Metagenome / Metatranscriptome Family F083051

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083051
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	90 residues
Representative Sequence	MEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Number of Associated Samples	100
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.32 %
% of genes near scaffold ends (potentially truncated)	43.36 %
% of genes from short scaffolds (< 2000 bps)	92.04 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.150 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.584 % of family members)
Environment Ontology (ENVO)	Unclassified (41.593 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.867 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.91% β-sheet: 16.36% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02211	NHase_beta	35.40
PF02979	NHase_alpha	24.78
PF07883	Cupin_2	23.01
PF02223	Thymidylate_kin	7.08
PF12802	MarR_2	2.65
PF13463	HTH_27	1.77
PF01544	CorA	0.88
PF13177	DNA_pol3_delta2	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	7.08
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.15 %
Unclassified	root	N/A	8.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.15 %
Unclassified	root	N/A	8.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.15 %
Unclassified	root	N/A	8.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.97 %
Unclassified	root	N/A	8.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.32 %
Unclassified	root	N/A	8.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	12.39 %
Unclassified	root	N/A	8.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.31 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.77 %
Rhodothermaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	12.39 %
Unclassified	root	N/A	8.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.77 %
Rhodothermia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	12.39 %
Unclassified	root	N/A	8.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.77 %
Rhodothermales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales	0.88 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.88 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	12.39 %
Unclassified	root	N/A	8.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.77 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.88 %
Rubricoccaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae	0.88 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	12.39 %
Unclassified	root	N/A	8.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.77 %
Rubrivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae → Rubrivirga	0.88 %
Nocardia brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia brasiliensis	0.88 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	12.39 %
Unclassified	root	N/A	8.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.77 %
unclassified Rubrivirga	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae → Rubrivirga → unclassified Rubrivirga	0.88 %
Nocardia brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia brasiliensis	0.88 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	12.39 %
Unclassified	root	N/A	8.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.77 %
Rubrivirga sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae → Rubrivirga → unclassified Rubrivirga → Rubrivirga sp.	0.88 %
Nocardia brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia brasiliensis	0.88 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01DHKBA	Not Available	531	Open in IMG/M
3300003990\|Ga0055455_10200111	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae → Rubrivirga → unclassified Rubrivirga → Rubrivirga sp.	624	Open in IMG/M
3300004114\|Ga0062593_103344802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	514	Open in IMG/M
3300004479\|Ga0062595_100733747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	800	Open in IMG/M
3300004479\|Ga0062595_101355574	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005104\|Ga0066818_1027669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	501	Open in IMG/M
3300005162\|Ga0066814_10089713	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005165\|Ga0066869_10079946	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005166\|Ga0066674_10113538	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005168\|Ga0066809_10010721	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300005169\|Ga0066810_10043781	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005329\|Ga0070683_101158042	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005336\|Ga0070680_100685155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	882	Open in IMG/M
3300005336\|Ga0070680_100943071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300005337\|Ga0070682_100074409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2181	Open in IMG/M
3300005339\|Ga0070660_100720468	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005343\|Ga0070687_100870117	Not Available	644	Open in IMG/M
3300005355\|Ga0070671_100539819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia brasiliensis	1005	Open in IMG/M
3300005364\|Ga0070673_100366570	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005438\|Ga0070701_10409788	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005459\|Ga0068867_100396474	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300005543\|Ga0070672_100414498	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300005549\|Ga0070704_101676210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	587	Open in IMG/M
3300005615\|Ga0070702_100258906	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300005617\|Ga0068859_100757610	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005719\|Ga0068861_101208555	Not Available	731	Open in IMG/M
3300005834\|Ga0068851_10126402	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300005844\|Ga0068862_102731432	Not Available	505	Open in IMG/M
3300005889\|Ga0075290_1008640	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300006046\|Ga0066652_100295316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1437	Open in IMG/M
3300006175\|Ga0070712_100614544	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300006603\|Ga0074064_11742112	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300006604\|Ga0074060_12019810	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300006755\|Ga0079222_11623775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	614	Open in IMG/M
3300006852\|Ga0075433_10145255	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300006871\|Ga0075434_100020944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6350	Open in IMG/M
3300006871\|Ga0075434_102041163	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300006903\|Ga0075426_11006625	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009093\|Ga0105240_10498952	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300009098\|Ga0105245_10220055	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300009098\|Ga0105245_13158560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	511	Open in IMG/M
3300009148\|Ga0105243_12212809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	587	Open in IMG/M
3300009156\|Ga0111538_10173107	All Organisms → cellular organisms → Bacteria	2740	Open in IMG/M
3300009176\|Ga0105242_10388575	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300010362\|Ga0126377_13548161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	504	Open in IMG/M
3300011119\|Ga0105246_10302735	Not Available	1291	Open in IMG/M
3300012353\|Ga0137367_10973134	Not Available	580	Open in IMG/M
3300012951\|Ga0164300_10374831	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012951\|Ga0164300_10842190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	573	Open in IMG/M
3300012957\|Ga0164303_10049540	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300012960\|Ga0164301_10048345	All Organisms → cellular organisms → Bacteria	2172	Open in IMG/M
3300012984\|Ga0164309_10439226	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012985\|Ga0164308_10283288	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300012987\|Ga0164307_10437584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	973	Open in IMG/M
3300012989\|Ga0164305_10595181	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300013297\|Ga0157378_12943295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	528	Open in IMG/M
3300013308\|Ga0157375_13633497	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300014745\|Ga0157377_10131318	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300014968\|Ga0157379_10168205	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300014969\|Ga0157376_11030117	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300014969\|Ga0157376_11786557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300015371\|Ga0132258_10119999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6246	Open in IMG/M
3300015371\|Ga0132258_10390112	All Organisms → cellular organisms → Bacteria → Proteobacteria	3456	Open in IMG/M
3300015371\|Ga0132258_11515972	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300015371\|Ga0132258_13709511	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300015374\|Ga0132255_100536667	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300015374\|Ga0132255_101550721	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300017792\|Ga0163161_11957332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	521	Open in IMG/M
3300020070\|Ga0206356_11435934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300021078\|Ga0210381_10259320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300022756\|Ga0222622_10751492	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300025321\|Ga0207656_10284220	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300025552\|Ga0210142_1095923	Not Available	585	Open in IMG/M
3300025899\|Ga0207642_10513759	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300025904\|Ga0207647_10228816	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300025915\|Ga0207693_10651602	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300025917\|Ga0207660_10372971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1146	Open in IMG/M
3300025918\|Ga0207662_10315135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300025926\|Ga0207659_10857044	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300025933\|Ga0207706_11109822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	661	Open in IMG/M
3300025934\|Ga0207686_10262878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1266	Open in IMG/M
3300025935\|Ga0207709_11263060	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300025936\|Ga0207670_10482382	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300025939\|Ga0207665_11207898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	603	Open in IMG/M
3300025940\|Ga0207691_11090568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	664	Open in IMG/M
3300025960\|Ga0207651_10495224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1056	Open in IMG/M
3300026023\|Ga0207677_10170694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300026089\|Ga0207648_10136811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2158	Open in IMG/M
3300026118\|Ga0207675_101306980	Not Available	746	Open in IMG/M
3300027560\|Ga0207981_1020611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1188	Open in IMG/M
3300027775\|Ga0209177_10119925	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300028380\|Ga0268265_12560263	Not Available	516	Open in IMG/M
3300028608\|Ga0247819_10542918	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300028705\|Ga0307276_10188689	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300028717\|Ga0307298_10064388	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300028719\|Ga0307301_10098560	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300028721\|Ga0307315_10034583	Not Available	1363	Open in IMG/M
3300028744\|Ga0307318_10122306	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300028771\|Ga0307320_10186137	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300028799\|Ga0307284_10152565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300028799\|Ga0307284_10158955	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300028802\|Ga0307503_10566434	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300028807\|Ga0307305_10290783	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300028824\|Ga0307310_10261910	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300031170\|Ga0307498_10288049	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031226\|Ga0307497_10261335	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031938\|Ga0308175_100669199	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300031938\|Ga0308175_101161897	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300031939\|Ga0308174_10737766	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300031996\|Ga0308176_10103931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2500	Open in IMG/M
3300031996\|Ga0308176_11655578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	682	Open in IMG/M
3300032174\|Ga0307470_11351294	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300033433\|Ga0326726_10343047	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.41%
Host-Associated	Host-Associated	40.71%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.87%
Plants	Host-Associated → Plants	40.71%
Aquatic	Environmental → Aquatic	3.54%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.81%
Marine	Environmental → Aquatic → Marine	1.77%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.81%
Loam	Environmental → Terrestrial → Soil → Loam	12.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.31%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005104	Soil and rhizosphere microbial communities from Laval, Canada - mgHAC	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00402000	2170459017	Switchgrass, Maize And Mischanthus Litter	MEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0055455_102001112	3300003990	Natural And Restored Wetlands	MEDVVYAQAQFNLYRPGEWVTVGAGIEDDVVRHAASGLYGRIASPLGDAPYRVRVHRIADEFEELQAAIDMRISAGWEPIRR*
Ga0062593_1033448021	3300004114	Soil	GPPARRRAIRASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0062595_1007337472	3300004479	Soil	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0062595_1013555743	3300004479	Soil	GFAGGRNVEGCGRGMEDVVYAQAQFNLYRPGEWVTVGAGIQDDVVRQAASGLYGRIASPLGDVPYRVRVHKAADPVEELQAAIDLRISAVWEPVRR*
Ga0066818_10276692	3300005104	Soil	FNLYRPGEWVTVGAGVEDGVVRVAASGLYGRVTSPRGDLPYRVRVRRAADEMEERRAAIDLRISADWKPAPR*
Ga0066814_100897131	3300005162	Soil	MGDIVYAQVQFNLYRPGDWVTVGAGVEDDVVRAAASDLYGRVTSPRGDLPYRVRVHRAADELEERRAAIDLRVSADWRPAPR*
Ga0066869_100799462	3300005165	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQPPTR*
Ga0066674_101135383	3300005166	Soil	MDEVVYAQVRFNLYRPGEWVTVGAGIEDDVVRTAASGLYGRVTSPRGDVPYRVRVHRAADETEETRAAIDLRVSADWTPAPR*
Ga0066809_100107214	3300005168	Soil	MCESAAGGMGDVVYAQVRFNLYRPGEWVTVGAGVEDGVVRVAASGLYGRVTSPRGDLPYRVRVRRAADEMEERRAAIDLRISADWKPAPR*
Ga0066810_100437811	3300005169	Soil	MGDVVYAQVQFNLYRPGDWVTVGAGVEDDVVRASASGLYGRITSPGGDLPYRVRVHRAADELEERRAAIDLRVSADWKPA
Ga0070683_1011580421	3300005329	Corn Rhizosphere	MEDVVYAQAQFNLYRPGEWVTVGAGIQDDVVRQAASGLYGRIASPLGDVPYRVRVHKAADPVEELQAAID
Ga0070680_1006851553	3300005336	Corn Rhizosphere	MGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0070680_1009430713	3300005336	Corn Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQQPTR*
Ga0070682_1000744093	3300005337	Corn Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0070660_1007204681	3300005339	Corn Rhizosphere	VVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0070687_1008701172	3300005343	Switchgrass Rhizosphere	MTPNGGFAAGRDVRACGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLR
Ga0070671_1005398191	3300005355	Switchgrass Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISAEWAPASP*
Ga0070673_1003665703	3300005364	Switchgrass Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0070701_104097882	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISAEWAPASP*
Ga0068867_1003964743	3300005459	Miscanthus Rhizosphere	RFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQQPTR*
Ga0070672_1004144983	3300005543	Miscanthus Rhizosphere	RAIRASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADEMEELQAAIDLRISADWAPASP*
Ga0070704_1016762103	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0070702_1002589063	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MGGMTPNGGFAARRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0068859_1007576103	3300005617	Switchgrass Rhizosphere	FAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGIEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0068861_1012085552	3300005719	Switchgrass Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAANETEELQAAIDLRISADWAPASP*
Ga0068851_101264024	3300005834	Corn Rhizosphere	DVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0068862_1027314321	3300005844	Switchgrass Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAA
Ga0075290_10086401	3300005889	Rice Paddy Soil	AGRLPGPPARRRAIRASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0066652_1002953162	3300006046	Soil	MEDVVYAQAQFNLYRPGEWVTVGAGIEDDVVRAAASGLYGRIASPLGDVPHRVRVHKPVDETDELQAAIDLRISADWPPAPR*
Ga0070712_1006145441	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRVADETEETRAAIDL
Ga0074064_117421122	3300006603	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEEMRAAIDLRISAEWQPPTR*
Ga0074060_120198102	3300006604	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAVDETEETRAAIDLRISAEWQPPTR*
Ga0079222_116237752	3300006755	Agricultural Soil	MEDVVYAQAQFNLYRPGEWVTVGAGIQDDVVRQAASGLYGRIASPLGDVPYRVRVHKAADPVEELQAAIDLRISAVWEPARR*
Ga0075433_101452553	3300006852	Populus Rhizosphere	MGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0075434_1000209449	3300006871	Populus Rhizosphere	MGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISAEWAPASP*
Ga0075434_1020411632	3300006871	Populus Rhizosphere	MDDVVYAQVQFNLYRPGEWVTVGAGIEDEVVRVAASGLYGRIASPLGDVPYRVRVHKAADEAEEVQAAIDLRISADWAPAPR*
Ga0075426_110066253	3300006903	Populus Rhizosphere	YRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISAEWAPASP*
Ga0105240_104989523	3300009093	Corn Rhizosphere	MEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0105245_102200551	3300009098	Miscanthus Rhizosphere	ASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0105245_131585601	3300009098	Miscanthus Rhizosphere	MEDVVYAQAQFNLYRPGEWVTVGAGIQDDVVRQAASGLYGRIASPLGDVPYRVRVHKAADPVEELQAAIDLRISAVWEPVRR*
Ga0105243_122128092	3300009148	Miscanthus Rhizosphere	MEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0111538_101731075	3300009156	Populus Rhizosphere	MEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISAEWAPASP*
Ga0105242_103885751	3300009176	Miscanthus Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRVADETEETRAAI
Ga0126377_135481612	3300010362	Tropical Forest Soil	EAAAGGMEEVVYAQAQFNLYRPGEWVTVGAGIEDEVVRAAASGLYGRIASPRGDVPYRVRVHRADDELEELQAAIDLRISADWAPVPR*
Ga0105246_103027354	3300011119	Miscanthus Rhizosphere	GFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0137367_109731341	3300012353	Vadose Zone Soil	MEDVVFAQVQFNLYRPGEWVTVGAGASDDVVRAAAAGLYGRVVSPGGDVPYRVRVRRTTSEAEDARAGIDLRISAGWAAR*
Ga0164300_103748311	3300012951	Soil	AAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQQPTR*
Ga0164300_108421902	3300012951	Soil	MDEVVYAQVQFNLYRPGDWVTIGAGVRDDVVRASAGGLYGRIVSPGGDLPYRVRVHRAADATEEMRAAIDLRISADWRPATQ*
Ga0164303_100495404	3300012957	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEEMRAAIDLRISAEWQPLTR*
Ga0164301_100483453	3300012960	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRCQRAADETEETRAAIDLRISAEWQQPTR*
Ga0164309_104392261	3300012984	Soil	MEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0164308_102832883	3300012985	Soil	MEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWSPVSP*
Ga0164307_104375842	3300012987	Soil	MEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADEMEELQAAIDLRISADWAPASP*
Ga0164305_105951813	3300012989	Soil	MDEIVYAQVQFNLYRPGEWVTVGAGVKDDVVRASASGLYGRVTSPRGDLPYRVRVHRPADDTEEMRAAIDLRVSADWKPAPP*
Ga0157378_129432953	3300013297	Miscanthus Rhizosphere	VYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQQPTR*
Ga0157375_136334971	3300013308	Miscanthus Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAE
Ga0157377_101313183	3300014745	Miscanthus Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDNVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0157379_101682052	3300014968	Switchgrass Rhizosphere	MTPNGGFAARRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0157376_110301171	3300014969	Miscanthus Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDLVRAAASGLYSRVASPRGDLPYRVRVHRAVDETEETRAAIDLRISAEWQPPTR
Ga0157376_117865571	3300014969	Miscanthus Rhizosphere	MGEIVYAQVRFNPYRPGGWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYCVRVHRAADETEEMRAAIDLRISAEWQPPMR*
Ga0132258_101199997	3300015371	Arabidopsis Rhizosphere	MDDVVYAQVQFNLYRPGEWVTVGAGIEDEVVRVPASGLYGRVASPAGDVPYRVRVHKAADESEELQAAIDLRISAGWETVPR*
Ga0132258_103901124	3300015371	Arabidopsis Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYCVRVHRAADETEEMRAAIDLRISAEWQPPMR*
Ga0132258_115159723	3300015371	Arabidopsis Rhizosphere	MDEVVYAQVQFNLYRPGEWVTIGAGVRDDVVRASASGLYGRIVSPGGDLPYRVRVHRAADETEEMRAAIDLRISADWKPAPP*
Ga0132258_137095113	3300015371	Arabidopsis Rhizosphere	MDDIVYAQVQFNLYRPGEWVTVGAGVKDDVVRASASGLYGRVTSPRGDLPYRVRVHRAADETEEMRAAIDLRVSADWKPAPP*
Ga0132255_1005366671	3300015374	Arabidopsis Rhizosphere	MDDVVYAQVQFNLYRPGEWVTVGAGIEDEVVRVAASGLYGRVASPAGDVPYRVRVHKAVDESEELQAAIDLRISAGWETVPR*
Ga0132255_1015507213	3300015374	Arabidopsis Rhizosphere	GETFAIGNPHPEPFHAVAARARRLPSPPARRRAIRASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP*
Ga0163161_119573321	3300017792	Switchgrass Rhizosphere	MGEIVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0206356_114359342	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0210381_102593201	3300021078	Groundwater Sediment	RNDRPIGGFAPGGDVRGCGRGMDDIVYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0222622_107514923	3300022756	Groundwater Sediment	MDDVVYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0207656_102842201	3300025321	Corn Rhizosphere	YAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0210142_10959232	3300025552	Natural And Restored Wetlands	MEDVVYAQAQFNLYRPGEWVTVGAGIEDDVVRHAASGLYGRIASPLGDAPYRVRVHRIADEFEELQAAIDMRISAGWEPIRR
Ga0207642_105137593	3300025899	Miscanthus Rhizosphere	SAARRSEASGCRSTFHRASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0207647_102288162	3300025904	Corn Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0207693_106516021	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RCLVMRGQVGGAMGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQQPTR
Ga0207660_103729713	3300025917	Corn Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0207662_103151353	3300025918	Switchgrass Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSAASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLR
Ga0207659_108570441	3300025926	Miscanthus Rhizosphere	GGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0207706_111098223	3300025933	Corn Rhizosphere	MGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWEPASP
Ga0207686_102628783	3300025934	Miscanthus Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRVADETEETRAAIDLRISAEWQQ
Ga0207709_112630602	3300025935	Miscanthus Rhizosphere	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQQPTR
Ga0207670_104823823	3300025936	Switchgrass Rhizosphere	NGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISADWAPASP
Ga0207665_112078983	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AGRDVRVCSRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0207691_110905681	3300025940	Miscanthus Rhizosphere	PSSAARRSEASGCRSTFHRASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADEMEELQAAIDLRISADWAPASP
Ga0207651_104952243	3300025960	Switchgrass Rhizosphere	MRGMTPNGGFAAGRDVRACGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISADWARASR
Ga0207677_101706941	3300026023	Miscanthus Rhizosphere	AIRASMGGMTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0207648_101368115	3300026089	Miscanthus Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISAEWAPASP
Ga0207675_1013069802	3300026118	Switchgrass Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAANETEELQAAIDLRISADWAPASP
Ga0207981_10206114	3300027560	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEEMRAAIDLRISADWQPLTR
Ga0209177_101199251	3300027775	Agricultural Soil	GFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVVDDVVRSSASGLYGRIASPLGDVPYQVRVHRAADETEELQAAIDLRISADWAPASP
Ga0268265_125602631	3300028380	Switchgrass Rhizosphere	MTPNGGFAAGRDVRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLR
Ga0247819_105429183	3300028608	Soil	VRVCGRGMEDVVYAQVRFNLYRPGDWVTVGAGVKDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQAAIDLRISADWAPASP
Ga0307276_101886892	3300028705	Soil	MDDIVYAQVQFNLYRPGEWVTIGAGVEDDVVRAAASGLYGRVASPGGDLPYRVRVHRAADETEEARAAIDLRVSADWEPAP
Ga0307298_100643881	3300028717	Soil	APGGDVRGCGRGMDDVVYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0307301_100985601	3300028719	Soil	QSCRWAGARRFRGVSRSYRPGRNDRPIGGFAPGGDVRGCGRGMDDVVYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0307315_100345831	3300028721	Soil	YRPGRNDRPIGGFAPGGDVRGCGRGMDDVVYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0307318_101223061	3300028744	Soil	GMGEIVYAQVQFNLYRPGDWVTIGAGVQDDVVRAAASGLYGRVASPQGDVPYRVRVHRTSDETEEARAAIDLRVSAEWQPAPR
Ga0307320_101861371	3300028771	Soil	VYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0307284_101525652	3300028799	Soil	MDEVVYAQVQFNLYRPGDWVTIGAGVQDDVVRAAASGLYGRVTSPGGDLPYRVRVHRAADETEEARAAIDLRISAEWQPTR
Ga0307284_101589552	3300028799	Soil	MDDVVYAQVQFNLYRPGEWVTMGAGVEDDVVRAASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0307503_105664342	3300028802	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEETRAAIDLRISAEWQPPTW
Ga0307305_102907831	3300028807	Soil	GMDDVVYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0307310_102619101	3300028824	Soil	IPGVSRSYRPGRNDRPIGGFAPGGVVRGCGRGMDDVVYAQVQFNLYRPGEWVTMGAGVEDDVVRAAASGLYGRVASPRGDLPYRVRVHRAANETEETRAAIDLRVSADWKPATP
Ga0307498_102880492	3300031170	Soil	MGEIVYAQVRFNLYRPGDWVTIGAGVDGDVVRAAASGLYSRVASPRGDLPYCVRVHRAADETEETRAAIDLRISAEWQPPTR
Ga0307497_102613353	3300031226	Soil	YRPGDWVTIGAGVDDDVVRAAASGLYSRVASPRGDLPYRVRVHRAADETEEMRAAIDLRISAEWQPLTR
Ga0308175_1006691993	3300031938	Soil	MEDVVYAQAQFNLYRPGEWVTVGAGIQDDVVRQAASGLYGRIASPLGDVPYRVRVHKAADPVEELRAAIDLRISAVWEPVRR
Ga0308175_1011618971	3300031938	Soil	RVSGRAMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQASIDLRISADWAPVSP
Ga0308174_107377662	3300031939	Soil	MEDVVYAQAQFNLYRPGEWVTVGAGIQDDVVRQAASGLYGRIASPLGDVPYRVRVHKATDPVEELQAAIDLRISADWEPVRR
Ga0308176_101039315	3300031996	Soil	MTPNGGFAAGRDVRVSGRAMEDVVYAQVRFNLYRPGDWVTVGAGVEDDVVRSSASGLYGRIASPLGDVPYRVRVHRAADETEELQASIDLRISADWAPVSP
Ga0308176_116555782	3300031996	Soil	MEDVVYAQAQFNLYRPGEWVTVGAGIQDDVVRQAASGLYGRIASPLGDVPYRVRVHKAADPVEEMQAAIDLRISAVWEPVRR
Ga0307470_113512942	3300032174	Hardwood Forest Soil	MDDVVYAQVQFNLYRPGDWVTIGAGVRDDVVRASASGLYGRIASPRGDLPYRVRVHRAADETEEMRAAIDLRISAEWQPPTR
Ga0326726_103430473	3300033433	Peat Soil	MDDVVYAQVQFNLYRPGDWVTVGAGVKDDVARASASGLYGRIVSPRGDLPYRVRVHRAADELEEWRAAIDLRISADWKPAPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083051

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences