Metagenome / Metatranscriptome Family F083099

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	84 residues
Representative Sequence	MRVRKAGKILLYCSAGLLGLLLLLMLALKLALDRAPAYQAEIKQWVHAQTGYHIAFADVSPSFRWYGPELHFERLELRSKDGRRI
Number of Associated Samples	95
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.60 %
% of genes near scaffold ends (potentially truncated)	98.23 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.354 % of family members)
Environment Ontology (ENVO)	Unclassified (32.743 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.947 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.48% β-sheet: 22.12% Coil/Unstructured: 35.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF10150	RNase_E_G	61.06
PF02545	Maf	2.65
PF02410	RsfS	0.88
PF02590	SPOUT_MTase	0.88
PF00174	Oxidored_molyb	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.65
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	0.88
COG1576	23S rRNA pseudoU1915 N3-methylase RlmH	Translation, ribosomal structure and biogenesis [J]	0.88
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.88
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.69 %
Unclassified	root	N/A	4.42 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.56 %
Unclassified	root	N/A	4.42 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	49.56 %
Unclassified	root	N/A	4.42 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.88 %

Name	Rank	Taxonomy	Distribution
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	26.55 %
Unclassified	root	N/A	4.42 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.65 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.88 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	26.55 %
Unclassified	root	N/A	4.42 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	2.65 %
Raphidophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae	0.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	25.66 %
Unclassified	root	N/A	4.42 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	2.65 %
Chattonellales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales	0.88 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.88 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	25.66 %
Unclassified	root	N/A	4.42 %
Xanthomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	2.65 %
Chattonellaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae	0.88 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.88 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	25.66 %
Unclassified	root	N/A	4.42 %
Xanthomonas oryzae pv. oryzae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae	2.65 %
Heterosigma	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma	0.88 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.88 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	25.66 %
Unclassified	root	N/A	4.42 %
Xanthomonas oryzae pv. oryzae KACC 10331	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae → Xanthomonas oryzae pv. oryzae KACC 10331	2.65 %
Heterosigma akashiwo	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma → Heterosigma akashiwo	0.88 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.88 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10421010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	802	Open in IMG/M
3300001593\|JGI12635J15846_10727337	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300001661\|JGI12053J15887_10092167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1651	Open in IMG/M
3300002245\|JGIcombinedJ26739_100149370	Not Available	2208	Open in IMG/M
3300002917\|JGI25616J43925_10001007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10834	Open in IMG/M
3300002917\|JGI25616J43925_10049114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1830	Open in IMG/M
3300004080\|Ga0062385_11004588	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300004082\|Ga0062384_100661106	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300004091\|Ga0062387_100433687	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300004091\|Ga0062387_100683282	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300004091\|Ga0062387_101712585	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300004092\|Ga0062389_102251953	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300004092\|Ga0062389_102802711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	651	Open in IMG/M
3300004092\|Ga0062389_104874736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	505	Open in IMG/M
3300005165\|Ga0066869_10047408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	747	Open in IMG/M
3300005610\|Ga0070763_10237905	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005921\|Ga0070766_10466042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	836	Open in IMG/M
3300005921\|Ga0070766_10697793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	687	Open in IMG/M
3300005952\|Ga0080026_10115196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	758	Open in IMG/M
3300006052\|Ga0075029_100485357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	814	Open in IMG/M
3300006174\|Ga0075014_100211899	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300007255\|Ga0099791_10406689	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009143\|Ga0099792_11148299	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009500\|Ga0116229_10238638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae → Xanthomonas oryzae pv. oryzae KACC 10331	1551	Open in IMG/M
3300009632\|Ga0116102_1064847	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300009633\|Ga0116129_1129004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	724	Open in IMG/M
3300009709\|Ga0116227_10237176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae → Xanthomonas oryzae pv. oryzae KACC 10331	1406	Open in IMG/M
3300009709\|Ga0116227_10778595	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300010343\|Ga0074044_10631150	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010343\|Ga0074044_11175621	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010379\|Ga0136449_100319017	Not Available	2817	Open in IMG/M
3300011106\|Ga0151489_1540934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	526	Open in IMG/M
3300011120\|Ga0150983_16203859	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300011269\|Ga0137392_10338678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1245	Open in IMG/M
3300011270\|Ga0137391_10769614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	795	Open in IMG/M
3300012205\|Ga0137362_10946510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	735	Open in IMG/M
3300012349\|Ga0137387_10740799	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012918\|Ga0137396_10753298	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012925\|Ga0137419_10238878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1364	Open in IMG/M
3300014498\|Ga0182019_11099445	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300014638\|Ga0181536_10242797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	867	Open in IMG/M
3300015199\|Ga0167647_1091461	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300015242\|Ga0137412_11004064	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300016730\|Ga0181515_1413521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	505	Open in IMG/M
3300016750\|Ga0181505_10232888	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300020581\|Ga0210399_11084764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	641	Open in IMG/M
3300021168\|Ga0210406_10313992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1272	Open in IMG/M
3300021180\|Ga0210396_11344623	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300021181\|Ga0210388_11184156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	649	Open in IMG/M
3300021181\|Ga0210388_11287301	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300021407\|Ga0210383_11145190	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300021407\|Ga0210383_11161068	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300021420\|Ga0210394_11498618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	570	Open in IMG/M
3300021420\|Ga0210394_11603657	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300021432\|Ga0210384_10919688	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300021475\|Ga0210392_10222500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1327	Open in IMG/M
3300021475\|Ga0210392_11244403	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300021478\|Ga0210402_11868974	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300021479\|Ga0210410_10851632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	798	Open in IMG/M
3300021976\|Ga0193742_1149331	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300022523\|Ga0242663_1145593	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300022726\|Ga0242654_10116794	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300024179\|Ga0247695_1010999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1274	Open in IMG/M
3300024275\|Ga0247674_1036878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	581	Open in IMG/M
3300024330\|Ga0137417_1031840	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300024330\|Ga0137417_1141912	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300026217\|Ga0209871_1113465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	529	Open in IMG/M
3300026281\|Ga0209863_10049842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1245	Open in IMG/M
3300026515\|Ga0257158_1089663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	601	Open in IMG/M
3300026551\|Ga0209648_10014114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	6973	Open in IMG/M
3300026557\|Ga0179587_10428600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	864	Open in IMG/M
3300027164\|Ga0208994_1009794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1245	Open in IMG/M
3300027176\|Ga0208992_1010466	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300027381\|Ga0208983_1076839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	630	Open in IMG/M
3300027528\|Ga0208985_1115097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	513	Open in IMG/M
3300027575\|Ga0209525_1112081	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300027635\|Ga0209625_1010918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1977	Open in IMG/M
3300027807\|Ga0209208_10095835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2048	Open in IMG/M
3300027825\|Ga0209039_10319676	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300027853\|Ga0209274_10675061	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300027854\|Ga0209517_10088017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2131	Open in IMG/M
3300027884\|Ga0209275_10141875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae → Xanthomonas oryzae pv. oryzae KACC 10331	1266	Open in IMG/M
3300027889\|Ga0209380_10479039	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300027889\|Ga0209380_10774420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	546	Open in IMG/M
3300027911\|Ga0209698_10688079	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300028016\|Ga0265354_1007750	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300028773\|Ga0302234_10061494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1683	Open in IMG/M
3300028779\|Ga0302266_10290882	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300028879\|Ga0302229_10497683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	538	Open in IMG/M
3300029907\|Ga0311329_10263648	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300029915\|Ga0311358_10266964	Not Available	1481	Open in IMG/M
3300029999\|Ga0311339_10696031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	995	Open in IMG/M
3300030399\|Ga0311353_10340629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1363	Open in IMG/M
3300030707\|Ga0310038_10247215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	827	Open in IMG/M
3300030738\|Ga0265462_12657672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	502	Open in IMG/M
3300030743\|Ga0265461_12385648	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031015\|Ga0138298_1511804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	608	Open in IMG/M
3300031018\|Ga0265773_1037623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	544	Open in IMG/M
3300031057\|Ga0170834_112716162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	818	Open in IMG/M
3300031057\|Ga0170834_113594312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	545	Open in IMG/M
3300031241\|Ga0265325_10297361	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031446\|Ga0170820_14717924	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031708\|Ga0310686_116613270	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031718\|Ga0307474_11304575	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031962\|Ga0307479_10440486	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma → Heterosigma akashiwo	1288	Open in IMG/M
3300031962\|Ga0307479_10627078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1057	Open in IMG/M
3300032180\|Ga0307471_102605231	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300032261\|Ga0306920_104158725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	523	Open in IMG/M
3300034124\|Ga0370483_0168820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	739	Open in IMG/M
3300034125\|Ga0370484_0141670	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300034129\|Ga0370493_0178322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.69%
Host-Associated	Host-Associated	5.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.76%
Aquatic	Environmental → Aquatic	15.93%
Plants	Host-Associated → Plants	5.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.57%
Freshwater	Environmental → Aquatic → Freshwater	12.39%
Peat	Environmental → Terrestrial → Peat	6.19%
Sediment	Environmental → Aquatic → Sediment	3.54%
Peat Moss	Host-Associated → Plants → Peat Moss	3.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	3.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.54%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.54%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.77%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_104210102	3300001593	Forest Soil	MMIRKIGKVLGFCFVGLVVLVLLLMLALKVALDXAPHYEAQIKQWVHAQTGYHIAFASVSPAFRWYGPELYF
JGI12635J15846_107273371	3300001593	Forest Soil	MTIRKLGXVLAFVFGGFLLLVLLAMLAVKIALDRAPHYQAEIKEWVHAQTGFHIAFEHVSPAFRWYGPELYFQRL
JGI12053J15887_100921671	3300001661	Forest Soil	MGARKVGKILLYCFAGLLCVLLLSMLSLKLALDRAPAYQAEIKQWVLAQTGYHISFAGVSPSFRWYGPELHFLRLELRSKDDRRVL
JGIcombinedJ26739_1001493701	3300002245	Forest Soil	MLARKVGKILLYCLAGLLGVLLLLLLAVKITLDRAPAYEAEIKEWVHAQTGYHIGFARVSPSFRWYGPELHFEKMELRSKDD
JGI25616J43925_100010071	3300002917	Grasslands Soil	MSVRKAGKILLSCFAGLLGLVLLLMLALKLALDRAPAYQAEIQQWLHTQTGYHIAFAAVSPSFRWYGPELHFERLELRSKDDR
JGI25616J43925_100491142	3300002917	Grasslands Soil	MIMRKLGRLLAIGFGGLLLLVLLAMLGVKLALDRAPRYQAEIKEWLHAQTGYHIAFAHVSPAFRWYGPELYFDRLELRSKDDQRVLARAAGGRVA
Ga0062385_110045882	3300004080	Bog Forest Soil	MLMRKVAKLLLEVLAGLVALALLLLVAVKVTLDRAPRYQAGIKEWVHEQTGYHIGFEHVSPAFRWYGPELYFDRLELRSKDD
Ga0062384_1006611062	3300004082	Bog Forest Soil	VISAAKIGKILLYCFAGLVVLVLLAMLAVKLALARAPQYQAEIKEWVHAQTGYHIGFAHVSPAFRWYGPELYFQQPELRSKD
Ga0062387_1004336872	3300004091	Bog Forest Soil	MSAAKIGKILLYCLAGLVVFLLLAMLAVKLVLDRAPQYQAQIKEWVHAQTGYHIGFLHVSPAFRWYGPELYFDRPELRSKDDQRVLARAAGARI
Ga0062387_1006832821	3300004091	Bog Forest Soil	MLVRKVGKILLYCLAGLLGVLLLLLLAVKITLDRAPAYEGEIKEWVHAQTGYHIGFARVSPSFRWYGPELHFEQMELRSKDDRRVLARAAGGR
Ga0062387_1017125852	3300004091	Bog Forest Soil	VISAAKIGKILLYCFAGLVVLVLLAMLAVKLALARAPQYQAEIKEWVHAQTGYHIGFAHVSPAFRWYGPELYFQQPELRSK
Ga0062389_1022519532	3300004092	Bog Forest Soil	MSTAVHKIGKILLNGFAGLLGALLLSMLALKIALYRAPAYEAEIKQWVLAQTGYHIAFAGVSPAFRWYGPELRFERMELRSKD
Ga0062389_1028027111	3300004092	Bog Forest Soil	MNTAKIGKILLYCLAGCVVLVLLLMLAVKLALDRAPQYQAQIREWVHAQTGYHIDFSHVSPAFRWYGPELYFDRLELRSKDGQRVLARAKGG
Ga0062389_1048747362	3300004092	Bog Forest Soil	VRKIGKILLYCFAGLLGLLLLSMLALKIALDRAPAYEAEIKEWVRAQTGYHIGFARVSPSFRWYGPELHFDQLELRSKDDRRVLARAAGGRVAADIW
Ga0066869_100474081	3300005165	Soil	VRKVGKILLYCVAGLLCVLLLLMLAVKLALDRAPAYQAEIKAWVHAQTGYHIAFARVSPSFRWYGPELHFERMELRSKDDRRVLARADGGRLAADI
Ga0070763_102379052	3300005610	Soil	MTIRKLGKVLAFSFGGLLLLVLLAMLGVKLALDRAPHYQAEIKEWLHAQTGFHITFEHVSPAFRWYGPELYFDHLELRSKDDQRVLARAAGG
Ga0070766_104660422	3300005921	Soil	MSARKAGKILLYTVAALLGVLLLLMLGLKLALDRAPAYQSEIKQWVHAQTGYHIAFAGVSPSFRWYGPELHFERLELRSKDGQRVLARAAGGRVAADVW
Ga0070766_106977932	3300005921	Soil	MTIRKLGKVLAFSFGGLLLLVLLAMLGVKLALDRAPHYQAEIKEWLHAQTGFHITFEHVSPAFRWYGPELYFDHLELRSKDGQRVLARAAGGRVA
Ga0080026_101151961	3300005952	Permafrost Soil	MIMRKLGKVLAFTCGGLLLLVLLAMLGVKLALDRAPQYQAEIKEWLHAQTGFHIAFAHVSPAFRWYGPELYFAQLELRSKDNQRVLARAAGG
Ga0075029_1004853571	3300006052	Watersheds	MALRKTGKLLLYACAVAIGAVALLMLALKLALDRAPHYQAEIKDWVQAQIGYRIGFAHVSPAFRWYGPELYF
Ga0075014_1002118992	3300006174	Watersheds	MSPRRIGKILLFGAAGSIVVVLVLMLAVKLALDSAPRNQVEIKRWVHERIGYNIDFARVSPAFRWYGPELYFDQMELRSKDD
Ga0099791_104066892	3300007255	Vadose Zone Soil	VRKAGKILLYCVAGLLGLLLLLMLAVKVALDRAPAYQAEIQQWLHAQTGYHIAFAGVSPSFRWYGPELHFE
Ga0099792_111482991	3300009143	Vadose Zone Soil	MALRKAGKILLYCCAGILGIFLLLMLAVKLALDRAPRYQAEIKEWVHDRLGYTIAFAHVSPALRWYGPELYVDQMELRSKD
Ga0116229_102386381	3300009500	Host-Associated	MLLRTAGKILLYAVAAMMGVSLLLLLAVKLTLDRVPRYKAEIKDWVHERSGYHIAFASVSPTLRWYGPELYFDQLELRSAD
Ga0116102_10648471	3300009632	Peatland	MSLRKIGKILLFGIAGLLMLLLTLMLGVKLALDRAPRYQAEIKDWVHRQTGYHIAFTHVSPAFRWYGPELYFDRLE
Ga0116129_11290041	3300009633	Peatland	MRIAKIGKVLLYFLAGFVGLVLLLLLGVKLTLDRAPYYQSEIKNWVFAQTGYHIGFAHVSPALRWYGPELYFDRLELRSKDDRRVLA
Ga0116227_102371761	3300009709	Host-Associated	MALRKLGKTLLFGGAGLLGLILLSMLALKLALDRAPHYQAEIKEWVHARIGYHIAFTHVSPAFRWYGPELYFDQLDLKSKD
Ga0116227_107785952	3300009709	Host-Associated	MRLRTAGKILLYCCAGTLGLILLLMLGVKLALDRVPQYQNEIKAWVHGKIGYHIAFASVAPAFRWYGPELHFERLELRSKDDQ
Ga0074044_106311502	3300010343	Bog Forest Soil	MSLRKIGKILLFVAAGFLIVILTLMLGITVALDRAPRYQAEIEHWVHRQIGYHVAFSHVSPSFRWYGPELYFDRLELRSKDNARVLARA
Ga0074044_111756211	3300010343	Bog Forest Soil	MTLRKLGKILLYCCAGTLGLMVVLMLAVKLALDRAPDYQAQIKEWVRSQTGYHIAFARVSPSFRWYGPEL
Ga0136449_1003190174	3300010379	Peatlands Soil	MSLRKISKILLFGIAGLMMGMLLLMLGVKLALDRAPQYQAEIKDWVHNRIGYHIAFAHVSPAFRWYGPELYFARLELRSKDDQRVLAR
Ga0151489_15409342	3300011106	Soil	VVVRKVGKILLYCVAGLLCVLLLLMLAVKLALDRAPAYQAEIKAWVHAQTGYHIAFARVSPSFRWYGPELHFERMELRSKDDRRVLARAEGGRLAA
Ga0150983_162038591	3300011120	Forest Soil	MSAAKIGKILLYCFAGLVVLTLLIMLAVKLALDRAPQYQAQIKEWVHAQTGYHIGFAHVSPAFRWYGPELYFDRPELRSKDDERVLARAAGARIGADIW
Ga0137392_103386782	3300011269	Vadose Zone Soil	MSVRKAGKILLYCFAGLLGLLLLLMLAVKLALDRAPAYQAEIQQWLHAQTGYHIAFAGVSPSFRWYGPELHFERLEL
Ga0137391_107696141	3300011270	Vadose Zone Soil	VRKAGKILLYCVAGLLGLLLLLMLAVKVALDRAPAYQAEIQQWLHAQTGYHIAFAGVSPSFRWYGPELHFQRLELRSKDDRRILARAA
Ga0137362_109465102	3300012205	Vadose Zone Soil	MRVRKAGKILLYCSAGLLGLLLLLMLALKLALDRAPAYQAEIKQWVHAQTGYHIAFADVSPSFRWYGPELHFERLELRSKDGRRI
Ga0137387_107407991	3300012349	Vadose Zone Soil	MALRKVGKILLYCCAGILGIFLLLMLAVKLALDRAPQYQAAIKEWVHDRIGYTIAFAHVSPAFRWYGPELYFDQLELRSKDGR
Ga0137396_107532981	3300012918	Vadose Zone Soil	MSMRKAGKILLYGFAGLLGLLLVLMLALKLALDRAPAYQAEIQQWLHAQTGYHITFAGVSPSFRWYGPELHFERLELHSKDDRRILARAAGGRVAADI
Ga0137419_102388782	3300012925	Vadose Zone Soil	MALRKVGKILLYCCAGILGIFLLLMLAVKLALDRAPRYQAEIKEWVHDRIGYTIAFAHVSPAFRWYGPELYFDQL
Ga0182019_110994451	3300014498	Fen	MSARKAAKVLLYAVAALLGLVLLLMLAVKIALDRAPLYQTEIKQWVLSQTGYHIAFAGVSPSFRWYGPELHFSRLELRSKDDRRVL
Ga0181536_102427971	3300014638	Bog	MNPRKIGKILLFGIAGSLVAVLGLMLAVKLALDSAPRNQAEIKLWVHEWIGYNIAFVHVSPAFRWYGPELYFDQMELRSKDNQRVLARAGGG
Ga0167647_10914612	3300015199	Glacier Forefield Soil	MSVRKAGKVLLYSLAGVLGLILLLMLAIKLALDRAPAYQAEIKEWVQAQIGYHVAFARVSPSFRWYGPELHFDALELRSKDD
Ga0137412_110040641	3300015242	Vadose Zone Soil	MSIRKIGKILAFTCGGLLALVLLAMLGLKLALDRAPHYQAEIKEWVHAQTGYHIGFAHVSPAFRWYGPELYFER
Ga0181515_14135211	3300016730	Peatland	MSLRKIGKILLFGIAGLLMLLLTLMLGVKLALDRAPRYQAEIKDWVHRQTGYHIAFTHVSPAFRWYGPELYFDRLEVRSKDDRRVLARA
Ga0181505_102328881	3300016750	Peatland	MRLRKIGKLLLLGVAGILILVLTLMLGVKLALDRAPRYQAEIKEWVYEQTGYRIAFSHVSPAFRWYGPELYFDRLEL
Ga0210399_110847642	3300020581	Soil	VISAAKIGKILLYCFAGLVVLVLLAMLAVKLALARAPQYQAEIKEWVHAQTGYHIGFAHVSPALRWYGPELYFQQPELRSKDDQRVLARAGGARIAVD
Ga0210406_103139921	3300021168	Soil	MSARKAGKILLYTVAALLGVLLLLMLGLKLALDRAPAYQSEIKQWVHAQTGYHIAFAGVSPSFRWYGPELHFERLELRSK
Ga0210396_103609711	3300021180	Soil	MIFRRTFKILLLVAAGFVALTLVLMLALKLALDRAPQYQAQIKDWVYHRIGYHIAFAHVWPAFRWYGPELYFDQLELRSPDDRRVLARAAG
Ga0210396_113446231	3300021180	Soil	MIIRKLGRLLAIGFGGLLLLVLLARLGLKIALDRAPRYQAEIKEWLHAQTGYHIAFAHVSPAFRWYGPELYFDRLELRS
Ga0210388_111841562	3300021181	Soil	MSVRKIGKILLYCFAGLLGVLLLLMLAMKLALDRAPAYQAEIKQWVHAQTGYHIAFAGVSPSFRWYGPELHFDRLELRSKDDRRVLARAAGGRV
Ga0210388_112873012	3300021181	Soil	MHVRRAGKILLYCFAGLLGLLLVLMLALKLALDRAPAYQAEIKQWVHAQTGYHIAFAGVSPSFRWYGPELH
Ga0210383_111451901	3300021407	Soil	VISAAKIGKILLYCFAGLVVLVLLAMLAVKLALARAPQYQAEIKEWVHAQTGYHIGFAHVSPALRWYGPELYFQQPELR
Ga0210383_111610681	3300021407	Soil	MTIRKIGKVLAFSFGGLLLLVLLAMLGVKLALDRAPQYQAEIKEWLHAQTGYHIAFAHVSPAFRWYGP
Ga0210394_114986181	3300021420	Soil	MSAAKIGKILLYCFAGLVVLVLLAMLAVKLALNRAPEYQAEIKEWVHAQTGYHIGFAQVSPAFRWYGPELYFDRPELRSKDDQRVLARAGGARIAADIW
Ga0210394_116036572	3300021420	Soil	MAVRKAGKILLYCVAGLMGVLLLLIAALKIALDRAPAYQAEIKQWLHAQTGYHIAFAGVSPSFRWYGPELHFERLELRSKDDRRILARAAGGRVAVDVWQL
Ga0210384_109196881	3300021432	Soil	MSAAKIGKILLYCFAGLVVLTLLIMLAVKLALDRAPQYQAQIKEWVHAQTGYHIGFAHVSPAFRWYGPELYFDRPELRSKDDERVLARAAGAR
Ga0210392_102225001	3300021475	Soil	MRLRAAAKILLYCFAGLAGVLLLLLLGVKLMLDRAPRYQAEIKEWVHAQTGYHIAFQHVSPAFRWYGP
Ga0210392_112444031	3300021475	Soil	VISAAKIGKILLYCFAGLVVLVLLAMLAVKLALARAPQYQAEIKEWVHAQTGYHIGFAHVSPALRWYGPELYFQQPELRSK
Ga0210402_118689742	3300021478	Soil	MRLRTAAKILLYCFAGLAGVLLLLLLGVKLMLDRAPRYQAEIKEWVHAQTGYHIAFQHVSPAFRWYGP
Ga0210410_108516321	3300021479	Soil	MTIRTVGKVLGVCCAWLAALVLLLMLALKLALDRAPRYQAQIKEWVHAQTGYHIGFAHVSPAFRWYGPE
Ga0193742_11493311	3300021976	Soil	MALHKVGKILLYCCAGALGLILVLMLAVKLALDRAPQYQAEIKDWVHDRIGYHIAFAYVSPAFRWYGPELYFDHLELRSK
Ga0242663_11455931	3300022523	Soil	MSAAKIGKILLYCFAGLVVVVLLAMLAVKLALNRAPEYQAEIKEWVHAQTGYHIGFAQVSPAFRWYGPELYFDRPELRSK
Ga0242654_101167941	3300022726	Soil	MTIRTIGKVLGVCCAWLAVLVLLLMLALKLALDRAPRYQAQIKEWVHAQTGYHIGFAHVSPAFRWYGP
Ga0247695_10109992	3300024179	Soil	VRKVGKILLYCVAGLLCVLLLLMLAVKLALDRAPAYQAEIKAWVHAQTGYHIAFARVSPSFRWYGPELHFERMELRSKDDRRVLARAD
Ga0247674_10368782	3300024275	Soil	VRKVGKILLYCVAGLLCVLLLLMLAVKLALDRAPAYQAEIKAWVHAQTGYHIAFARVSPSFRWYGPELHFERMELRSKDDRRVLARADGGRLAA
Ga0137417_10318401	3300024330	Vadose Zone Soil	MALHKVGKILLYCCAGILGLILVVMLAVKLALDRAPQYQAEIKDWVHNRIGYHIAFAHVSPAFFAGMDPSCISTIWNC
Ga0137417_11419121	3300024330	Vadose Zone Soil	MALHKVGKILLYCCAGILGLILVVMLAVKLALDRAPQYQAEIKDWVHNRIGYHIAFAHVSPAFRWYGPELYFDHLELR
Ga0209871_11134651	3300026217	Permafrost Soil	MIMRKLGKVLAFTCGGLLLLVLLAMLGVKLALDRAPQYQAEIKEWLHAQTGFHIAFAHVSPAFRWYGPELYFAQLELRSKDNQRVLARAAGGRVA
Ga0209863_100498421	3300026281	Prmafrost Soil	MSERKAGKILLYGVAGLLGLVLLLMLGVKLALDRAPAYQTEIKEWVRSQTGYHIRFAGVSPSFRWYGPELHFDRLELRSKD
Ga0257158_10896632	3300026515	Soil	MSVRKAGKILLYGVAGLLGLLLLLMLAVKVALDRAPAYQAEIQQWLHAQTGYHIRFAGVSPSFRWYGPELHFERLELRSKDDARVLARAAGGRV
Ga0209648_100141149	3300026551	Grasslands Soil	VRKAGKILLYCVAGLLGLLLLLMLAVKVALDRAPAYQAEIQQWLHAQTGYHITFAGVSPSFRWYGPELHFERLELRSKDDARVLA
Ga0179587_104286001	3300026557	Vadose Zone Soil	MIMRKLGRLLAFGFGGLMLLVLLAMLGVKLALDRAPRYQAEIKEWLHTQTGYHIAFAHVSPAFRWYGPELYFDQLELRSKDDQRVLAS
Ga0208994_10097941	3300027164	Forest Soil	MSIRKVGKVLAFSFGGLLLLVLLAMLAVKLALDRAPQYQAEIKEWLHTQTGFHVAFAHVSPAFRWYGPELYFEQLELRSKDD
Ga0208992_10104661	3300027176	Forest Soil	MAIRKVAKVVGLSFAGLVILVLLLMLALKLALDRAPQYQAQIKEWVHTQTGYHIGFAHVSPAFRWYGPELYFD
Ga0208983_10768391	3300027381	Forest Soil	MIMRKLGRFMAIGFGGLLLLVLLAMLGVKLALDRAPRYQAEIKEWLHAQTGYHIAFAHVSPAFRWYGPELYFDQLELRSKDDQRVLARAAGGR
Ga0208985_11150971	3300027528	Forest Soil	MIIRKLGKIVGFSLGGVLLLVLLAMLALKLILDRAPQYRAEIKEWVHAQTGYHIGFAHVSPAFRWYGPELYFDRLELRSKDDQRVLAR
Ga0209525_11120811	3300027575	Forest Soil	MSTTVRKIGKILLNGFAGLLGVLLLSMLAVKIALYRAPAYEAEIKQWVHAQTGYNIAFAGVSPTFRWYGPELRFERMELRSKDDRRVLARAASGSVA
Ga0209625_10109181	3300027635	Forest Soil	MTVRTIGKVLGVGCALLAVLVLLLMLALKLALDRAPRYQAQIKAWVHAQTGYHIAFAHVSPAFRWYGPELYFD
Ga0209208_100958353	3300027807	Host-Associated	MLLRKAGKILLYAMAGVVAVSLLLLLAVKLSLDRVPRYKAQIKDWVHERSGYHIAFANVSPVLRWYGPELYFDQMELRSKDD
Ga0209039_103196762	3300027825	Bog Forest Soil	MSPRKIGKILLFGIAGSLVAVLGLMLAVKLALDSAPRNQAEIRLWVHEWIGYNIAFAHVSPAFRWYGPELYFDQMELRSKDNQRVLA
Ga0209274_106750611	3300027853	Soil	MTIRKLGKVLAFVFGGFLLLVLLAMLAVKIALDRAPHYQAEIKEWVHAQTGFHIAFERVSPAFRWYGPELY
Ga0209517_100880173	3300027854	Peatlands Soil	MSARRIAKIVLFGIAGSLVAVLGLMLAVKLALDSAPRNQAAIKQWVHERIGYNIAFAHVSPAFRWYGPELYFDQMELRSKDNERVL
Ga0209275_101418751	3300027884	Soil	MLARKVGKILLYCLAGLLGVLLLLLLAVKITLDRAPAYEAEIKEWVHAQTGYHIGFARVSPSFRWYGPELHFEKMELRSKDDRR
Ga0209380_104790392	3300027889	Soil	MSVRKAGKILLYCVAGLLGLLLLLMLAVKVALDRAPAYQAEIQQWLHAQTGYHITFAGVSPSFRWYGPELHFERLELRSKDD
Ga0209380_107744202	3300027889	Soil	MTIRKLGKVLAFVFGGFLLLVLLAMLAVKIALDRAPHYQAEIKEWVHAQTGFHIAFERVSPAFRWYGPELYFQRLELRSKDDQRV
Ga0209067_101190491	3300027898	Watersheds	VGLVLVALLLVKLALDRVPQYQDEIRARIFRQTGLHVAFQHVSPSLRWYGPELRFDRIELRSHDDKRVLARACRRANAA
Ga0209698_106880791	3300027911	Watersheds	MVLRKAGNILLYVCAGTIGFILVLMLAVKLALDRAPQYQAEIKDWVHARIGYRIAFAHVSPAFRWYGPELYFDRLELRSK
Ga0265354_10077502	3300028016	Rhizosphere	MTIRKLGKVLAFSFGGLLLLLLLAMLAVKLALDRAPQYQAEIKEWLHAQTGFHITFAHVSPAFRWYGPELYFERLE
Ga0302234_100614942	3300028773	Palsa	MPTSVRKIGKILLYGFAGLLGVLLLLTLALKIALDRAPAYEAEIKQWVHAQTGYHIAFAGVSPSFRWYGPELHFDRMELRSK
Ga0302266_102908822	3300028779	Bog	MALRRLGRILLYCIAGTLGLGVALMLAAAVAIDRVPHYQTEIKEWVHGQIGYHIAFAQVSPAFRWYGPELYFHGLELRSKDD
Ga0302229_104976832	3300028879	Palsa	MTIRKLGKVLAFVFGGFLLLVLLAMLAVKIALDRAPHYQAEIKEWVHAQTGFHIAFEHVSPAFRWYGPELYFQRLELRSKDDQRV
Ga0311329_102636482	3300029907	Bog	MSLPKAGKILLYGIAALLSLVLLLMLAVKLALDRAPAYQAQIKEWVHAQTGYHIGFAGVSPSFRWYGPELHFDRLELRSKDD
Ga0311358_102669642	3300029915	Bog	MSLPKAGKILLYGIAALLSLVLLLMLAVKLALDRAPAYQAQIKEWVHAQTGYHIGFAGVSPSFRWYGPELHFD
Ga0311339_106960312	3300029999	Palsa	MSVRKAGKILLYCFAGLLGLVLLLMVAMEVALNRAPAYQSEIKEWVHGQTGYHIGFVRVSPSLRWYGPELHFEQL
Ga0311353_103406291	3300030399	Palsa	MTIRKLGKVLAFVFGGFLLLVLLAMLAVKIALDRAPHYQAEIKEWVHAQTGFHIAFEHVSPAFRWYGPELYFQRLELRSKDDQRVLARAAGGRVAMDIW
Ga0310038_102472152	3300030707	Peatlands Soil	MSLRKIGKILLFGIAGMMMGMLLLMLGVKLILDRAPQYQAEIKDWVHNRIGYYIAFSDVSPAFRWYGPELYFAQLE
Ga0265462_126576722	3300030738	Soil	MRAAKFGKILLYCFAGLVIAVLLAMLAVKLALDRAPQYQAEIKEWVHAQTGYHIGFARVSPAFRGYGPELYFDQPELRPKDDLKKKK
Ga0265461_123856482	3300030743	Soil	MSARKVGKFLLYGVAGLLTLVLLLMLAVKLALDRAPAYQAEIKEWVHAQTGYHIRFAGVSPSFRWYGPELHF
Ga0138298_15118043	3300031015	Soil	MIRKAGRVVGLCFAGLVVLVLLLMLALKLALDRAPRYEAQIKEWVHAQTGYHIGFAHVSPAFRWYGPELYFDRLELRSKDDQRVLARAAGGR
Ga0265773_10376231	3300031018	Soil	MTFRKLGKVLAFSFGGLLLLVLLALLGVKLALDRAPQYQAEIKEWLHEQTGFHIAFAHVSPAFRWYGPELYFERLELRSKDDQR
Ga0170834_1127161621	3300031057	Forest Soil	MIVRKLGKLLAIGFGGLLLLALLAMLGLKIALDRAPRYQAEIKEWLHAQTGYHIAFAHVSPAFRWYGPELYFDGLELRSKDDQRVLARAAGGRVAADV
Ga0170834_1135943121	3300031057	Forest Soil	MPLRAAAKMLLYCVAGLAGVLLLLLLGVKLMLDRAPRYQAEIKEWVHAQTGYHIAFQHVPPACRWYGPELYFDRLELRSKDDQRVLARAAGGRIAA
Ga0265325_102973612	3300031241	Rhizosphere	VRKLGKICLYSIAGLLGIVLLLMLALKLALDRAPAYQAEIKDWVHAQTGYHIAFARVSPSFRWYGPELHFENLELRSKDDR
Ga0170820_147179241	3300031446	Forest Soil	VRKVGKILLYCFAGLLCVLLLLMLAVKLALDRAPAYQAEIKAWVHAQTGYHIAFARVSPSFRWYGPELHFE
Ga0310686_1166132701	3300031708	Soil	VISAAKIGKILLYCFAGLVVLVLLAMLAVKLALARAPQYQAEIKEWVHAQTGYHIGFAHVSPAFRWYGP
Ga0307474_113045752	3300031718	Hardwood Forest Soil	MIRKIGKALGFCFAGLVVLVLLLMLALKLALDRAPRYQAEIKEWFHAQTGYHVGFAHVSPAFRWYGPELYFDRLELRSKDDQ
Ga0307479_104404861	3300031962	Hardwood Forest Soil	MSVRKAGKILLYCVAGLLGLLLLLMLAVKVALDRAPAYQAEIQQWLHAQTGYHITFAGVSPSFRWYGPELHFERLELRSKDDRRTLARAAGGRVAAD
Ga0307479_106270781	3300031962	Hardwood Forest Soil	MALRKAAKILLYCCAGILGIFLLLMLTVKLALDRAPRYQAEIKEWVHDRIGYTIAFAHVSPAFRWYGPELYFDQLE
Ga0307471_1026052311	3300032180	Hardwood Forest Soil	MRARRAGKILLYCFAGLLGLLLVLMLALKLALDRAPAYQAEIKQWVHAQTGYHIAFAGVSPSFRWYGPELHFERLELRSKDDRR
Ga0306920_1041587252	3300032261	Soil	MNIRTIGKILALSFAGLVLLVLLAMLGVKIMLDRAPRYQAEIKEWVYAQTGYHIGFRQVSPAFRWYGPELYFDRLELRSKDDQRV
Ga0370483_0168820_1_270	3300034124	Untreated Peat Soil	MLVRKAGKILLYCFAGLLGLVLLLLLGVKLALDRAPAYQAEIKEWVHAQTGYHIGFARVSPSFRWYGPELHFDQLELRSKDDRRILARAA
Ga0370484_0141670_385_642	3300034125	Untreated Peat Soil	MSPRRIGKILLFSTAGSLIAVLGLMLAVKLAIDSAPRNQAEIKRWVHERIGYNIDFAHVSPAFRWYGPELYFDQMELRSKDNERVL
Ga0370493_0178322_430_702	3300034129	Untreated Peat Soil	MNVRKLGKILLSCLAGALGLLLLLMLAIKLALDRAPAYQAEIKEWVHAQTGYHIAFAKVSPSFRWYGPELHFERLELRSKDDARVLARAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences