NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F083067

Metagenome / Metatranscriptome Family F083067

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083067
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 121 residues
Representative Sequence MSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Number of Associated Samples 96
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 81.42 %
% of genes near scaffold ends (potentially truncated) 31.86 %
% of genes from short scaffolds (< 2000 bps) 81.42 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.85

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.407 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.814 % of family members)
Environment Ontology (ENVO) Unclassified
(44.248 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(64.602 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.21%    β-sheet: 19.74%    Coil/Unstructured: 46.05%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.85
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.296.1.1: YktB-liked2a8ea12a8e0.61241
d.198.1.1: Type III secretory system chaperoned1s28a11s280.598
d.198.1.2: Tll0839-liked2plga12plg0.57153
d.296.1.2: PF0168-liked1yb3a11yb30.5641
c.51.5.1: CinA-liked2a9sa12a9s0.55804


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00892EamA 45.13
PF03807F420_oxidored 20.35
PF07831PYNP_C 10.62
PF13714PEP_mutase 5.31
PF03721UDPG_MGDP_dh_N 1.77
PF02653BPD_transp_2 1.77
PF03446NAD_binding_2 0.88
PF069833-dmu-9_3-mt 0.88
PF00795CN_hydrolase 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0213Thymidine phosphorylaseNucleotide transport and metabolism [F] 10.62
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.77
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.77
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.77
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.77
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 1.77
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.88
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.88


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.41 %
All OrganismsrootAll Organisms41.59 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459017|G14TP7Y01AY82FNot Available530Open in IMG/M
3300003990|Ga0055455_10003931All Organisms → cellular organisms → Bacteria2859Open in IMG/M
3300005169|Ga0066810_10048308All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300005329|Ga0070683_100595910Not Available1057Open in IMG/M
3300005329|Ga0070683_101007892Not Available800Open in IMG/M
3300005333|Ga0070677_10397604Not Available725Open in IMG/M
3300005334|Ga0068869_101453577Not Available608Open in IMG/M
3300005336|Ga0070680_100139059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2036Open in IMG/M
3300005337|Ga0070682_100257823Not Available1261Open in IMG/M
3300005338|Ga0068868_100183805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes1735Open in IMG/M
3300005339|Ga0070660_100313659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes1287Open in IMG/M
3300005343|Ga0070687_100256261Not Available1090Open in IMG/M
3300005345|Ga0070692_10041547All Organisms → cellular organisms → Bacteria2357Open in IMG/M
3300005355|Ga0070671_100393530All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300005438|Ga0070701_10098770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1613Open in IMG/M
3300005439|Ga0070711_100579436Not Available934Open in IMG/M
3300005441|Ga0070700_100289546Not Available1191Open in IMG/M
3300005458|Ga0070681_10328596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes1439Open in IMG/M
3300005530|Ga0070679_100416515All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300005535|Ga0070684_100333065All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300005539|Ga0068853_100322650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1432Open in IMG/M
3300005543|Ga0070672_100901669Not Available781Open in IMG/M
3300005545|Ga0070695_101389026Not Available582Open in IMG/M
3300005547|Ga0070693_100025779All Organisms → cellular organisms → Bacteria3166Open in IMG/M
3300005578|Ga0068854_100656987Not Available901Open in IMG/M
3300005614|Ga0068856_100033411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5036Open in IMG/M
3300005614|Ga0068856_102668525Not Available505Open in IMG/M
3300005617|Ga0068859_100547654Not Available1251Open in IMG/M
3300005618|Ga0068864_102643664Not Available508Open in IMG/M
3300005718|Ga0068866_10801691Not Available655Open in IMG/M
3300005873|Ga0075287_1012567Not Available1021Open in IMG/M
3300005873|Ga0075287_1063059Not Available522Open in IMG/M
3300005884|Ga0075291_1066763Not Available502Open in IMG/M
3300006175|Ga0070712_100237954All Organisms → cellular organisms → Bacteria1449Open in IMG/M
3300006358|Ga0068871_100164445All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300006603|Ga0074064_11674447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria848Open in IMG/M
3300006606|Ga0074062_13013763Not Available1211Open in IMG/M
3300006852|Ga0075433_10158949All Organisms → cellular organisms → Bacteria2011Open in IMG/M
3300006852|Ga0075433_11255966Not Available642Open in IMG/M
3300006871|Ga0075434_100043460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4457Open in IMG/M
3300006871|Ga0075434_100274703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1704Open in IMG/M
3300006871|Ga0075434_101585459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria663Open in IMG/M
3300006881|Ga0068865_100529351Not Available987Open in IMG/M
3300006953|Ga0074063_10015047All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300009098|Ga0105245_11162663Not Available819Open in IMG/M
3300009098|Ga0105245_11638899Not Available695Open in IMG/M
3300009545|Ga0105237_11217516Not Available759Open in IMG/M
3300010373|Ga0134128_10843457Not Available1015Open in IMG/M
3300010373|Ga0134128_12104032Not Available622Open in IMG/M
3300010399|Ga0134127_12878952Not Available560Open in IMG/M
3300011106|Ga0151489_1354156Not Available924Open in IMG/M
3300011119|Ga0105246_10094999All Organisms → cellular organisms → Bacteria2158Open in IMG/M
3300012486|Ga0157331_1032256Not Available528Open in IMG/M
3300012960|Ga0164301_10009679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3827Open in IMG/M
3300012961|Ga0164302_10077706Not Available1757Open in IMG/M
3300012961|Ga0164302_10605606Not Available795Open in IMG/M
3300012985|Ga0164308_10031981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3221Open in IMG/M
3300012986|Ga0164304_10886324Not Available697Open in IMG/M
3300012987|Ga0164307_10023053All Organisms → cellular organisms → Bacteria3254Open in IMG/M
3300012989|Ga0164305_10035252All Organisms → cellular organisms → Bacteria2791Open in IMG/M
3300013306|Ga0163162_10964943Not Available963Open in IMG/M
3300013307|Ga0157372_11702679Not Available725Open in IMG/M
3300013308|Ga0157375_13657812Not Available511Open in IMG/M
3300014326|Ga0157380_12508718Not Available581Open in IMG/M
3300014745|Ga0157377_11318248Not Available565Open in IMG/M
3300014968|Ga0157379_10192573Not Available1842Open in IMG/M
3300015371|Ga0132258_10192424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4942Open in IMG/M
3300015371|Ga0132258_10592042All Organisms → cellular organisms → Bacteria2783Open in IMG/M
3300015371|Ga0132258_10701536All Organisms → cellular organisms → Bacteria2548Open in IMG/M
3300015371|Ga0132258_12645962All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300015373|Ga0132257_100477398Not Available1527Open in IMG/M
3300015374|Ga0132255_100768447Not Available1435Open in IMG/M
3300015374|Ga0132255_102304325Not Available822Open in IMG/M
3300021080|Ga0210382_10260527Not Available760Open in IMG/M
3300025552|Ga0210142_1008453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1872Open in IMG/M
3300025904|Ga0207647_10310869Not Available896Open in IMG/M
3300025918|Ga0207662_10024250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3489Open in IMG/M
3300025919|Ga0207657_10705980Not Available783Open in IMG/M
3300025924|Ga0207694_10147229All Organisms → cellular organisms → Bacteria1896Open in IMG/M
3300025927|Ga0207687_10305669Not Available1282Open in IMG/M
3300025927|Ga0207687_11551639All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300025931|Ga0207644_10915082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium735Open in IMG/M
3300025932|Ga0207690_10428272Not Available1060Open in IMG/M
3300025934|Ga0207686_10011562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4836Open in IMG/M
3300025934|Ga0207686_10280970Not Available1229Open in IMG/M
3300025938|Ga0207704_10890148Not Available748Open in IMG/M
3300025944|Ga0207661_10472177Not Available1144Open in IMG/M
3300025944|Ga0207661_12163963Not Available502Open in IMG/M
3300025945|Ga0207679_11286536Not Available671Open in IMG/M
3300025949|Ga0207667_12105543Not Available523Open in IMG/M
3300026035|Ga0207703_10140035All Organisms → cellular organisms → Bacteria2099Open in IMG/M
3300026075|Ga0207708_10003665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11343Open in IMG/M
3300026078|Ga0207702_10058566Not Available3278Open in IMG/M
3300026121|Ga0207683_10145346All Organisms → cellular organisms → Bacteria2138Open in IMG/M
3300026142|Ga0207698_10773834Not Available960Open in IMG/M
3300027288|Ga0208525_1008205Not Available1121Open in IMG/M
3300027523|Ga0208890_1093028All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300027725|Ga0209178_1254251Not Available636Open in IMG/M
3300028589|Ga0247818_11118202Not Available560Open in IMG/M
3300028718|Ga0307307_10062788All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300028771|Ga0307320_10159089Not Available876Open in IMG/M
3300028784|Ga0307282_10211121Not Available929Open in IMG/M
3300028799|Ga0307284_10263171Not Available688Open in IMG/M
3300028807|Ga0307305_10251059Not Available808Open in IMG/M
3300028828|Ga0307312_10751714Not Available646Open in IMG/M
3300028875|Ga0307289_10358152Not Available600Open in IMG/M
3300028880|Ga0307300_10027390All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300028885|Ga0307304_10515787All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300031184|Ga0307499_10218518Not Available594Open in IMG/M
3300031198|Ga0307500_10023067All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300031996|Ga0308176_10285655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1600Open in IMG/M
3300031996|Ga0308176_10836235Not Available964Open in IMG/M
3300033502|Ga0326731_1106258All Organisms → cellular organisms → Bacteria646Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere7.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.08%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.19%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere6.19%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.19%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.42%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.54%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.65%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.65%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.77%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012486Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027288Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)EnvironmentalOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300033502Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4ZMR_049480202170459017Switchgrass, Maize And Mischanthus LitterMTADDASPPPPESLLPLLGLSPAAEVVADPGELLRPGRDRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAIGRGGRFSPFARVRWIDLPEDVAAVAGVVAPLC
Ga0055455_1000393143300003990Natural And Restored WetlandsVSADPGRPPAAEALLPLLGLSPAAEVVADPGDLLRAGRSRDEADTLAARTAWLIADRERGVAVRSADRVIQVAAVANGERFTPFARVRWTDLPEDPAAVAGVVAPLCRSAEALSRLSDHTPSE*
Ga0066810_1004830823300005169SoilMSGRVDGPPSAEAVLPLLGLSADAAIVADVGTYLRAGRDANETEALVARTEWLIADEARGVVVRSTDRVLQVAAVAAGGRFTPFARVHWADLPHDLEAVAAVVAPLCRSAERLHAFGATLQG*
Ga0070683_10059591013300005329Corn RhizosphereLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRSP*
Ga0070683_10100789223300005329Corn RhizosphereMSGAEPWPPNAEALLPLLELSAAAGVVPDPGALLRPGRDQGEADTLVARTTWLIADRERGVALRSTDRVLQVAAVAAAGRFTPFARVHWADLPRDVEAVAAVVAPLCRSAERLHALGATLQG*
Ga0070677_1039760423300005333Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLCR
Ga0068869_10145357723300005334Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0070680_10013905913300005336Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSA
Ga0070682_10025782323300005337Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLGRSAEQLRRLEVRSP*
Ga0068868_10018380533300005338Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRSS*
Ga0070660_10031365913300005339Corn RhizosphereMSGAEPWPPNAGSLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLC
Ga0070687_10025626123300005343Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRSS*
Ga0070692_1004154723300005345Corn, Switchgrass And Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVGLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAERLHDLGATLQG*
Ga0070671_10039353023300005355Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0070701_1009877033300005438Corn, Switchgrass And Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAERLHDLGATLQG*
Ga0070711_10057943613300005439Corn, Switchgrass And Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSAR*
Ga0070700_10028954613300005441Corn, Switchgrass And Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLE
Ga0070681_1032859613300005458Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0070679_10041651523300005530Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAHLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0070684_10033306513300005535Corn RhizosphereMTTDDAWPPPAESLLPLLGLSPAAEVVADPGGLLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAIGRGGRFSPFARVRWADLPEDVAAVAGVVAPLCRSAERLNALRAGPQ*
Ga0068853_10032265033300005539Corn RhizosphereGMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAERLHDLGATLQG*
Ga0070672_10090166923300005543Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVAADNERFTPFARVRWADLPEDLDAVAAVVAPLC
Ga0070695_10138902613300005545Corn, Switchgrass And Miscanthus RhizosphereMSGAEPWPPNAESLLPRLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0070693_10002577943300005547Corn, Switchgrass And Miscanthus RhizosphereHAAGGGHGMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0068854_10065698723300005578Corn RhizosphereMSGAEPWPPNAGSLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0068856_10003341153300005614Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRSP*
Ga0068856_10266852513300005614Corn RhizosphereMTADDAWPPPAESLLPLLGLSPAAEVVADPGGLLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAIGRGGRFSPFARVRWTDLPEDVAAVAGVVAPLCRSAERLNALRAGPE*
Ga0068859_10054765423300005617Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAHLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAERLHDLGANLQG*
Ga0068864_10264366413300005618Switchgrass RhizosphereMTADDAWPPPAESLLPLLGLSPAAEVVADPGGLLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAIGRGGRFSPFARVRWTDLPEDVAAVAGVVAPLCRSAERLNALRAGPQ*
Ga0068866_1080169113300005718Miscanthus RhizosphereMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFTPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0075287_101256723300005873Rice Paddy SoilMSGAEPWPPPNAESLLPLLGLSASAEVVADAGAYLRPGRDRDEADTLVARTEWLIADSQRGVVLRASGRVLQVAVVREDGRFAPFARVHWADLPRDPDAVAAVVAPLCRSAEQLRRPDVRSP*
Ga0075287_106305923300005873Rice Paddy SoilMTGQEWPPAAQALLPLLGLSPAAEVVADPGELLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAVGGGGRFTPFARVRWADLPEDLDAVASVVAPLCRSAERLYRLGAPHR
Ga0075291_106676313300005884Rice Paddy SoilMTGQEWPPAAQALLPLLGLSPAAEVVADPGELLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAVAGGGRFTPFARVRWADLPPDLAAVAEVVAPLCRSAEALSRLSDHTPSE*
Ga0070712_10023795423300006175Corn, Switchgrass And Miscanthus RhizosphereMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEVQVLVARTAWIITDPRGGVLVRSADRVIQVAVAREDGRFTPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0068871_10016444523300006358Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0074064_1167444723300006603SoilMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEGQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSQ*
Ga0074062_1301376313300006606SoilGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEGQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSQ*
Ga0075433_1015894923300006852Populus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDPVAAVVAPLCRSAEQLRRLEVRSS*
Ga0075433_1125596623300006852Populus RhizosphereLPDEPGPGWPPAAEELLPLLGLSPAAEVVADPGDVLRPGRERGEADVLVARTAWLIADGDRGVAVRSAERVLQVAVASDARLFAPFARVHWADLPHDLDAVASIVAPLCRSAERLHALKR
Ga0075434_10004346063300006871Populus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDVEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0075434_10027470313300006871Populus RhizosphereAGGGHGMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDPVAAVVAPLCRSAEQLRRLEVRSS*
Ga0075434_10158545913300006871Populus RhizosphereLPDEPGPGWPPAAEELLPLLGLSPAAEVVADPGDVLRPGRERGEADVLVARTAWLIADGDRGVAVRSADRVLQVAVASDARLFAPFARVHWADLPHDLDAVASIVAPLCRSAERLHALKR
Ga0068865_10052935123300006881Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADHVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0074063_1001504733300006953SoilMSGDGAWPPAAESLLPLLGLSEAAKIADPAEYLRPARATQEAQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRDLDEVAAVVAPLCRSAERLHALACREGRERGSQ*
Ga0105245_1116266313300009098Miscanthus RhizosphereWPPPAESLLPLLGLSPAAEVVADPGGLLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAIGRGGRFSPFARVRWTDLPEDVAAVAGVVAPLCRSAERLNALRAGPE*
Ga0105245_1163889913300009098Miscanthus RhizosphereWPPNAESLLPLLGLSASAEVVADPGAHLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0105237_1121751613300009545Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAER
Ga0134128_1084345723300010373Terrestrial SoilGHGMSGAEPWPPNAGSLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVTRTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0134128_1210403223300010373Terrestrial SoilMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFTPFARVHWADLPRDLEAVAAV
Ga0134127_1287895223300010399Terrestrial SoilGGHGMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0151489_135415623300011106SoilLGLSEAAKIADPAEYLRPARATQEAQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0105246_1009499933300011119Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADHVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0157331_103225613300012486SoilMSGAEPWPPNAESLLPLLGLSASAEVVAEPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRS
Ga0164301_1000967913300012960SoilMSGDAAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFTPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0164302_1007770633300012961SoilMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLQPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFTPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0164302_1060560623300012961SoilMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRQEVRSARRR*
Ga0164308_1003198123300012985SoilMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFTPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSQ*
Ga0164304_1088632413300012986SoilMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLQPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDRRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERL
Ga0164307_1002305343300012987SoilMSGAEPWPPNAGSLLPLLGLSASAEVVADPGAHLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0164305_1003525223300012989SoilMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLRSARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDRRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0163162_1096494323300013306Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGSFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR*
Ga0157372_1170267923300013307Corn RhizosphereMSGAEPWPPNAGSLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLDAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0157375_1365781213300013308Miscanthus RhizosphereDGHHAAGGGHGMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR*
Ga0157380_1250871813300014326Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLDDIAAVVAPLCRSAERMHALACREGRERGSR*
Ga0157377_1131824813300014745Miscanthus RhizosphereMTADDASPPPPESLLPLLGLSPAAEVVADPGGLLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAIGRGGRFSPFARVRWTDLPEDVAAVAGVVAPLCRSAERLNALRAGPQ*
Ga0157379_1019257333300014968Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAHLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAERLHDLGATLQG*
Ga0132258_1019242423300015371Arabidopsis RhizosphereMSGDGAWPPGAESLLPLLGLSEAARIADPADLRPARATQESRVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDRRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACKDGRERGSK*
Ga0132258_1059204253300015371Arabidopsis RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEPVAAVVAPLCRSAEQLRRQEVRSARRR*
Ga0132258_1070153633300015371Arabidopsis RhizosphereMSGQAEWPPSAEALLPLLGLSESAEVVADAGAYLRPGRDPDEAGTLVARTAWLVADPERGVVLRSADRVLQVAVAAEGGRLSPFARVHWGELPHDLEAVASVVAPLCRSAERLRALRPPDA*
Ga0132258_1264596223300015371Arabidopsis RhizosphereMTADKAWPPSAESLLPLLGLSAAAEVVADAGTYLRPGRGRDEADTLIARTAWLIADRERRVVLRSADRVLQVAVAAGRGRFAPFARVRWADLPEDLEAVAAVVAPLCRSAEQLAALSPEGRSR*
Ga0132257_10047739833300015373Arabidopsis RhizosphereMTGDREWPPSAEALLPLLGLSPSAEVVADPGLLLRPGRERDEADTLVARTAWLIADGERGVVVRSADRVIQVAAVAEGARFTPFARVRWADLPHDLEAVAAVVAPLCRSAERLRALRAP*
Ga0132255_10076844733300015374Arabidopsis RhizosphereMSGQAEWPPSAEALLPLLGLSESAEVVADAGAYLRPGRDPDEAGTLVARTAWLVADPERGVVLRSADRVLQVAVAAEGGRLSPFARVHWGELPHDLEAVASVVAPLCRSAERLRALRPPDASTSAPLPC*
Ga0132255_10230432513300015374Arabidopsis RhizosphereMTGDREWPPSAQALLPLLGLSPSAEVVADAGLLLRPGRERDEADTLVARTAWLIADGERGVVVRSADRVIQVAAVAEGARFTPFARVRWADLPHDLEAVASVVAPLCRSAERLRALRAP*
Ga0210382_1026052723300021080Groundwater SedimentMSGDGPWPPSAESLLRLLDLSESATVVADAGAALRPGRAPDEAQALVDRTRWMIADEARGVVVRSTDRVLQVAVAAADERGPAFSPFARVHWADLPHDVTAVAAVVAPLCRSAEQLHAVRRPTP
Ga0210142_100845333300025552Natural And Restored WetlandsVSADPGRPPAAEALLPLLGLSPAAEVVADPGDLLRAGRSRDEADTLAARTAWLIADRERGVAVRSADRVIQVAAVANGERFTPFARVRWTDLPEDPAAVAGVVAPLCRSAEALSRLSDHTPSE
Ga0207647_1031086913300025904Corn RhizospherePLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0207662_1002425053300025918Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRS
Ga0207657_1070598013300025919Corn RhizosphereMSGAEPWPPNAGSLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAERLHDLGATLQG
Ga0207694_1014722933300025924Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0207687_1030566923300025927Miscanthus RhizosphereMTADDAWPPPAESLLPLLGLSPAAEVVADPGGLLRPGRGRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAIGRGGRFSPFARVRWTDLPEDVAAVAGVVAPLCRSAERLNALRAGP
Ga0207687_1155163923300025927Miscanthus RhizosphereGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0207644_1091508223300025931Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0207690_1042827223300025932Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSARRSRREEAPMAGLVVPAREEAVIR
Ga0207686_1001156263300025934Miscanthus RhizosphereMSGDGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFTPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR
Ga0207686_1028097023300025934Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0207704_1089014813300025938Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADHVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0207661_1047217713300025944Corn RhizosphereRDRPYPDGHHAAGGGHGMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRSP
Ga0207661_1216396323300025944Corn RhizosphereMSGAEPWPPNAEALLPLLELSAAAGVVPDPGALLRPGRDQGEADTLVARTTWLIADRERGVALRSTDRVLQVAAVAAAGRFTPFARVHWADLPRDVEAVAAVVAPLCRSAERLHALGATLQG
Ga0207679_1128653623300025945Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAERLHDLGATLQG
Ga0207667_1210554313300025949Corn RhizosphereSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLEAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0207703_1014003513300026035Switchgrass RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAV
Ga0207708_1000366593300026075Corn, Switchgrass And Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRS
Ga0207702_1005856633300026078Corn RhizosphereMSGAEPWPPNAESLLPRLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRS
Ga0207683_1014534633300026121Miscanthus RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDAGEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAVVAPLCRSAEQLRRLEVRS
Ga0207698_1077383413300026142Corn RhizosphereMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPSDLDAVAAVVAPLCRSAEQLRRLEARSARRR
Ga0208525_100820513300027288SoilMRRLGSTLGAWPPDAESLLPLLGLSAAAVIADPAEYLRPARATQEVQVLVARTAWLIADPRGGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAERLHALACREGRERGSR
Ga0208890_109302813300027523SoilSAEAVLPLLGLSADAAIVADVGTYLRAGRDANETEALVARTEWLIADEARGVVVRSTDRVLQVAAVAAGGRFTPFARVHWADLPHDVEAVAAVVAPLCRSAEQLVRLRRSS
Ga0209178_125425113300027725Agricultural SoilMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADTLVARTAWLIADRERGVVLRSADRVIQVAAAADNERFTPFARVRWADLPEDLDAVAAV
Ga0247818_1111820223300028589SoilMSGAEPWPPNAESLLPLLGLSASAEVVADPGAYLRPGRDRDEADALVARTVWLIADRERGVVLRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLEAVAAVVAPLCRSAEQLRRLETRSARRR
Ga0307307_1006278823300028718SoilMSRGSDWPPSAEALLPLLGLSESAEVVSDAGAYLRPGRTPDDAGTLTARTAWLLADPEHGVVLRSTDRVLQVAVAAGDGRFTPFARVHWADLPHDLEAIASVVAPLCRSAERLHALGAGGRSLGQR
Ga0307320_1015908923300028771SoilMSGDEPWPPSAESLLPLLGLSEAAVVVADVAAALCPGRAPEEARVLVVRTAWLIADRRLGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRELEAVAAVVEPLCRSAERLHALACRLPPPMR
Ga0307282_1021112123300028784SoilMSRGSDWPPSAEALLPLLGLSESAEVVSDAGAYLRPGRTPDDAGTLTARTAWLLADPEHGVVLRSTDRVLQVAVAAGDGRFTPFARVHWADLPHDLEAIASVV
Ga0307284_1026317123300028799SoilMSRGSDWPPSAEALLPLLGLSESAEVVSDAGAYLRPGRTPDDAGTLTARTAWLLADPEHGVVLRSTDRVLQVAVAAEDGRFTPFARVHWADLPHDLEAIASVVAPLCRSAERLHALGAGGRSLGQR
Ga0307305_1025105913300028807SoilMSGDGPWPPSAESLLPLLDLSESATVLADVGAALRPGRAPDEAQALVDRTRWMIADEARGVVVRSTDRVLQVAVAAADERGAAFSPFARVHWADLPHDVTAVAAVVAPLCRSAEQLHAVRRPT
Ga0307312_1075171423300028828SoilMSGDGPWPPSAESLLPLLDLSESATVLADVGAALRPGRAPDEAQALVDRTRWMIADEARGVVVRSTDRVLQVAVAAADERGAAFSPFARVHWADLPHDVTAVAAVVAPLCRSAEQLHAVRRPTP
Ga0307289_1035815213300028875SoilMSRGSDWPPSAEALLPLLGLSESAEVVSDAGAYLRPGRTPDDAGTLTARTAWLLADPEHGVVLRSTDRVLQVAVAAEDGRFTPFARVHWADVPHDLEAIASVVAPLCRSAERLHALGAGGRSLGQR
Ga0307300_1002739023300028880SoilMSGDEPWPPSAESFLPLLGLSEAAVVVADVAAALCPGRAPEEARVLVVRTAWLIADRRLGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRDLEAVAAVVEPLCRSAERLHALAGFPRL
Ga0307304_1051578713300028885SoilEALLPLLGLSESAEVVSDAGAYLRPGRTPDDAGTLTARTAWLLADPEHGVVLRSTDRVLQVAVAAEDGRFTPFARVHWADVPHDLEAIASVVAPLCRSAERLHALGAGGRSLGQR
Ga0307499_1021851823300031184SoilMSGDGAWPPGAESLLPLLGLSESAEIADPAEYLRPARATQEAQVLVARTVWLIADPRGGVLVRSADRVIQVAVAREDGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAEQLYALACREGRERGSR
Ga0307500_1002306723300031198SoilMSGDGAWPPGAESLLPLLGLSESAEIADPAEYLRPARATQEAQVLVARTVWLIADPRGGVLVRSADRVIQVAVVRAGGRFAPFARVHWADLPRDLDDVAAVVAPLCRSAEQLYALACREGRERGSR
Ga0308176_1028565513300031996SoilMTADVAWPPPAESLLPLLGLSPAAEVVADPGGLLRPGRARDEADTLVARTAWLIADRQRGVVVRSADRVIQVAAIGRGGRFSPFARVRWTDLPEDVAAVAGVVAPLCRSAERLNALRAGA
Ga0308176_1083623523300031996SoilMTADDASPPPPESLLPLLGLSPAAEVVADPGELLRPGRDRDEADTLVARTAWLIADRERGVVVRSADRVIQVAAVGRGGQFAPFARVRWSDLPEDVAAVADVVAPLCRSAKRLNALRAGA
Ga0326731_110625823300033502Peat SoilMSGRSDWPPSAKALLPLLGLSDEAAIVADVGTYLRAGRDAGEAQALVERTAWLVADGGLGVALRSTDRVLQVAAVAAGGRFTPFARVHWADLPRDLEAVAAVVAPLCRSAERLHAFGAILQG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.