMRGPA*
Ga0134125_122718842	3300010371	Terrestrial Soil	MNSATESAPIHGTEERLRQKELTERLGVMPVRRSKTSNFKWSTWKWRLRMRGGTPA*
Ga0134128_106094972	3300010373	Terrestrial Soil	MNSATESPHGTGQLQRQKELTERLCVLPARRSRAYNWKWSTWKWRLGMRGQATP*
Ga0105239_104810312	3300010375	Corn Rhizosphere	MSSATDSSHGNAQLRRQKELTERLCITPVRRSKGHNLSWSTWKWRLRMRGKATA*
Ga0134126_103654893	3300010396	Terrestrial Soil	MNPASESPPIHGNEERLRQKMLTERLGVMPVRRSKTSNFKWSTWKWRLRMRGETPA*
Ga0134127_103847821	3300010399	Terrestrial Soil	ERSFKMNSATESPHGTGQLQRQKELTERLCVLPARRSRAHNWKWSTWKWRLGMRGQATP*
Ga0134121_101183013	3300010401	Terrestrial Soil	MNPATESPPIHGTEERLRQKELTERLGVMPVRRSKTSNFKWSTWKWRLRMRGGTPA*
Ga0137365_102280992	3300012201	Vadose Zone Soil	MNSATESPHGAAEQRQKELTERLCVMPVRRRKGTNLKWSTWKWRLGMRGEATP*
Ga0137376_113534472	3300012208	Vadose Zone Soil	MSSATESPHGDAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP*
Ga0137366_106349622	3300012354	Vadose Zone Soil	MNSATESPVSGTSERQKQLTQRLGVMPVRRSKAGNLKWSTWKW
Ga0137371_102203091	3300012356	Vadose Zone Soil	MNSATESPVSGTSERQKQLTQRLGVMPVRRSKAGNLKWST
Ga0137371_113083272	3300012356	Vadose Zone Soil	MNSATESPPSHGSSERQKQLTQRLGVMPVRRSKAGNLKWSTWKWRLRMRGQ
Ga0164300_100321693	3300012951	Soil	MNSATKSPPSHGTAEGARQKLLTERLGVLPARRTKASNLKWSTWKWRLRMRGPA*
Ga0164300_111364851	3300012951	Soil	MNPATESPPIHGTEERLRQKELTERLGVTPVRRSKTSNFKWSTWKWRLRMRGGTPA*
Ga0164302_101037462	3300012961	Soil	MNSATKSPPSHGTTEGLRQKMLTERLGVMPARRSKGSNLKWSTWKWRLGMRGPA*
Ga0164308_111320862	3300012985	Soil	MNSATESPPSHGTAEGARQKLLTERLGVLPARRTKASNLKWSTWKWRLRMRGPA*
Ga0164304_103310731	3300012986	Soil	PSHGTTEGLRQKMLTERLGVMPARRSKGSNLKWSTWKWRLGMRGPA*
Ga0157378_104602961	3300013297	Miscanthus Rhizosphere	MSSATESPHGNAQLRRQKELTERLCITPVRRGKGHNLNWSTWKWRLRMRGKATA*
Ga0134078_101246312	3300014157	Grasslands Soil	DLFEIFKMNSATESPVSGTSERQKQLTQRLGVMPVRRSKAGNLKWSTLKWRLRMRGQA*
Ga0134078_102433423	3300014157	Grasslands Soil	RVFPTLDERSYKMNAMTESPHGGAQMRRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP*
Ga0134078_102783291	3300014157	Grasslands Soil	RSYKMNPATESPQRTAHVRRQKELTQRLGVLPARRSTGTNLKWSTWKRRLGMRGEATS*
Ga0132258_106954492	3300015371	Arabidopsis Rhizosphere	MNAMTESPHGTAQLQRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP*
Ga0184605_100017444	3300018027	Groundwater Sediment	MNSATEPSHGSAQLRRQKELTERLCVMPVRRSKGNNLKWSTWKWRLRMRGEATP
Ga0184605_100289931	3300018027	Groundwater Sediment	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA
Ga0184621_100150853	3300018054	Groundwater Sediment	MSSATDSSPGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA
Ga0066669_103377792	3300018482	Grasslands Soil	MNAMTESPHGSAQLQRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP
Ga0190267_113426312	3300019767	Soil	MSSATDSSPGNAQLQRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA
Ga0193757_10082932	3300020008	Soil	MSTATESPPIHGTEERLRQKELTERLGITPVRRSKTSNFKWSTWKWRLRMRGETPA
Ga0193733_10743662	3300020022	Soil	PIHGTAARLRQKELTERLGVMPVRRSKTSNFKWSTWKWRLRMRGDVAA
Ga0182009_101621531	3300021445	Soil	MNAMTESPHGTAQLRRQKELTERLCITPVRRSKGHNLKWSTWKWRLGMRGEATP
Ga0222621_11313332	3300021510	Groundwater Sediment	VFPTLAERSYTMSSATDSSPGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA
Ga0222624_12265551	3300021951	Groundwater Sediment	MNPVTESPPIHGTAERLRQKELTERLGVMPVRRSKTSNFKWSTWKWRLRMRGDVAA
Ga0207699_110648981	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATDSSHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKATA
Ga0207684_110464962	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLRMRGKTTA
Ga0207663_101160502	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLSWSTWKWRLRMRGKATAS
Ga0207709_105428322	3300025935	Miscanthus Rhizosphere	MNSATESPHGTGQLQRQKELTERLCVLPARRSRAHNWKWNTWKWRLGMRGQATP
Ga0207667_102553684	3300025949	Corn Rhizosphere	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLSWSTWKWRLRMRGKATA
Ga0209468_10058874	3300026306	Soil	MSSPTESPHGSAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP
Ga0209473_13229593	3300026330	Soil	YKMNPATESPQRTAHVRRQKELTQRLGVLPARRSTGTNLKWSTWKRRLGMRGEATS
Ga0209057_10281233	3300026342	Soil	MNPATESPQRTAHVRRQKELTQRLGVLPARRSTGTNLKWSTWKRRLGMRGEATS
Ga0209161_104818921	3300026548	Soil	IFKMNSATESPPSHGSSERQKQLTQRLGVMPVRRSKGGNLKWSTWKWRLRMRGQA
Ga0209474_100310685	3300026550	Soil	MNSATESPVSGTSERQKQLTQRLGVMPVRRSKAGNLKWSTWKWRLRMRGQA
Ga0209177_103744061	3300027775	Agricultural Soil	MNSATESPAGNAQLQRQKELTERLCVLPARRSKGHNLKWSTWKWRLGMRGEATP
Ga0307293_100105742	3300028711	Soil	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLGMRGKANA
Ga0307307_100281622	3300028718	Soil	MNSATESSHGSAQLRRQKELTERLCVMPVRRSKGNNLKWSTWKWRLRMRGEATP
Ga0307282_100113344	3300028784	Soil	MSSATDSSHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWRWRLRMRGKATA
Ga0307282_100378623	3300028784	Soil	MSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLGMRGKATA
Ga0307277_100069235	3300028881	Soil	MSPATESPHGNAQLQRQKELTERLCITPVRRSKGTNLKWSTWKWRLRMRGEATP
Ga0307277_100069281	3300028881	Soil	MSSATESPHGSAQLRRQKELTERLCITPVRRSKGTNLKWSTWKWRLGMRGEATP
Ga0307277_100759142	3300028881	Soil	MNSATESPHGSTELRRQKELTERLCVMPVRRSKGTNLKWSTWKWRLGMRGEATP
Ga0308202_10919421	3300030902	Soil	MSSATESPPIHGTEERLRQKELTERLGVTPVRRSKGSNFKWSTWKWRLRMRGETPA
Ga0308178_10980301	3300030990	Soil	RVFPTLAERSYTMSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLGMRGKATA
Ga0308194_100331951	3300031421	Soil	PTLAERSYTMSSATESPHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLGMRGKATA
Ga0308186_10217021	3300031422	Soil	VFPTLAERSYTMSSATDSSHGNAQLRRQKELTERLCITPVRRSKGHNLNWSTWKWRLGMRGKATA
Ga0308175_1022185891	3300031938	Soil	MSSATESPHGSAQLQRQKELTERLCITPVRRSKGTNLKWSTWKWRFGMRGEATP
Ga0310810_102498633	3300033412	Soil	MNSATESPHGTAQLQRQKELTERLCVVPAQRSSAHNLKWSTWKWRLGMRGEATP
Ga0370544_24109_193_363	3300034447	Soil	MNPVTESPPIHGTAERLRQKELTERLGVMPVRRSKTSNFKWSTWKWRLRMRGETPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083162

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences