Metagenome Family F083106

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083106
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	85 residues
Representative Sequence	MKIASLLLAVTILVAPTTLFSNPPQKDVPAEVTTAQGALKGAYNDLQHAGGEWGGHRVKAMQHIQEALTELNEAEKWAREHHDIK
Number of Associated Samples	52
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.06 %
% of genes near scaffold ends (potentially truncated)	34.51 %
% of genes from short scaffolds (< 2000 bps)	69.91 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.416 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (50.443 % of family members)
Environment Ontology (ENVO)	Unclassified (63.717 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.36% β-sheet: 0.00% Coil/Unstructured: 56.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13590	DUF4136	3.54
PF07238	PilZ	3.54
PF00106	adh_short	2.65
PF03916	NrfD	2.65
PF01011	PQQ	2.65
PF13247	Fer4_11	1.77
PF01548	DEDD_Tnp_IS110	1.77
PF02687	FtsX	0.88
PF13419	HAD_2	0.88
PF08241	Methyltransf_11	0.88
PF07274	DUF1440	0.88
PF13480	Acetyltransf_6	0.88
PF07690	MFS_1	0.88
PF06863	DUF1254	0.88
PF01568	Molydop_binding	0.88
PF04185	Phosphoesterase	0.88
PF12867	DinB_2	0.88
PF12704	MacB_PCD	0.88
PF00069	Pkinase	0.88
PF13551	HTH_29	0.88
PF00180	Iso_dh	0.88
PF05163	DinB	0.88
PF01435	Peptidase_M48	0.88
PF01522	Polysacc_deac_1	0.88
PF03781	FGE-sulfatase	0.88
PF13519	VWA_2	0.88
PF13418	Kelch_4	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.54
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.77
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG3477	Uncharacterized membrane protein YagU, involved in acid resistance, DUF1440 family	Function unknown [S]	0.88
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.88
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.42 %
Unclassified	root	N/A	18.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.42 %
Unclassified	root	N/A	18.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.42 %
Unclassified	root	N/A	18.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.83 %
Unclassified	root	N/A	18.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.58 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.58 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.77 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.85 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.77 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.85 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	1.77 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.88 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.88 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.85 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	1.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.88 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.85 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	1.77 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.85 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	1.77 %
Nocardia sp. BMG111209	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10675769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	611	Open in IMG/M
3300004633\|Ga0066395_10954425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	521	Open in IMG/M
3300005533\|Ga0070734_10001289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	37972	Open in IMG/M
3300005764\|Ga0066903_100051480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5022	Open in IMG/M
3300005764\|Ga0066903_100107417	All Organisms → cellular organisms → Bacteria	3806	Open in IMG/M
3300005764\|Ga0066903_100220988	All Organisms → cellular organisms → Bacteria → Acidobacteria	2871	Open in IMG/M
3300005764\|Ga0066903_104255437	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300005764\|Ga0066903_106927124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. BMG111209	588	Open in IMG/M
3300006028\|Ga0070717_10115047	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300006028\|Ga0070717_10628855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300006173\|Ga0070716_101845216	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300006175\|Ga0070712_100528701	All Organisms → cellular organisms → Bacteria → Acidobacteria	991	Open in IMG/M
3300009792\|Ga0126374_10684366	Not Available	769	Open in IMG/M
3300009826\|Ga0123355_10002638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25469	Open in IMG/M
3300010043\|Ga0126380_10675765	Not Available	826	Open in IMG/M
3300010046\|Ga0126384_11775214	Not Available	585	Open in IMG/M
3300010048\|Ga0126373_10000060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	96021	Open in IMG/M
3300010048\|Ga0126373_10031265	All Organisms → cellular organisms → Bacteria	4605	Open in IMG/M
3300010048\|Ga0126373_10117163	All Organisms → cellular organisms → Bacteria → Acidobacteria	2486	Open in IMG/M
3300010048\|Ga0126373_10163448	All Organisms → cellular organisms → Bacteria → Acidobacteria	2128	Open in IMG/M
3300010048\|Ga0126373_10178281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2043	Open in IMG/M
3300010048\|Ga0126373_10210149	All Organisms → cellular organisms → Bacteria → Acidobacteria	1892	Open in IMG/M
3300010048\|Ga0126373_10287816	All Organisms → cellular organisms → Bacteria → Acidobacteria	1633	Open in IMG/M
3300010048\|Ga0126373_10498776	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300010048\|Ga0126373_10549259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300010048\|Ga0126373_10819183	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300010048\|Ga0126373_11265512	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300010048\|Ga0126373_11502796	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300010048\|Ga0126373_11539649	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300010048\|Ga0126373_11676026	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010358\|Ga0126370_11894802	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300010360\|Ga0126372_10086626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2301	Open in IMG/M
3300010360\|Ga0126372_10100901	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300010360\|Ga0126372_11734767	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300010361\|Ga0126378_10787554	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300010361\|Ga0126378_11517955	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300010376\|Ga0126381_100094143	Not Available	3808	Open in IMG/M
3300010376\|Ga0126381_100139336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3168	Open in IMG/M
3300010376\|Ga0126381_100496442	All Organisms → cellular organisms → Bacteria → Acidobacteria	1721	Open in IMG/M
3300010376\|Ga0126381_100591275	All Organisms → cellular organisms → Bacteria → Acidobacteria	1578	Open in IMG/M
3300010376\|Ga0126381_100787621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1364	Open in IMG/M
3300010376\|Ga0126381_101034687	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300010376\|Ga0126381_101996629	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300010376\|Ga0126381_102670850	Not Available	714	Open in IMG/M
3300010376\|Ga0126381_104839042	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300010398\|Ga0126383_10307844	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300010398\|Ga0126383_12262877	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300010398\|Ga0126383_12380938	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300010398\|Ga0126383_13397218	Not Available	520	Open in IMG/M
3300010937\|Ga0137776_1217446	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300012918\|Ga0137396_10578361	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300012925\|Ga0137419_10614424	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300012948\|Ga0126375_10256812	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300012948\|Ga0126375_10351381	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300012971\|Ga0126369_10367655	All Organisms → cellular organisms → Bacteria → Acidobacteria	1466	Open in IMG/M
3300012971\|Ga0126369_10473108	All Organisms → cellular organisms → Bacteria → Acidobacteria	1306	Open in IMG/M
3300016270\|Ga0182036_10365738	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300016319\|Ga0182033_10161064	Not Available	1745	Open in IMG/M
3300016319\|Ga0182033_11470542	Not Available	614	Open in IMG/M
3300016371\|Ga0182034_10101677	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300016404\|Ga0182037_11348247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300017959\|Ga0187779_10463209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300017959\|Ga0187779_10608991	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300021476\|Ga0187846_10064750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300021559\|Ga0210409_10001971	All Organisms → cellular organisms → Bacteria	25493	Open in IMG/M
3300021560\|Ga0126371_10000437	All Organisms → cellular organisms → Bacteria	34036	Open in IMG/M
3300021560\|Ga0126371_10013700	All Organisms → cellular organisms → Bacteria	7368	Open in IMG/M
3300021560\|Ga0126371_10026476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5395	Open in IMG/M
3300021560\|Ga0126371_10044691	All Organisms → cellular organisms → Bacteria → Acidobacteria	4216	Open in IMG/M
3300021560\|Ga0126371_10053506	All Organisms → cellular organisms → Bacteria → Acidobacteria	3871	Open in IMG/M
3300021560\|Ga0126371_10217094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2015	Open in IMG/M
3300021560\|Ga0126371_10307582	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300021560\|Ga0126371_10362424	Not Available	1586	Open in IMG/M
3300021560\|Ga0126371_10511284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300021560\|Ga0126371_10522302	Not Available	1336	Open in IMG/M
3300021560\|Ga0126371_11245491	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300021560\|Ga0126371_12067125	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300021560\|Ga0126371_12883247	Not Available	583	Open in IMG/M
3300021560\|Ga0126371_13301857	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300027826\|Ga0209060_10005980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8513	Open in IMG/M
3300027842\|Ga0209580_10431976	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300027874\|Ga0209465_10030930	All Organisms → cellular organisms → Bacteria → Acidobacteria	2519	Open in IMG/M
3300027874\|Ga0209465_10287428	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300028536\|Ga0137415_10074335	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300031057\|Ga0170834_106772862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3147	Open in IMG/M
3300031231\|Ga0170824_118748242	All Organisms → cellular organisms → Bacteria → Acidobacteria	2596	Open in IMG/M
3300031474\|Ga0170818_100551377	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300031545\|Ga0318541_10606982	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300031546\|Ga0318538_10332529	Not Available	820	Open in IMG/M
3300031546\|Ga0318538_10635346	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300031573\|Ga0310915_10723214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300031573\|Ga0310915_11114062	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300031720\|Ga0307469_10637828	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300031720\|Ga0307469_10994803	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300031744\|Ga0306918_10751813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	762	Open in IMG/M
3300031820\|Ga0307473_10507528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300031879\|Ga0306919_10725282	Not Available	765	Open in IMG/M
3300031879\|Ga0306919_11500024	Not Available	508	Open in IMG/M
3300031942\|Ga0310916_10250569	Not Available	1492	Open in IMG/M
3300031945\|Ga0310913_10148287	All Organisms → cellular organisms → Bacteria → Acidobacteria	1620	Open in IMG/M
3300031945\|Ga0310913_10755094	Not Available	687	Open in IMG/M
3300031954\|Ga0306926_12226936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300031954\|Ga0306926_12911856	Not Available	514	Open in IMG/M
3300032180\|Ga0307471_100287856	All Organisms → cellular organisms → Bacteria → Acidobacteria	1722	Open in IMG/M
3300032180\|Ga0307471_100786654	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300032261\|Ga0306920_101049135	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300032770\|Ga0335085_10000743	All Organisms → cellular organisms → Bacteria	83944	Open in IMG/M
3300032782\|Ga0335082_10185954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1984	Open in IMG/M
3300032829\|Ga0335070_10127776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.23%
Aquatic	Environmental → Aquatic	0.89%
Arthropoda	Host-Associated → Arthropoda	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Cave	Environmental → Terrestrial → Cave	0.89%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.53%
Loam	Environmental → Terrestrial → Soil → Loam	12.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	50.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.77%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.89%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_106757691	3300004633	Tropical Forest Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEIDSARTSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHHDVK*
Ga0066395_109544251	3300004633	Tropical Forest Soil	MKIATLLLAAITLVAPATLFPQPPQKDVPAEIDAARSSLKQASSDLGKAGGEWGGHRQKAIEHIQQAVSELNQAEQWAKAHHDIK*
Ga0066388_1067310062	3300005332	Tropical Forest Soil	FLQGRLTLRNRVALGTIADCEHFESAPLSEEQMKISTLVLAATILVPTATLFPRSPQHDVPAEVESARTALKGAYNDLQHAGGEWGGHRANAMNHIQEALRELNEAEKWAKEHHDVK*
Ga0070734_100012899	3300005533	Surface Soil	MKIAKLVLAVAILVPTAPLFSRPPQDVPAEVNSAREALKGAHHDLEHAGGTWGGHRVKAMEHIQAAIAELNEAENWAKTHHDIK*
Ga0066903_1000514805	3300005764	Tropical Forest Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEVDAARNSLKQSLSDLEKAGGEWGGHRQKAMQHIQQALGELNQAEQWAKAHHEVK*
Ga0066903_1001074175	3300005764	Tropical Forest Soil	MKIATVVLAATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQHAGGEWGGHRVNAMKHIQEAVAELNEAETWAKQHHDVK*
Ga0066903_1002209883	3300005764	Tropical Forest Soil	MKIAKLVLAITILVPTAPVFSLPPQGDVPAEVNTARGALKGAYNDLQHAGGEWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDIK*
Ga0066903_1042554372	3300005764	Tropical Forest Soil	MKIATVVLAATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQHAGGEWGGHRVSAMKHIQEAMAELNEAENWAKQHHDMK*
Ga0066903_1069271241	3300005764	Tropical Forest Soil	MKIATLVLAATVLVPTTLFPRSPQRDVPPEVESARTALKGAYNDLQHAGGEWGGHRVNAMNHIQEAVKELNEAEKWAKEHHDIK*
Ga0070717_101150472	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKIATLLLAAITLVAPATLFPQPPQKDVPAEIDSARNSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHHDVK*
Ga0070717_106288551	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SSGQIVVGLKKSSNSGPLRTVYGGHMKFVPLLLALTILVAPATLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRVKAMQHIQEAIAELNEAEKWAREHHEIK*
Ga0070716_1018452161	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LLALTILVAPATLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRVKAMQHIQEAIAELNEAEKWAREHHEIK*
Ga0070712_1005287011	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKFVPLLLALTILVAPATLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRVKAMQHIQEAIAELNEAEKWAREHHEIK*
Ga0126374_106843661	3300009792	Tropical Forest Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEVDAARNSLKQSLGDLEKAGGEWGGHRQKAMQHIQEALGELNQAEQWAKAHHEIK*
Ga0123355_100026385	3300009826	Termite Gut	MKIASLLLAATILLSPANLFPQGPRRDVPAEVDSARNALKGAYQDLQHAGGEWGGYRAKAMEHIQQAITDLNEAERFAREHKEIR*
Ga0126380_106757652	3300010043	Tropical Forest Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEVDAARNSLKQAHSDLEKAGGEWGGHRQKAMQHIQEALGELNQAEQWAKAHHEIK*
Ga0126384_117752141	3300010046	Tropical Forest Soil	MKIATLLLAVITLVAPTALFPQPPQKDVPAEVDSARTSLKQSLSDLEKAGGEWGGHRQKAMQHIQQALGELNQAEQWAKAHHEVK*
Ga0126373_1000006077	3300010048	Tropical Forest Soil	MKIATLLLAAITLVAPATLFPQPPQKDVPAEIDAARSSLKQASSDLGKAGGERGGHRQKAIEHIQQAVSELNQAEQWAKAHHDIK*
Ga0126373_100312654	3300010048	Tropical Forest Soil	MKIATLVLAATILVPTASLFPRPAQRDVPAELESARGALKGALNDLQHAGGQWGGHRANAINHIQEALKELNEAEKFAKEHHDVK*
Ga0126373_101171632	3300010048	Tropical Forest Soil	GQMKIAKLVLAATILVPTALFSRPPQRDVPVEVNSARTALKGAYNDLEHAGGEWGGHRVTAMRHIQEAIAELNEAETWAKQHHDIK*
Ga0126373_101634482	3300010048	Tropical Forest Soil	MKIATRLLAAAILVAPATLAIPQKDVPAEVTAAQSALKGAYDDLEHAGGEWGGHRVKAMDHIKEALAELNEAEKWAREHHDVK*
Ga0126373_101782814	3300010048	Tropical Forest Soil	MKIATLLLAALLFPTATLLSQPPQKDVPAEVDSARNSLKGALNDLQHAGGEWGGHRAKAMQHIQEALSELNQAEKFAKEHHDIK*
Ga0126373_102101491	3300010048	Tropical Forest Soil	PLLEDLVKIATLLFAVTILFAPATLFSNPPQKDVPAEVTSAQSALKGAYNDLEHAGGEWGGHRVKAMQHIQEAQAELKEAENWAREHHDIK*
Ga0126373_102878163	3300010048	Tropical Forest Soil	MKIATLLLAATILVPSASLFPRAPQRDVPAEVDSARGALKGALSDLQRAGGDWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDIK*
Ga0126373_104987763	3300010048	Tropical Forest Soil	LRDTIITCDCFVTAPLSEDKMKIAALVLAATILLPATSLLSQPPQRDVPAEVDSARSALKGAYNDLQHAGSDWGGHRAKAMDHIQQAITELNE
Ga0126373_105294511	3300010048	Tropical Forest Soil	RAYRRGAQASTIAECEHLNPRHFSEGKMKIATLVLAATVLVPTTLFPRSPQRDVPPEVESARTALKGAYNDLQHAGGEWGGHRVNAMNHIQEAVKELNEAEKWAKEHHDIK*
Ga0126373_105492592	3300010048	Tropical Forest Soil	MKIASLLLAVTILVAPTTLFSNPPQKDVPAEVTTAQGALKGAYNDLQHAGGEWGGHRVKAMQHIQEALTELNEAEKWAREHHDIK*
Ga0126373_108191831	3300010048	Tropical Forest Soil	TLVLAATILVPATLFPRSPQHDVPAEVDSARGALKGAYNDLQHAGGEWGGHRVKAMDHIQAAINELNEAEKWAKEHHDVK*
Ga0126373_112655121	3300010048	Tropical Forest Soil	MKIATLALAATILVPSATMFPRSPQRDVPAEVDSARGALKGAYNDLQHAGGEWGGHRVKAMDHIQAAINELNEAEKWAKEHHDAK*
Ga0126373_115027961	3300010048	Tropical Forest Soil	PLFSLPPQGDVPAEVNSARGALKGAYNDLEHAGGEWGGHRATAMKHIQAAIAELNEAETWAKQHHDIK*
Ga0126373_115396492	3300010048	Tropical Forest Soil	LRRGRQPLRQLLNPHHSSEDKMKIAKLVLAATIFVPTVPLFSLPPQGDVPAEVNTARGALKGAYNDLQHAGGEWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDIK*
Ga0126373_116760261	3300010048	Tropical Forest Soil	ATLFPQPPQKDVPAELDSARNSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHKDVK*
Ga0126370_101106674	3300010358	Tropical Forest Soil	VALGTIADCEHFESAPLSEEQMKISTLVLAATILVPTATLFPRSPQHDVPAEVESARTALKGAYNDLQHAGGEWGGHRANAMNHIQEALRELNEAEKWAKEHHDVK*
Ga0126370_118948021	3300010358	Tropical Forest Soil	MKIAKLVLAATIFVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQHAGGEWGGHRVSAMKHIQEAMAELNEAENWAKQHHDMK*
Ga0126372_100866262	3300010360	Tropical Forest Soil	MKIATLLLAVITLVAPTALFPQPPQKDVPAEVDSARTSLKQSLSDLEKAGGEWGGHRQKAMQHIQQALGELNQAEQWAKAHHEIK*
Ga0126372_101009013	3300010360	Tropical Forest Soil	MKIAHLLLAVTILVAPGTILPQPPQHDVPGEVDSARNALKQAHNDLQHAGGEWGGHRAKALQHIQEAISELNEAEKWAREHHDIK*
Ga0126372_117347671	3300010360	Tropical Forest Soil	LSEEQMKIATLLLAATILVPTASLFPRAPQRDVPAEVDSARGALKGALSDLQRAGGDWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDVK*
Ga0126378_107875542	3300010361	Tropical Forest Soil	MKIAKLVLAATIFVPTVPLFSLPPQGDVPAEVNTARGALKGAYNDLQHAGGEWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDIK*
Ga0126378_115179552	3300010361	Tropical Forest Soil	MKIATLLLAATILVPTASLFPRAPQRDVPAEVDSARGALKGALSDLQRAGGDWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDI
Ga0126381_1000941433	3300010376	Tropical Forest Soil	MRIATLLFAVTILVAPTTLFSNPPQKDVPAEVTSAQSALKGALNNLQHAGGEWGGHKGKAMTHIQEALAELGQAEKWAQEHHDIK*
Ga0126381_1001393365	3300010376	Tropical Forest Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEVDAARNSLKQSLSDLEKAGGEWGGHRQKAMQHIQQALGELNQAEQWAKADHEVK*
Ga0126381_1004964424	3300010376	Tropical Forest Soil	VKIATLLFAVTILFAPATLFSNPPQKDVPAEVTSAQSALKGAYNDLEHAGGEWGGHRVKAMQHIQEAQAELKEAENWAREHHDIK*
Ga0126381_1005912751	3300010376	Tropical Forest Soil	MKIVTLLLAVTILVAPTTLFSNPPQKDVPAEVTSAQSALKGAYNDLEHAGGDWGGHRVQAMTHIQQALSELNAAEKWAREHHEIK*
Ga0126381_1007876211	3300010376	Tropical Forest Soil	LPARPIGGQMKIAHLLLAVTILVAPGTILPQPPQHDVPGEVDSARNALKQAHNDLQHAGGEWGGHRAKALQHIQEAISELNEAEKWAREHHDIK*
Ga0126381_1010346872	3300010376	Tropical Forest Soil	MKIATLALAATILVPSATMFPRSPQRDVPAEVDSARGALKGAYNDLQHAGGEWGGHRAKAMDHIQAAINELNEAEKWAKEHHDVK*
Ga0126381_1019966292	3300010376	Tropical Forest Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEIDSARTSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWA
Ga0126381_1026708501	3300010376	Tropical Forest Soil	MKIATRLLAAAILVAPATLAIPQKDVPAEVTAAQSALKGAYDDLEHAGGEWGGHRVKAMDHIKEALAELNEAEK
Ga0126381_1048390421	3300010376	Tropical Forest Soil	TLLSQPPQKDVPAEVDSARSALKGALNDLQHAGSDWGGHRARAMQHIQEALTELNQAEKFAKEHHDIK*
Ga0126383_103078442	3300010398	Tropical Forest Soil	MKLATLLLAAITLVAPAALFPQPPQKDVPAEVDSARNSLKQAHSDLEKAGGEWGGHRVKAMQHIQEALTELNQAEQWAKSHKDIK*
Ga0126383_122628771	3300010398	Tropical Forest Soil	HFESAPLSEEQMKISTLVLAATILVPTATLFPRSPQHDVPAEVESARTALKGAYNDLQHAGGEWGGHRANAMNHIQEALRELNEAEKWAKEHHDVK*
Ga0126383_123809381	3300010398	Tropical Forest Soil	MKIATVVLAATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYTDLQHAGGEWGGHRVSAMKHIQEAMAELNEAENWAKQHHDMK*
Ga0126383_133972181	3300010398	Tropical Forest Soil	EHFRHLVVLSIPVAPIHGGDMKIATLLLAAITLVAPATLFPQPPQKDVPAEIDAARSSLKQASSDLGKAGGEWGGHRQKAIEHIQQAVSELNQAEQWAKAHHDIK*
Ga0137776_12174461	3300010937	Sediment	MKIATLLLAALLFPTATLLPQPPQKDVPAEVDSARTALKGAFNDLQHAGGEWGGHRQSAMNHIQEALKELNEAEKWAKEHHDVK*
Ga0137396_105783612	3300012918	Vadose Zone Soil	MKIATLVLAATILVPAGTLLPQPLQRDVPAEVDAARNALKGAYNDLQHAGGEWGGHRVNAMNHIQEAIKELNEAEKWAKEHHDIK*
Ga0137419_106144241	3300012925	Vadose Zone Soil	EGQMKIATLVLAATILVPAGTLLPQPLQRDVPAEVDAARNALKGAYNDLQHAGGEWGGHRVNAMNHIQEAIKELNEAEKWAKEHHDIK*
Ga0126375_102568121	3300012948	Tropical Forest Soil	MKIAHLLLGVTILVAPGTLLPQPPQRDVPGEVDSARNALKQAHNDLQHAGGEWGGHRVKALQHIQEAISELNEAEKWAREHHDIK*
Ga0126375_103513812	3300012948	Tropical Forest Soil	MKIATLLLAVVTLVAPAALFPQPPQKDVPAEVDAARNSLKQSLSDLEKAGGEWGGHRQKAMQHIQQALGELNQAEQWAKAHHEIK*
Ga0126369_103676554	3300012971	Tropical Forest Soil	MKIATVVLAATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQHAGGEWGGHRVSAMKHIQEAMAELTRPRTGRNNITI*
Ga0126369_104731082	3300012971	Tropical Forest Soil	MKIAHLFLAVTILVAPGTLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRVKALQHIQEAITELNEAEKWAREHHDIK*
Ga0182036_103657381	3300016270	Soil	MKIATLLLAVTILVAPTTLFSNPPQKDVPAEVTAAQNALKGAYNDLQHAGGDWGGHRVSAMQHIQEALTELNEAENR
Ga0182033_101610644	3300016319	Soil	APTTLFSNPPQKDVPAEVTSAQGALKGAYTDLQHAGGEWGGHRAKAMQHIQEALTELNEAEKWAREHHDIK
Ga0182033_114705421	3300016319	Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEIDSARTSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQW
Ga0182034_101016773	3300016371	Soil	MKIATLLLAVVILVAPTTLFSNPPQTDVPAEVSAAQSALKGAYNDLQHAGGEWGGHRVKEMQHIQEALSELSEAEKYAREHHDIK
Ga0182037_113482471	3300016404	Soil	MKIATLLLAVLLFPAATLLLQPPQKDVPAELDSARTALKGALNDLQHGGSDWGGHKAKAMEHIQQAVGELNEAEKFAKQHNAIK
Ga0187779_104632092	3300017959	Tropical Peatland	MKIATLLLAVLLFPAATLLSQPPQKDVPAELDSARSALKGALNDLQHGGSDWGGHKAKAMQHINEAVGELNEAEKFAREHHAPMK
Ga0187779_106089912	3300017959	Tropical Peatland	MKIATLVLAAPILVPTATMFPRSPQHDVPAEVESARGALKGAYNDLQHAGGEWGGHRVKAMDHIQAAIAELNEAEKWAREHHDIK
Ga0187846_100647502	3300021476	Biofilm	MKIATLLLATLLFPGTILLSQPPQKDVPAEVDAARGALKGALNDLQHAGGEWGGHRVKAMEHIQQAINELNEAEKFAHEHHDMK
Ga0210409_1000197112	3300021559	Soil	MKIATLVLAATILLPAASLQPQTPQRDVPAEVDSARNALKGALNDLQHAGGQWGGHRDNAMNHIRQAIAELNEAEKWAHEHHDAK
Ga0126371_1000043735	3300021560	Tropical Forest Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEIDSARTSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHHDVK
Ga0126371_1001370010	3300021560	Tropical Forest Soil	MKIATVVLAATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQRAGGEWGGHRVNAMKHIQEAVAELNEAETWAKQHHDVK
Ga0126371_100264764	3300021560	Tropical Forest Soil	MKIATLLLAAITLVAPATLFPQPPQKDVPAEIDAARSSLKQASSDLGKAGGEWGGHRQKAIEHIQQAVSELNQAEQWAKAHHDIK
Ga0126371_100446916	3300021560	Tropical Forest Soil	MKIAKLVLAATIFVPTVPLFSLPPQGDVPAEVNTARGALKGAYNDLQHAGGEWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDIK
Ga0126371_100535063	3300021560	Tropical Forest Soil	MKIATVVLAATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQHAGGEWGGHRVSAMKHIQEAMAELNEAENWAKQHHDMK
Ga0126371_102170942	3300021560	Tropical Forest Soil	MKTATLLLAAITLIAPATLFPQPPQKDVPAELDSARNSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHKDVK
Ga0126371_103075822	3300021560	Tropical Forest Soil	MRIATLVFAAAILVTPSTLFPKPAQHDVPAEMETARSALKTAYNDLERAGTDWGGHKSKAMQHIQEAMSELNESEKWAKEHHDMK
Ga0126371_103624243	3300021560	Tropical Forest Soil	MKIAKLVLAITILVPTAPVFSLPPQGDVPAEVNTARGALKGAYNDLQHAGGEWGGHRAKAMEHIQAAMTELNEAEKW
Ga0126371_105112842	3300021560	Tropical Forest Soil	MKIATLLLAATILVPTASLFPSAPQRDVPAEVDSARGALKGALSDLQHAGGEWGGHRAKAMEHIQAAMTELNEAEKWAKEHHDVK
Ga0126371_105223022	3300021560	Tropical Forest Soil	MVCSPLLEDLVKIATLLFAVTILVAPTTLFSNPPQKDVPAEVTSAQSALKGALNDLQHAGGEWGGHKGKAMTHIQEALAELGQAEKWAQEHHDIK
Ga0126371_112454912	3300021560	Tropical Forest Soil	MKIATLALAATILVPSATMFPRSPQRDVPAEVDSARGALKGAYNDLQHAGGEWGGHRAKAMDHIQAAINELNEAEKWAKEHHDVK
Ga0126371_120671251	3300021560	Tropical Forest Soil	ILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQHAGGEWGGHRVSAMKHIQEAMAELNEAETWAKQHHDMK
Ga0126371_127831791	3300021560	Tropical Forest Soil	NRVALGTIADCEHFESAPLSEEQMKISTLVLAATILVPTATLFPRSPQHDVPAEVESARTALKGAYNDLQHAGGEWGGHRANAMNHIQEALRELNEAEKWAKEHHDVK
Ga0126371_128832471	3300021560	Tropical Forest Soil	MKLATLLLAAITLVAPAALFPQPPQKDVPAEVDSARNSLKQAHSDLEKAGGEWGGHRVKAMQHIQEALTE
Ga0126371_133018571	3300021560	Tropical Forest Soil	AATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLEHAGGEWGGHRATAMKHIQAAIAELNEAETWAKQHHDIK
Ga0209060_100059803	3300027826	Surface Soil	MKIAKLVLAVAILVPTAPLFSRPPQDVPAEVNSAREALKGAHHDLEHAGGTWGGHRVKAMEHIQAAIAELNEAENWAKTHHDIK
Ga0209580_104319762	3300027842	Surface Soil	MKITTLVLAATLLTPTTMLFSRAEQRDSPAEVESARRALTGAYNDLDHAGHEWGGHISNAKGHIQEAIKELNEAEKFAREHREMK
Ga0209465_100309301	3300027874	Tropical Forest Soil	LRALVEGQMKIATVVLAATILVPTVPLFSLPPQGDVPAEVNSARGALKGAYNDLQHAGGEWGGHRVNAMKHIQEAVAELNEAETWAKQHHDVK
Ga0209465_102874282	3300027874	Tropical Forest Soil	MKIAHLFLAVTILVAPGTLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRAKALQHIQEAISELNEAEKWARE
Ga0137415_100743351	3300028536	Vadose Zone Soil	MKIATLVLAATILVPAGTLLPQPLQRDVPAEVDAARNALKGAYNDLQHAGGEWGGHRVNAMNHIQEAIKELNEAEKWAKEHHDIK
Ga0170834_1067728624	3300031057	Forest Soil	MKIATLLLAATILVPTATLFPRSPQRDVPAEVESARGALKGAYNDLEHAGGEWGGHRGTAMKHIQAALSELNEAEKWAKEHHDVK
Ga0170824_1187482422	3300031231	Forest Soil	MKFVPLLLALTILVAPATLLPQPPQRDVPGEVDSARNALKQAHNDLQHAGGEWGGHRVKAMQHIQEAIAELNEAEKWAREHHEIK
Ga0170818_1005513771	3300031474	Forest Soil	MKFARLLLALTILVAPATLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRVKAMQHIQEAIAELNEAEKWAREHHEIK
Ga0318541_106069821	3300031545	Soil	MKIATLLLAVVILVAPTTLFSNPPQTDVPAEVSAAQSALKGAYNDLQHAGGEWGGHRVKAMQHIQEALSELSEAEKYAREHHDIK
Ga0318538_103325291	3300031546	Soil	IAPTTLFSNPPQKDVPAEVTSAQGALKGAYTDLQHAGGEWGGHRAKAMQHIQEALTELNEAEKWAREHHDIK
Ga0318538_106353461	3300031546	Soil	MKIATLLLAVTILVAPTTLFSNPPQKDVPAEVTAAQNALKGAYNDLQHAGGDWGGHRVSAMQHIQEALTELNEAE
Ga0310915_107232142	3300031573	Soil	MKIATLLLAVLLFPAATLLSQPPQKDVPAELDSARTALKGALNDLQHGGSDWGGHKAKAMEHIQQAVGELNEAEKFAKQHNAIK
Ga0310915_111140621	3300031573	Soil	MKIATLLLAVTILVAPTTLFSNPPQKDVPAEVTAAQNALKGAYNDLQHAGGDWGGHRVSAMQHIQEALTELNEAEKWAREHHDIK
Ga0307469_106378281	3300031720	Hardwood Forest Soil	MKIAALVLAATILVPTATVFPRSPQQRDVPAEVESARNALKGAYNDLEHAGGEWGGHRVTAMKHIQAAMTELNEAEK
Ga0307469_109948032	3300031720	Hardwood Forest Soil	MKFAPLLLALTILVAPATLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRVKAMQHIQEAIAELNEAEKWAREHHEIK
Ga0306918_107518131	3300031744	Soil	MKIATLLLAVTILIAPTTLFSNPPQKDVPAEVTSAQGALKGAYTDLQHAGGEWGGHRAKAMQHIQEALTELNEAEKWAREHHDIK
Ga0307473_105075281	3300031820	Hardwood Forest Soil	LALTILVAPATLLPQPPQRDVPGEVDSARNALKQAHNELQHAGGEWGGHRVKAMQHIQEAIAELNEAEKWAREHHEIK
Ga0306919_107252821	3300031879	Soil	PVLEDLINIATLLLAVTILVAPATLFSNPPQKDVPAEVTSAQGALKGAYTDLQHAGGEWGGHRAKAMQHIQEALTELNEAEKWAREHHDIK
Ga0306919_115000241	3300031879	Soil	VITLVAPAALFPQPPQKDVPAEIDSARTSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHHDVK
Ga0310916_102505691	3300031942	Soil	TLFSNPPQKDVPAEVTSAQGALKGAYTDLQHAGGEWGGHRAKAMQHIQEALTELNEAEKWAREHHDIK
Ga0310913_101482871	3300031945	Soil	MKIATLLLAVVILVAPTTLFSNPPQTDVPAEVSAAQSALKGAYNDLQHAGGEWGGHRVKAMQHIQEALSELSEAEKCAREHHDIK
Ga0310913_107550941	3300031945	Soil	MKIATLLLAAITLIAPATLFPQPPQKDVPAELDSARNSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHKDVK
Ga0306926_122269362	3300031954	Soil	MKIATLLLAVLLFPAATLLSQPPQKDVPAELDSARTALKGALNDLQHGGSDWGGHKAKAMEHIQQAVGELNEAEK
Ga0306926_129118561	3300031954	Soil	AALFPQPPQKDVPAEIDSARTSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAKAHHDVK
Ga0307471_1002878561	3300032180	Hardwood Forest Soil	MKIAALVLAATILVPTATVFPRSPQQRDVPAEVESARNALKGAYNDLEHAGGEWGGHRVTAMKHIQAAMTELNEAEKWAKEHHDVK
Ga0307471_1007866542	3300032180	Hardwood Forest Soil	MKIAKLVLAATMLVPTVPLFSLSPQGDVPAEVNTARGALKGAYNDLQHAGGEWGGHRAKAMEHIQAAMTELNEAEKW
Ga0306920_1010491351	3300032261	Soil	MKIATLLLAVITLVAPAALFPQPPQKDVPAEIDSARTSLKQAVSDLGKAGGEWGGHRQKAVEHIQQAVSELNQAEQWAK
Ga0335085_1000074338	3300032770	Soil	MKIATLLLAAITLVAPATLFPQPPQKDVPAEVDSARNALKEAHNDLEKAGGDWGGHRAKAIQHIQEALGELNQAEQWARAHHEIK
Ga0335082_101859541	3300032782	Soil	MKIATLLLAAITLVAPATLFPQPPQKDVPAEVDSARNALKQAHSDLEKAGGDWGGHRVKAMQHIQEALGELNQAEQWARAHHEIK
Ga0335070_101277761	3300032829	Soil	MKIATLLLAAITLVAPATLFPQPAQRDVPAEVDSARNALKQAHGDLEHAGGEWGGHRVKAMQHIQEALTELNEAEKWARAHHDMK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083106

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences