Metagenome / Metatranscriptome Family F083021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083021
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	90 residues
Representative Sequence	VPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENLDHIFLVPSYSSERIT
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.68 %
% of genes near scaffold ends (potentially truncated)	32.74 %
% of genes from short scaffolds (< 2000 bps)	78.76 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (11.504 % of family members)
Environment Ontology (ENVO)	Unclassified (23.894 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.053 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 35.29% Coil/Unstructured: 64.71%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02353	CMAS	7.96
PF00890	FAD_binding_2	7.08
PF13414	TPR_11	6.19
PF00206	Lyase_1	3.54
PF12787	EcsC	3.54
PF12847	Methyltransf_18	1.77
PF03167	UDG	1.77
PF13534	Fer4_17	1.77
PF01257	2Fe-2S_thioredx	0.88
PF13531	SBP_bac_11	0.88
PF12836	HHH_3	0.88
PF03030	H_PPase	0.88
PF13181	TPR_8	0.88
PF02300	Fumarate_red_C	0.88
PF13659	Obsolete Pfam Family	0.88
PF00041	fn3	0.88
PF09084	NMT1	0.88
PF02754	CCG	0.88
PF13847	Methyltransf_31	0.88
PF10415	FumaraseC_C	0.88
PF00860	Xan_ur_permease	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	7.96
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	7.96
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	7.96
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.77
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.77
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	1.77
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.88
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.88
COG1905	NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)	Energy production and conversion [C]	0.88
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.88
COG3029	Fumarate reductase subunit C	Energy production and conversion [C]	0.88
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.88
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	77.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	77.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	74.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	74.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_1199395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	889	Open in IMG/M
2228664022\|INPgaii200_c0902183	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
2228664022\|INPgaii200_c1193635	All Organisms → cellular organisms → Bacteria	7080	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1855961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300000550\|F24TB_10461705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1532	Open in IMG/M
3300000559\|F14TC_100128358	All Organisms → cellular organisms → Bacteria	3845	Open in IMG/M
3300001431\|F14TB_101120119	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300002899\|JGIcombinedJ43975_10021711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1032	Open in IMG/M
3300003911\|JGI25405J52794_10021909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1293	Open in IMG/M
3300003987\|Ga0055471_10124378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300003987\|Ga0055471_10223228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300003993\|Ga0055468_10074535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	913	Open in IMG/M
3300003998\|Ga0055472_10011270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1756	Open in IMG/M
3300004013\|Ga0055465_10168048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300004019\|Ga0055439_10299069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300004070\|Ga0055488_10214029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300004145\|Ga0055489_10146231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300004281\|Ga0066397_10022305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	954	Open in IMG/M
3300004463\|Ga0063356_104346932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300004479\|Ga0062595_101644918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300005174\|Ga0066680_10173945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1355	Open in IMG/M
3300005186\|Ga0066676_10903954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300005289\|Ga0065704_10006138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2976	Open in IMG/M
3300005294\|Ga0065705_11074823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300005332\|Ga0066388_100002707	All Organisms → cellular organisms → Bacteria	11028	Open in IMG/M
3300005332\|Ga0066388_104198778	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300005332\|Ga0066388_106067135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300005445\|Ga0070708_100292021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1535	Open in IMG/M
3300005713\|Ga0066905_100164553	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300005713\|Ga0066905_100771235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300005937\|Ga0081455_10221198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1403	Open in IMG/M
3300006058\|Ga0075432_10047442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1510	Open in IMG/M
3300006175\|Ga0070712_101576944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300006797\|Ga0066659_11018655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300006880\|Ga0075429_100816572	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	816	Open in IMG/M
3300006904\|Ga0075424_100588387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1188	Open in IMG/M
3300009012\|Ga0066710_100586198	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300009081\|Ga0105098_10669413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300009137\|Ga0066709_101440156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	999	Open in IMG/M
3300009157\|Ga0105092_10226789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1047	Open in IMG/M
3300009162\|Ga0075423_10287343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1723	Open in IMG/M
3300009162\|Ga0075423_11853015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300009168\|Ga0105104_10957583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300009597\|Ga0105259_1072259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791	Open in IMG/M
3300009610\|Ga0105340_1351355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300009801\|Ga0105056_1009857	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1058	Open in IMG/M
3300009807\|Ga0105061_1013957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1028	Open in IMG/M
3300009815\|Ga0105070_1049540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300010043\|Ga0126380_10294283	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1151	Open in IMG/M
3300010043\|Ga0126380_10378164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1043	Open in IMG/M
3300010043\|Ga0126380_11275068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300010046\|Ga0126384_10044255	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300010046\|Ga0126384_10770884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300010047\|Ga0126382_11296327	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300010047\|Ga0126382_11366073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300010154\|Ga0127503_11009462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300010358\|Ga0126370_10138961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1753	Open in IMG/M
3300010359\|Ga0126376_12247880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300010360\|Ga0126372_10265505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1484	Open in IMG/M
3300010360\|Ga0126372_10659321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1014	Open in IMG/M
3300010362\|Ga0126377_10071893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3080	Open in IMG/M
3300011403\|Ga0137313_1045935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300011416\|Ga0137422_1045105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1054	Open in IMG/M
3300012204\|Ga0137374_10817256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300012353\|Ga0137367_10144574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1737	Open in IMG/M
3300012510\|Ga0157316_1072021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300012582\|Ga0137358_10014578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4965	Open in IMG/M
3300012685\|Ga0137397_10129649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1861	Open in IMG/M
3300012948\|Ga0126375_11121939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300012955\|Ga0164298_10707085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300014270\|Ga0075325_1027775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1104	Open in IMG/M
3300014272\|Ga0075327_1122042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300014320\|Ga0075342_1034319	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1201	Open in IMG/M
3300015053\|Ga0137405_1292874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	774	Open in IMG/M
3300016404\|Ga0182037_10739955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300018028\|Ga0184608_10058599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1536	Open in IMG/M
3300018053\|Ga0184626_10011337	All Organisms → cellular organisms → Bacteria	3502	Open in IMG/M
3300018072\|Ga0184635_10027995	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300018072\|Ga0184635_10079117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
3300018076\|Ga0184609_10160470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1038	Open in IMG/M
3300018081\|Ga0184625_10252479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	923	Open in IMG/M
3300018081\|Ga0184625_10484131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300018084\|Ga0184629_10084222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1528	Open in IMG/M
3300018089\|Ga0187774_11002572	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300021073\|Ga0210378_10237739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300025796\|Ga0210113_1052542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300027056\|Ga0209879_1028633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300027513\|Ga0208685_1000592	All Organisms → cellular organisms → Bacteria	12486	Open in IMG/M
3300027577\|Ga0209874_1000587	All Organisms → cellular organisms → Bacteria	10830	Open in IMG/M
3300027646\|Ga0209466_1000554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7758	Open in IMG/M
3300027654\|Ga0209799_1000336	All Organisms → cellular organisms → Bacteria	8561	Open in IMG/M
3300027654\|Ga0209799_1039225	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300027873\|Ga0209814_10000495	All Organisms → cellular organisms → Bacteria	12982	Open in IMG/M
3300027874\|Ga0209465_10036555	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300027907\|Ga0207428_10108699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2136	Open in IMG/M
3300027909\|Ga0209382_10011398	All Organisms → cellular organisms → Bacteria	11036	Open in IMG/M
3300030006\|Ga0299907_10763458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300031720\|Ga0307469_10009493	All Organisms → cellular organisms → Bacteria	4664	Open in IMG/M
3300031740\|Ga0307468_100406594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1041	Open in IMG/M
3300031744\|Ga0306918_11371554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300031890\|Ga0306925_11806304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300031941\|Ga0310912_10589800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300031946\|Ga0310910_10699925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	801	Open in IMG/M
3300032180\|Ga0307471_101401231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300032180\|Ga0307471_103383621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300033551\|Ga0247830_10045811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2839	Open in IMG/M
3300034115\|Ga0364945_0002114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5482	Open in IMG/M
3300034149\|Ga0364929_0011088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2488	Open in IMG/M
3300034150\|Ga0364933_152760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300034354\|Ga0364943_0001175	All Organisms → cellular organisms → Bacteria	7475	Open in IMG/M
3300034417\|Ga0364941_013212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1590	Open in IMG/M
3300034817\|Ga0373948_0148560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.73%
Host-Associated	Host-Associated	13.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.95%
Aquatic	Environmental → Aquatic	24.78%
Plants	Host-Associated → Plants	13.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.52%
Sediment	Environmental → Aquatic → Sediment	12.39%
Marine	Environmental → Aquatic → Marine	7.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.31%
Freshwater	Environmental → Aquatic → Freshwater	4.42%
Floodplain	Environmental → Terrestrial → Floodplain	4.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.28%
Loam	Environmental → Terrestrial → Soil → Loam	13.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.39%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.08%
Sand	Environmental → Terrestrial → Soil → Sand	4.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	4.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.08%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.42%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	7.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.42%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	4.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0652.00007790	2162886007	Switchgrass Rhizosphere	VPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVPSYSSERIT
INPgaii200_09021833	2228664022	Soil	VPQYDIYVRCSECGAVHPMRIRVHLDDGPVEKQSITETYRGKTRPPQLQAIDGHKTLCLKTGRMFVQGNLDHIFLVPSYSSERIT
INPgaii200_11936354	2228664022	Soil	VPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENLDHIFLVPSYSSERIT
ICChiseqgaiiDRAFT_18559611	3300000033	Soil	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPXLQAIDGXKTLCLKTGRMFIQXNXDHIFLVPSYSSERIT*
F24TB_104617052	3300000550	Soil	MLTSPYLCAKVGLEKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
F14TC_1001283583	3300000559	Soil	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
F14TB_1011201193	3300001431	Soil	MLTRPYLCAKVGLEKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
JGIcombinedJ43975_100217111	3300002899	Soil	VPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQI
JGI25405J52794_100219092	3300003911	Tabebuia Heterophylla Rhizosphere	VPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0055471_101243781	3300003987	Natural And Restored Wetlands	VPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQR
Ga0055471_102232281	3300003987	Natural And Restored Wetlands	VPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISETYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQR
Ga0055468_100745351	3300003993	Natural And Restored Wetlands	VPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHD
Ga0055472_100112701	3300003998	Natural And Restored Wetlands	VPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQRGL*
Ga0055465_101680481	3300004013	Natural And Restored Wetlands	DVDRPSTIRHSRSNNWRGGLTVPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQRGL*
Ga0055439_102990691	3300004019	Natural And Restored Wetlands	MRIRVHLDNGPLEKQSIAETYPGTTRPPQLQAIDGHKTLCLKTGRMFVQKDHDHIFLVPSYSSERIT*
Ga0055488_102140291	3300004070	Natural And Restored Wetlands	VPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEVYRGKTRPPQLQAVDGHKVLCLKTGRMFVQDRHDQVFLVPSYSSQRGL*
Ga0055489_101462311	3300004145	Natural And Restored Wetlands	NWRGGLTVPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQRGL*
Ga0066397_100223052	3300004281	Tropical Forest Soil	VPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0063356_1043469321	3300004463	Arabidopsis Thaliana Rhizosphere	VPQYEIYVVCSECGAEHPMRIRLHLDDGPVEKRSVGATYKDRQRPPQLMAIDGHKTLCLKTGRMFVQENHDLIFLAPRWT*
Ga0062595_1016449181	3300004479	Soil	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENLDHIFLVPSYSSERIT*
Ga0066680_101739452	3300005174	Soil	VPQYDIYVRCSECGAVHPMRIRVHLDDGPVEKQSITVTYRGKTRPPQLQAIDGHKTLCLKTGRMFVQGNLDHIFLVPSYSSERIT*
Ga0066676_109039541	3300005186	Soil	VLLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYS
Ga0065704_100061383	3300005289	Switchgrass Rhizosphere	MRHSRIRKGGPPVPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVPSYSSERIT*
Ga0065705_110748231	3300005294	Switchgrass Rhizosphere	VPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVPSYSSERIT*
Ga0066388_1000027077	3300005332	Tropical Forest Soil	MGLMLTGPHLCATVGLEGGLPVPQYDIYVRCVECDAVHPMRIRIHLDNGPMEKQSIGETFRGRMRPPQLQAIEGHKTLCLKTGRMFIQEDHNQIFLVPSYSSERIT*
Ga0066388_1041987781	3300005332	Tropical Forest Soil	VPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGKMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0066388_1060671352	3300005332	Tropical Forest Soil	MAIMLTGPHLCARVGLEKGGLPVPQYDIYVRCIECDAVHPMRIRIHLDNGPMERQSIAETYRGRARPPQLQAIEGHKTLCLKTGRMFIQEDHNQIFLVPSYSSERIT*
Ga0070708_1002920212	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPQYDIYVRCSECGAVHPMRIRVHLDDGPVEKQSITETYRGKTRPPQLQAIDGHKTLCLKTGRMFVQGNLDHIFLVPSYSSERIT*
Ga0066905_1001645532	3300005713	Tropical Forest Soil	AAVHPMRIRIHLDNGPLEKQSIAETYQGRMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0066905_1007712352	3300005713	Tropical Forest Soil	MRHSRIRKGGPPVPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVPSYS
Ga0081455_102211982	3300005937	Tabebuia Heterophylla Rhizosphere	VPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVPSYSSERFT*
Ga0075432_100474422	3300006058	Populus Rhizosphere	MLTSPYLCAKVGLEKGGLAVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
Ga0070712_1015769442	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PMRIRVHLDDGPVEKQSITETYRGKTRPPQLQAIDGHKTLCLKTGRMFVQGNLDHIFLVPSYSSERIT*
Ga0066659_110186551	3300006797	Soil	MLTRAYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYLGTTRPPQLQAIDGHKTLCLKTGRMFIQENQDHIFLVPSYSSERIT*
Ga0075429_1008165722	3300006880	Populus Rhizosphere	MLTSPYLCAKVGLEKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFL
Ga0075424_1005883871	3300006904	Populus Rhizosphere	YVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
Ga0066710_1005861982	3300009012	Grasslands Soil	MLTRAHLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSISETYLGTTRPPQLQAIDGHKTLCLKTGRMFIQENQDHIFLVPSYSSERIT
Ga0105098_106694132	3300009081	Freshwater Sediment	MRHSRVRKGGLPVPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVP
Ga0066709_1014401561	3300009137	Grasslands Soil	YDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYLGTTRPPQLQAIDGHKTLCLKTGRMFIQENQDHIFLVPSYSSERIT*
Ga0105092_102267892	3300009157	Freshwater Sediment	MRHSRIRNGGPPVPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVPSYSSERIT*
Ga0075423_102873431	3300009162	Populus Rhizosphere	VPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
Ga0075423_118530151	3300009162	Populus Rhizosphere	GAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENLDHIFLVPSYSSERIT*
Ga0105104_109575831	3300009168	Freshwater Sediment	PLERAATECRVDQPSSMRHSRIRKGGPPVPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENRDHIFLVPSYSSERIT*
Ga0105259_10722592	3300009597	Soil	VPQYDIYALCTECGAVHPMRIRIHLDEGPVEKQSMSEIYRGKTRPPQLQALDGHKVLCLKTGRMFVQESHEQVFLVPSYSSQRGL*
Ga0105340_13513552	3300009610	Soil	ECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT*
Ga0105056_10098572	3300009801	Groundwater Sand	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGKTRPPQLQAIDGHKTLCLKTGRMFIQGNHDHIFLVPSYSSERIT*
Ga0105061_10139571	3300009807	Groundwater Sand	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGKTRPPQLQALDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT*
Ga0105070_10495401	3300009815	Groundwater Sand	NKLDVMLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGKTRPPQLQALDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT*
Ga0126380_102942832	3300010043	Tropical Forest Soil	MRIRIHLDNGPLEKQSIAETYQGRMRPPQLQAIEGHKTLCLKTGRMFVQENHNLIFLVPSYSSERIT*
Ga0126380_103781642	3300010043	Tropical Forest Soil	CVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0126380_112750681	3300010043	Tropical Forest Soil	PHLCATVGLEGGLPVPQYDIYVRCVECDAVHPMRIRIHLDNGPMEKQSIGETFRGRMRPPQLQAIEGHKTLCLKTGRMFIQEDHNQIFLVPSYSSERIT*
Ga0126384_100442551	3300010046	Tropical Forest Soil	IYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0126384_107708841	3300010046	Tropical Forest Soil	MRIRIHLDNGPLEKQSIAETYQGKMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0126382_112963271	3300010047	Tropical Forest Soil	QYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0126382_113660732	3300010047	Tropical Forest Soil	QYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0127503_110094622	3300010154	Soil	QYDIYVRCNQCGAVHPMRIRVHLDDGPVEKQSITETYRGKTRPPQLQAIDGHKTLCLKTGRMFVQENLDHIFLVPSYSSERIT*
Ga0126370_101389611	3300010358	Tropical Forest Soil	VPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPS
Ga0126376_122478801	3300010359	Tropical Forest Soil	AAVHPMRIRIHLDNGPLEKQSIAETYQGKMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0126372_102655051	3300010360	Tropical Forest Soil	RCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0126372_106593212	3300010360	Tropical Forest Soil	VPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT*
Ga0126377_100718933	3300010362	Tropical Forest Soil	VPQYDIYVRCVECDAVHPMRIRIHLDNGPMEKQSIAETFRGKTRPPQLQAIEGHKTLCLKTGRMFIQQDHNQIFLVPSYSSERIT*
Ga0137313_10459352	3300011403	Soil	VPQYDIYALCTECGAVHPMRLRIHLDEGPVEKQSMSEIYRGKTRPPQLQALDGHKVLCLKTGRMFVQESHEQVFLVPSYSSQRGL*
Ga0137422_10451051	3300011416	Soil	DVDRPSTIRHSSLNNGRGGLTVPQYDIYALCTECGAVHPMRIRIHLDEGPVEKQSMSEIYRGKTRPPQLQALDGHKVLCLKTGRMFVQESHEQVFLVPSYSSQRGL*
Ga0137319_11280402	3300012167	Soil	MRIRIHLDEGPVEKQSMSEIYRGKTRPPQLQALDGHKVLCLKTGRMFVQESHEQVFLVPSYSSQRCL*
Ga0137374_108172561	3300012204	Vadose Zone Soil	MGLRLYLSEPAQNRLNVLLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
Ga0137367_101445742	3300012353	Vadose Zone Soil	MMGLRLYLSEPAQNRLNVLLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT*
Ga0157316_10720211	3300012510	Arabidopsis Rhizosphere	VPQYDIFVRCIECGAVHPMRIRVHLDNGPLEKQSIAETFPGKMRPPQLQAIDGHKTLCLKTGRMFVQENHDHIFLVPSYSSERIP*
Ga0137358_100145783	3300012582	Vadose Zone Soil	MRIRVHLDDGPVEKQSITETYRGKTRPPQLQAIDGHKTLCLKTGRMFVQGNLDHIFLVPSYSSERIT*
Ga0137397_101296492	3300012685	Vadose Zone Soil	MLTRAYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENQDHIFLVPSYSSERIT*
Ga0126375_111219392	3300012948	Tropical Forest Soil	MGLMLTGPHLCATVGLEGGLPVPQYDIYVRCVECDAVHPMRIRIHLDNGPMEKQSIGETFRGRMRPPQLPAIEGHKTLCLKTGRMFIQQDHNQIFLVPSYSSERIT*
Ga0164298_107070852	3300012955	Soil	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLQTGRMFIQENLDQIFLVPSYSSERIT*
Ga0075325_10277751	3300014270	Natural And Restored Wetlands	VPQYDIYALCTECGSVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQRGL*
Ga0075327_11220421	3300014272	Natural And Restored Wetlands	VPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQECHDQVFLVPSYSSQRGL*
Ga0075342_10343192	3300014320	Natural And Restored Wetlands	VPQYDIYAMCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQRGL*
Ga0137405_12928741	3300015053	Vadose Zone Soil	MLTSPYLCAKVGLDKGGLPVAQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENLDHIFLVPSYSSERIT*
Ga0182037_107399551	3300016404	Soil	MRHSMKQGGLIVPQYDIYVRCSECGAVHPMRIRVHLDDGPVEKQSITQTYRGKPRPPQLQAIDGHKTLCLKTGRMFVQENLDQIFLVPSYSSERIT
Ga0184608_100585992	3300018028	Groundwater Sediment	VPQYDIYVRCVECGAVHPMRIRIHLENGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENRDHIFLVPSYSSERIT
Ga0184626_100113374	3300018053	Groundwater Sediment	MRQSRINKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGKTRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0184635_100279951	3300018072	Groundwater Sediment	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLDKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENRDHIFLVPSYSSERIT
Ga0184635_100791172	3300018072	Groundwater Sediment	VILTSPCLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLENGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENRDHIFLVPSYSSERIT
Ga0184609_101604702	3300018076	Groundwater Sediment	MLTSPHLCAKVGLNKGGLPVPQYDIYVRCVECGAVHPMRIRIHLENGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0184625_102524792	3300018081	Groundwater Sediment	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0184625_104841311	3300018081	Groundwater Sediment	PMRIRIHLDNGPLEKQSIAESYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0184629_100842221	3300018084	Groundwater Sediment	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLDKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0187774_110025722	3300018089	Tropical Peatland	YVRCKECGAVHPMRIRIHLDDGPVEKQSITETYRGKARPPQLQAIDGHKTLCLKTGRMFVQENLDQIFLVPSYSAERIT
Ga0210378_102377392	3300021073	Groundwater Sediment	MLTSPHLCAKVGLNKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGKTRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0210113_10525422	3300025796	Natural And Restored Wetlands	VPQYDIYALCTECGAVHPMRIRIHLDEGPMEKQSISEIYRGKTRPPQLQAVDGHKVLCLKTGRMFVQESHDQVFLVPSYSSQRGL
Ga0209879_10286332	3300027056	Groundwater Sand	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGKTRPPQLQALDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0208685_10005924	3300027513	Soil	VPQYDIYALCTECGAVHPMRIRIHLDEGPVEKQSMSEIYRGKTRPPQLQALDGHKVLCLKTGRMFVQESHEQVFLVPSYSSQRGL
Ga0209874_10005872	3300027577	Groundwater Sand	VPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGKTRPPQLQALDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0209466_10005546	3300027646	Tropical Forest Soil	VPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT
Ga0209799_10003368	3300027654	Tropical Forest Soil	VPVPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQI
Ga0209799_10392252	3300027654	Tropical Forest Soil	CAAVHPMRIRIHLDNGPLEKQSIAETYQGRIRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT
Ga0209814_1000049512	3300027873	Populus Rhizosphere	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT
Ga0209465_100365552	3300027874	Tropical Forest Soil	VPQYDIYVRCVECAAVHPMRIRIHLDNGPLEKQSIAETYQGRMRPPQLQAIEGHKTLCLKTGRMFVQENHNQIFLVPSYSSERIT
Ga0207428_101086992	3300027907	Populus Rhizosphere	MLTSPYLCAKVGLEKGGLAVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT
Ga0209382_100113983	3300027909	Populus Rhizosphere	VPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQQNHDHIFLVPSYSSERIT
Ga0299907_107634581	3300030006	Soil	MPQYEIHVLCSECGAEHPMRVRLHLDDGPAEKRSIGETYKGKTQPPQLLAIGGHKTLCLKTGRMFVQEDDERIFLVPR
Ga0307469_100094933	3300031720	Hardwood Forest Soil	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENLDHIFLVPSYSSERIT
Ga0307468_1004065942	3300031740	Hardwood Forest Soil	MRHSRIRKGGPPVPQYDIYVRCVECAAVHPMRIRIHLDNGPVEKQSIAETYQGRTRPPQLQAIEGHKTLCLKTGRMFIQENHNQIFLVPSYSSERIT
Ga0306918_113715542	3300031744	Soil	MRHSKKQGGLIVPQYDIYVRCSECGAVHPMRIRVHLDDGPVEKQSITQTYRGKPRPPQLQAIDGHKTLCLKTGRMFVQENLDQIFL
Ga0306925_118063042	3300031890	Soil	CGAVHPMRIRVHLDDGPVEKQSITQTYRGKPRPPQLQAIDGHKTLCLKTGRMFVQENLDQIFLVPSYSSERIT
Ga0310912_105898002	3300031941	Soil	MRHSKKQGGLIVPQYDIYVRCSECGAVHPMRIRVHLDDGPVEKQSITQTYRGKPRPPQLQAIDGHKTLCLKTGRMFVQENLDQIFLVPSYSSERIT
Ga0310910_106999251	3300031946	Soil	MLTDPRLCATVGLEQGGLIVPQYDIYVRCSECGAVHPMRIRVHLDDGPVEKQSITQTYRGKPRPPQLQAIDGHKTLCLKTGRMFVQENLDQIFLVPSYSSERIT
Ga0307471_1014012312	3300032180	Hardwood Forest Soil	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECSAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENLDHIFLVPSYSSERIT
Ga0307471_1033836211	3300032180	Hardwood Forest Soil	MRHSRIRKGGLPVPQYDIYVRCVECDAVHPMRIRIHLDNGPVEKQNIAETYRGRTRPPQLQAIEGHKTLCLKTGRMFIQEDQSQIFLVPSYSSERIT
Ga0247830_100458112	3300033551	Soil	MPQYEIHVLCSECGAEHPMRVRLHLDDGPADKRSISETYKGRNQPPQLLAVGGHKTLCLKTGRMFVQENEDQIFLIPR
Ga0364945_0002114_1_303	3300034115	Sediment	PHLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAESYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLLPSYSSERIT
Ga0364929_0011088_214_528	3300034149	Sediment	MLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAESYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0364933_152760_105_419	3300034150	Sediment	MLTSPHLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLDKQSIAESYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDHIFLVPSYSSERIT
Ga0364943_0001175_1784_2041	3300034354	Sediment	MPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAESYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDYIFLVPSYSSERIT
Ga0364941_013212_302_619	3300034417	Sediment	MMLTSPYLCAKVGLDKGGLPVPQYDIYVRCVECGAVHPMRIRIHLDNGPLEKQSIAETYPGATRPPQLQAIDGHKTLCLKTGRMFIQENHDYIFLVPSYSSERIT
Ga0373948_0148560_185_442	3300034817	Rhizosphere Soil	MPQYDIFVRCIECGAVHPMRIRVHLDNGPLEKQSIAETFPGKMRPPQLQAIDGHKTLCLKTGRMFVQENHDHIFLVPSYSSERIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083021

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences