 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F083159 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 113 |
| Average Sequence Length | 48 residues |
| Representative Sequence | GSFHTLRFGEKKPFTGSFHNGQLDLFYYRDPGLKAGKSFPLWTIM |
| Number of Associated Samples | 91 |
| Number of Associated Scaffolds | 113 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 1.80 % |
| % of genes near scaffold ends (potentially truncated) | 97.35 % |
| % of genes from short scaffolds (< 2000 bps) | 93.81 % |
| Associated GOLD sequencing projects | 86 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.26 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (76.991 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.434 % of family members) |
| Environment Ontology (ENVO) | Unclassified (29.204 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (64.602 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 4.11% β-sheet: 16.44% Coil/Unstructured: 79.45% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.26 |
| Powered by PDBe Molstar | |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 113 Family Scaffolds |
|---|---|---|
| PF00543 | P-II | 9.73 |
| PF13466 | STAS_2 | 2.65 |
| PF00072 | Response_reg | 1.77 |
| PF02201 | SWIB | 1.77 |
| PF01381 | HTH_3 | 1.77 |
| PF13384 | HTH_23 | 1.77 |
| PF00561 | Abhydrolase_1 | 0.88 |
| PF07366 | SnoaL | 0.88 |
| PF12850 | Metallophos_2 | 0.88 |
| PF01872 | RibD_C | 0.88 |
| PF02915 | Rubrerythrin | 0.88 |
| PF03118 | RNA_pol_A_CTD | 0.88 |
| PF02803 | Thiolase_C | 0.88 |
| PF00528 | BPD_transp_1 | 0.88 |
| PF00440 | TetR_N | 0.88 |
| PF14417 | MEDS | 0.88 |
| PF06202 | GDE_C | 0.88 |
| PF00199 | Catalase | 0.88 |
| PF00583 | Acetyltransf_1 | 0.88 |
| PF00149 | Metallophos | 0.88 |
| COG ID | Name | Functional Category | % Frequency in 113 Family Scaffolds |
|---|---|---|---|
| COG0347 | Nitrogen regulatory protein PII | Signal transduction mechanisms [T] | 9.73 |
| COG5531 | DNA-binding SWIB/MDM2 domain | Chromatin structure and dynamics [B] | 1.77 |
| COG0183 | Acetyl-CoA acetyltransferase | Lipid transport and metabolism [I] | 0.88 |
| COG0202 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit | Transcription [K] | 0.88 |
| COG0262 | Dihydrofolate reductase | Coenzyme transport and metabolism [H] | 0.88 |
| COG0753 | Catalase | Inorganic ion transport and metabolism [P] | 0.88 |
| COG1985 | Pyrimidine reductase, riboflavin biosynthesis | Coenzyme transport and metabolism [H] | 0.88 |
| COG3408 | Glycogen debranching enzyme (alpha-1,6-glucosidase) | Carbohydrate transport and metabolism [G] | 0.88 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 76.99 % |
| All Organisms | root | All Organisms | 23.01 % |
| Visualization |
|---|
| Powered by ApexCharts |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 27.43% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 14.16% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 7.08% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 7.08% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 6.19% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 6.19% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 3.54% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.54% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.65% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.65% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 2.65% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 2.65% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.77% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 1.77% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.77% |
| Attine Ant Fungus Gardens | Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens | 1.77% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.89% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.89% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.89% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.89% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 0.89% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
| Simulated | Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated | 0.89% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2166559005 | Simulated microbial communities from Lyon, France | Engineered | Open in IMG/M |
| 2170459009 | Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm | Environmental | Open in IMG/M |
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300003368 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 | Environmental | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
| 3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006860 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009672 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG | Environmental | Open in IMG/M |
| 3300009700 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG | Environmental | Open in IMG/M |
| 3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300011003 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015 | Environmental | Open in IMG/M |
| 3300011089 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
| 3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
| 3300012180 | Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG | Host-Associated | Open in IMG/M |
| 3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
| 3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
| 3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300022713 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025320 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027439 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027565 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027603 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027609 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027684 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027737 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027738 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027795 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027824 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
| 3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028450 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300028746 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1 | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300030503 | III_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031122 | Oak Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031469 | Fir Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
| 3300031572 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19 | Environmental | Open in IMG/M |
| 3300031713 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22 | Environmental | Open in IMG/M |
| 3300031893 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28 | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300033289 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| cont_0549.00001660 | 2166559005 | Simulated | LGSFRTLRFGERKPFTGSCYHGQLDLFYYRDPGLKAGKSFPLWTIM |
| F47_07122130 | 2170459009 | Grass Soil | SFRALRFGKKIPFTGSCHNGQLDLFYYRDPGLKAGKSFPLWTVQ |
| F47_05105600 | 2170459009 | Grass Soil | AAKPFHGTCNNGQLDLFYYRDPGLITGKSFPLWEIQ |
| JGIcombinedJ26739_1002264604 | 3300002245 | Forest Soil | FNTLTFGEKKPFIGSCHNGRLDLIYCVDPGLKTGGPFPLWKID* |
| JGIcombinedJ26739_1008199482 | 3300002245 | Forest Soil | TLAFGEKKPSAGSYHNGRLDLVYYMDPGLKTGGPFPLWRID* |
| JGIcombinedJ26739_1015013971 | 3300002245 | Forest Soil | SQYRILVQIELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDLGIKAGKSFPLWTIM |
| JGI26340J50214_100491354 | 3300003368 | Bog Forest Soil | QIELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLXYYRDPGXKAGKSFPLWTIM* |
| JGI26340J50214_101115782 | 3300003368 | Bog Forest Soil | NQYRVLVQIELEKYLGSFRTLRFGESKPFHGTCHNGQLDLFYYRDPGLRTGKSFPLWTIQ |
| JGI26340J50214_101437671 | 3300003368 | Bog Forest Soil | RILVQIELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGLKAGKSFPLWTIM* |
| Ga0062389_1004284991 | 3300004092 | Bog Forest Soil | VLVQIELEKYLGSFRTLRFGESKPFHGTCHNGQLDLFYYRNPGLKTGKSFPLWTIQ* |
| Ga0066388_1019795824 | 3300005332 | Tropical Forest Soil | GSFHTLSFGESKPFTGACHNGKVDLFYYGDPGVKVGQPFPLWTIQ* |
| Ga0070714_1020270712 | 3300005435 | Agricultural Soil | VLVQIELEKYLASFRTLRFGESKPFHGTCHNGQLDLFYYRNPGLKTGKSFPLWT |
| Ga0070711_1009307671 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | TLRFGEQIPFSGTCFHGQLDLFYYRDPGVKAGKSFPLWTIM* |
| Ga0070697_1001453971 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | VQIELEKYLGSFHSLRFGERKPFTGTYYNGQLDLFYYRDPGLKAGKSFPLWTLSD* |
| Ga0070697_1005279781 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | YRVLVQIELEKYLGSFQSFRFGKNKRFTGTCYHGQLDLFYYRDPGLIAGKSFPLWTKK* |
| Ga0066700_108813171 | 3300005559 | Soil | YRILVQIELEKYLGSFHTLRFGEKKPFIGSCHNGQLDLFYYRDPGIKAGKSFPLWTIMLP |
| Ga0070763_100486764 | 3300005610 | Soil | RFGKKIPFTGSCHKGQLDLFYYRDPGLKAGKSFPLWTVQ* |
| Ga0075029_1005637631 | 3300006052 | Watersheds | FGERKPFTGSCHNGQLDLFYRDPGIKVGKSFPLWTIM* |
| Ga0075019_110632632 | 3300006086 | Watersheds | FGESKPFYGTCYNRQLDLFYYRDPGLKIGKSFPLWTIQ* |
| Ga0070716_1003676781 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MQIELEKYLGSFQSFRFGKNKPFTGTCYHGQLDLFYYRDPGLKAGNSFPLWTKK* |
| Ga0070716_1015499001 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | FGEKKPFMGFTHNGRLDLVYHEDPHLKAGQPFPLWTIQ* |
| Ga0070765_1006712093 | 3300006176 | Soil | SFRTLRFGESKPFHGTCHNGQLDLFYYRDPGLKTGKSFPLWTLQ* |
| Ga0063829_13936151 | 3300006860 | Peatlands Soil | KKPFTGSCYHGQLDLFYYRDPGLKVGKSFPLWTIM* |
| Ga0073928_101325723 | 3300006893 | Iron-Sulfur Acid Spring | ELEKYLGSFRTLRFGESKPFHGTCHNGQLDLFYYRDPGLKTGKSFPLWTII* |
| Ga0099829_113332182 | 3300009038 | Vadose Zone Soil | GENKPFTGFCHNGQLDLFYYRDPGLKAGKSFPLWTIQ* |
| Ga0105250_101491771 | 3300009092 | Switchgrass Rhizosphere | LRKFRGSFNTLTFGEKKPFIGSCHNGRLDLVYCVDPGLKTGGPFPLWRID* |
| Ga0116215_14623321 | 3300009672 | Peatlands Soil | SQYRILVQIELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYRDPGIEVGKSFPLWTIM* |
| Ga0116217_101857282 | 3300009700 | Peatlands Soil | VLVQIELEKYLGRFHTLRFGESKPFTGTCHNGQLDLFYYRDPGLKAGKSFPLWTIR* |
| Ga0074046_102603771 | 3300010339 | Bog Forest Soil | QIELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGTKAGKSFPLWTIM* |
| Ga0074046_107242581 | 3300010339 | Bog Forest Soil | YRVLVQIELEKYLGSFRTLRFGESKPFHGTCYNRQLDLFYYRDPGLKIGKSFPLWTIQ* |
| Ga0074044_105153271 | 3300010343 | Bog Forest Soil | QYRILVQIELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGTKAGKSFPLWTIM* |
| Ga0136449_1012511022 | 3300010379 | Peatlands Soil | FGEKKPFTGFCRDGQLDLVYFQDPGLEAGESFPLWTIK* |
| Ga0136449_1013836641 | 3300010379 | Peatlands Soil | KPFTGSCHNGQLDLFYYRDPGIKAGKSFPLWTIM* |
| Ga0138514_1001077752 | 3300011003 | Soil | ELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGVKAGKSFPLWTIM* |
| Ga0138573_12577553 | 3300011089 | Peatlands Soil | EKKPFTGSCYHGQLDLFYYRDPGLKVGKSFPLWTIM* |
| Ga0150983_105904131 | 3300011120 | Forest Soil | LVQIELEKYLGSFRTLRFGESKPFHGTCHDGQLDLFYYRDPGLKTGKSFPLWTIQ* |
| Ga0150983_119821101 | 3300011120 | Forest Soil | TLRFGERIPFTGSCHNRQLDLFYYRDPGLKAGKAFPLWTIQ* |
| Ga0150983_156128691 | 3300011120 | Forest Soil | QIMLRKFRGSFNTLTFGEKKPFIGSCHNGRLDLVYCVDPGLKTGGPFPLWRID* |
| Ga0153974_10799842 | 3300012180 | Attine Ant Fungus Gardens | RGSFHTLQFGEKKPFIGFTHNGRLDLVYHEDPHLKAGQPFPLWTIQ* |
| Ga0153974_11822581 | 3300012180 | Attine Ant Fungus Gardens | TLRFGKSKPFTGTCYHGKLDLFYYRDPGLKVGKPFPLWTIK* |
| Ga0137383_106066182 | 3300012199 | Vadose Zone Soil | LVQIELDKYLGSFHTLRFGEKKPFTGSCHNGKLDLFYYRDPGIKAGKSFPLWTIM* |
| Ga0137386_105942763 | 3300012351 | Vadose Zone Soil | ELDKYLGSFHALRCGEKKPVTGSCHNGKLDLFYYRDPGIKAGKSFPLWTIM* |
| Ga0137361_113018971 | 3300012362 | Vadose Zone Soil | ELEKYLGPFHTLRFGESIPFTGTCHNGQLDLFYYRDPGLKKGKSFPLWTIQ* |
| Ga0137358_105471151 | 3300012582 | Vadose Zone Soil | RFGKREPFTGTCYRGQLDLFYYRDPGLQAGNSFPLWRIVRF* |
| Ga0137359_110549713 | 3300012923 | Vadose Zone Soil | FGERKPFTGSCYHGQLDLFYSRDPGLKAGKSFPLWTIM* |
| Ga0164299_108718591 | 3300012958 | Soil | HVLVQIELEKYIGPFHSLRFAGESKPFRGNCHSSQLDLFYGKNPGLKAGQSFSLWSIQ* |
| Ga0164302_109934322 | 3300012961 | Soil | QYRVLVQIELEKYLGSFRTLRFGERKPFTGSCYHGQLDLFYYRDPGLKAGKSFPLWTIM* |
| Ga0164309_114278861 | 3300012984 | Soil | ELEKYLGSFRTLRFGAAKPFHGTCHNGQLDLFYYRDPGLKTGNSFPLWTIQ* |
| Ga0157376_122823671 | 3300014969 | Miscanthus Rhizosphere | LEKYLGSFQSFRFGKNKRFTGTCYHGQLDLFYYRDPGLIAGKSFPLWTKK* |
| Ga0137412_107750281 | 3300015242 | Vadose Zone Soil | TLRFGEKKPFTGSCHNGQLDLFYYRDPGLKAGKSFPLWTIM* |
| Ga0182037_120063781 | 3300016404 | Soil | DQYNVIVRIGLAKYRSSFNTPAFGENKPFTGSCHNGQLDLFYYRDPGLKAGKSFPLWTIQ |
| Ga0210407_107428641 | 3300020579 | Soil | GKNKPFTGSFYHGQLDLFYYRDPGLKAGKPFPLWTIT |
| Ga0210403_110097461 | 3300020580 | Soil | KKPFTGSCHNGQLDLFYYRDPGLKAGKSFPLWTIM |
| Ga0210395_105166132 | 3300020582 | Soil | RVLVQIELDRYLGSFHHLKFGKRKPFTGSFYHGQLDLFYYRDPGLKAGKPFPLWTIK |
| Ga0210401_105857202 | 3300020583 | Soil | YRVLVQIELEKYLGSFRTLRFGESKPFHGTCHNSQLDLFYYRDPGLKAGKSFPLWTIQ |
| Ga0210404_102407001 | 3300021088 | Soil | KYRGSFNTLKFGEKKPFTGFCRDGQLDLVYFQDPGLEAGESFPLWTIQ |
| Ga0210406_110538482 | 3300021168 | Soil | IELEKYLGSFRTLRFGERKPFTGSCYHGQLDLFYYRDPGLKAGKSFPLWTIM |
| Ga0210405_103092002 | 3300021171 | Soil | KVIVRIALAKYRGSFNTLAFGENKPSTGFCHNGQLDLFYYRDSGLKAGKSFPLWTIQ |
| Ga0210405_107029032 | 3300021171 | Soil | KFGEKKPSTGFTHNGQLDLVYHKDPHLKTGQPFPLWTIM |
| Ga0210405_112574921 | 3300021171 | Soil | GERIPFTGSCHNRQLDLFYYRDPGLKAGKAFPLWTIQ |
| Ga0210388_104663551 | 3300021181 | Soil | VQIELDQYLGSFRALRFGKKIPFTGSCHKGQLDLFYYRDPGLKAGKSFPLWTVQ |
| Ga0210388_105588431 | 3300021181 | Soil | RFGEKKPFIGSCHNGQLDLFYYRDPGLKAGKSFPLWTIM |
| Ga0210387_117605621 | 3300021405 | Soil | ELEKYVGSFHTLVFGKRRPFTGSCYKGQLDLFYYRDPGLKAGKPFPLWTIK |
| Ga0210383_114885411 | 3300021407 | Soil | SSQYRVLVQIELEKYLGSFRTLRFGERKPFTGSCYHGQLDLFYYRDPGLKAGEPFPLWTI |
| Ga0210384_103260421 | 3300021432 | Soil | YRVLVQIELEKYVGSFHTLVFGKRRPFTGSCYKGQLDLFYYRDPGLKAGKPFPLWTIK |
| Ga0210392_105664953 | 3300021475 | Soil | KFGKRKPFTGSFYHGQLDLFYYRDPGLKAGKPFPLWTIT |
| Ga0210398_107711251 | 3300021477 | Soil | LEKYLGSCRTLRFGERKPFTGSCYHGQLDLFYYRDPGLKAGKSFPLWTIM |
| Ga0210402_119870642 | 3300021478 | Soil | VQIELEKYLGSFHTLRFGERKPFTGSCHNGQLDLFYYRDPGLKAGKSFPLWTIT |
| Ga0210410_117855461 | 3300021479 | Soil | QIEFEKYLGSFRTFRFGKKKPFTGTCYHGQLDLFYYRDPGLKAGKSFPLWTII |
| Ga0210409_102300291 | 3300021559 | Soil | IVRIGLTKYRGSFNTLKFGEKKPFTGFCRDGQLDLVYFQDPGLEAGEAFPLWTIQ |
| Ga0210409_103819071 | 3300021559 | Soil | YLGSFRTFRFGKKKPFTGTCYHGQLDLFYYRDPGLKAGKSFPLWTII |
| Ga0242677_10188791 | 3300022713 | Soil | LAFGENKPFTDLCHNAQLDLFYYRYPGLKAGKSFPLWTVL |
| Ga0209171_10000358132 | 3300025320 | Iron-Sulfur Acid Spring | KFGEKKPLTGFTHNGQLDLVYHEDPHLKAGQPFPLWTIQ |
| Ga0207685_105369421 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | LEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGIKAGKSFPLWTIM |
| Ga0207665_110492181 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | NFGEKKPFTGFTQNGQLDLVYHKDPHLKAGQPFPLWTIQ |
| Ga0207665_114038522 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | QFGEKKPFMGFTHNGRLDLVYHEDPHLKAGQPFPLWTIQ |
| Ga0209332_10507251 | 3300027439 | Forest Soil | SQYRILVQIELERYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGIKAGKSFPLWTIR |
| Ga0209219_10655481 | 3300027565 | Forest Soil | SSQYRILVQIELERYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGIKAGKSFPLWTI |
| Ga0209331_10220621 | 3300027603 | Forest Soil | SQYRVLVQIELEKYLGSFQSFRFGKNKPFTGTCYHGQLDLFYYRDPGLKAGNSFPLDKK |
| Ga0209331_10724701 | 3300027603 | Forest Soil | LKFGEKKPFTGFCRDGQLDLVYYQDPGLEAGQSFPLWTIQ |
| Ga0209331_11703731 | 3300027603 | Forest Soil | SFNTLAFGEKKPSAGSYHNGRLDLVYYMDPGLKTGGPFPLWRID |
| Ga0209221_10316471 | 3300027609 | Forest Soil | RGSFHTLTFGDRKPFTGFSHNGQLDLVYDEDPHLKAGQPFPLWTIQ |
| Ga0209736_11191262 | 3300027660 | Forest Soil | YLGSFHTLRFGEQIPFTGTCFHGQLDLFYYRDPGVKAGKSFPLWTIM |
| Ga0209626_10634991 | 3300027684 | Forest Soil | SSQYRIRVQIELEKYIGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPSIKAGKSFPLWTI |
| Ga0209038_100137521 | 3300027737 | Bog Forest Soil | KKPFTGFCRDGQLDLVYFQDPGLEAGESFPLWTIQ |
| Ga0208989_102915641 | 3300027738 | Forest Soil | LVQIELEKYLGSFHTLRFGESKPFTGKCHNGQLDLFYYRDPGLKEGKSFPLWTIQ |
| Ga0209139_102810831 | 3300027795 | Bog Forest Soil | NTLKFGEKKPFTGFTHNGQLDLVYHKDPHLKAGQPFPLWTIQ |
| Ga0209040_101913291 | 3300027824 | Bog Forest Soil | IELEKYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGTKAGKSFPLWTIM |
| Ga0209380_106120652 | 3300027889 | Soil | EKKPFMGFTHNGQLDLVYREDPHLEAGQPFPLWTIQ |
| Ga0209698_113712541 | 3300027911 | Watersheds | GSFHTLRFGEKKPFTGSFHNGQLDLFYYRDPGLKAGKSFPLWTIM |
| Ga0209526_109465192 | 3300028047 | Forest Soil | GSFLTLKFGEKKPFTGFTHNGQLDLVYHEDPHLKAGQVFPLWTIQ |
| Ga0189898_10219911 | 3300028450 | Peatlands Soil | KKPFTGSCYHGQLDLFYYRDPGLKVGKSFPLWTIM |
| Ga0302233_103864671 | 3300028746 | Palsa | KKPFIGSYHNGRLDLVYYRDPGLKTGGPFPLWRLD |
| Ga0308309_110433992 | 3300028906 | Soil | TLNFGEKKPFTGFTHNGQLDLVYHKDPHLKAGQPFPLWTIQ |
| Ga0222749_100499961 | 3300029636 | Soil | AEKKPFTGFTHNGHLDLIYREDPHLKAGQPFPLWTIQ |
| Ga0222749_101218943 | 3300029636 | Soil | AKYRGSFNTLAFGENKPFTGSCHNGQLDLFYYRDPGLKAGKSFPLSTIQ |
| Ga0222749_101230281 | 3300029636 | Soil | LVQIELEQYLGSFHTLRFGEKKPFTGSCHNGQLDLFYYRDPGLKAGKSFPLWTIM |
| Ga0222749_104865381 | 3300029636 | Soil | LGSFYTLRFGERKPFTGACHNGQVDLFYYRDPGVKAGKPFPLWTIH |
| Ga0311338_113604131 | 3300030007 | Palsa | QSFRFGNNKPFTGTCYHGQLDLSYYRDPGLKTEKFFPLGKEN |
| Ga0311370_106972273 | 3300030503 | Palsa | SFNTLTFGEKKPFIGSYHNGRLDLVYYRDPGLKTGGPFPLWRLD |
| Ga0170834_1115224962 | 3300031057 | Forest Soil | VQIELDQYLGSFRALRFGKKIPFTGSCHNGQLDLFYYRDPGLKAGK |
| Ga0170822_122822362 | 3300031122 | Forest Soil | VVVRIGFPRYRGSFLTLKFGEKKPFTGFTHNGKLDLVYHEDPHLKAGQPFPLWTIQ |
| Ga0170824_1235249301 | 3300031231 | Forest Soil | RYRGSFLTLKFGEKKPFTGFTHNGQLDLVYHEDPHLKAGQPFPLWTIQ |
| Ga0170819_103645531 | 3300031469 | Forest Soil | KYLGSFHTLRFGEKRPFTGTCYRGQLDLFYYRDPGLKAGKPFPLWTIM |
| Ga0318516_106751791 | 3300031543 | Soil | YLGSFHTLRFGESKPFWGACHYGKVELFYYRDPGVRKGNPFPLWTIQ |
| Ga0318515_101069441 | 3300031572 | Soil | FGESKPFWGACHYGKVELFYYRDPGVRKGNPFPLWTIQ |
| Ga0318496_108350023 | 3300031713 | Soil | RFGESKPFTDACHNGKVDLFYYGDPGVKVGQPFPLWTIQ |
| Ga0318536_101614484 | 3300031893 | Soil | SQYRVLVQIELDRYLGSFHTLRFGESKPFWGACHYGKVELFYYRDPGVRKGNPFPLWTIQ |
| Ga0318520_103675642 | 3300031897 | Soil | IELEKYLGSLHTLRFGEKKPFTGSCHNGQLDLFYYRDPGIKAGKSFPLWTIM |
| Ga0306923_110145983 | 3300031910 | Soil | LRFGESKPFTGACHNGKVDLFYYGDPGVKVGQPFPLWTIQ |
| Ga0311301_102745307 | 3300032160 | Peatlands Soil | VQIELDKYLGSFHTLRFGKSKPFTGSCYHGQLDLFYYRDPGLKIGKSFPLWALI |
| Ga0307472_1015785692 | 3300032205 | Hardwood Forest Soil | QYRVLVQIELERYQGSFHTLRFGESKPFAGTGHNGQLDLFYYRDLGVKVGKPFPLS |
| Ga0310914_103121895 | 3300033289 | Soil | LDRYLGSFHTLRFGESKPFWGACHYGKVELFYYRDPGVRKGNPFPLWTIQ |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |