Metagenome / Metatranscriptome Family F083154

Basic Information
Family ID	F083154
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	42 residues
Representative Sequence	DVNSDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDITLEGK
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	93.81 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (85.841 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.850 % of family members)
Environment Ontology (ENVO)	Unclassified (21.239 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 37.14% Coil/Unstructured: 62.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01964	ThiC_Rad_SAM	10.62
PF01734	Patatin	7.08
PF05649	Peptidase_M13_N	5.31
PF01850	PIN	4.42
PF01904	DUF72	3.54
PF04014	MazE_antitoxin	3.54
PF02604	PhdYeFM_antitox	2.65
PF01431	Peptidase_M13	2.65
PF02518	HATPase_c	2.65
PF13229	Beta_helix	1.77
PF02687	FtsX	1.77
PF12704	MacB_PCD	1.77
PF05016	ParE_toxin	1.77
PF13205	Big_5	0.88
PF00326	Peptidase_S9	0.88
PF01987	AIM24	0.88
PF13596	PAS_10	0.88
PF01914	MarC	0.88
PF10282	Lactonase	0.88
PF01726	LexA_DNA_bind	0.88
PF07731	Cu-oxidase_2	0.88
PF08242	Methyltransf_12	0.88
PF05163	DinB	0.88
PF00135	COesterase	0.88
PF00909	Ammonium_transp	0.88
PF11937	DUF3455	0.88
PF03551	PadR	0.88
PF13426	PAS_9	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	10.62
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	7.96
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	7.08
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	7.08
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	7.08
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	3.54
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	2.65
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	2.65
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.88
COG2013	AIM24 protein, required for mitochondrial respiration	Energy production and conversion [C]	0.88
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.88
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.88
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.88
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.88
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.88
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.84 %
Unclassified	root	N/A	13.27 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	53.98 %
Unclassified	root	N/A	13.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.08 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.01 %
Unclassified	root	N/A	13.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.88 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.88 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.88 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.88 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.88 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.01 %
Unclassified	root	N/A	13.27 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11962962	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1003190	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300001356\|JGI12269J14319_10247850	Not Available	666	Open in IMG/M
3300001593\|JGI12635J15846_10076179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2466	Open in IMG/M
3300002245\|JGIcombinedJ26739_101764338	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300004080\|Ga0062385_10759338	Not Available	631	Open in IMG/M
3300004152\|Ga0062386_100960304	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300004635\|Ga0062388_102187364	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300005174\|Ga0066680_10671355	Not Available	640	Open in IMG/M
3300005434\|Ga0070709_11541109	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300005435\|Ga0070714_100293413	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300005435\|Ga0070714_101042394	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005526\|Ga0073909_10687846	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300005538\|Ga0070731_10736132	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300005541\|Ga0070733_10300123	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300005542\|Ga0070732_10577274	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005557\|Ga0066704_10682420	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300005614\|Ga0068856_101923059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005764\|Ga0066903_108065530	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300005994\|Ga0066789_10304586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300005994\|Ga0066789_10323512	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300006028\|Ga0070717_10280600	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300006052\|Ga0075029_100536327	Not Available	776	Open in IMG/M
3300006102\|Ga0075015_100001548	All Organisms → cellular organisms → Bacteria	8812	Open in IMG/M
3300006162\|Ga0075030_100399072	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300006173\|Ga0070716_100446942	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300006642\|Ga0075521_10214690	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300009012\|Ga0066710_100351290	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300010048\|Ga0126373_11158637	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300010048\|Ga0126373_12266276	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300010159\|Ga0099796_10240499	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300010321\|Ga0134067_10308717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300010361\|Ga0126378_11576590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300010376\|Ga0126381_100806302	Not Available	1348	Open in IMG/M
3300011270\|Ga0137391_11206696	Not Available	604	Open in IMG/M
3300012189\|Ga0137388_10357435	All Organisms → cellular organisms → Bacteria → Proteobacteria	1348	Open in IMG/M
3300012212\|Ga0150985_117943034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300012363\|Ga0137390_10449157	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1265	Open in IMG/M
3300012683\|Ga0137398_11156799	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300012925\|Ga0137419_10634104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300012971\|Ga0126369_11432099	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300014167\|Ga0181528_10093547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1637	Open in IMG/M
3300014168\|Ga0181534_10209603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300014201\|Ga0181537_11226729	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300014658\|Ga0181519_10155915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300015241\|Ga0137418_10279378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300017943\|Ga0187819_10677276	Not Available	582	Open in IMG/M
3300018034\|Ga0187863_10145855	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300018034\|Ga0187863_10624631	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300018038\|Ga0187855_10113780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1628	Open in IMG/M
3300018086\|Ga0187769_10842058	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300018090\|Ga0187770_11673362	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300019278\|Ga0187800_1670153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	585	Open in IMG/M
3300021402\|Ga0210385_10201242	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300021403\|Ga0210397_10876553	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300021405\|Ga0210387_10166636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1896	Open in IMG/M
3300021420\|Ga0210394_11301832	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300021432\|Ga0210384_10384072	Not Available	1265	Open in IMG/M
3300021474\|Ga0210390_10213247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1634	Open in IMG/M
3300021478\|Ga0210402_11113876	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300021479\|Ga0210410_10318012	All Organisms → cellular organisms → Bacteria → Acidobacteria	1397	Open in IMG/M
3300022504\|Ga0242642_1030395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300024271\|Ga0224564_1007012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1816	Open in IMG/M
3300025414\|Ga0208935_1028676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300025434\|Ga0208690_1018562	All Organisms → cellular organisms → Bacteria → Acidobacteria	1229	Open in IMG/M
3300025906\|Ga0207699_10132534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300025915\|Ga0207693_10393998	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300025929\|Ga0207664_10074140	All Organisms → cellular organisms → Bacteria → Acidobacteria	2748	Open in IMG/M
3300025939\|Ga0207665_10090334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2122	Open in IMG/M
3300025939\|Ga0207665_11552867	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300026330\|Ga0209473_1097749	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300026532\|Ga0209160_1111753	Not Available	1361	Open in IMG/M
3300027610\|Ga0209528_1128520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300027869\|Ga0209579_10644924	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300027895\|Ga0209624_10094242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1950	Open in IMG/M
3300028023\|Ga0265357_1022898	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300028536\|Ga0137415_10548722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300028666\|Ga0265336_10228066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300028747\|Ga0302219_10025048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2227	Open in IMG/M
3300028800\|Ga0265338_10425574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300028906\|Ga0308309_10041756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3242	Open in IMG/M
3300028906\|Ga0308309_11576481	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300029903\|Ga0247271_100279	All Organisms → cellular organisms → Bacteria	14626	Open in IMG/M
3300029999\|Ga0311339_11599180	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300030503\|Ga0311370_10326283	Not Available	1970	Open in IMG/M
3300030509\|Ga0302183_10032458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2109	Open in IMG/M
3300030760\|Ga0265762_1004583	All Organisms → cellular organisms → Bacteria → Acidobacteria	2472	Open in IMG/M
3300031122\|Ga0170822_11111990	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300031233\|Ga0302307_10255458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300031234\|Ga0302325_12420298	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300031234\|Ga0302325_12639363	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031241\|Ga0265325_10480176	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300031525\|Ga0302326_10270671	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300031525\|Ga0302326_12163126	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300031708\|Ga0310686_100834628	Not Available	1033	Open in IMG/M
3300031708\|Ga0310686_109550339	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300031715\|Ga0307476_10437582	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300031720\|Ga0307469_10607597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	978	Open in IMG/M
3300031753\|Ga0307477_10612895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300031823\|Ga0307478_10936422	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300031823\|Ga0307478_11139897	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300031912\|Ga0306921_10221088	All Organisms → cellular organisms → Bacteria	2219	Open in IMG/M
3300031996\|Ga0308176_10364085	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300032059\|Ga0318533_10500884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300032174\|Ga0307470_10106640	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300032205\|Ga0307472_100566703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300032805\|Ga0335078_10361206	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300032828\|Ga0335080_12295771	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300032893\|Ga0335069_11451018	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.81%
Host-Associated	Host-Associated	6.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.65%
Aquatic	Environmental → Aquatic	14.16%
Plants	Host-Associated → Plants	6.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.68%
Freshwater	Environmental → Aquatic → Freshwater	11.50%
Peat	Environmental → Terrestrial → Peat	7.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%
Sediment	Environmental → Aquatic → Sediment	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.79%
Loam	Environmental → Terrestrial → Soil → Loam	15.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083154

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_119629622	3300000789	Soil	DVNSDGYGETRGWLGKTLKYRGGGKYELRAHVGVGDIKLEEK*
AP72_2010_repI_A001DRAFT_10031903	3300000893	Forest Soil	TSYGQTSGWLGKTLKYHGDGKYELRAHVGVGDIKVDGD*
JGI12269J14319_102478502	3300001356	Peatlands Soil	GDGYGETSGWLGKSLKYRGEGKYELRAHVGVGDINLEGK*
JGI12635J15846_100761791	3300001593	Forest Soil	ASTGIGDVNSDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDIRLEGN*
JGIcombinedJ26739_1017643382	3300002245	Forest Soil	GDVNSDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDIRLGGN*
Ga0062385_107593383	3300004080	Bog Forest Soil	VNSSTGDVSEGFLGKTLKYYGDGKYELRAHVSVGDITLEGK*
Ga0062386_1009603042	3300004152	Bog Forest Soil	RASTGIGDVNGSGYGETSGWLGKTLNYHGDGKYELRAHVGVGDITLE*
Ga0062388_1021873641	3300004635	Bog Forest Soil	TSTGDVSAGLLGKTLEYRGDGKYQLRAHVSVGDITLDEK*
Ga0066680_106713552	3300005174	Soil	IGDVNSNGYGETSGWLGKTLKYHGDGKYELRAHVSVGDITLEGR*
Ga0070709_115411092	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GDGYGETSGWLGKTLKYRGEGKYELRARVGVGDISLEGK*
Ga0070714_1002934131	3300005435	Agricultural Soil	NASSGIGDVHGAHYGETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGR*
Ga0070714_1010423942	3300005435	Agricultural Soil	GIGDVNGDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGK*
Ga0073909_106878461	3300005526	Surface Soil	YGETSGWLGKKLKYHGEGKYELRAHVGVGDIHLDGK*
Ga0070731_107361321	3300005538	Surface Soil	DGYGSTSGWLGKTLKYHGDGKYELRAHVGVGDIKLEGQ*
Ga0070733_103001231	3300005541	Surface Soil	NGDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDINLEGK*
Ga0070732_105772742	3300005542	Surface Soil	YGETSGWLGKSLKYHGEGKYELRAHVGIGDIKLGRK*
Ga0066704_106824201	3300005557	Soil	DVNGNSYGETSGWLGKTLKYHGDGKYELRAHVSVGDITLEGK*
Ga0068856_1019230591	3300005614	Corn Rhizosphere	SYGQTSGWLGKTLKYHGNGKYELRAHVGVGDIRVEGD*
Ga0066903_1080655302	3300005764	Tropical Forest Soil	GDVHSDGYGSTSGWLGKTLKYHGEGKYELRAHVGVGDIKLGGQ*
Ga0066789_103045862	3300005994	Soil	GIGDVHGDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDIHLDGK*
Ga0066789_103235121	3300005994	Soil	ETSGWLGKTLKYRGEGKYELRAHVGVGDINLEGK*
Ga0070717_102806002	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SAGIGDVNGDGYGETSGWLGKTLKFHGDGKYELRAHVGVGDINLEGK*
Ga0075029_1005363271	3300006052	Watersheds	VDGDGYGETSGWLGKSLKYHGDGKYELRAHVGVGDIHLEGK*
Ga0075015_1000015489	3300006102	Watersheds	NGDGFGETSGWLGKTLKYRGEGKYELRAHVGVGDISLEGK*
Ga0075030_1003990721	3300006162	Watersheds	GDVNSDGYGETRGWLGKTLKYHGDGKYELRAHVGVGDIKLEGR*
Ga0070716_1004469422	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	QTSGWLGKTLKYRGDGKYELHAHVGVGDIRVEGD*
Ga0075521_102146902	3300006642	Arctic Peat Soil	SGEGYGETSGWLGKTLKYHGDGKYELRAHVGVGDIHLEGK*
Ga0066710_1003512903	3300009012	Grasslands Soil	HASTSIGDVNSNGYGETSGWLGKTLKYHGDGKYELRAHVSVGDITLEGR
Ga0126373_111586371	3300010048	Tropical Forest Soil	ASTGVGDVSSDGYGETHGWLGKTLKYHGDGKYELRAHVGVGDIRLEGN*
Ga0126373_122662761	3300010048	Tropical Forest Soil	DGYGSTSGWLGKTLKYHGDGKYELRAHVGVGDIKLGGQ*
Ga0099796_102404991	3300010159	Vadose Zone Soil	DVNGNGYGETSGWLGKTLKYHGDGKYELRAHVSVGDITLERK*
Ga0134067_103087172	3300010321	Grasslands Soil	ASTGIGDVNSDGYGETSGWLGKTLKYHGDGKYEMRAHVGVGDIKLEGQ*
Ga0074045_100177361	3300010341	Bog Forest Soil	RASTSIGDVNASGDYGEAGGWLGKTLKYSGDGKYELRAHVSIGDINLDQK*
Ga0126378_115765902	3300010361	Tropical Forest Soil	TGIGDVNSDGYGETHGWLGKTLKYQGDGKYELRAHVGVGDIKLEGR*
Ga0126381_1008063021	3300010376	Tropical Forest Soil	NSGGYGQTRGWLGKTLKYRGDGKYELRAHVGVGDIRLEGK*
Ga0137391_112066962	3300011270	Vadose Zone Soil	GYGETSGWLGKTLKYHGDGKYELRAHVSVGDITLEEK*
Ga0137388_103574351	3300012189	Vadose Zone Soil	GIGDVNSDGYGETSGWLGKTLNYHGDGKYELHAHVGVGDITLEGK*
Ga0150985_1179430341	3300012212	Avena Fatua Rhizosphere	ASAGIGDVSGAGYGETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGR*
Ga0137390_104491572	3300012363	Vadose Zone Soil	ETSGWLGKTLKYHGDGKYELRAHVSVGDITLEEK*
Ga0150984_1009719852	3300012469	Avena Fatua Rhizosphere	VHASAGIGDVSGAGYGETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGR*
Ga0137398_111567991	3300012683	Vadose Zone Soil	IGDVNGDGYGETSGWLGKTLKSSGDGKYELRAHVGVGDITLEGK*
Ga0137419_106341041	3300012925	Vadose Zone Soil	DVNGNGYGETSGFLGKTLKYHGDGKYELRAHVGVGDITLEDK*
Ga0126369_114320992	3300012971	Tropical Forest Soil	YGSTSGWLGKTLKYHGDGKYELRAHVGVGDIKLGGQ*
Ga0181528_100935474	3300014167	Bog	GDTSGWLGKTLKYRGDGKYELRAHVGVGDISLEGK*
Ga0181534_102096033	3300014168	Bog	VSASTGIGDVDGDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDVHLE*
Ga0181537_112267291	3300014201	Bog	ASTSIGDVNGDGYGEVSGWLGKTLKYHGDGKYELHAHVGVGDINLEGK*
Ga0181519_101559152	3300014658	Bog	DVHGGDYGESSGWLGKSLKYRGDGKYELRAHVGVGDIRLDGD*
Ga0137418_102793783	3300015241	Vadose Zone Soil	STSIGDVNGNGYGETSGWLGKTLKYHGEGKYELRAHVSVGDITLEEK*
Ga0187819_106772762	3300017943	Freshwater Sediment	DVNSDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDITLEGK
Ga0187863_101458551	3300018034	Peatland	GYGETSGWLGKSLKYRGDGRYELRAHVGVGDIHLDGD
Ga0187863_106246312	3300018034	Peatland	GYGETSGWLGKTLKYRGEGKYELRAHVGVGDIHLEGK
Ga0187855_101137804	3300018038	Peatland	VNSDGYDGETKGWLGKTLKYHGDGKYELRAHVGVGDIRLEGK
Ga0187769_108420581	3300018086	Tropical Peatland	DVNSDGYGETSGWLGKTLRYRGEGKYELRAHVGVGDITLEGK
Ga0187770_116733622	3300018090	Tropical Peatland	DSDGYGETSGWLGKTLRYHGDGKYELRAHVGVGDITLEGK
Ga0187800_16701531	3300019278	Peatland	GDVNSDGYGETSGWLGKTLRYHGDGKYELRAHVGVGDITLEGK
Ga0210385_102012422	3300021402	Soil	VNADVTGEVSGWLGKTLKYRGDGKYELRAHVGVGDITLEGK
Ga0210397_108765531	3300021403	Soil	STGIGDVHGPGYGETKGWLGKTVKYKGDGKYELRAHVGVGDIHLDN
Ga0210387_101666361	3300021405	Soil	GYGETSGWLGKTLKYHGDDGKYELRAHVGIGDIRLEGK
Ga0210394_113018322	3300021420	Soil	VHGEGYGETSGWLGKTLKYHGDGKYELRAHVGVGDIHLERK
Ga0210384_103840721	3300021432	Soil	NGDGYGETSGWLGKTLKYHGDGKYELHAHVGVGDITLEGK
Ga0210390_102132473	3300021474	Soil	TGIGDVHGDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDIHLDGK
Ga0210402_111138761	3300021478	Soil	STSIGDVSGGDGYGETSGWLGKTLKYHGDGKYELHAHVGVGDISLEGK
Ga0210410_103180123	3300021479	Soil	IGDVNSDGYGETRGWLGKTLKYRGEGKYELRAHVGVGDIRVEGK
Ga0242642_10303951	3300022504	Soil	SDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDIKLEGQ
Ga0224564_10070123	3300024271	Soil	GDVNGDGYGETSGWLGKTLKYRGDGKYELRAHVGVGDIHLEGK
Ga0208935_10286761	3300025414	Peatland	GIGDVDGDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDVHLE
Ga0208690_10185621	3300025434	Peatland	GDVSAGFLGKTLKYQGDGKYELHAHVSIGDISLEGK
Ga0207699_101325341	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	STGIGDVHGEGYGETSGWLGKKLKYHGEGKYELRAHVGVGDIHLDGK
Ga0207693_103939982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGK
Ga0207664_100741401	3300025929	Agricultural Soil	GDVNGDGYGETSGWLGKTLKFHGDGKYELRAHVGVGDINLEGK
Ga0207665_100903342	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DVHTGYGQTSGWLGKTLKYRGDGKYELHAHVGVGDIRVEGD
Ga0207665_115528672	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	YGETSGWLGKKLKYHGEGKYELRAHVGVGDIHLDGN
Ga0209238_11140011	3300026301	Grasslands Soil	VQASAGIGDVNGDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGK
Ga0209473_10977492	3300026330	Soil	GYGETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGK
Ga0209160_11117531	3300026532	Soil	TSIGDVNSNGYGETSGWLGKTLKYHGDGKYELRAHVSVGDITLEGR
Ga0209529_10663371	3300027334	Forest Soil	LVNASAGIGDVNGDGYGETSGWLGKSLKYHGEGKYEMRAHVGVGDIRLEGK
Ga0209528_11285202	3300027610	Forest Soil	RNFAAGWLGKTLKYHGDGKYELRAQVSVGDINLEGK
Ga0209579_106449241	3300027869	Surface Soil	VNSDGYGSTSGWLGKTLKYHGDGKYELRAHVGVGDIKLEGQ
Ga0209624_100942421	3300027895	Forest Soil	LVRANTRIGDVDGEGYDETKGWLGKTLKYTGDGKYELHAHVGIGDIRLDRN
Ga0265357_10228981	3300028023	Rhizosphere	IGDVNSAGYGETSGWLGKTLKYRGEGKYELRARVGVGDITLNRK
Ga0137415_105487221	3300028536	Vadose Zone Soil	STSIGDVNGNGYGETSGWLGKTLKYHGEGKYELRAHVSVGDITLEEK
Ga0265336_102280662	3300028666	Rhizosphere	GETSGWLGKSLKYHGEGKYELRAHVGVGDIHLDGK
Ga0302219_100250487	3300028747	Palsa	GDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDVHLE
Ga0265338_104255741	3300028800	Rhizosphere	DVNGDGYGETSGWLGKSLKYHGEGKYELRAHVGVGDIHLDGK
Ga0308309_100417561	3300028906	Soil	IGDVNGEGYGETSGWLGKTLKYHGDGKYELRAHVSVGDINLEEK
Ga0308309_115764812	3300028906	Soil	YGETSGWLGKTLKYHGEGKYELRAHVGVGDIRLEGK
Ga0247271_1002797	3300029903	Soil	VSASTGIGDVNADGYGDTSGWLGKTLKYRGDGKYELRAHVGVGDISLEGK
Ga0311339_115991801	3300029999	Palsa	GETSGWLGKTLKYHGDGKYELRAHVGVGDIKLEGK
Ga0311370_103262831	3300030503	Palsa	TGDVSAGLLGKTLKYHGDGKYELRAHVSIGDITLEGK
Ga0302183_100324581	3300030509	Palsa	AGIGDVNSDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDVHLE
Ga0265762_10045833	3300030760	Soil	GETSGWLGKTLKYRGDGKYELRAHVGVGDIHLEGK
Ga0170822_111119901	3300031122	Forest Soil	GYGETSGWLGKTLKYHGEGKYELRAHVGVGDIHLEGK
Ga0302307_102554582	3300031233	Palsa	GDVNGDGYGETSGWLGKTLKYRGDGKYELRAHVGIGDIHLEGK
Ga0302325_124202981	3300031234	Palsa	DGYGETSGWLGKTLKYRGDGKYELRARVGVGDINLEGK
Ga0302325_126393631	3300031234	Palsa	NTRIGDVNGEGYGETSGWLGKTLKYDGPGKYGLRAQVVVGDITVEGK
Ga0265325_104801761	3300031241	Rhizosphere	GNVQSDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDIRLDGK
Ga0302326_102706711	3300031525	Palsa	IGDVDGDGYGETSGWLGKTLKYHGDGKYELRAHVGVGDINLEGK
Ga0302326_121631261	3300031525	Palsa	ASYGEADGWLGKSLHYHGDGKYEMRAHVTVGDIKLEGK
Ga0310686_1008346284	3300031708	Soil	VNTSTGDVSAGFLGKTLKYQGDGKYELHAHVGIGDISLEGK
Ga0310686_1095503393	3300031708	Soil	VNSDGYGDTSGWLGKTLKYNGGGKYELRAHVSIGDVTLEGK
Ga0307476_104375822	3300031715	Hardwood Forest Soil	MRASTGIGDVNGNGYGETSGWLGKTLKYQGDGKYELRAHVGVGDIRLEGK
Ga0307469_106075971	3300031720	Hardwood Forest Soil	SSGIGDVNGEGYGETSGWLGKTLNYRGDGKYELHAHVSIGDINLEGK
Ga0307477_106128952	3300031753	Hardwood Forest Soil	ASAGIGDVNGAGYGETSGWLGKTLKYHGEGKYVLRAHVGVGDIHLDGK
Ga0307478_109364222	3300031823	Hardwood Forest Soil	GETSGWLGKTLKYHGDGQYELRAHVGVGDITLEAK
Ga0307478_111398972	3300031823	Hardwood Forest Soil	NADVTGEVSGWLGKTLKYRGDGKYELRAHVGVGDITLEGK
Ga0306921_102210883	3300031912	Soil	DVNSDGYGETHGWLGKTLKYQGDGKYELRAHVGVGDIKLEGR
Ga0308176_103640851	3300031996	Soil	IGDVNGDGYGETSGWLGKTLKYHGDGKYELRAHVSVGDINLEGK
Ga0318533_105008842	3300032059	Soil	GDVNSDGYGETHGWLGKTLKYQGDGKYELRAHVGVGDIKLEGR
Ga0307470_101066401	3300032174	Hardwood Forest Soil	VNGDGYGETSGWLGKTLKYHGEGKYELRAHVGVGDIHLEGK
Ga0307472_1005667031	3300032205	Hardwood Forest Soil	DGYGETHGWLGKTLKYHGDGKYELRAHVGVGDIKLEGQ
Ga0335078_103612062	3300032805	Soil	GYGETSGWLGKSLKYRGEGKYELRAHVGVGDIHLDGK
Ga0335080_122957711	3300032828	Soil	YGETSGWIGKTLKYRGDGKYQLRAHVGVGDIKFEDR
Ga0335069_114510182	3300032893	Soil	GIGDLNSDGYGESRGWLGKTLKYHGNGKYELRAHVGVGDIKLESH

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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