Metagenome / Metatranscriptome Family F083037

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F083037
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	51 residues
Representative Sequence	VQNRAWQLGLGADVTVYSKPAALDAAYGDHPVSFQIFLRVRPGLETGGHHH
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.69 %
% of genes from short scaffolds (< 2000 bps)	85.84 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.920 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.274 % of family members)
Environment Ontology (ENVO)	Unclassified (17.699 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.177 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.86% β-sheet: 25.32% Coil/Unstructured: 65.82%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00557	Peptidase_M24	22.12
PF01625	PMSR	18.58
PF13521	AAA_28	3.54
PF01180	DHO_dh	2.65
PF05711	TylF	0.88
PF13505	OMP_b-brl	0.88
PF13088	BNR_2	0.88
PF14344	DUF4397	0.88
PF01712	dNK	0.88
PF02308	MgtC	0.88
PF13474	SnoaL_3	0.88
PF12867	DinB_2	0.88
PF02403	Seryl_tRNA_N	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	18.58
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	2.65
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.65
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	2.65
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.65
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	2.65
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.88
COG1428	Deoxyadenosine/deoxycytidine kinase	Nucleotide transport and metabolism [F]	0.88
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.91 %
Unclassified	root	N/A	7.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.08 %
Unclassified	root	N/A	7.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.65 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.08 %
Unclassified	root	N/A	7.08 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	4.42 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.08 %
Unclassified	root	N/A	7.08 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	4.42 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.77 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.79 %
Unclassified	root	N/A	7.08 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	4.42 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.54 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.77 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.88 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.88 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.79 %
Unclassified	root	N/A	7.08 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	4.42 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.77 %
Roseomonas harenae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	0.88 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01AHZX0	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300000789\|JGI1027J11758_10544254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300000955\|JGI1027J12803_100892997	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300001356\|JGI12269J14319_10016774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5452	Open in IMG/M
3300001356\|JGI12269J14319_10161990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300001546\|JGI12659J15293_10110350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300002245\|JGIcombinedJ26739_100267668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1595	Open in IMG/M
3300002910\|JGI25615J43890_1092896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300004080\|Ga0062385_10268695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	960	Open in IMG/M
3300004080\|Ga0062385_10539410	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300004081\|Ga0063454_101215409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300004092\|Ga0062389_100772008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300004092\|Ga0062389_103006830	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005162\|Ga0066814_10092886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005177\|Ga0066690_10408646	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005344\|Ga0070661_100383234	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005454\|Ga0066687_10114941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1379	Open in IMG/M
3300005458\|Ga0070681_11611636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300005533\|Ga0070734_10149260	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300005538\|Ga0070731_10080769	All Organisms → cellular organisms → Bacteria → Acidobacteria	2155	Open in IMG/M
3300005538\|Ga0070731_10525957	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005602\|Ga0070762_10268334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1066	Open in IMG/M
3300005764\|Ga0066903_103720235	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005764\|Ga0066903_104734974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300005921\|Ga0070766_10245121	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005921\|Ga0070766_10640729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300006028\|Ga0070717_10414256	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300006031\|Ga0066651_10777299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300006050\|Ga0075028_100516105	Not Available	699	Open in IMG/M
3300006175\|Ga0070712_101141785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300006893\|Ga0073928_11192839	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006904\|Ga0075424_102738803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010046\|Ga0126384_10535204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300010329\|Ga0134111_10117772	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010366\|Ga0126379_11878943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300010376\|Ga0126381_103499244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012206\|Ga0137380_10099605	All Organisms → cellular organisms → Bacteria → Acidobacteria	2655	Open in IMG/M
3300012362\|Ga0137361_11811348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300012929\|Ga0137404_10149237	All Organisms → cellular organisms → Bacteria → Acidobacteria	1943	Open in IMG/M
3300014199\|Ga0181535_10600787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	631	Open in IMG/M
3300014495\|Ga0182015_10600153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	698	Open in IMG/M
3300017930\|Ga0187825_10271882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300017932\|Ga0187814_10192031	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300017943\|Ga0187819_10035113	All Organisms → cellular organisms → Bacteria → Acidobacteria	2963	Open in IMG/M
3300017955\|Ga0187817_10677405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300018019\|Ga0187874_10051005	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300018044\|Ga0187890_10268739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300018085\|Ga0187772_10465534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	887	Open in IMG/M
3300018085\|Ga0187772_10657065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300018468\|Ga0066662_10374293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300018468\|Ga0066662_12369622	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300020199\|Ga0179592_10308912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300021168\|Ga0210406_10353863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300021401\|Ga0210393_10240642	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300021403\|Ga0210397_10226000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300021403\|Ga0210397_10614850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300021403\|Ga0210397_10998812	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300021407\|Ga0210383_11562562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300021433\|Ga0210391_10623451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	846	Open in IMG/M
3300021474\|Ga0210390_10517455	Not Available	1004	Open in IMG/M
3300021559\|Ga0210409_11152437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300021560\|Ga0126371_11759135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300022525\|Ga0242656_1006860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1419	Open in IMG/M
3300023250\|Ga0224544_1011431	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300024220\|Ga0224568_1036344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300025915\|Ga0207693_10899782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300026057\|Ga0208294_1000301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3373	Open in IMG/M
3300026121\|Ga0207683_11347696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300026142\|Ga0207698_11366718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300026291\|Ga0209890_10176116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300026322\|Ga0209687_1194963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	627	Open in IMG/M
3300027030\|Ga0208240_1025910	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300027071\|Ga0209214_1028450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300027645\|Ga0209117_1043944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
3300027745\|Ga0209908_10085249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	760	Open in IMG/M
3300027853\|Ga0209274_10107102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1383	Open in IMG/M
3300027867\|Ga0209167_10579961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300028017\|Ga0265356_1019452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300028381\|Ga0268264_10918099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300028552\|Ga0302149_1070551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300028863\|Ga0302218_10303082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300028874\|Ga0302155_10387371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300028906\|Ga0308309_10557137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	993	Open in IMG/M
3300029910\|Ga0311369_10025699	All Organisms → cellular organisms → Bacteria	6874	Open in IMG/M
3300029919\|Ga0302141_1026036	All Organisms → cellular organisms → Bacteria → Acidobacteria	1607	Open in IMG/M
3300030041\|Ga0302274_10093324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1639	Open in IMG/M
3300030524\|Ga0311357_11025149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	724	Open in IMG/M
3300030618\|Ga0311354_10003814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21206	Open in IMG/M
3300030706\|Ga0310039_10103658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1187	Open in IMG/M
3300030746\|Ga0302312_10314144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300030813\|Ga0265750_1084615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	533	Open in IMG/M
3300030878\|Ga0265770_1051099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300031027\|Ga0302308_10559686	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	664	Open in IMG/M
3300031057\|Ga0170834_105723338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300031247\|Ga0265340_10442914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300031573\|Ga0310915_10658846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300031823\|Ga0307478_10250913	All Organisms → cellular organisms → Bacteria → Acidobacteria	1438	Open in IMG/M
3300031859\|Ga0318527_10114509	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300031946\|Ga0310910_10339097	All Organisms → cellular organisms → Bacteria → Acidobacteria	1187	Open in IMG/M
3300031949\|Ga0214473_10217028	All Organisms → cellular organisms → Bacteria → Acidobacteria	2208	Open in IMG/M
3300031962\|Ga0307479_10190909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2017	Open in IMG/M
3300032160\|Ga0311301_12641311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300032782\|Ga0335082_10705183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300032954\|Ga0335083_10104225	All Organisms → cellular organisms → Bacteria → Acidobacteria	2785	Open in IMG/M
3300033158\|Ga0335077_10812196	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300033545\|Ga0316214_1010924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300033829\|Ga0334854_150607	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.27%
Host-Associated	Host-Associated	8.85%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.76%
Aquatic	Environmental → Aquatic	11.50%
Plants	Host-Associated → Plants	8.85%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.26%
Peat	Environmental → Terrestrial → Peat	10.62%
Freshwater	Environmental → Aquatic → Freshwater	9.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.36%
Loam	Environmental → Terrestrial → Soil → Loam	15.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.54%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024220	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026057	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_04376430	2170459017	Switchgrass, Maize And Mischanthus Litter	NKWQLGLGADVTFYSKPSILNASYGSNPVSFQIFLRVRPGRNQHQHSQ
JGI1027J11758_105442541	3300000789	Soil	QSSTWQMGLGADVVFYSKPASLDTAYGNYPVSFQIFLRFRPGKTSGHHSH*
JGI1027J12803_1008929973	3300000955	Soil	GVRELFQNHAWQFGLGADVTFYSKPAVLDVDYGAHPISFRVFLRLRPGLAEHHH*
JGI12269J14319_100167748	3300001356	Peatlands Soil	RDLIQNRAWQLGLGADVIFYSKPAALDSSYGNRPVSFQIFLRMRPGRAEQHHSH*
JGI12269J14319_101619903	3300001356	Peatlands Soil	GLGADVTVYSKPGALDAAYGNHPVSFQIFLRARPGLERPGHAH*
JGI12659J15293_101103502	3300001546	Forest Soil	QLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRVRPGLHTGAHSH*
JGIcombinedJ26739_1002676684	3300002245	Forest Soil	FGGVRDLVQNRAWQLGLGADVTVYSKPAVLDAAYGSYPVSFQIFLRIRPGKQASEHH*
JGI25615J43890_10928962	3300002910	Grasslands Soil	NHAWQLGLGADVIFYSKPSALNPVYGAHPVSFQIFLRLRPGLSHHDHAH*
Ga0062385_102686952	3300004080	Bog Forest Soil	VHDRTWQLGLGSDVTFYSKPAALDAAYGNRPVSFQIFLRMRPGRSQEQHSH*
Ga0062385_105394102	3300004080	Bog Forest Soil	FGGTRDLVQNRAWQLGLGADVTVYSKPAALDAAYGNYPVSFQIFLRVRPGLPEGGHRH*
Ga0063454_1012154092	3300004081	Soil	VGGVRDLVHDSAGQIGLGADVTFYSKPAVLDQFYGTNPVSFSIFLRFRPGSSHMH*
Ga0062389_1007720081	3300004092	Bog Forest Soil	VQNRAWQLGLGADVTVYSKPAALDAAYGDHPVSFQIFLRVRPGLETGGHHH*
Ga0062389_1030068302	3300004092	Bog Forest Soil	FGGVRDLVQNSAWQLGLGADMTIYSKPAVLDAAYGNYPVSFQIFLRVRPRLNSSQHHH*
Ga0066814_100928861	3300005162	Soil	NKAWQMGLGADVTFYSKPGALDAAYGKRPVSFQIFVRLRPGSMSGHQAH*
Ga0066690_104086462	3300005177	Soil	FGGVRDLVHNSHGQIGLGTDVTFYSKPDALTPLYGGHPVSLQVFLRFRPGLAEQHVH*
Ga0070658_105255833	3300005327	Corn Rhizosphere	AGQIGLGADVTFYSKPAVLDQFYGANPVSFSIFLRFRPGSSHMH*
Ga0070661_1003832341	3300005344	Corn Rhizosphere	GGVRDLVHNSAGQIGLGADVTFYSKPAVLDQFYGANPVSFSIFLRFRPGSSHMH*
Ga0066687_101149411	3300005454	Soil	LELGLGADVTFYSKPDALNQAYGDHPVSTKLFLRIRPGLMKH*
Ga0070681_116116361	3300005458	Corn Rhizosphere	RDLVHDSAGQIGLGADVTFYSKPAVLDQFYGSNPVSFSIFLRFRPGSSHMH*
Ga0070734_101492603	3300005533	Surface Soil	RAWQLGLGADVTFYSKPTVLNAAYGERPVSFQIFVRMRPGKSAEHHRN*
Ga0070731_100807691	3300005538	Surface Soil	THAWQLGLGADVTFYSKPGVLDTSYGSNPVSFQVFLRVRPSLSEHRH*
Ga0070731_105259571	3300005538	Surface Soil	GVRDLIQNRAWQLGLGADVTFNSKPGSLDGTYGNNPVSFRIFIRMRPGLAKHIH*
Ga0070732_103861471	3300005542	Surface Soil	LGLGADMTFYSQPALLDSAYGNHPVSFQIFLRMRPGRSHHGHS*
Ga0070762_102683341	3300005602	Soil	VHNRAWQLGLGSDVTFYSKPAVLDAAYGNHPVSFQIFLRMRPGRSGQRASH*
Ga0066903_1037202353	3300005764	Tropical Forest Soil	QNRAWQLGLGADVTFNSKPASLDATYGNNPVSFRIFIRMRPGLATHMH*
Ga0066903_1047349742	3300005764	Tropical Forest Soil	DLVHNRTWQLALRADMTFYSKPAVLNAVYGTNPISFQIFLRMRPGKAADHQMH*
Ga0070766_102451213	3300005921	Soil	RDLVQNRRYQLGLGADVTVYSKPAALDAAYGNYPVSFQIFLRVRPGLNAGGHSH*
Ga0070766_106407292	3300005921	Soil	ACQLGLGADVTIYSKPATLDSSIGNYPVSFQILMRMRPGRSGVRHSH*
Ga0070717_104142563	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RDLIQNRAWQVGLGAAVTLYSKPGLLDPVYGNRPVSFQIFLRMRPGKPEVQHPHGT*
Ga0066651_107772992	3300006031	Soil	NKLWQLALGADVTFYSKPPALNSTYGDNPVSFQVFVRVRPGSGQHH*
Ga0075028_1005161052	3300006050	Watersheds	LWQLALGADVTLYSKPAALDSAYGNRPASFQVFVRARPGASHHAH*
Ga0070712_1011417852	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IQNKAWQMALGADVTFYSKPESLDVAYGNAPVSFQIFVRFRPEKAEGHHTH*
Ga0073928_111928392	3300006893	Iron-Sulfur Acid Spring	RDLVQNSLWQLGLGADVTVYSKPAALDAAYGNHPVSFQVFLRVRPGLSGHQH*
Ga0075424_1027388031	3300006904	Populus Rhizosphere	DSAGQIGLGADVTFYSKPAVLDQFYGSNPVSFSIFLRFRPGSSHMH*
Ga0126384_105352041	3300010046	Tropical Forest Soil	LLYRRLWRLGLGADVTFYSKPAALNAAYGDNPVSFQIFLRVRSGHNDTHSH*
Ga0134111_101177723	3300010329	Grasslands Soil	FGGVRDLVQNHHWQLGLGADMVFYSKPGILDSTYGDRPVSFDVFLRLRPGLSGHRH*
Ga0126379_118789431	3300010366	Tropical Forest Soil	GGVRDVIHERAWQLGVGADMTVYSKPAALDVAYGNFPVSFQIFVRMRPGRTESHHSH*
Ga0126381_1034992442	3300010376	Tropical Forest Soil	QSNTWQMGLGGDVVFYSKPASLDAAYGNYPVSFQIFLRFRPGKMSGHHSH*
Ga0137380_100996055	3300012206	Vadose Zone Soil	LGGERDLGHEHAWQLGLGADVTFHSKPAALDAAYGDRPVSFQIFLRLRPGNDQKGHNH*
Ga0137361_118113481	3300012362	Vadose Zone Soil	TVGGARDLVHNHLWQFALGADVTFYSKPAVLDATYGNNPVSFQIFVRMRPGSAKQHHMR*
Ga0137404_101492373	3300012929	Vadose Zone Soil	LDLIHDHAWQLGLGADVTVYSKPAALDAAYGQYPISFQIFLRARPGKYEMHHSH*
Ga0181535_106007872	3300014199	Bog	RAWQLGLGADVTFYSKPAVLDASYGNNPVSFQIFLRMRPGRSEQKQAH*
Ga0182015_106001531	3300014495	Palsa	VQKRAWQLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRVRPSLLR*
Ga0187825_102718821	3300017930	Freshwater Sediment	DRAWQLGLGADVTFYSKPAALDLAYGDYPVSFQIFLRMRPGRANHGHH
Ga0187814_101920311	3300017932	Freshwater Sediment	DLVHNAAWQLGLGADVTFYSKPSVLDMAYGDHPVSFQVFLRIRPGLSRHSH
Ga0187819_100351136	3300017943	Freshwater Sediment	IQNRAWQLGLGADVTMYSKPAALDAAYRNFPVSFQIFLRLRPGKPDRAHSH
Ga0187817_106774051	3300017955	Freshwater Sediment	YTFGGVRDLIQNRAWQLGMGADVTVYSKPAALNSSYGIRPVSFQIFLRMRPGRSEPHHSH
Ga0187874_100510051	3300018019	Peatland	RDLVQNRAWQLGLGADVTVYSKPAVLDAAYGNFPVSFQIFLRMRPGLHNGEHHH
Ga0187890_102687391	3300018044	Peatland	LGLGADVTVYSKPAVLDATYGNYPVSFQIFLRLRPGGTDQRHTH
Ga0187772_104655342	3300018085	Tropical Peatland	QNQTCQLGLGADVTFYSKPALLDPFYGNNPVSFHVFLRVRPGLRPDAHAM
Ga0187772_106570652	3300018085	Tropical Peatland	QDLIHNRAWQLGLGADLTFYSKPAILDASYGQNPVSFQVFLRMRPGKSTPMHHH
Ga0187769_101011643	3300018086	Tropical Peatland	WQLGLGGDVTVYSKPAVLDAAYGNYPVSFQIFLRVRPGLHPEGHHH
Ga0066662_103742933	3300018468	Grasslands Soil	AVQLGLGADVTFYSKPAVLDSAYGSDPVSFQIFIRLRPGKSGPMHMQ
Ga0066662_123696223	3300018468	Grasslands Soil	LVHNSHGQIGLGADVTFYSKPDVLTPLYGSHPVSLQVFLRFRPGLAEHMH
Ga0179592_103089122	3300020199	Vadose Zone Soil	AYTVGGARDLVHNHLWQFALGADVTFYSKPAVLDATYGNNPVSFQIFVRMRPGSAKQHHM
Ga0210406_103538633	3300021168	Soil	ACQLGLGADVTLYSTLATLDSSFGNYPVWFQILLRMRPGRSGVRQSH
Ga0210393_102406421	3300021401	Soil	GVRDLIQNRAWQLGLGADVTVYSKPAVLDASYGNNPVSFQIFLRMRPGRSQQKRAH
Ga0210397_102260001	3300021403	Soil	IANKTWQVGLGADVTFYSKPGALDAAYGDRPVSFQVFLRFRPAKAPEHHSH
Ga0210397_106148501	3300021403	Soil	HNHVWQLGVGADVTVYSKPAALDAAYGNFPVSFQVFLRMRPGTR
Ga0210397_109988122	3300021403	Soil	HGWQLGLGADVTLYTKPAVLNSAYGEHPVSFQIFLRIRPGASQHGAH
Ga0210386_107847191	3300021406	Soil	LGADVTFYSKPGALDTAYGDRPVSFQIFLRFRPAKAPEHHSH
Ga0210383_115625622	3300021407	Soil	QTRAYQLGLGADLTIYSKPAVLDAAYGNYPVSFQVFLRVRPGRQANGHAH
Ga0210391_106234512	3300021433	Soil	DLVENRAWQLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRVRPGLQASGHPH
Ga0210390_105174551	3300021474	Soil	KWQLGLGADITVYSKPAVLDAAYGNYPVSFQIFLRVRPGLFVEKHSH
Ga0210409_111524371	3300021559	Soil	FGGVRDLIQNRAWQLGLGGDLTFYSKPAALDSSYGNRPVSFQIFLRMRPGRSQQHHSH
Ga0126371_117591351	3300021560	Tropical Forest Soil	QMGLGADLTFYSKHASLDSAYGNSPVSFQVFVRFRPAKTEGHHAH
Ga0242656_10068601	3300022525	Soil	ANKTWQVGLGADVTFYSKPGALDAAYGDRPVSFQVFLRFRPAKAPEHHSH
Ga0224544_10114313	3300023250	Soil	DLVQKRAWQLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRVRPSLLR
Ga0224568_10363442	3300024220	Plant Litter	RDLVQNRAWQLGLGADVTVYSKPAVLDAAYGNFPVSFQIFLRMRPGSHGGGHHH
Ga0207705_106473751	3300025909	Corn Rhizosphere	SAGQIGLGADVTFYSKPAVLDQFYGANPVSFSIFLRFRPGSSHMH
Ga0207693_108997822	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IQNKAWQMALGADVTFYSKPESLDVAYGNAPVSFQIFVRFRPEKAEGHHTH
Ga0208294_10003016	3300026057	Natural And Restored Wetlands	VRDLVQNRIGQVGLGASATFYSKPAALDPVYGNNPVSFSVFLRLRPGRMSH
Ga0207683_113476961	3300026121	Miscanthus Rhizosphere	VRDLVHDSAGQIGLGADVTFYSKPAVLDQFYGANPVSFSIFLRFRPGSSHMH
Ga0207698_113667182	3300026142	Corn Rhizosphere	TVGGVRDLVHDSAGQIGLGADVTFYSKPAVLDQFYGANPVSFSIFLRFRPGSSHMH
Ga0209890_101761161	3300026291	Soil	LIHDRAWQLGLGADVTFYTKPSALDSSYGRNPVSFQIFLRMRPGRAEHSRSEHSH
Ga0209687_11949631	3300026322	Soil	GVRDLIHNENLELGLGADVTFYSKPDALNQAYGDHPVSTKLFLRIRPGLMKH
Ga0208240_10259101	3300027030	Forest Soil	NRAWQLGLGADVTFYSKPAVLDASYGNNPVSFQIFLRMRPGRAEQKQAR
Ga0209214_10284501	3300027071	Forest Soil	VLQSSTWQMGLGADVVFYSKPASLDTAYGNYPVSFQIFLRFRPGKTSGHHSH
Ga0209117_10439441	3300027645	Forest Soil	DRAWQLGLGADVTFYYKPAALDSAYGDHPVSFQIFLRMRPGRANHGHH
Ga0209908_100852491	3300027745	Thawing Permafrost	QNRAWQLGVGADVTVYSKPAALDAAYGNDPVSFQIFLRMRPERSQ
Ga0209274_101071021	3300027853	Soil	GGERDLIHDRAWHLGLGTDVTFYSMPTVLNSAYGVHPVSFQVFLRMRPGLAPEHHGH
Ga0209167_105799612	3300027867	Surface Soil	RDVVQNHTWQLGVGADVTMYSKPAVLDAAYGNFPVSFQVFLRMRPGKSSGQ
Ga0265356_10194521	3300028017	Rhizosphere	YQLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRVRPGLHTGAHSH
Ga0268264_109180991	3300028381	Switchgrass Rhizosphere	HDSAGQIGLGADVTFYSKPAVLDQFYGANPVSFSIFLRFRPGSSHMH
Ga0302149_10705513	3300028552	Bog	AWQLGLGADLTVYSKPAALDAAYGNYPVSFQIFLRMRPGLGGEEHRH
Ga0302218_103030821	3300028863	Palsa	RNGGWRLGLGADVTVYSKPAVLDASYGNYPVSFQIFLRLRPGRPDQQPSH
Ga0302155_103873711	3300028874	Bog	SFGGVRDLVHNRAWQFGVGTDVTIYSKPGALDAAYGNYPVSFEIFLRMRPGLRGVERHP
Ga0308309_105571373	3300028906	Soil	QLGLGADVTVYSKPGVLDAAYGNFPVSFQVFLRIRPGRPASGHAH
Ga0311369_100256991	3300029910	Palsa	TQDHSWRLGLGADVTVYSKPAVLDASYGNYPVSFQIFLRLRPGRPDQQPSH
Ga0302141_10260361	3300029919	Bog	QNHTWQLGLGADVTVYSKPVVLDAAYGNYPVSFQIFLRVRPGISSQHHPH
Ga0302274_100933241	3300030041	Bog	HNRAWQFGVGTDVTIYSKPGALDAAYGNYPVSFEIFLRMRPGLRGVERHP
Ga0311357_110251492	3300030524	Palsa	TRDLVQKRAWQLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRVRPSLLR
Ga0311354_100038141	3300030618	Palsa	GGVRDLVQNQAWQLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRMRPGLHGNEHRH
Ga0310039_101036583	3300030706	Peatlands Soil	AWQLGLGGDMTFYSKPGALDAAYGSHPVSFQIFLRARPALSRQHHAH
Ga0302312_103141441	3300030746	Palsa	GTRDLVQNRAWQLGLGADLTVYSKPAALDAAYGNYPVSFQIFLRMRPGLGGEEHRH
Ga0265750_10846151	3300030813	Soil	HAWQLGLGADVTCYSKPAVLEASYGNHPVSFQIFLRLRPGKSGARHSH
Ga0265770_10510991	3300030878	Soil	RLGLGADVTIYSKPAVLDASYGNYPVSFQIFLRLRPGRPAQPDQQPSH
Ga0302308_105596862	3300031027	Palsa	WQLGVGADVTVYSKPAALDAAYGDFPVSFQIFLRVRPGLRAVGGGQ
Ga0170834_1057233383	3300031057	Forest Soil	RDLVHDRAWQLGLGADVTFYSKPSALDVSYGNHPVSFQIFLRMRPGGSGQHHLH
Ga0265340_104429142	3300031247	Rhizosphere	GVRYLVQERAWQLGLGADVTVYSKPASLDSSFGSYPVSFQIFLRLRPGRSTMHHSH
Ga0310915_106588461	3300031573	Soil	TFGGTRDLVHNKAWQLGLGTDVTFYSKPSALNLTYGDQPVSFQIFLRLRPGMKY
Ga0318576_104755511	3300031796	Soil	QLGLGADVTFNSKPASLDATYGNNPVSFRIFIRMRPGLATHMH
Ga0307478_102509131	3300031823	Hardwood Forest Soil	NRAWQFGVGAAMTIYSKPAVLDAAYGNYPVSFQIFLRMRPGLAGKHHH
Ga0318527_101145091	3300031859	Soil	AYTLGGVRDLVQNRLWQLGLGADVTFYGKPSALDAAYGNNPVSFRLFLRLRPGLSAHHHP
Ga0310910_103390971	3300031946	Soil	QNRAWQLGLGADVTFNSKPASLDATYGNNPVSFRIFIRMRPGLATHMH
Ga0214473_102170284	3300031949	Soil	DLVQNSKMQMGLGAEVTFNSKPASLDAVYGKNPVSFRVFLRFRPGRMEHH
Ga0307479_101909091	3300031962	Hardwood Forest Soil	DLVHNSRGQIGLGADLTFYSKPNVLTPFYGRHPVSVQVFLRFRPGQTDHHMH
Ga0311301_126413111	3300032160	Peatlands Soil	IHDHAWQLGLGGDVTFYSKAAALDAAYGSHPVSFQIFLRARPGRSQHRMR
Ga0335082_107051831	3300032782	Soil	ARDLVQTSRWQMALGADVTVYSKPSALDTAYGDTPVSFQVFLRVRPGSAHHH
Ga0335083_101042251	3300032954	Soil	ATRDLVQNRAWKVGVGADVTFYSKPGVLDSSYGNRPVSFQIFVRVRPRRPNVHHPNGT
Ga0335077_108121961	3300033158	Soil	LGGERDLFRRRLWQVALGSDVTFYSKPSSLDAAYGTSPVSFQIFLRARPGPSHHPQ
Ga0316214_10109241	3300033545	Roots	HDRAWHLGLGTDVTFYSMPTVLNAAYGVHPVSFQVFLRMRPGLAPEHHGH
Ga0334854_150607_419_562	3300033829	Soil	LVQKRAWQLGLGADVTVYSKPAVLDAAYGNYPVSFQIFLRVRPSLLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083037

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences