Basic Information | |
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Family ID | F083032 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 113 |
Average Sequence Length | 50 residues |
Representative Sequence | HEPQWQEEGLRKRLLRVPAAERKQATVLGTGADAVPALIGVFEEWGVLP |
Number of Associated Samples | 98 |
Number of Associated Scaffolds | 113 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 92.92 % |
Associated GOLD sequencing projects | 91 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.44 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (84.956 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.363 % of family members) |
Environment Ontology (ENVO) | Unclassified (46.903 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (43.363 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 19.48% β-sheet: 0.00% Coil/Unstructured: 80.52% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Peatland Soil Sediment Soil Vadose Zone Soil Terrestrial Soil Tropical Forest Soil Grasslands Soil Agricultural Soil Arctic Peat Soil Soil Soil Soil Hardwood Forest Soil Soil Tropical Peatland Tropical Forest Soil Corn, Switchgrass And Miscanthus Rhizosphere Corn Rhizosphere Populus Rhizosphere Corn Rhizosphere Boreal Forest Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI20206J14855_10545432 | 3300001408 | Arctic Peat Soil | QYQPQWQPEGLRTCGLRVPDQPRQQATVLGTGTDAVPALVRLLDELGILK* |
JGI20188J14859_10177921 | 3300001418 | Arctic Peat Soil | VEQYQPQWQPEGLRTCGLRVPDQPRQQATVLGTGTDAVPALVRLLDELGILK* |
JGI20188J14859_10248551 | 3300001418 | Arctic Peat Soil | QPPWQPEGLRMRTLRVPDQPRHEAMVLGTGTDAVPALVRLLDELGVLK* |
Ga0066690_104749252 | 3300005177 | Soil | RPEGLRKQALRVPETERKQATVLGSGVDAVPALVALLDEMGVLP* |
Ga0066388_1030452782 | 3300005332 | Tropical Forest Soil | DEPQWRDDGLRKRILRVPATQRKQATVLGTGADGVPPLVSVLEEWGLLP* |
Ga0070710_104045241 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | QWQPEGLRKLGLRVPETQPHQATVLGTGADAVPALVQLLDELGVLR* |
Ga0070663_1014049782 | 3300005455 | Corn Rhizosphere | HQPQWRPDGLRKQALRVPETERKQATVLGNGEDAVPALLAVLDELGVLP* |
Ga0066903_1006453211 | 3300005764 | Tropical Forest Soil | DDGLRKRILRVPATQRKQATVLGTGADGVPALVGVLEEWGLLP* |
Ga0066903_1039513631 | 3300005764 | Tropical Forest Soil | IERDEPQWRDDGLRKRILRVPATQRKQATVLGTGADGVPALVGVLEEWGLLP* |
Ga0070712_1013107642 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | ERHEPQWQEEGLHKRLLRVPATERKQATVLGAGADAVPALIEVFEEWGVLP* |
Ga0079222_120855921 | 3300006755 | Agricultural Soil | THQPQWRPDGLLKQALRVPETERKQATVLGNGEDAVPALLAVLDELGVLP* |
Ga0075421_1012793932 | 3300006845 | Populus Rhizosphere | EEHRPQWRPDGLRKVALRVPETERKQATVLGTGADAVPALVALLDELGVLP* |
Ga0075435_1012364741 | 3300007076 | Populus Rhizosphere | IERDEPQWRDDGLRKRILRVPATQRQQATVLGAGADGVPALVGVLEEWGLLP* |
Ga0099794_107389901 | 3300007265 | Vadose Zone Soil | RVPVTFVPEGLRMRTLRVPVAGKHSATVLGHGVDAVPGLVRVLGELGVVQ* |
Ga0099828_111997422 | 3300009089 | Vadose Zone Soil | RDEPQWRDDGLRKRSLRVPATQRKQATVLGTGADAVPALVGVLEEWGLLP* |
Ga0116138_11773791 | 3300009552 | Peatland | WRPEGLRKRALRVPDQPRQQATVLGTGTDAVPALVRLLDELGVLR* |
Ga0126374_107435522 | 3300009792 | Tropical Forest Soil | RHEPQWQEEGLRKRLLRVPAAERKQATVLGTGADAVPALIGVFEEWGVLP* |
Ga0126374_109946431 | 3300009792 | Tropical Forest Soil | DDGLRKRSLRVPATQRKQAIVLGTGADGVPALVGVLEEWGLLP* |
Ga0126374_112981252 | 3300009792 | Tropical Forest Soil | RYEPQWQEEGLRKRSLRVPAAERKQATVLGTGADAVPALIGVLEEWGVLP* |
Ga0126373_131304631 | 3300010048 | Tropical Forest Soil | LRAKRAVIESHQPQWQPDGLRKEALRVPETEKKQAAVLGTGVDAVPALMAVLDELGVLP* |
Ga0127503_100932424 | 3300010154 | Soil | AAIETHQPQWRPDGLRKQALRVPETERKQATVLGNGEDAVPALLAVLDELGVLP* |
Ga0134065_104947422 | 3300010326 | Grasslands Soil | AKRAVIEEQRPQWRPDGLRKVALRVPETERKQATVLGTGADAVPALVALLDELGVLP* |
Ga0126370_114947282 | 3300010358 | Tropical Forest Soil | RAKRAVIERYEVTWRDEAMRKQALRVPATERKQAEVLGTGADAVPALMRVLEEWGVLP* |
Ga0126376_104363582 | 3300010359 | Tropical Forest Soil | WHEPQWQDEGLRKRLLRVPAAERKQATVLGTGADAVPALIGVFEEWGVLP* |
Ga0126378_115217052 | 3300010361 | Tropical Forest Soil | WQEEGLRKRLLQVPAAERKQATVLGTGADAVPALIEVFAEWGILP* |
Ga0126377_109622022 | 3300010362 | Tropical Forest Soil | GRLRAKRAEIERHEPQWQEEGLHKRLLRVPATERKQATVLGTGADAVPALVGVFEEWGVLP* |
Ga0126379_113047651 | 3300010366 | Tropical Forest Soil | THQPQWRPDGLRKQALRVPETERKQATVLGTGVDAVPALVTVLDELGVLP* |
Ga0126379_128744162 | 3300010366 | Tropical Forest Soil | RLRAKRAEIERHEPQWQEEGLSKRLLRVPATERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0134125_100348636 | 3300010371 | Terrestrial Soil | RAAIEAHQPQWRPDGLRKQALRVPETERKQATVLGNGEDAVPALLAVLDELGVLP* |
Ga0126383_106926852 | 3300010398 | Tropical Forest Soil | ADGLRKTGLRVPAERRQQATVLGSGPDAVPALVRMLEELGVLR* |
Ga0126383_111913122 | 3300010398 | Tropical Forest Soil | PDGLRKQALRVPETERKQATVLGNGVDAVPALVTLLDELGVLP* |
Ga0126383_136695451 | 3300010398 | Tropical Forest Soil | AKRAEIERHEPQWQEEGLHKRLLRVPATERKQATVLGTGADAVPALVGVFEEWGVLP* |
Ga0126347_11472332 | 3300010867 | Boreal Forest Soil | IEQYQPPWQPEGLRMRGLRVPDQPRHEATVLGTGADAVPALIRLLDELGVLK* |
Ga0137776_17426081 | 3300010937 | Sediment | GRLRAKRAVIERHEPVWQDEGLRKQVLRVPETERKQAEVLGTGADAVPALMRVLDEWGVLP* |
Ga0137370_103400302 | 3300012285 | Vadose Zone Soil | RWRPDGLRKQALRVPATERKQATVLGNGVDAVPALVTLLGEMGVLP* |
Ga0137413_106352621 | 3300012924 | Vadose Zone Soil | QPPWQPEGLRMRALRVPDQPRHEATVLGTGTDAVPALVRLLDELGVLK* |
Ga0137413_108862591 | 3300012924 | Vadose Zone Soil | NYQPQGQPEGLRKLALRVPEQPRQQATVLGTGTDAVPALVRLLDELGVLK* |
Ga0126369_115328321 | 3300012971 | Tropical Forest Soil | EEGLRKRLLRVPGAERKQATVLGTGADTVPALVGVFEEWGVLP* |
Ga0137403_109573621 | 3300015264 | Vadose Zone Soil | QWQPEGLRKLALRVPEQPRQQATVLGTGTDAVPALVRLLDELGVLK* |
Ga0182041_115096912 | 3300016294 | Soil | LRAKRAVIERHEPAWHDEGMHKEALRVPAAERKQAEVLGAGADAVPALMRVLEEWGLLS |
Ga0182033_116886021 | 3300016319 | Soil | AKRAEIERHEPQWQEEGLRKRLLRVPAAEQKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0182032_111177662 | 3300016357 | Soil | AEIERHEPEWQEEGLRKRLLRVPATERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0182037_109745442 | 3300016404 | Soil | RLRAKRAVIERHEPAWQDEGMHKQALRVPAAERKQAEVLGTGADAVPALMRVLEEWGLLQ |
Ga0187779_102810982 | 3300017959 | Tropical Peatland | AVIEEHQPPWQPDGLRKQALRVPETERKQATVLGTGADAVPALLALLDELGVLP |
Ga0187767_103725181 | 3300017999 | Tropical Peatland | PDGLRKQALRVPETERKQATVLGTGADAVPALLTLLDELGVLP |
Ga0210399_116131891 | 3300020581 | Soil | AVIEQHQPQWQPEGLRKLGLRVPETQPHQATVLGTGADAVPALVQLLDELGVLR |
Ga0210388_113395011 | 3300021181 | Soil | VVEQYQPQWQPEGLRKRALRVPEQPRQQATVLGTGTAAVPALVQLLDELGVLK |
Ga0210393_115818432 | 3300021401 | Soil | LRKRSLRVPATQRKQATVLGTGADAVPALVGVLEEWGLLP |
Ga0210387_107468091 | 3300021405 | Soil | WQPEGLRKLGLRVPETQPHQATVLGTGADAVPALVQLLDELGVLR |
Ga0210383_101154934 | 3300021407 | Soil | TWQNEGMRKQALRVPAAERKQAEVLGTGADAVPALMRVLEEWGVLP |
Ga0210394_113164711 | 3300021420 | Soil | AIERDEPQWRDDGLRKLSLRVPATQRKQATVLGTGADAVPALVGVLEEWGLLP |
Ga0126371_109767901 | 3300021560 | Tropical Forest Soil | IETHQPQWRPDGLRKQALRVPETERKQATVLGDGVDAVPALLTVLDELGVLP |
Ga0208219_10632812 | 3300025625 | Arctic Peat Soil | QPPWQPEGLRMRTLRVPDQPRHEAMVLGTGTDAVPALVRLLDELGVLK |
Ga0208357_10562151 | 3300025703 | Arctic Peat Soil | WQPEGLRMRGLRVPDQPRHEATVLGTGADAVPALIRLLDELGVLK |
Ga0207692_111088292 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | EPQWQPEGLRKQALRVPEDTHQQATVLGTGADAVPALVALLDELGILR |
Ga0207685_105223922 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | QPQWRPDGLRKQALRVPETERKQATVLGNGEDAVPALLAVLDELGVLP |
Ga0207693_104702681 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | PEGLRKLALRVPEQPRQQATVLGTGTDAVPALVRLLDELGVLK |
Ga0207693_110280861 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | EGLRKRMLRVPATERKQATVLGAGADAVPALIEVFEEWGVLP |
Ga0207640_112828581 | 3300025981 | Corn Rhizosphere | IEQYEPQWQPEGLRKQALRVPEDTHQQATVLGTGADAVPALVALLDELGILR |
Ga0179587_104632032 | 3300026557 | Vadose Zone Soil | AVIETHQPQWRPDGLRKQALRVPETERKQATVLGNGVDAVPALLTLLDEMGVLP |
Ga0209178_11001021 | 3300027725 | Agricultural Soil | GLRKRMLRVPATEREQATVLGTGADAVPALIGVFEEWGVLP |
Ga0307305_104962771 | 3300028807 | Soil | LRAKRAVIEEHRPQWRPDGLRKVALRVPETERKQATVLGTGADAVPALVALLDELGVLP |
Ga0318516_101418201 | 3300031543 | Soil | LRAKRAEIERHEPQWQEEGLRKRLLRVPATERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318516_108803061 | 3300031543 | Soil | PQWQEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318534_100635591 | 3300031544 | Soil | RAVIEQHEPQWQGEGLRKRSLRVPATHRRQATVLGTGADAVPALLGVLDEWGVLP |
Ga0318515_104975941 | 3300031572 | Soil | EPQWRDDGLRKRSLRVPATQRKQATVLGTGADGVPALVGVLEEWGLLP |
Ga0310915_107877601 | 3300031573 | Soil | EHEPQWQEEGLRKRSLRVPVTQRRQATVLGTGADAVPALLGVLDEWGVLP |
Ga0318574_100551961 | 3300031680 | Soil | VIEQHEPQWQGEGLRKRSLRVPATHRRQATVLGTGADAVPALLGVLDEWGVLP |
Ga0318572_102687371 | 3300031681 | Soil | EGLRKQALRVPATERKQATVLGTGADAVPALVRVLEEWGVLP |
Ga0318572_103737091 | 3300031681 | Soil | RAEIERHEPQWQEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318496_103065961 | 3300031713 | Soil | HEPVWQDEGLRKQALRVPATERKHATVLGTGADAVPALLRVLDEWGVLP |
Ga0306917_100977703 | 3300031719 | Soil | QWQEEGLRKRLLRVPAAERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318493_101863132 | 3300031723 | Soil | WAEIERHEPQWQEEGLHKRLLRVPAAEPKQATVLGTGADAVPALVGVFEEWGVLP |
Ga0318493_108009971 | 3300031723 | Soil | EPQWHDDGLRKRRLRVPATQRKQATVLGTGADGVPALVGVLEEWGLLP |
Ga0318494_101832962 | 3300031751 | Soil | EPLWQEEGLHKRLLRVPAAEPKQATVLGTGADAVPALVGVFEEWGVLP |
Ga0318521_104117632 | 3300031770 | Soil | KRAEIERHEPQWLEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318547_100259531 | 3300031781 | Soil | EGLRKRSLRVPATHRRQATVLGTGADAVPALLGVLDEWGVLP |
Ga0318547_105574332 | 3300031781 | Soil | GRLRAKRAVIERHEPAWQDEGLHKRALRVPEADRKQAEVLGAGADAVPALMRVLEEWGVL |
Ga0318557_104735952 | 3300031795 | Soil | QEEGRHKRLLGVPAAEPKQATVLGTGADAVPALVGVFEEWGVLP |
Ga0318568_106240261 | 3300031819 | Soil | AEIEAHEPQWQEEGLRKRSLRVPVAERKQATVLGTGADAAPALIGVFEEWGVLP |
Ga0307478_105992051 | 3300031823 | Hardwood Forest Soil | WQEDGLRKQVLRVPATERRQAEVLGTGADAVPALMRVLDEWGVLP |
Ga0318517_102596621 | 3300031835 | Soil | QWQEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318512_101397251 | 3300031846 | Soil | PQWQEEGLRKRLLRVPAAERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318527_101501812 | 3300031859 | Soil | EPQWQEEGLHKRLLRVPAAEPKQATVLGTGADAVPALVGVFEEWGVLP |
Ga0318522_102030342 | 3300031894 | Soil | HEPPWQEEGLRKRLLRVPESERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318551_104182802 | 3300031896 | Soil | WQEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318520_106440541 | 3300031897 | Soil | PGRLRAKRAVIEQHEPQWQGEGPRKRSLRVPATHRRQATVLGTGADAVPALLGVLDEWGVLP |
Ga0306923_114154941 | 3300031910 | Soil | QWQEEGQRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0306921_110682802 | 3300031912 | Soil | IERHEPQWQEEGLRKRLLRVPATERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0310916_105529951 | 3300031942 | Soil | PQWQEEGLRKRLLRVPAAEQKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0310913_103319911 | 3300031945 | Soil | EGLRKQSLRVPATQRKQATVLGTGADAVPALLGVLDEWGVLP |
Ga0310909_113520211 | 3300031947 | Soil | ERHEPQWQEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0306926_128215531 | 3300031954 | Soil | NEPQWRDDGLRKRSLRVPATQRKQATVLGTGADGVPALVGVLEEWGLLP |
Ga0306922_100545295 | 3300032001 | Soil | RAVIERHEPAWQDEGLHKRALRVPEADRKQAEVLGAGADAVPALMRVLEEWGVLP |
Ga0306922_108897322 | 3300032001 | Soil | PQWQEEGLRKQSLRVPATQRKQATVLGTGADAVPALLGVLDEWGVLP |
Ga0318562_105095271 | 3300032008 | Soil | TIERDEPQWRDDGLRKRILRVPATQRKQATVLGTGADGVPALVGVLEEWGLLP |
Ga0318569_104455262 | 3300032010 | Soil | QWQGEGPRKRSLRVPATHRRQATVLGTGADAVPALLGVLDEWGVLP |
Ga0318507_103495272 | 3300032025 | Soil | LRAKRAVIETHQPQWRPEGLRKQALRVPETERKQATVLGDGVDAVPALLTLLDELGVLP |
Ga0310911_105222901 | 3300032035 | Soil | HEPQWQEEGLRKRLLRVPAAERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318559_102202042 | 3300032039 | Soil | VIEEHEPQWQEEGLRKQSLRVPATQRKQATVLGTGADAVPALLGVLDEWGVLP |
Ga0318545_101659342 | 3300032042 | Soil | RHEPQWQEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318558_100090225 | 3300032044 | Soil | AEIERHEPQWQEEGLRKRLLRVPATERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318570_102209522 | 3300032054 | Soil | RHEPPWLEEGLRKRLLRVPAAERKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318510_105548312 | 3300032064 | Soil | RAEIERHEPQWQEEGLRKRLLRVPAAEQKQATVLGTGTDAVPALIGVFEEWGVLP |
Ga0318513_100632182 | 3300032065 | Soil | EGLRKRLLRVPESERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318524_107316392 | 3300032067 | Soil | QEEGLRKRSLRVPVAERKQATVLGTGADAAPALIGVFEEWGVLP |
Ga0318553_105340632 | 3300032068 | Soil | LRAKRAEIERHEPQWQEEGLRKRLLRVPAAERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318525_103148942 | 3300032089 | Soil | DEGLRKQALRVPATERKHATVLGTGADAVPALLRVLDEWGVLP |
Ga0318525_106993251 | 3300032089 | Soil | RAVIERDEPQWRDDGLRKRSLRVPATQRKQATVLGTGADGVPALVGVLEEWGLLP |
Ga0318518_103632901 | 3300032090 | Soil | PPWQEEGLRKRLLRVPESERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0335083_108330302 | 3300032954 | Soil | KRAVIETHQPQWRPDGLRKQALRVPETERKQAAVLGTGVDAVPALVSLLDELGVLP |
Ga0310914_103277643 | 3300033289 | Soil | ERHEPQWQEERLRKRLLKVPATERKQATVLGTGADAVPALIGVFEEWGVLP |
Ga0318519_102455551 | 3300033290 | Soil | AEIERHEPPWQEEGLRKRLLRVPESERKQATVLGTGADAVPALIGVFEEWGVLP |
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