Metagenome / Metatranscriptome Family F083158

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083158
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	105 residues
Representative Sequence	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
Number of Associated Samples	108
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.73 %
% of genes near scaffold ends (potentially truncated)	21.24 %
% of genes from short scaffolds (< 2000 bps)	99.12 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.956 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.929 % of family members)
Environment Ontology (ENVO)	Unclassified (53.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.947 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.15% β-sheet: 6.60% Coil/Unstructured: 79.25%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04392	ABC_sub_bind	66.67
PF12323	HTH_OrfB_IS605	1.80
PF07883	Cupin_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	66.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.96 %
Unclassified	root	N/A	15.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.96 %
Unclassified	root	N/A	15.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.96 %
Unclassified	root	N/A	15.04 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.60 %
Unclassified	root	N/A	15.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.29 %
Unclassified	root	N/A	15.04 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34.51 %
Unclassified	root	N/A	15.04 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	25.66 %
Unclassified	root	N/A	15.04 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	25.66 %
Unclassified	root	N/A	15.04 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.04 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.88 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.04 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.77 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.88 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.88 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.88 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_145047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1266	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1831359	Not Available	826	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1831359	Not Available	826	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105099258	Not Available	520	Open in IMG/M
3300002568\|C688J35102_120625730	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300004081\|Ga0063454_101712208	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005168\|Ga0066809_10076039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300005330\|Ga0070690_101751612	Not Available	506	Open in IMG/M
3300005331\|Ga0070670_100896506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	804	Open in IMG/M
3300005344\|Ga0070661_100795842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300005347\|Ga0070668_101698441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300005355\|Ga0070671_100235841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1553	Open in IMG/M
3300005356\|Ga0070674_100230260	All Organisms → cellular organisms → Bacteria → Proteobacteria	1446	Open in IMG/M
3300005364\|Ga0070673_100481877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1120	Open in IMG/M
3300005437\|Ga0070710_11263890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300005438\|Ga0070701_10598886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300005444\|Ga0070694_101655449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300005535\|Ga0070684_100971731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	797	Open in IMG/M
3300005543\|Ga0070672_101367998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	633	Open in IMG/M
3300005544\|Ga0070686_101436748	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005548\|Ga0070665_102592083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300005564\|Ga0070664_100555647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1062	Open in IMG/M
3300005615\|Ga0070702_100244080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1214	Open in IMG/M
3300005616\|Ga0068852_102238272	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005719\|Ga0068861_100194894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1696	Open in IMG/M
3300005764\|Ga0066903_107603811	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005840\|Ga0068870_10467060	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300006028\|Ga0070717_12143131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300006173\|Ga0070716_100369471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	1021	Open in IMG/M
3300006358\|Ga0068871_101266576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300006575\|Ga0074053_11802658	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300006578\|Ga0074059_12142538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	635	Open in IMG/M
3300006579\|Ga0074054_11688667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300006580\|Ga0074049_12735689	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300006606\|Ga0074062_12973338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300009092\|Ga0105250_10537599	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009101\|Ga0105247_10738242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300009101\|Ga0105247_11368734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300009176\|Ga0105242_10875615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	896	Open in IMG/M
3300009177\|Ga0105248_10617199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300009545\|Ga0105237_10738278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300010366\|Ga0126379_12590759	Not Available	605	Open in IMG/M
3300010375\|Ga0105239_10841710	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300010375\|Ga0105239_11439353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	796	Open in IMG/M
3300010397\|Ga0134124_10518256	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300010400\|Ga0134122_11337783	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300010403\|Ga0134123_11772998	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300011119\|Ga0105246_10658156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300012212\|Ga0150985_110664012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	679	Open in IMG/M
3300012905\|Ga0157296_10312396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300012957\|Ga0164303_10193686	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300012960\|Ga0164301_11300514	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012961\|Ga0164302_10341004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	997	Open in IMG/M
3300012987\|Ga0164307_10220122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1305	Open in IMG/M
3300013296\|Ga0157374_11822122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	634	Open in IMG/M
3300013297\|Ga0157378_11543153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	709	Open in IMG/M
3300013307\|Ga0157372_10882609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1038	Open in IMG/M
3300013308\|Ga0157375_11412816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300013308\|Ga0157375_12353951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	635	Open in IMG/M
3300014325\|Ga0163163_10436858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1368	Open in IMG/M
3300014326\|Ga0157380_10217362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1707	Open in IMG/M
3300014745\|Ga0157377_11764414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	501	Open in IMG/M
3300014968\|Ga0157379_10874105	Not Available	852	Open in IMG/M
3300014968\|Ga0157379_10874105	Not Available	852	Open in IMG/M
3300014969\|Ga0157376_12203011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300015371\|Ga0132258_11332009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1814	Open in IMG/M
3300015374\|Ga0132255_101976090	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300016294\|Ga0182041_11251853	Not Available	678	Open in IMG/M
3300017965\|Ga0190266_10593112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300018469\|Ga0190270_12677076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300018476\|Ga0190274_12342139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	631	Open in IMG/M
3300021082\|Ga0210380_10351703	Not Available	673	Open in IMG/M
3300021560\|Ga0126371_11755447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	743	Open in IMG/M
3300022756\|Ga0222622_11407825	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300025898\|Ga0207692_11044211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300025900\|Ga0207710_10335554	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300025903\|Ga0207680_10456066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300025904\|Ga0207647_10310139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	897	Open in IMG/M
3300025915\|Ga0207693_10327446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1199	Open in IMG/M
3300025919\|Ga0207657_11406720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300025923\|Ga0207681_10609379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	903	Open in IMG/M
3300025927\|Ga0207687_11338196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	616	Open in IMG/M
3300025935\|Ga0207709_10626535	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300025936\|Ga0207670_11582741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300025937\|Ga0207669_10387542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1091	Open in IMG/M
3300025938\|Ga0207704_11277317	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300025941\|Ga0207711_11099048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	736	Open in IMG/M
3300025942\|Ga0207689_10372310	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300025944\|Ga0207661_11651565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	586	Open in IMG/M
3300025945\|Ga0207679_10942822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300025961\|Ga0207712_11119920	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300026088\|Ga0207641_10385745	Not Available	1343	Open in IMG/M
3300026089\|Ga0207648_10836601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	858	Open in IMG/M
3300026118\|Ga0207675_100027479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5299	Open in IMG/M
3300027288\|Ga0208525_1021708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	749	Open in IMG/M
3300028379\|Ga0268266_11356287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	687	Open in IMG/M
3300028380\|Ga0268265_12531764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300028715\|Ga0307313_10250990	Not Available	550	Open in IMG/M
3300028717\|Ga0307298_10138502	Not Available	704	Open in IMG/M
3300028755\|Ga0307316_10232932	Not Available	667	Open in IMG/M
3300028768\|Ga0307280_10266494	Not Available	619	Open in IMG/M
3300028778\|Ga0307288_10293851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	645	Open in IMG/M
3300028787\|Ga0307323_10196104	Not Available	729	Open in IMG/M
3300028791\|Ga0307290_10159654	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300028814\|Ga0307302_10690132	Not Available	507	Open in IMG/M
3300028828\|Ga0307312_10168837	All Organisms → cellular organisms → Bacteria → Proteobacteria	1395	Open in IMG/M
3300031226\|Ga0307497_10056365	Not Available	1398	Open in IMG/M
3300031231\|Ga0170824_112228902	All Organisms → cellular organisms → Bacteria → Proteobacteria	1954	Open in IMG/M
3300031446\|Ga0170820_11258270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1173	Open in IMG/M
3300031469\|Ga0170819_16704114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1047	Open in IMG/M
3300031474\|Ga0170818_101607469	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300031908\|Ga0310900_11726342	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300033550\|Ga0247829_11319049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.21%
Host-Associated	Host-Associated	47.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.44%
Plants	Host-Associated → Plants	47.79%
Aquatic	Environmental → Aquatic	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.50%
Roots	Host-Associated → Plants → Roots	1.77%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.24%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02372910	2199352025	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
ICChiseqgaiiDRAFT_18313591	3300000033	Soil	ALGLEIPPSLLARADEVIXMRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPTPTR*
ICChiseqgaiiDRAFT_18313592	3300000033	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFXDPFDERYGAWXXPTPTR*
INPhiseqgaiiFebDRAFT_1050992581	3300000364	Soil	ITLIFGICAAASLVPVHAQDDAXHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALXGDPFDERYGAWETPAPTR*
C688J35102_1206257302	3300002568	Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR*
Ga0063454_1017122081	3300004081	Soil	MRSITLIFGICTAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGMPAPTR*
Ga0066809_100760392	3300005168	Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0070690_1017516121	3300005330	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWATPAPTR*
Ga0070670_1008965062	3300005331	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTLEPTR*
Ga0070661_1007958421	3300005344	Corn Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWRTPPYVALFGDPFDERYGAWETPAPTR*
Ga0070668_1016984411	3300005347	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWRTPPYVALFGDPFDERYGAWETPAPTR*
Ga0070671_1002358412	3300005355	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0070674_1002302602	3300005356	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0070673_1004818772	3300005364	Switchgrass Rhizosphere	MRGMTLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR*
Ga0070710_112638902	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWETPPYVALSDDPFDERYGTWGTPTPTR*
Ga0070701_105988862	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTSNE*
Ga0070694_1016554492	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDNPFDERWSVGNARADEVIE*
Ga0070684_1009717312	3300005535	Corn Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWATPAPTR*
Ga0070672_1013679982	3300005543	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVSLFGDPFDERYGAWETPAPTR*
Ga0070686_1014367481	3300005544	Switchgrass Rhizosphere	MRGVTLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPTPTR*
Ga0070665_1025920831	3300005548	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTP
Ga0070664_1005556472	3300005564	Corn Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTLEPTR*
Ga0070702_1002440802	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR*
Ga0068852_1022382722	3300005616	Corn Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR*
Ga0068861_1001948942	3300005719	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPTPTR*
Ga0066903_1076038112	3300005764	Tropical Forest Soil	MKGITLIFGICAAASLVPVYAEDDAIHRIEGTALSNPHIDIVRVKPIDLMAPAFKLGEGQVDLTRASSLSGPSGIGAAWQTPPYLASYGDPFDERYGAWGTPAPTR*
Ga0068870_104670601	3300005840	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALTQRSPYSGNRHMM
Ga0070717_121431311	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRGITLIFGIYAAASLVAVRAQDDAKHGIEGTAVSNPHIDIARVKPIDPTAPTFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0070716_1003694712	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RPRRRGDRMRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPAPTR*
Ga0068871_1012665761	3300006358	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAW
Ga0074053_118026581	3300006575	Soil	MRGITLIFGICAAASLVSVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0074059_121425382	3300006578	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGA*
Ga0074054_116886672	3300006579	Soil	RGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGRAWQTPPYVALFGDPFDVRYGAWETPAPTR*
Ga0074049_127356891	3300006580	Soil	AAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR*
Ga0074062_129733382	3300006606	Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGA*
Ga0105250_105375992	3300009092	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAMHGIEGTAVSNRHIDISRVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWETPAPTR*
Ga0105247_107382422	3300009101	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPEPTR*
Ga0105247_113687342	3300009101	Switchgrass Rhizosphere	MRSITLIFGICTAASLVPVHAQDDAKHGIEGTAVSNPHIDITRVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR*
Ga0105242_108756152	3300009176	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGRAWQTPPYVALFGDPFDVRYGAWETPAPTR*
Ga0105248_106171992	3300009177	Switchgrass Rhizosphere	MRGMTLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDITRVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0105237_107382782	3300009545	Corn Rhizosphere	MRGMTLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPEPTR*
Ga0126379_125907592	3300010366	Tropical Forest Soil	MKGIMLIFSICAAASLVPVYAKDDAIHRIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTTASSLAGPSGIGGAWQTPPYVPPYGDPFDERYGAWGTPAPTR*
Ga0105239_108417101	3300010375	Corn Rhizosphere	IFGICAAASLVPVHAQDDAIRGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVSLFGDPFDERYGAWETPAPTR*
Ga0105239_114393532	3300010375	Corn Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR*
Ga0134124_105182562	3300010397	Terrestrial Soil	MRGMTLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0134122_113377832	3300010400	Terrestrial Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNRHIDIARVKPIDLTAPVFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR*
Ga0134123_117729981	3300010403	Terrestrial Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPTPTR*
Ga0105246_106581562	3300011119	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGLGGAWQTPPYVALSGDPFDERYGAWGTPEPTR*
Ga0150985_1106640122	3300012212	Avena Fatua Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPEPTR*
Ga0157296_103123962	3300012905	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWRTSPYVALFGDPFDERYGAWETPAPTSNE*
Ga0164303_101936861	3300012957	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDITRVKPIDLTAPAFRLGEGQVDLTRASDLSGPTGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0164301_113005142	3300012960	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVHNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGRAWQTPPYVALFGDPFDERYGAWGMPAPTR*
Ga0164302_103410041	3300012961	Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTKASDLSGPIGIGGAWQTPPYVALFGDPFDERY
Ga0164307_102201222	3300012987	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDITRVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0157374_118221222	3300013296	Miscanthus Rhizosphere	MRGMTLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0157378_115431532	3300013297	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGLGGAWQTPPYVALSGDPFDERYGAWETPAPTR*
Ga0157372_108826092	3300013307	Corn Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWETPAPTR*
Ga0157375_114128162	3300013308	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDITRVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWATPAPTR*
Ga0157375_123539512	3300013308	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWRTPPYVALFGDPFDERYGAWETPAPTR*
Ga0163163_104368582	3300014325	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPAPTR*
Ga0157380_102173622	3300014326	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTALAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTLEPTR*
Ga0157377_117644141	3300014745	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPAPTR*
Ga0157379_108741052	3300014968	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDGAKHGIEGTAVSNPHIDIARVKPIDLAAPAFRLGEGQVVLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPTPTR*
Ga0157379_108741053	3300014968	Switchgrass Rhizosphere	GICAAASLVPVHAQDVARHGIEETAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR*
Ga0157376_122030112	3300014969	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWRTQPYVALFGDPFDERYGAWETPAPTR*
Ga0132258_113320092	3300015371	Arabidopsis Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTLEPTR*
Ga0132255_1019760902	3300015374	Arabidopsis Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGA*
Ga0182041_112518532	3300016294	Soil	VKGITLIFGICATASLVPVYAEDDAIHRIEGTALSNPRIDIVRVKPIDLTAPAFKLGEGQVDLTRASSLSGPSGIGGAWQTPPYVAPYGDPFDERYGAWGTPAPTR
Ga0190266_105931122	3300017965	Soil	MRDITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPAPTR
Ga0190270_126770762	3300018469	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFGLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPEPTR
Ga0190274_123421392	3300018476	Soil	MRDITLIFGICAAASLVPVHAQDDAIHGIGGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGSWQTPPYVAVSGDPFDERYGAWGTPAPTR
Ga0210380_103517032	3300021082	Groundwater Sediment	MRSITLIFGICTAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPAPTR
Ga0126371_117554472	3300021560	Tropical Forest Soil	MKGIMLIFSICAAASLVPVYAKDDAIHRIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTTASSLAGPSGIGGAWQTPPYVPPYGDPFDERYGAWGTPAATR
Ga0222622_114078252	3300022756	Groundwater Sediment	MRSITLIFGICTAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR
Ga0207692_110442111	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NPSHAARPRRRGDRVRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPPPTR
Ga0207710_103355542	3300025900	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIAGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR
Ga0207680_104560662	3300025903	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEDQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTLEPTR
Ga0207647_103101392	3300025904	Corn Rhizosphere	MRGITFIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTLEPTR
Ga0207693_103274462	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR
Ga0207657_114067202	3300025919	Corn Rhizosphere	MRGMTLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGPGRAWQTPPYVALFGDPFDERYGAWGTPAPTR
Ga0207681_106093792	3300025923	Switchgrass Rhizosphere	MRGITLIFGICATASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWRTPPYVALFGDPFDERYGAWETPAPTR
Ga0207687_113381962	3300025927	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWRTPPYVALFGDPFDERYGAWETPAPTR
Ga0207709_106265352	3300025935	Miscanthus Rhizosphere	MRGITLIFGICTAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR
Ga0207670_115827412	3300025936	Switchgrass Rhizosphere	MRGITLIFGICAAASLVSVHAQDDAKHEIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR
Ga0207669_103875422	3300025937	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNSHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPAPTR
Ga0207704_112773172	3300025938	Miscanthus Rhizosphere	MRSITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR
Ga0207711_110990482	3300025941	Switchgrass Rhizosphere	MRGMTLIFGICAAASLVPVHAQDDAIHGIAGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR
Ga0207689_103723101	3300025942	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIAGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR
Ga0207661_116515652	3300025944	Corn Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR
Ga0207679_109428221	3300025945	Corn Rhizosphere	RPRRRGDRMRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTLEPTR
Ga0207712_111199201	3300025961	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDITRVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWGTPAPTR
Ga0207641_103857452	3300026088	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLARASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTLEPTR
Ga0207648_108366012	3300026089	Miscanthus Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
Ga0207675_1000274792	3300026118	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPTPTR
Ga0208525_10217082	3300027288	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGRAWQTPPYVALFGDPFDVRYGAWETPAPTR
Ga0268266_113562872	3300028379	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGDPFDERYGAWGTPAPTR
Ga0268265_125317642	3300028380	Switchgrass Rhizosphere	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDITRVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWRTPPYVALFGDPFDERYGAWETPAPTR
Ga0307313_102509901	3300028715	Soil	VAARYRRRGDRMRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
Ga0307298_101385021	3300028717	Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPLDLTALAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGT
Ga0307316_102329322	3300028755	Soil	GDRMRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
Ga0307280_102664941	3300028768	Soil	IFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
Ga0307288_102938512	3300028778	Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSGD
Ga0307323_101961042	3300028787	Soil	CAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
Ga0307290_101596541	3300028791	Soil	MRDITLIFGICAAASLVPVHAEDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR
Ga0307302_106901322	3300028814	Soil	MRGITLIFGICAAASLVPVHAEDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWET
Ga0307312_101688372	3300028828	Soil	MRSITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR
Ga0307497_100563651	3300031226	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALSDDPFDERYGAWATPAPTR
Ga0170824_1122289022	3300031231	Forest Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR
Ga0170820_112582702	3300031446	Forest Soil	MRGITLIFGICAAASLVPVHAQDDAIHGIEGTAVSNPHIDIARVKPIDLTAPTFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR
Ga0170819_167041141	3300031469	Forest Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGLGGAWQTPPYVALSGDPFD
Ga0170818_1016074692	3300031474	Forest Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPTFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWETPAPTR
Ga0310900_117263422	3300031908	Soil	MRGITLIFGICAAASLVPVHAQDDAKHGIEGTAVSNPHIDIARVKPIDLTAPAFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVAHFGDPFD
Ga0247829_113190492	3300033550	Soil	MRGITLIFGICAAASLVPVHAQDDAIHRIEGTAVSNPHIDIARVKPIDLTAPPFRLGEGQVDLTRASDLSGPIGIGGAWQTPPYVALFGDPFDERYGAWGTPAPTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083158

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences