Metagenome / Metatranscriptome Family F083104

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083104
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	59 residues
Representative Sequence	MDLDRIYALAKRVKQRLHCSQTIAEYTASLLALEHTVSKDSFELLAEIQAIHSLCSHSAM
Number of Associated Samples	62
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.50 %
% of genes near scaffold ends (potentially truncated)	17.70 %
% of genes from short scaffolds (< 2000 bps)	73.45 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.726 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (41.593 % of family members)
Environment Ontology (ENVO)	Unclassified (42.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.133 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.09% β-sheet: 0.00% Coil/Unstructured: 40.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00158	Sigma54_activat	40.71
PF02954	HTH_8	12.39
PF00196	GerE	7.96
PF07730	HisKA_3	3.54
PF02518	HATPase_c	2.65
PF07883	Cupin_2	0.88
PF07885	Ion_trans_2	0.88
PF03050	DDE_Tnp_IS66	0.88
PF04098	Rad52_Rad22	0.88
PF07728	AAA_5	0.88
PF13181	TPR_8	0.88
PF09335	SNARE_assoc	0.88
PF03167	UDG	0.88
PF00383	dCMP_cyt_deam_1	0.88
PF06672	DUF1175	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	3.54
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	3.54
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	3.54
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	3.54
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.88
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.88
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.88
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.88
COG3234	Uncharacterized conserved protein YfaT, DUF1175 family	Function unknown [S]	0.88
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.88
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.27 %
Unclassified	root	N/A	13.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.19 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.19 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	2.65 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.77 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2.65 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	1.77 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2.65 %
Granulicella sp. GAS466	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	1.77 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1127529	Not Available	691	Open in IMG/M
3300000733\|JGI12408J11912_1014229	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300003218\|JGI26339J46600_10017736	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300003218\|JGI26339J46600_10083811	Not Available	800	Open in IMG/M
3300003219\|JGI26341J46601_10016000	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300003219\|JGI26341J46601_10037449	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300003219\|JGI26341J46601_10109249	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300003223\|JGI26343J46809_1001737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1541	Open in IMG/M
3300003368\|JGI26340J50214_10030628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1596	Open in IMG/M
3300003368\|JGI26340J50214_10060824	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300004080\|Ga0062385_10370940	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300004080\|Ga0062385_10563525	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300004152\|Ga0062386_100491504	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300004633\|Ga0066395_10542258	Not Available	675	Open in IMG/M
3300005610\|Ga0070763_10287668	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300006052\|Ga0075029_100275801	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300006052\|Ga0075029_101274564	Not Available	515	Open in IMG/M
3300006086\|Ga0075019_10434885	Not Available	807	Open in IMG/M
3300006174\|Ga0075014_100032780	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300006642\|Ga0075521_10247258	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300009524\|Ga0116225_1259085	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300009644\|Ga0116121_1070132	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300009683\|Ga0116224_10591326	Not Available	530	Open in IMG/M
3300010048\|Ga0126373_10002875	All Organisms → cellular organisms → Bacteria	12758	Open in IMG/M
3300010048\|Ga0126373_11053162	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300010339\|Ga0074046_10228988	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300010339\|Ga0074046_10582110	Not Available	663	Open in IMG/M
3300010341\|Ga0074045_10787616	Not Available	601	Open in IMG/M
3300010343\|Ga0074044_10516662	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300010361\|Ga0126378_11998910	Not Available	661	Open in IMG/M
3300010376\|Ga0126381_102451545	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300010379\|Ga0136449_103583957	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010937\|Ga0137776_1079452	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300014155\|Ga0181524_10160026	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300014155\|Ga0181524_10249793	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300014162\|Ga0181538_10158556	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300014164\|Ga0181532_10328508	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300014200\|Ga0181526_10112305	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300014838\|Ga0182030_10000737	All Organisms → cellular organisms → Bacteria	63975	Open in IMG/M
3300016702\|Ga0181511_1377458	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300016702\|Ga0181511_1439316	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300016750\|Ga0181505_10300984	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300017932\|Ga0187814_10153689	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300017935\|Ga0187848_10356062	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300017972\|Ga0187781_10046765	All Organisms → cellular organisms → Bacteria	2977	Open in IMG/M
3300017972\|Ga0187781_10446008	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300017995\|Ga0187816_10334335	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300018006\|Ga0187804_10231188	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300021406\|Ga0210386_11776159	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300021560\|Ga0126371_11114250	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300025650\|Ga0209385_1001220	All Organisms → cellular organisms → Bacteria	10897	Open in IMG/M
3300025650\|Ga0209385_1005557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5361	Open in IMG/M
3300026817\|Ga0207775_115663	Not Available	575	Open in IMG/M
3300027703\|Ga0207862_1108376	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300027783\|Ga0209448_10229643	Not Available	614	Open in IMG/M
3300027812\|Ga0209656_10002804	All Organisms → cellular organisms → Bacteria	11298	Open in IMG/M
3300027812\|Ga0209656_10086238	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300027812\|Ga0209656_10107933	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300031820\|Ga0307473_10942030	Not Available	626	Open in IMG/M
3300031890\|Ga0306925_10028280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	5686	Open in IMG/M
3300032160\|Ga0311301_10523395	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300032160\|Ga0311301_11149868	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300032160\|Ga0311301_11677793	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300032160\|Ga0311301_12140281	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300032770\|Ga0335085_10003547	All Organisms → cellular organisms → Bacteria	26851	Open in IMG/M
3300032770\|Ga0335085_10018834	All Organisms → cellular organisms → Bacteria → Acidobacteria	9902	Open in IMG/M
3300032770\|Ga0335085_10049210	All Organisms → cellular organisms → Bacteria	5712	Open in IMG/M
3300032770\|Ga0335085_10080183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4287	Open in IMG/M
3300032770\|Ga0335085_10164168	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300032770\|Ga0335085_10199426	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300032770\|Ga0335085_10358947	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300032770\|Ga0335085_10766053	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300032770\|Ga0335085_11889208	Not Available	609	Open in IMG/M
3300032782\|Ga0335082_10162977	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300032782\|Ga0335082_10164142	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300032782\|Ga0335082_10202833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1883	Open in IMG/M
3300032782\|Ga0335082_11065567	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300032783\|Ga0335079_10000127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	87944	Open in IMG/M
3300032783\|Ga0335079_10010465	All Organisms → cellular organisms → Bacteria → Acidobacteria	10559	Open in IMG/M
3300032783\|Ga0335079_10515268	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300032783\|Ga0335079_10544490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1232	Open in IMG/M
3300032783\|Ga0335079_11168406	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300032805\|Ga0335078_10762809	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300032805\|Ga0335078_11464496	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300032828\|Ga0335080_10062048	All Organisms → cellular organisms → Bacteria	4140	Open in IMG/M
3300032828\|Ga0335080_10156343	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300032828\|Ga0335080_10201108	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300032828\|Ga0335080_11119126	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300032829\|Ga0335070_10296210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1569	Open in IMG/M
3300032829\|Ga0335070_10333068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300032829\|Ga0335070_10532068	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300032829\|Ga0335070_10585232	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300032892\|Ga0335081_10140950	All Organisms → cellular organisms → Bacteria	3472	Open in IMG/M
3300032892\|Ga0335081_10746278	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300032893\|Ga0335069_10022255	All Organisms → cellular organisms → Bacteria	8741	Open in IMG/M
3300032893\|Ga0335069_10374423	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300032893\|Ga0335069_10379691	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300032893\|Ga0335069_10546484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300032893\|Ga0335069_10714160	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300032893\|Ga0335069_11308410	Not Available	788	Open in IMG/M
3300032897\|Ga0335071_10649122	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300032897\|Ga0335071_11813796	Not Available	554	Open in IMG/M
3300032898\|Ga0335072_11810736	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300032954\|Ga0335083_10049554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	4461	Open in IMG/M
3300032955\|Ga0335076_10338689	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300032955\|Ga0335076_11079441	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300033004\|Ga0335084_10193686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2111	Open in IMG/M
3300033004\|Ga0335084_11145764	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300033158\|Ga0335077_10066770	All Organisms → cellular organisms → Bacteria	4310	Open in IMG/M
3300033158\|Ga0335077_10365700	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300033158\|Ga0335077_10579000	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300033402\|Ga0326728_10000484	All Organisms → cellular organisms → Bacteria	155742	Open in IMG/M
3300033402\|Ga0326728_10003260	All Organisms → cellular organisms → Bacteria	51036	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.80%
Aquatic	Environmental → Aquatic	29.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.03%
Freshwater	Environmental → Aquatic → Freshwater	24.78%
Sediment	Environmental → Aquatic → Sediment	3.54%
Peat	Environmental → Terrestrial → Peat	1.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	47.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.81%
Loam	Environmental → Terrestrial → Soil → Loam	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	46.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	41.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	13.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.54%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000733	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_11275292	2228664022	Soil	MDLDRIYALAKRVKQRLHCSQQMAEYTASLLEWEHTVSKDSFQLLAEIQAIHSLHGHSTI
JGI12408J11912_10142292	3300000733	Tropical Forest Soil	MELDKIYALATRVKRRFHCSQQMAEYMASLLTLAHVASGENFELLADIQAIYSLQVGG*
JGI26339J46600_100177362	3300003218	Bog Forest Soil	MELDRIYALAKRMKQKLHCSQQRAEYTASLLALEHTVSKDSFELLADIQAIHYLCSHSIR
JGI26339J46600_100838113	3300003218	Bog Forest Soil	MDLDRIYALAKRVKQRLHCSQQIAEYTASLLALERTVSKDSFELLAEIQTIHSLHGHSTI
JGI26341J46601_100160002	3300003219	Bog Forest Soil	MDLDRIYALAKRVKQRLHCSQQRAEYIASLLAWGHNVSKDSFQLLSEIQAIHLLHGHSTI
JGI26341J46601_100374492	3300003219	Bog Forest Soil	MGLDRIYALAKRVKQRLHCSQTIAEYAASLLVLEHTVSKDSFELLAEIQAIHSLCSHSAM
JGI26341J46601_101092492	3300003219	Bog Forest Soil	MDLDRIYTLAKRVKQRLHCSQQRAEYIASLLAWEHTVSKDSFQLLSEIQAVHLLHGHSTIXSDRYGAG*
JGI26343J46809_10017372	3300003223	Bog Forest Soil	MDMDRIYELAKRVKQRLHCSQTIAEYTASLLVLEHTVSKDSFELLAEIQAVHSLCSHSAM
JGI26340J50214_100306281	3300003368	Bog Forest Soil	MDLDRIYTLAKRVKQRLHCSQQRAEYIASLLAWEHTVSKDSFQLLSEIQAVHLLHGHSTI
JGI26340J50214_100608242	3300003368	Bog Forest Soil	MDLDRIYAPATRVKQRLHCSQQEAEYTASLLVLEHTVSKDSFELVADIQAIHYSCSHSIR
Ga0062385_103709402	3300004080	Bog Forest Soil	MDQDRIYALAKRVRQRLHCSQQMAEYTASLLAWEHTVSKDSFQLLAEIQAIHSLHGHSTI
Ga0062385_105635252	3300004080	Bog Forest Soil	MDLDRIYVLAKRVKQGLHCSQQIAEYTASLLAMEHTVSKDSFELLADIQAIHYLCSHSIR
Ga0062386_1004915041	3300004152	Bog Forest Soil	MDLDKMYTLAKRVKQRLHCSQQRAEYIVSLLAWEPTVSKDSFQLLAEIQAIHSLRHHATM
Ga0066395_105422582	3300004633	Tropical Forest Soil	MNQHSILAEATKVKQRLHCSQQRAEYIASLMAWEHTVSSDSFQLLAEIDAIHSLSIHPTSR*
Ga0070763_102876683	3300005610	Soil	MELDRIYATAKRLKQRLHCSQQKAEYIASLLALQRTVSADSFQLLAEIHAVHSPGIRSRDW*
Ga0075029_1002758012	3300006052	Watersheds	MDLDRIYELAKRVQQRLRCSQYRAEYVASLLVLEHTVSNDSFELLAEIQAIHSLCSHSAM
Ga0075029_1012745641	3300006052	Watersheds	MDLDRIYALATRLKQRLHCSQQTAEYTASLLALEHTVSKDSFQLLAEIQAIHSLNGHSTRWSDGYGAE*
Ga0075019_104348852	3300006086	Watersheds	MDLDRIYALAKRVKQRLHCSQTIAEYTASLLVLEHTVSKDSFELLAEIQAIHSLCSHSAM
Ga0075014_1000327803	3300006174	Watersheds	MDLDRIYALAKRVKQRLHCSQTIAEYTASLLAMEHIVSKDSFELLAEIQAIHSLCSHSAM
Ga0075521_102472583	3300006642	Arctic Peat Soil	MDLDRIYALATRVEQRLHCSQQKAEYTASLLALEHTVGKDSFELLADIQAIHYLCSHSIR
Ga0116225_12590852	3300009524	Peatlands Soil	MDMDRIYELAKRVKQRLHCSQTIAEYTASLLVLEHTVSKDSFELLAEIQAIHSLCSHSAM
Ga0116121_10701322	3300009644	Peatland	MDLDWIYALEKRVKQRLHCSQQRAEYIASLLAWEHTVSKDSFDLLAEIQAIHPLRNHSTM
Ga0116224_105913262	3300009683	Peatlands Soil	MDMDRIYELAKRVKQRLHCSQTIAEYTASLLVLEHTVSKDSFELLADIQAIHSLRSHSVM
Ga0126373_1000287511	3300010048	Tropical Forest Soil	MELDKIYALATRVKQRLDCSQQKEEYIASLLALEHSVSQDSMVLLAEIQAIHSLHQSLV*
Ga0126373_110531622	3300010048	Tropical Forest Soil	MNQQSILAEATKVKQRLHCSQQRAEYIASLMAWEHTVSNDSFQLLAEIDAIHSLTIHSTSR*
Ga0074046_102289882	3300010339	Bog Forest Soil	MDLDRIYTLAKRVKQRLHCSQQRAEYIASLLAWEHTVSKDSFQLLSEIQAVHLLHGHSTIWSDRYGAG*
Ga0074046_105821102	3300010339	Bog Forest Soil	MELDRIYALAKRMKQRLHCSQQRAEYTASLLALEHTVSKDSFELLADIQAIHYLCSHSIR
Ga0074045_107876163	3300010341	Bog Forest Soil	MELDRIYALAKRMKQKLHCSQQRAEYTASLLALEHTVSKDSFELLADIQAI
Ga0074044_105166622	3300010343	Bog Forest Soil	MDPDLDRIYALATRVKQRLHCSQQIAEYTASLLALEHTVSKDSFELLAEIQAIHAVRQSL
Ga0126378_119989101	3300010361	Tropical Forest Soil	VELHKICALAKRLKQRLHCSQQTAEYMASVLALEHTASNDSFQLLAENHSIHSSHKLISQAGRK*
Ga0126381_1024515452	3300010376	Tropical Forest Soil	VRDLMDTDRIYELAKRVKQRLHCSQQRAEYIASIVAWEHAVSTDSFELLAEIHAIHSLRHHSCAE*
Ga0136449_1035839572	3300010379	Peatlands Soil	MDLDRIYALATRVKQRLHCSQQRAEYMASLLALEHTVSKDSFELLADIQAIHYSCSHSIR
Ga0137776_10794523	3300010937	Sediment	MDLDRIYALATRVKQRLHCSQQTAEYTASLLVLERTVSKDSFELLAEIQAIHSLHGHSTS
Ga0181524_101600262	3300014155	Bog	MELDKIYSLAKRLKQRLHCSLQRAEYIASILAWEHTFSKDSFELLAEIQAIHAVRQSL*
Ga0181524_102497933	3300014155	Bog	MDLDLIYALAERVKQRLHCSQQIAEYTASLLALEHTVSKDSFELLAEIQAIHSLHGHSTI
Ga0181538_101585564	3300014162	Bog	MELDRVCATAKRLQQRLHCSQQKAEYIASLLALERTVSTDSFQLLAEIHAIHSPGIRSAR
Ga0181532_103285082	3300014164	Bog	MELDRTYATAKRLQQRLHCSQQRAEYIASLLALEHTVSTDSFQLLAEIHAIHSPGIRSAR
Ga0181526_101123052	3300014200	Bog	MDLDRIYALATRVKQRLHCSQHIAEYTASLLALEPTVSKDSFELLAEIQAIHSLRSHSAM
Ga0182030_1000073743	3300014838	Bog	MDLDRIYALEKRVKQRLHCSQQRAEYIASLLAWEHTVSKDSFDLRAEIQAIHSLRNHPTL
Ga0181511_13774581	3300016702	Peatland	AKRLQQRLHCSQQKAEYIASLLALERTVSTDSFQLLAEIHAIHSPGIRSAR
Ga0181511_14393163	3300016702	Peatland	MELDKIYSLAKRLKQRLHCSLQRAEYIASILAWEHTFSKDSFELLAEIQAIHAVRQSL
Ga0181505_103009841	3300016750	Peatland	KRLQQRLHCSQQKAEYIASLLALERTVSTDSFQLLAEIHAIHSPGIRSAR
Ga0187814_101536892	3300017932	Freshwater Sediment	MDLDRIYALAKRVKQRLHCSQTIAEYTASLLALEHTVSKDSFELLAEIQAIHSLCSHSAM
Ga0187848_103560622	3300017935	Peatland	MDLDRIYALEKRVKQRLHCSQQRAEYIASLLAWEHTVSKDSFDLLAEIQAIHPLRNHSTM
Ga0187781_100467655	3300017972	Tropical Peatland	MAMDRIYELAKRVKQRLHCPRQTAECVASLLTLEHTVGKDSFELLAEIQAIHSLSR
Ga0187781_104460082	3300017972	Tropical Peatland	MELDRIYALANRVKQSLHCSYQRAEYIASLLVLEQTVSRNSFELLFEIQAIHSLLNHSTL
Ga0187816_103343351	3300017995	Freshwater Sediment	MDMDRIYELAERVKQRLHCSQQRAEYTASLLAWEHTVSKDSFELLADIQAIHSLQALYCV
Ga0187804_102311883	3300018006	Freshwater Sediment	MDMDNIYELAERVKQRLHCSQQRAEYTASLLAWEHTVSKDSFELLADIQAIHSLQAL
Ga0210386_117761592	3300021406	Soil	PMELDRIYATAKRLKQRLHCSQQKAEYIASLLALQRTVSADSFQLLAEIHAVHSPGIRSRDW
Ga0126371_111142503	3300021560	Tropical Forest Soil	MNQHSILAEATKVKQRLHCSQQRAEYIASLMAWEHTVSSDSFQLLAEIDAIHSLSIHPTS
Ga0209385_10012208	3300025650	Arctic Peat Soil	MDLDRIYALAKRVKQRLHCSQQIAEYTASLLTLEHTVSKNSFELLADIQAIHYLCSHSIR
Ga0209385_10055572	3300025650	Arctic Peat Soil	MDLDLIYALAKRVKQRLHCSQQIAEYTASLLAQEHTVSKDSFELLAEIQAIHSLHGHSTI
Ga0207775_1156632	3300026817	Tropical Forest Soil	MELDKIYALATRVKRRFHCSQQMAEYMASLLTLAHVASGENFELLADIQAIYSLQVGG
Ga0207862_11083762	3300027703	Tropical Forest Soil	RAGREPVGSPMELDRIYALANGVKQMLHCSYQRAEYIASLLILEQAVSRDSFELLFEIQAVHALLNPSTL
Ga0209448_102296433	3300027783	Bog Forest Soil	MDMDRIYELAKRVKQRLHCSQTIAEYTASLLVLEHTVSKDSFELVADIQAIHYSCSHSIR
Ga0209656_100028044	3300027812	Bog Forest Soil	MDLDRIYALATRVKQRLHCSQHIAEYTASLLALEPTVSKDSFELLVEIQAIHSLRSHSAM
Ga0209656_100862382	3300027812	Bog Forest Soil	MDLDRIYTLAKRVKQRLHCSQQRAEYIASLLAWEHTVSKDSFQLLSEIQAVHLLHGHSTIWSDRYGAG
Ga0209656_101079332	3300027812	Bog Forest Soil	MDLDRIYALAKRVKQRLHCTQTIAEYTASLLALEHTISKDSFELLAEIQAIHSLHGHSTI
Ga0307473_109420303	3300031820	Hardwood Forest Soil	MDLDRIYALAKRVKQRLHCSQQMAEYTASLLEWEHTVSKDSFQLLAEIQAIHSL
Ga0306925_100282803	3300031890	Soil	MDLDRIYALADRVKQRLHCSQQKAEYIASLLAWEHTVSEGSFQLLAEIHAIHSLRVHSASRSD
Ga0311301_105233952	3300032160	Peatlands Soil	MDLDRIYALAKRVKQRLHCSQTIAEYTASLLVLEHTVSKDSFELLADIQAIHSLRSHSVM
Ga0311301_111498683	3300032160	Peatlands Soil	MDMDRIYELAKRVKQRLHCSQTIAEYTASLLVLEHTVSKDSFELLAEIQAIHSLCSHSA
Ga0311301_116777932	3300032160	Peatlands Soil	MDPDLDRIYALATRVKQRLHCSQQIAEYTASLLALEYTVSKDSFELVAEIQTVHSLHGHSTI
Ga0311301_121402812	3300032160	Peatlands Soil	MDPDRIYALAKRVRQRLHCSQQMAEYTAALLAWEHTVSKDSFQLLAEIQAIHSLHGHSTI
Ga0335085_1000354719	3300032770	Soil	MDLDRIYALAKKVKQRLHCSQQRAEYTASLLALEHTASRDSFELLAEIQSVHSLRKHSTL
Ga0335085_100188348	3300032770	Soil	MDMDRIYELAERVKQGLHCSQQRAEYTASLLAWEHTVSKDSFELLADIKAIHSLQALYYVES
Ga0335085_100492106	3300032770	Soil	MDLDRIYALATRVKQRLHCSQQEAEYTASLLALEHTVSKDSFELLADIQAIHYLCSHSIR
Ga0335085_100801832	3300032770	Soil	MDLDRIYALATRVKQRLHCSQQAAEYTASLLVLERTVSKDSFELLAEIQAIHSLHGHSKS
Ga0335085_101641684	3300032770	Soil	VKRAMELDRIYALAKRVQRRLHCSQQMSEYIASLLTLEHIVSDDSFELRADIQAIHSLQVGG
Ga0335085_101994263	3300032770	Soil	MELDRIYALASRVKQRLHCSQQMAEYIASLLTLEHNVSKESLALGAEIQAIHTRHIGG
Ga0335085_103589472	3300032770	Soil	MDLDRIFAMARRVKQRLHCSQQTAEYIASLLTLEHTVSEDSFALLADIQAIHSLHRQPAL
Ga0335085_107660532	3300032770	Soil	MELDKIYALANRVQQRLNCSQQRAEYIASLLAWEPTVCKDSFQLLAETQAIHSLASHSAL
Ga0335085_118892082	3300032770	Soil	MDLDRIYALAKRVKQRLHCSQQRAEYIASLLALERTVSADSFQLLAEIHAIHSPGNRSLREW
Ga0335082_101629772	3300032782	Soil	MDLDRIYGVAMSVKQKLHCSQQVAEYTASLLALERTVSKDSFQLLAEIHTIHSLLGHSAI
Ga0335082_101641424	3300032782	Soil	MDPDRIYALATRVKQRLRCSQTIAEYTASLLALEHTVSKDSFELLAEIQAIHSLRSHSAMQVIDK
Ga0335082_102028333	3300032782	Soil	RIYMLAQRVKQRLHCSQQRAEYIASILALEHTVGEDSFALLDEIHAIHTLRSASAV
Ga0335082_110655672	3300032782	Soil	MELDKIYALATRVKRRFHCSQQMAEYMASLLTLAQVASGENFELLADIHAIYSLQVGG
Ga0335079_1000012714	3300032783	Soil	MELDRIYSLAKRLKRKLHCSQQMAEYIASILAWEHSVGKARFELLAEIQAIHTLHTPSAA
Ga0335079_100104656	3300032783	Soil	MDLDRLYALATRVRQRLHCSAQTAEYIASILAWQHTVTEPGFELLAEIQAVHSTRTRSAT
Ga0335079_105152682	3300032783	Soil	MELDRVFALAKRVRQRLNCSQQQSEYIASLLGCGHSVSKESFMLLAEIQAIHSLRSNSTTKRGRN
Ga0335079_105444902	3300032783	Soil	MDIDRIYELAKRVKQRLRCSQQRAEYIASIVAWEHTVSTDSFELLSEIHAIHSLRHHSCA
Ga0335079_111684063	3300032783	Soil	MELDRIYALAKRVQRRLHCSQQMSEYIASLLTLEHIVSDDSFELRADI
Ga0335078_107628093	3300032805	Soil	MDMDRIYDLAERVKQRLHCSQQRAEYTASLLAWEHTVSKDSFELLADIQAIHSLQALYYV
Ga0335078_114644961	3300032805	Soil	MDIDRIYELAKRVKQRLRCSQQRAEYIASIVAWEHTVSTDSFELLSEIHAIHSLRHHSC
Ga0335080_100620483	3300032828	Soil	MDLDRLYALATRVRQRLHCSAQTAEYIASILAWQHTVTEPGFELLAETQAVHSTRTRSAT
Ga0335080_101563433	3300032828	Soil	MKLDRIYSLAKRLKRRLHCSQQMAEYIASILAWERNVSKPSFELLAEIQAIHTFHTPSAV
Ga0335080_102011082	3300032828	Soil	MELDRIYALANRMKQSLHCSYQRAEYIASLLVLEQTVSRESSELLFEIQAIHSLLNHSTL
Ga0335080_111191261	3300032828	Soil	MDMDRIYELAERVKQGLHCSQQRAEYTASLLAWEHTVSKDSFELLADIQAIHSLQALYYV
Ga0335070_102962102	3300032829	Soil	MDLDRIFAIAKRVKQRLHCSQQKAEYIASLLTLEHTVSEDSFALLADINAIHSLHSHPAV
Ga0335070_103330683	3300032829	Soil	MDLDRIYALAKRIKQRLHCSQQTAEYAASLLALEHIVTQDSFELLAEIRAIHSLRSHPAL
Ga0335070_105320682	3300032829	Soil	MDLDRIFAMAKRVKQRLHCSQETAEYIASLLTLEHTVSEGSFALLADIQAIHSLHRKPAL
Ga0335070_105852322	3300032829	Soil	MELDRIYALAKRVKLRLHCSQQMAEYTASLLTLEHLVSKESFELGADIRAIHSLHVGG
Ga0335081_101409502	3300032892	Soil	MGLDRIYALAKRVKQRLHCSHQIAEYTASLLALEHTVSKDSFELLAEIHAIRSLHGHSTI
Ga0335081_107462783	3300032892	Soil	MELDRIYALAKRLKRRLHCSQQNAEYIASILTWEHSVGKARFELLAEIQAIHRLHSLSAV
Ga0335069_100222559	3300032893	Soil	MDLDRIYALATRVKRRLHCSQQRAEYVASLLALEHTVSRDSFELLADIQAIHYLCSHSIR
Ga0335069_103744232	3300032893	Soil	MELDRIYALATKVKQRLHCSQQRAEYIASVMALQHTVSEDSFALLSEIQAIHTLHSPSAV
Ga0335069_103796912	3300032893	Soil	MELDRIYALAKRVQRRLHCSQQMSEYIASLLTLEHIVSDDSFELRADIQAIHSLQVGG
Ga0335069_105464841	3300032893	Soil	LAKRIKQRLHCSQQTAEYTASLLALEHIVTQDSFELLAEIRAIHSLHSHPAL
Ga0335069_107141602	3300032893	Soil	MDMDRIYELAERVKQRLHCSQQRAEYTASLLAWEHTVSKDSFELLADIQAIHSLQALYYV
Ga0335069_113084102	3300032893	Soil	MEFNRIYMLAQRVKQRLHCSQQRAEYIASILALEHTVGEDSFALLDEIHAIHTLRSASAV
Ga0335071_106491221	3300032897	Soil	RRVKQRLHCSQQTAEYIASLLTLEHTVSEDSFALLADIQAIHSLHRKPALG
Ga0335071_118137961	3300032897	Soil	MLRISTGCALAGQLKQMLHCSQQRADYTASLLALGHIVSKDSFELLAEI
Ga0335072_118107362	3300032898	Soil	AKRIMRRLHCSYEQAEYIASLLALKRTVSNESFQLRAEIQAIHSAARRSAA
Ga0335083_100495546	3300032954	Soil	MDMDRIYELAERVKQGLHCSQQRAEYTASLLAWEHTVSKDSFELLADIQAIHSLQALY
Ga0335076_103386892	3300032955	Soil	MDLDRIYALAARVKQRLHCSQQAAEYTASLLVLERTVGKDSFELLAEIQAIHSLHGHSTI
Ga0335076_110794412	3300032955	Soil	MSLERIHALAKRVRQRLHCSPQRAEYIASILAWEHAVTEPRFELLAEIQAIH
Ga0335084_101936861	3300033004	Soil	QRVKQRLHCSQQRAEYIASILALEHTVGEDSFALLDEIHAIHTLRSASAV
Ga0335084_111457642	3300033004	Soil	MELDRIYSLAKRLKQRLHCSQQMAEYIASTLAWERKVSKPRFELLAEIQAIHTFHTPYAV
Ga0335077_100667705	3300033158	Soil	MDMDRIYELAERVKQMLHCSQQSAEYTASLLAWEHTVSKDSFELLADIQAIHSLQALY
Ga0335077_103657002	3300033158	Soil	MDLDRICALATRVKQRLHCSQQTAEYTASLLVLERTVSKDSFELLAEIQAIHSLHGHSTS
Ga0335077_105790004	3300033158	Soil	MSLDRIHALAQRVRQRLHCSQQRAEYIASVLALEHAVTEPGFELLAEIQAIHSLHSR
Ga0326728_100004842	3300033402	Peat Soil	MELDRIYALAKRVKQRLNCSQQMAEYIASILAWEHAANEPRFELLAEIQAVHAVRQSL
Ga0326728_100032602	3300033402	Peat Soil	MELDRIYALAKRLEQRLHCSRQRAEYIASLLAWERKVSRPSFELFAEIQAIHTVRRPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083104

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences